Citrus Sinensis ID: 042492

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCPTSL
Secondary Structure (PSIPRED)
cEEEcccccccEEcccccccccccccccccccccccEEEcccccccccHHHHccccccccccccccHHHHHHHHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEcccHccEEccccccccHcHccHHEEcccccccEEEEEEEccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
liihcdikphnilmdEFWTAKIsdfglakllmpdqtrtftlirgtrgymapewskntpisvkANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEgitdisippcptsl
Flexible Loop (DISEMBL)
liihcdikphniLMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLegitdisippcptsl
Low Complexity Region (SEG)
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCPTSL
Disordered region (IsUnstruct)
*IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISI*******
Disordered Region (DISOPRED)
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCP***
Disordered Region (DISEMBL)
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCPTSL
Disordered Region (DISPRO)
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCPTSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWCSVVMMLEGITDISIPPCPTSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	137	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	yes	no	0.978	0.161	0.468	5e-35
Q9XID3	829	G-type lectin S-receptor-	no	no	0.970	0.160	0.409	5e-29
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.956	0.150	0.397	2e-27
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.992	0.165	0.385	6e-26
O64477	828	G-type lectin S-receptor-	no	no	0.992	0.164	0.371	8e-23
Q39203	797	G-type lectin S-receptor-	no	no	0.897	0.154	0.381	4e-22
O65238	872	G-type lectin S-receptor-	no	no	0.708	0.111	0.485	5e-22
Q94C25	452	Probable receptor-like pr	no	no	0.540	0.163	0.554	3e-19
P17801	817	Putative receptor protein	N/A	no	0.540	0.090	0.533	2e-18
Q9XEC8	648	Cysteine-rich receptor-li	no	no	0.948	0.200	0.354	2e-16

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 26/160 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NIL+DE++T +ISDFGLAKLL+ +QT T T IRGT+GY+APEW +N+PI+ 
Sbjct: 653 IIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITS 712

Query: 62  KANVFNYGVVLLEI-----------EIVLINWAYKCFIDREFNKLVHD--EEVNK-KTLE 107
           K +V++YGV+LLEI            ++LINWAY CF       L  D  E +N  +T+E
Sbjct: 713 KVDVYSYGVMLLEIVCCKKAVDLEDNVILINWAYDCFRQGRLEDLTEDDSEAMNDMETVE 772

Query: 108 NMIKVRLWC------------SVVMMLEGITDISIPPCPT 135
             +K+ +WC            +V  MLEG+  +  PP P+
Sbjct: 773 RYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNPS 812

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  126 bits (316), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 70/171 (40%), Positives = 95/171 (55%), Gaps = 38/171 (22%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPIS 60
           I+HCDIKP NIL+D+ + AK+SDFGLAKLL P   R   + +RGTRGY+APEW  N PI+
Sbjct: 604 IVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPIT 663

Query: 61  VKANVFNYGVVLLEIEIVLIN--------------WAY--------KCFIDREFNKLVHD 98
            K++V++YG+VLLE+     N              WAY        K  +D    +L  D
Sbjct: 664 SKSDVYSYGMVLLELVSGKRNFDVSEKTNHKKFSIWAYEEFEKGNTKAILD---TRLSED 720

Query: 99  EEVNKKTLENMIKVRLWC------------SVVMMLEGITDISIPPCPTSL 137
           + V+ + +  M+K   WC             VV MLEGIT+I  P CP ++
Sbjct: 721 QTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNPLCPKTI 771

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 40/171 (23%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NIL+D+ +  K+SDFGLAK++  + +   T+IRGTRGY+APEW  N PI+V
Sbjct: 652 IIHCDIKPENILLDDNFCPKVSDFGLAKMMGREHSHVVTMIRGTRGYLAPEWVSNRPITV 711

Query: 62  KANVFNYGVVLLEI--------------EIVLINWAYKCF--------IDREFNKLVHDE 99
           KA+V++YG++LLEI              +     WAYK          +D+    +  +E
Sbjct: 712 KADVYSYGMLLLEIVGGRRNLDMSYDAEDFFYPGWAYKELTNGTSLKAVDKRLQGVAEEE 771

Query: 100 EVNKKTLENMIKVRLWC------------SVVMMLEGITD-ISIPPCPTSL 137
           EV K      +KV  WC             VV +LEG +D I++PP P ++
Sbjct: 772 EVVKA-----LKVAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPPMPQTI 817

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  115 bits (289), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 30/166 (18%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+HCDIKP NIL+D+ + AK+SDFGLAKL+  +Q+  FT +RGTRGY+APEW  N  IS 
Sbjct: 614 IVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISE 673

Query: 62  KANVFNYGVVLLEIEIVLINW-----AYKC-FIDREFNKL------------VHDEEVNK 103
           K++V++YG+VLLE+     N+     + KC F    F K+            + + +V  
Sbjct: 674 KSDVYSYGMVLLELIGGRKNYDPSETSEKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTD 733

Query: 104 KTLENMIKVRLWC------------SVVMMLEGITDISIPPCPTSL 137
           + ++  +K  LWC             VV MLEG+  +  PP  +++
Sbjct: 734 ERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTM 779

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  105 bits (262), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 31/167 (18%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NIL+D  +  K++DFGLAKL+  D +R  T +RGTRGY+APEW     I+ 
Sbjct: 615 IIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITA 674

Query: 62  KANVFNYGVVLLEI------------EIVLI--NWAYKCFI-DREFNKLV----HDEEVN 102
           KA+V++YG++L E+            E V    +WA      D +   LV      + V+
Sbjct: 675 KADVYSYGMMLFELVSGRRNTEQSENEKVRFFPSWAATILTKDGDIRSLVDPRLEGDAVD 734

Query: 103 KKTLENMIKVRLWC------------SVVMMLEGITDISIPPCPTSL 137
            + +    KV  WC             VV +LEG+ +++ PP P S+
Sbjct: 735 IEEVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPFPRSI 781

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score =  103 bits (256), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 61/160 (38%), Positives = 83/160 (51%), Gaps = 37/160 (23%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NIL+D  + AK+SDFGLAKLL  D +R    +RGT GY+APEW    PI+ 
Sbjct: 581 IIHCDIKPENILLDSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITT 640

Query: 62  KANVFNYGVVLLEI----EIVLIN------------------WAYKCFIDREFNKLVHDE 99
           KA+V+++G+ LLE+      V++N                  WA +  I    + +V   
Sbjct: 641 KADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSR 700

Query: 100 ---EVNKKTLENMIKVRLWC------------SVVMMLEG 124
              E N + +  M  V +WC            +VV MLEG
Sbjct: 701 LNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKMLEG 740

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  102 bits (255), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 4/101 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCD+KP NIL+ + +  KISDFGL+KLL  +++  FT +RGTRGY+APEW  N  IS 
Sbjct: 635 IIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISE 694

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVN 102
           KA+V++YG+VLLE    L++    C      N +  D   N
Sbjct: 695 KADVYSYGMVLLE----LVSGRKNCSFRSRSNSVTEDNNQN 731

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q94C25|Y5005_ARATH Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/74 (55%), Positives = 58/74 (78%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL+DE + A ++DFGL+KL+  D++R  T IRGTRGY+APEW     IS 
Sbjct: 232 ILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISE 291

Query: 62  KANVFNYGVVLLEI 75
           K++V++YG+VLLE+
Sbjct: 292 KSDVYSYGIVLLEM 305

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 56/75 (74%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +IHCD+KP NIL+D+ +  KI+DFGL KLL     T+  + +RGT GY+APEW  + PI+
Sbjct: 654 VIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPIT 713

Query: 61  VKANVFNYGVVLLEI 75
            K +V++YGVVLLE+
Sbjct: 714 AKVDVYSYGVVLLEL 728

Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XEC8|CRK38_ARATH Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=3 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/155 (35%), Positives = 83/155 (53%), Gaps = 25/155 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-IRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NIL+D +   K++DFG+A+L   DQTR  T  + GT GYMAPE+ +N   S
Sbjct: 460 IIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGYMAPEYVRNRTFS 519

Query: 61  VKANVFNYGVVLLEI-----------EIVLINWAYKCFIDREFNKLVHDEEVNKKTLENM 109
           VK +V+++GVVLLE+            + L  +A+KC++  E   ++       ++ E M
Sbjct: 520 VKTDVYSFGVVLLEMITGRSNKNYFEALGLPAYAWKCWVAGEAASIIDHVLSRSRSNEIM 579

Query: 110 --IKVRLWC-----------SVVMMLEGITDISIP 131
             I + L C           S+V+   G   I+IP
Sbjct: 580 RFIHIGLLCVQENVSKRPTMSLVIQWLGSETIAIP 614

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
359477052	767	PREDICTED: G-type lectin S-receptor-like	0.985	0.176	0.617	2e-52
225431565	791	PREDICTED: G-type lectin S-receptor-like	0.985	0.170	0.617	4e-52
147867430	930	hypothetical protein VITISV_038238 [Viti	0.985	0.145	0.617	7e-52
359477046	798	PREDICTED: G-type lectin S-receptor-like	0.985	0.169	0.623	2e-51
357478041	854	Receptor like kinase [Medicago truncatul	0.985	0.158	0.617	7e-51
357478045	928	Kinase-like protein [Medicago truncatula	0.985	0.145	0.592	2e-48
224116044	313	predicted protein [Populus trichocarpa]	0.985	0.431	0.592	4e-48
224105693	313	predicted protein [Populus trichocarpa]	0.985	0.431	0.586	9e-48
356546166	810	PREDICTED: G-type lectin S-receptor-like	0.985	0.166	0.615	8e-47
359477048	792	PREDICTED: G-type lectin S-receptor-like	0.992	0.171	0.539	2e-43

>gi|359477052|ref|XP_002276297.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/162 (61%), Positives = 122/162 (75%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMD+FWTAKISDFGLAKLLMPDQTRTFT +RGTRGY+APEW +N PISV
Sbjct: 603 IIHCDIKPQNILMDDFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQQNIPISV 662

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YG+VLLE+               EIVL NWAYKCF+  E +KL+  EEV +K+L
Sbjct: 663 KADVYSYGIVLLELVCCRRNLEVNVSEPEEIVLSNWAYKCFVAGELHKLLGGEEVERKSL 722

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+K+ LWC            S+V+MLEGIT+I++PPCPT+
Sbjct: 723 EQMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCPTT 764

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431565|ref|XP_002276127.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 100/162 (61%), Positives = 121/162 (74%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMD+FWTAKISDFGLAKLLMPDQTRTFT +RGTRGY+APEW +N PISV
Sbjct: 627 IIHCDIKPQNILMDDFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQQNIPISV 686

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YG+VLLE+               EIVL NWAYKCF+  E  KL+  EEV +K+L
Sbjct: 687 KADVYSYGIVLLELVCCRRNLEVNVSKPEEIVLSNWAYKCFVAGELYKLLGGEEVERKSL 746

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+K+ LWC            S+V+MLEGIT+I++PPCPT+
Sbjct: 747 EEMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCPTT 788

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147867430|emb|CAN78998.1| hypothetical protein VITISV_038238 [Vitis vinifera]

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 100/162 (61%), Positives = 121/162 (74%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMD+FWTAKISDFGLAKLLMPDQTRTFT +RGTRGY+APEW +N PISV
Sbjct: 766 IIHCDIKPQNILMDDFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQQNIPISV 825

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YG+VLLE+               EIVL NWAYKCF+  E  KL+  EEV +K+L
Sbjct: 826 KADVYSYGIVLLELVCCRRNLEVNVSKPEEIVLSNWAYKCFVAGELYKLLGGEEVERKSL 885

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+K+ LWC            S+V+MLEGIT+I++PPCPT+
Sbjct: 886 EEMVKLGLWCIQDEPALRPSIKSIVLMLEGITEIAVPPCPTT 927

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477046|ref|XP_002275786.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMDEF  AKISDFGLAKLLMPDQTRTFT +RGTRGY+APEW +NTPISV
Sbjct: 634 IIHCDIKPQNILMDEFLNAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWQRNTPISV 693

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA++++YG+VLLEI               EI+L NW Y+C + RE +KLV DE  +KKTL
Sbjct: 694 KADIYSYGIVLLEIVCCRKNMEVQVKNPEEIILSNWVYQCMVSRELDKLVADEVADKKTL 753

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+KV LWC            SVV++LEGITDI +PPCPT+
Sbjct: 754 ERMVKVGLWCIQDEPALRPSMKSVVLILEGITDIVVPPCPTT 795

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478041|ref|XP_003609306.1| Receptor like kinase [Medicago truncatula] gi|357478087|ref|XP_003609329.1| Receptor like kinase [Medicago truncatula] gi|355510361|gb|AES91503.1| Receptor like kinase [Medicago truncatula] gi|355510384|gb|AES91526.1| Receptor like kinase [Medicago truncatula]

 Score =  204 bits (520), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 100/162 (61%), Positives = 117/162 (72%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCD+KP NILMD+FWTAKISDFGLAKLLMPDQTRTFT++RGTRGYMAPEW+KN  ISV
Sbjct: 646 IIHCDLKPQNILMDKFWTAKISDFGLAKLLMPDQTRTFTMVRGTRGYMAPEWNKNVAISV 705

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           K +V++YG+VLLEI               EI+L  W YKCFI  + NKLV  E ++K  +
Sbjct: 706 KTDVYSYGIVLLEILCCRRNLDVNVLEPEEILLAGWTYKCFIAGDVNKLVPSEAIDKNVM 765

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           ENM+KV LWC             VV+MLEGITDI+IPPCP S
Sbjct: 766 ENMVKVALWCIQDDPFLRPTMKGVVLMLEGITDIAIPPCPNS 807

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357478045|ref|XP_003609308.1| Kinase-like protein [Medicago truncatula] gi|357478091|ref|XP_003609331.1| Kinase-like protein [Medicago truncatula] gi|355510363|gb|AES91505.1| Kinase-like protein [Medicago truncatula] gi|355510386|gb|AES91528.1| Kinase-like protein [Medicago truncatula]

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 115/162 (70%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMDEFWTAKISDFGLAKLLMPDQTRTFT++RGTRGYMAPEW+ N PIS+
Sbjct: 646 IIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTVVRGTRGYMAPEWNMNVPISL 705

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YG++L EI               EI+L  WAYKC +  + N LV  E ++   +
Sbjct: 706 KADVYSYGIMLFEILCCRRNLDVNVLEPEEILLSGWAYKCLVAGQVNNLVPWEVIDNNVM 765

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           ENM+KV LWC             VV+MLEG+TDI+IPPCP S
Sbjct: 766 ENMVKVALWCIQDDPFLRPTMKGVVLMLEGVTDIAIPPCPDS 807

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116044|ref|XP_002332034.1| predicted protein [Populus trichocarpa] gi|222875259|gb|EEF12390.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 118/162 (72%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMD+FW AKISDFGLAKLL+PDQTRTFT++RGTRGY+APEW KNTPISV
Sbjct: 149 IIHCDIKPQNILMDDFWNAKISDFGLAKLLVPDQTRTFTIVRGTRGYLAPEWHKNTPISV 208

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YGV+LLEI               E+ L NWAY+  ++RE +KL   E+V+ + L
Sbjct: 209 KADVYSYGVMLLEIVFCRRNIETNVSRPEEVQLSNWAYELLVERELDKLDLGEDVDLQNL 268

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+ V +WC            SVV+MLEGITD+S+PP PTS
Sbjct: 269 EKMVMVGIWCIQDEPGIRPSMKSVVLMLEGITDVSVPPHPTS 310

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105693|ref|XP_002333784.1| predicted protein [Populus trichocarpa] gi|222838485|gb|EEE76850.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (493), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 95/162 (58%), Positives = 117/162 (72%), Gaps = 27/162 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIHCDIKP NILMD+FW AKISDFGLAKLL+PDQTRTFT++RGTRGY+APEW KNTPISV
Sbjct: 149 IIHCDIKPQNILMDDFWNAKISDFGLAKLLVPDQTRTFTMVRGTRGYLAPEWHKNTPISV 208

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+V++YGV+LLEI               E+ L NWAY+  ++RE +KL   E+V+ +  
Sbjct: 209 KADVYSYGVMLLEIVFCRRNIETNVSRPEEVQLSNWAYELLVERELDKLDLGEDVDLQNF 268

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           E M+ V +WC            SVV+MLEGITD+S+PP PTS
Sbjct: 269 EKMVMVGIWCIQDEPGIRPSMKSVVLMLEGITDVSVPPHPTS 310

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546166|ref|XP_003541502.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]

 Score =  191 bits (485), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 101/164 (61%), Positives = 115/164 (70%), Gaps = 29/164 (17%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPIS 60
           IIHCDIKP NILMDEFWTAKISDFGLAKLLMPDQTRT T  RGTRGY+APEW K N PIS
Sbjct: 644 IIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTITGARGTRGYVAPEWDKLNIPIS 703

Query: 61  VKANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEV-NKK 104
           VK +V++YG+VLLEI                 +L NWAYKCF+  + NKL   E V NK 
Sbjct: 704 VKVDVYSYGIVLLEILCCRRNIEVHVSEPEAALLSNWAYKCFVSGQLNKLFLWESVDNKT 763

Query: 105 TLENMIKVRLWC------------SVVMMLEGITDISIPPCPTS 136
           ++EN++KV LWC            SVV+MLEGITDI+IPPCP S
Sbjct: 764 SVENIVKVALWCIQDEPFLRPTMKSVVLMLEGITDIAIPPCPNS 807

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477048|ref|XP_002275811.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 88/163 (53%), Positives = 107/163 (65%), Gaps = 27/163 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+HCDIKP NILMD+ WTAKISDFG +KLLMP+Q    T IRGT GY APEW KNT ISV
Sbjct: 630 IVHCDIKPQNILMDDAWTAKISDFGFSKLLMPNQEGIVTGIRGTAGYSAPEWHKNTLISV 689

Query: 62  KANVFNYGVVLLEI---------------EIVLINWAYKCFIDREFNKLVHDEEVNKKTL 106
           KA+++++GVVLLEI               EI+L +W Y C + RE +KLV DE+V  K+L
Sbjct: 690 KADIYSFGVVLLEIVCCRRSIEVKVSTADEIILSSWVYGCLVARELDKLVGDEQVEFKSL 749

Query: 107 ENMIKVRLWC------------SVVMMLEGITDISIPPCPTSL 137
           E M+KV LWC            +V++MLEG  DI  PP PT L
Sbjct: 750 ERMVKVGLWCVQDDPALRPSMKNVILMLEGTVDIPFPPSPTPL 792

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.540	0.090	0.608	6.6e-23
TAIR|locus:2147635	452	AT5G20050 [Arabidopsis thalian	0.540	0.163	0.554	5.5e-21
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.540	0.089	0.554	9.5e-21
TAIR|locus:2182603	872	AT5G35370 [Arabidopsis thalian	0.708	0.111	0.485	6.2e-20
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.540	0.089	0.6	7.3e-20
TAIR|locus:2176737	665	PR5K "PR5-like receptor kinase	0.540	0.111	0.545	2.8e-17
TAIR|locus:2033577	425	AT1G70740 [Arabidopsis thalian	0.540	0.174	0.540	4.8e-16
TAIR|locus:2141862	853	AT4G18250 [Arabidopsis thalian	0.540	0.086	0.532	8.3e-16
TAIR|locus:2013021	625	SERK1 "somatic embryogenesis r	0.540	0.118	0.486	2.8e-15
TAIR|locus:2020583	799	AT1G70250 [Arabidopsis thalian	0.540	0.092	0.506	3.1e-15

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
 Identities = 45/74 (60%), Positives = 61/74 (82%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             I+HCDIKP NIL+D+ + AK+SDFGLAKL+  +Q+  FT +RGTRGY+APEW  N  IS 
Sbjct:   614 IVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISE 673

Query:    62 KANVFNYGVVLLEI 75
             K++V++YG+VLLE+
Sbjct:   674 KSDVYSYGMVLLEL 687

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2147635 AT5G20050 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 41/74 (55%), Positives = 58/74 (78%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             I+H D+KP NIL+DE + A ++DFGL+KL+  D++R  T IRGTRGY+APEW     IS 
Sbjct:   232 ILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGYLAPEWLLEHGISE 291

Query:    62 KANVFNYGVVLLEI 75
             K++V++YG+VLLE+
Sbjct:   292 KSDVYSYGIVLLEM 305

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 9.5e-21, Sum P(2) = 9.5e-21
 Identities = 41/74 (55%), Positives = 56/74 (75%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             IIHCDIKP NIL+D  +  K++DFGLAKL+  D +R  T +RGTRGY+APEW     I+ 
Sbjct:   615 IIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITA 674

Query:    62 KANVFNYGVVLLEI 75
             KA+V++YG++L E+
Sbjct:   675 KADVYSYGMMLFEL 688

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 6.2e-20, P = 6.2e-20
 Identities = 49/101 (48%), Positives = 66/101 (65%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             IIHCD+KP NIL+ + +  KISDFGL+KLL  +++  FT +RGTRGY+APEW  N  IS 
Sbjct:   635 IIHCDVKPENILLHDHFQPKISDFGLSKLLNQEESSLFTTMRGTRGYLAPEWITNAAISE 694

Query:    62 KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVN 102
             KA+V++YG+VLLE    L++    C      N +  D   N
Sbjct:   695 KADVYSYGMVLLE----LVSGRKNCSFRSRSNSVTEDNNQN 731

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 7.3e-20, P = 7.3e-20
 Identities = 45/75 (60%), Positives = 60/75 (80%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPIS 60
             I+HCDIKP NIL+D+ + AK+SDFGLAKLL P   R   + +RGTRGY+APEW  N PI+
Sbjct:   604 IVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPIT 663

Query:    61 VKANVFNYGVVLLEI 75
              K++V++YG+VLLE+
Sbjct:   664 SKSDVYSYGMVLLEL 678

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2176737 PR5K "PR5-like receptor kinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
 Identities = 42/77 (54%), Positives = 56/77 (72%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-IRGTRGYMAPE-WSKNT-P 58
             I+H DIKP NILMDE    KISDFGLAKL    ++    L +RGT GY+APE +SKN   
Sbjct:   451 IVHFDIKPQNILMDENLCPKISDFGLAKLCKNKESIISMLHMRGTFGYIAPEMFSKNFGA 510

Query:    59 ISVKANVFNYGVVLLEI 75
             +S K++V++YG+V+LE+
Sbjct:   511 VSHKSDVYSYGMVVLEM 527

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0009620 "response to fungus" evidence=ISS

TAIR|locus:2033577 AT1G70740 [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 4.8e-16, P = 4.8e-16
 Identities = 40/74 (54%), Positives = 54/74 (72%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             IIH DIK  NIL+DE W  KI+DFG+A+L   D T   T + GT GYMAPE+  +  +SV
Sbjct:   183 IIHRDIKAGNILLDEKWVPKIADFGMARLYQEDVTHVNTRVAGTNGYMAPEYVMHGVLSV 242

Query:    62 KANVFNYGVVLLEI 75
             KA+VF++GV++LE+
Sbjct:   243 KADVFSFGVLVLEL 256

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141862 AT4G18250 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 8.3e-16, Sum P(2) = 8.3e-16
 Identities = 41/77 (53%), Positives = 55/77 (71%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-IRGTRGYMAPE-WSKNTP- 58
             I+H DIKP NIL+DE    KISDFGLAKL    ++    L  RGT GY+APE +SKN   
Sbjct:   640 IVHFDIKPQNILIDEDLCPKISDFGLAKLCKKKESIISMLDARGTVGYIAPEMFSKNYGG 699

Query:    59 ISVKANVFNYGVVLLEI 75
             +S K++V++YG+V+LE+
Sbjct:   700 VSHKSDVYSYGMVVLEM 716

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2013021 SERK1 "somatic embryogenesis receptor-like kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
 Identities = 36/74 (48%), Positives = 49/74 (66%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
             IIH D+K  NIL+DE + A + DFGLAKL+    T   T +RGT G++APE+      S 
Sbjct:   425 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 484

Query:    62 KANVFNYGVVLLEI 75
             K +VF YG++LLE+
Sbjct:   485 KTDVFGYGIMLLEL 498

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0042802 "identical protein binding" evidence=IPI

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=TAS

GO:0009556 "microsporogenesis" evidence=IGI;IMP

GO:0010152 "pollen maturation" evidence=IMP

GO:0043234 "protein complex" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI;IMP

GO:0033612 "receptor serine/threonine kinase binding" evidence=IPI

GO:0007030 "Golgi organization" evidence=IGI

GO:0010227 "floral organ abscission" evidence=IGI

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0007062 "sister chromatid cohesion" evidence=RCA

GO:0009880 "embryonic pattern specification" evidence=RCA

GO:0010072 "primary shoot apical meristem specification" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010431 "seed maturation" evidence=RCA

GO:0016310 "phosphorylation" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045595 "regulation of cell differentiation" evidence=RCA

GO:0051301 "cell division" evidence=RCA

TAIR|locus:2020583 AT1G70250 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
 Identities = 39/77 (50%), Positives = 55/77 (71%)

Query:     2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-IRGTRGYMAPE-WSKNTP- 58
             I+H DIKP NIL+D     KISDFGLAKL   +++    L  RGT GY+APE +S+N   
Sbjct:   579 IVHFDIKPQNILIDGDLCPKISDFGLAKLCKNNESIISMLHARGTIGYIAPEVFSQNFGG 638

Query:    59 ISVKANVFNYGVVLLEI 75
             +S K++V++YG+V+LE+
Sbjct:   639 VSHKSDVYSYGMVVLEM 655

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	137
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-19
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-18
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-18
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-14
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-14
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-13
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-13
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-12
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-12
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-11
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-11
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	5e-11
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-11
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-11
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	8e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-10
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-10
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-10
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-10
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	6e-10
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-10
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	8e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	4e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-09
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	6e-09
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-09
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-09
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-08
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-08
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-08
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-08
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-08
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-08
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	5e-08
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	6e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	6e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	7e-08
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	7e-08
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-08
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-07
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-07
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-07
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-07
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-07
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-07
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-07
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-07
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-07
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-07
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-07
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-07
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	3e-07
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-07
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-07
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-07
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	4e-07
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-07
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	5e-07
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	5e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-07
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	7e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-07
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	9e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	9e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	1e-06
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-06
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-06
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	5e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	5e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	5e-06
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	6e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-06
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-06
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	7e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	7e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-06
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	7e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	9e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	9e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-05
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	1e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	3e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	5e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	6e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-05
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	7e-05
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-04
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-04
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-04
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-04
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-04
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	2e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-04
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-04
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-04
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	5e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	6e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	6e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	6e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	6e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	6e-04
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	7e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	8e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	9e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.001
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.001
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.001
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.001
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	0.001
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.001
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	0.001
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	0.001
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.001
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.001
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.001
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.002
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.002
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.002
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.002
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.002
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.003
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.003
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	0.003
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.003
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.003
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.003
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.003
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.003
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.003
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.004
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	0.004
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	0.004
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 80.4 bits (199), Expect = 1e-19
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 2   IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
           IIH D+KP NIL+D      K++DFGL+KLL          I GT  YMAPE        
Sbjct: 113 IIHRDLKPENILLDSDNGKVKLADFGLSKLL-TSDKSLLKTIVGTPAYMAPEVLLGKGYY 171

Query: 60  SVKANVFNYGVVLLEIEIVLINWAYKCF 87
           S K+++++ GV+L E+   L +   K  
Sbjct: 172 SEKSDIWSLGVILYELP-ELKDLIRKML 198

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 77.7 bits (192), Expect = 3e-18
 Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-SKNTPIS 60
           IIH D+KP NIL+DE    KI+DFGLAK L+   +   T   GT  YMAPE         
Sbjct: 119 IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSS-LTTFVGTPWYMAPEVLLGGNGYG 177

Query: 61  VKANVFNYGVVLLE 74
            K +V++ GV+L E
Sbjct: 178 PKVDVWSLGVILYE 191

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 76.8 bits (190), Expect = 4e-18
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL+DE    K++DFGLA+ L P +  T T + GT  YMAPE         
Sbjct: 118 IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLT-TFV-GTPEYMAPEVLLGKGYGK 175

Query: 62  KANVFNYGVVLLEI 75
             ++++ GV+L E+
Sbjct: 176 AVDIWSLGVILYEL 189

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 68.7 bits (169), Expect = 5e-15
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL----MPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I+H DIK  NIL+D     K++DFG AK L      + T +   +RGT  +MAPE  +  
Sbjct: 122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGS---VRGTPYWMAPEVIRGE 178

Query: 58  PISVKANVFNYGVVLLE 74
                A++++ G  ++E
Sbjct: 179 EYGRAADIWSLGCTVIE 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH DIKP NIL+      K+ DFG++  L+     TFT   GT  YMAPE  +  P S+
Sbjct: 126 IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFT---GTSFYMAPERIQGKPYSI 182

Query: 62  KANVFNYGVVLLEI 75
            ++V++ G+ LLE+
Sbjct: 183 TSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP NI +      K+ DFG++K+L        T++ GT  Y++PE  +N P + 
Sbjct: 124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVV-GTPYYLSPELCQNKPYNY 182

Query: 62  KANVFNYGVVLLE 74
           K+++++ G VL E
Sbjct: 183 KSDIWSLGCVLYE 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 5e-13
 Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NIL+D     K++DFGLAK L  + +RT T   GT  Y+APE
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC-GTPEYLAPE 163

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 63.1 bits (154), Expect = 6e-13
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+KP NIL++     K+ DFG++  L+    +TF    GT  YMAPE  +    SV
Sbjct: 122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV---GTSSYMAPERIQGNDYSV 178

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G+ L+E+
Sbjct: 179 KSDIWSLGLSLIEL 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH DIKP NIL+DE     I+DF +A  + PD   T T   GT GYMAPE
Sbjct: 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTST--SGTPGYMAPE 169

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 61.1 bits (149), Expect = 3e-12
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH DIKP N+L++     KI+DFG++K+L     +  T + GT  YM+PE  +    S 
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERIQGESYSY 179

Query: 62  KANVFNYGVVLLE 74
            A++++ G+ LLE
Sbjct: 180 AADIWSLGLTLLE 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP NI +D     K+ DFGLAK+L  D +   T + GT  YM+PE   +     
Sbjct: 131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV-GTPYYMSPEQLNHMSYDE 189

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G ++ E+
Sbjct: 190 KSDIWSLGCLIYEL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPIS 60
           IIH DIK  NIL+      K+ DFGL+  L   + R T     GT  +MAPE     P  
Sbjct: 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV---GTPYWMAPEVINGKPYD 175

Query: 61  VKANVFNYGVVLLE 74
            KA++++ G+  +E
Sbjct: 176 YKADIWSLGITAIE 189

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 59.1 bits (143), Expect = 2e-11
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIK  N+ +D +   KI D G+AKLL  +     T++ GT  Y++PE  ++ P + 
Sbjct: 122 ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIV-GTPYYLSPELCEDKPYNE 180

Query: 62  KANVFNYGVVLLE 74
           K++V+  GVVL E
Sbjct: 181 KSDVWALGVVLYE 193

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 57.8 bits (140), Expect = 5e-11
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+K  NIL+      KI D G++K+L  +  +T     GT  YMAPE  K  P S 
Sbjct: 124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQI---GTPHYMAPEVWKGRPYSY 180

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 181 KSDIWSLGCLLYEM 194

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 58.0 bits (140), Expect = 5e-11
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 9/110 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP N+L+D+    ++SD GLA + + D  +T T   GT GYMAPE  K  P S 
Sbjct: 116 IVYRDMKPENVLLDDQGNCRLSDLGLA-VELKD-GKTITQRAGTNGYMAPEILKEEPYSY 173

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIK 111
             + F  G  + E+      +       ++  + V  EE+ ++TLE+ +K
Sbjct: 174 PVDWFAMGCSIYEMVAGRTPF-------KDHKEKVAKEELKRRTLEDEVK 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 57.9 bits (140), Expect = 5e-11
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP N+L+D+    +ISD GLA + +    +      GT GYMAPE  +      
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLA-VELKGGKKIKGRA-GTPGYMAPEVLQGEVYDF 173

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIK 111
             + F  G  L E    +I      F  R+  + V  EE+ ++TLE  ++
Sbjct: 174 SVDWFALGCTLYE----MIA-GRSPF--RQRKEKVEKEELKRRTLEMAVE 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 57.8 bits (139), Expect = 7e-11
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 181

Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ I
Sbjct: 182 QSDIWSMGLSLVELAI 197

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 57.3 bits (139), Expect = 8e-11
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+      KI+DFGLA+L   ++ R ++    TR Y APE
Sbjct: 120 IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 57.8 bits (138), Expect = 8e-11
 Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRT-----FTLIRGTRGYMAPEW-- 53
           IIH DIKP NIL+D      K+ DFGLAKLL    + +      +   GT GYMAPE   
Sbjct: 122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLL 181

Query: 54  -SKNTPISVKANVFNYGVVLLEIE 76
                  S  +++++ G+ L E+ 
Sbjct: 182 GLSLAYASSSSDIWSLGITLYELL 205

Length = 384

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 56.7 bits (137), Expect = 2e-10
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE       + 
Sbjct: 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQ 177

Query: 62  KANVFNYGVVLLEI 75
            A+ +++GV++ E+
Sbjct: 178 SADWWSFGVLMFEM 191

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 57.0 bits (137), Expect = 2e-10
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 181

Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ I
Sbjct: 182 QSDIWSMGLSLVEMAI 197

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH DIK  NIL++E   AK++DFG++  L     +  T+I GT  +MAPE  +    + 
Sbjct: 120 KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI-GTPFWMAPEVIQEIGYNN 178

Query: 62  KANVFNYGVVLLEI 75
           KA++++ G+  +E+
Sbjct: 179 KADIWSLGITAIEM 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 55.5 bits (134), Expect = 4e-10
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  +V
Sbjct: 121 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYTV 177

Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ I
Sbjct: 178 QSDIWSLGLSLVEMAI 193

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 55.2 bits (133), Expect = 4e-10
 Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 3/76 (3%)

Query: 1   LIIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           LI+H D+K  NIL+D+     KI DFG++K+L   +++ +T++ GT  Y++PE  +  P 
Sbjct: 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILS-SKSKAYTVV-GTPCYISPELCEGKPY 178

Query: 60  SVKANVFNYGVVLLEI 75
           + K++++  G VL E+
Sbjct: 179 NQKSDIWALGCVLYEL 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 55.0 bits (133), Expect = 6e-10
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
           I+H DIKP NI +D     K+ DFG A  L  + T     ++   G   YMAPE      
Sbjct: 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK 179

Query: 59  ISVK---ANVFNYGVVLLE 74
                  A++++ G V+LE
Sbjct: 180 GKGHGRAADIWSLGCVVLE 198

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 55.2 bits (133), Expect = 6e-10
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP NIL++     K+ DFG++  L+     TF    GT  YM+PE  +    +V
Sbjct: 125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFV---GTSTYMSPERIQGGKYTV 181

Query: 62  KANVFNYGVVLLEIEIVLINWA 83
           K++V++ G+ ++E+ +    +A
Sbjct: 182 KSDVWSLGISIIELALGKFPFA 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 55.6 bits (134), Expect = 6e-10
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 13/84 (15%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQ--------TRTFTLIRGTRGYMA 50
           I+H D+KP NI++        AK+ DFG+  LL P          TRT T + GT  Y A
Sbjct: 100 IVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVRDADVATLTRT-TEVLGTPTYCA 157

Query: 51  PEWSKNTPISVKANVFNYGVVLLE 74
           PE  +  P++  ++++ +G++ LE
Sbjct: 158 PEQLRGEPVTPNSDLYAWGLIFLE 181

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 54.5 bits (132), Expect = 8e-10
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP N+L+D     K+ DFG AK L   Q +T+T   GT  Y+APE
Sbjct: 114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC-GTPEYVAPE 162

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 54.9 bits (132), Expect = 8e-10
 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 7/78 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL----LMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           +IH DIK  NIL+      K+ DFG +K+    +  D  RTF    GT  Y+APE  +  
Sbjct: 164 MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC---GTPYYVAPEIWRRK 220

Query: 58  PISVKANVFNYGVVLLEI 75
           P S KA++F+ GV+L E+
Sbjct: 221 PYSKKADMFSLGVLLYEL 238

Length = 496

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            IH D+   N L+ E    KISDFGL++ L  D        RG +    +MAPE  K   
Sbjct: 123 FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---YRKRGGKLPIRWMAPESLKEGK 179

Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L EI
Sbjct: 180 FTSKSDVWSFGVLLWEI 196

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 54.1 bits (130), Expect = 1e-09
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D     +ISD GLA  L   Q++T     GT G+MAPE  +      
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA-GTPGFMAPELLQGEEYDF 176

Query: 62  KANVFNYGVVLLEI 75
             + F  GV L E+
Sbjct: 177 SVDYFALGVTLYEM 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 54.1 bits (130), Expect = 1e-09
 Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 5/79 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-----LIRGTRGYMAPEWSKN 56
           IIH DIK  NIL+D     KISDFG++K L  +   T T      ++G+  +MAPE  K 
Sbjct: 127 IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ 186

Query: 57  TPISVKANVFNYGVVLLEI 75
           T  + KA++++ G +++E+
Sbjct: 187 TSYTRKADIWSLGCLVVEM 205

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL  +    K++DFG+A   + D ++    + GT  +MAPE  + +  S 
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVA-TKLNDVSKDDASVVGTPYWMAPEVIEMSGAST 178

Query: 62  KANVFNYGVVLLE 74
            +++++ G  ++E
Sbjct: 179 ASDIWSLGCTVIE 191

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-----IRGTRGYMAPEWSKN 56
            +H D+   N L+ E    KISDFGL++ +  D            I+    +MAPE  K+
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIK----WMAPESLKD 178

Query: 57  TPISVKANVFNYGVVLLEI 75
              + K++V+++GV+L EI
Sbjct: 179 GKFTSKSDVWSFGVLLWEI 197

Length = 258

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 52.8 bits (127), Expect = 4e-09
 Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 6/78 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           +IH D+KP NIL+D     K+ DFG++  L+  + +T +   G   YMAPE      P  
Sbjct: 136 VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRS--AGCAAYMAPERIDPPDPNP 193

Query: 61  ---VKANVFNYGVVLLEI 75
              ++A+V++ G+ L+E+
Sbjct: 194 KYDIRADVWSLGISLVEL 211

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 52.7 bits (127), Expect = 5e-09
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L++     K++DFGLA+       R +T    TR Y APE
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPE 168

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 52.2 bits (126), Expect = 6e-09
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 19/90 (21%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-------------------TRTFTLI 42
           IIH D+KP NIL+D+    KI+DFG AK+L P+                     R F   
Sbjct: 123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF 182

Query: 43  RGTRGYMAPEWSKNTPISVKANVFNYGVVL 72
            GT  Y++PE     P    ++++  G ++
Sbjct: 183 VGTAEYVSPELLNEKPAGKSSDLWALGCII 212

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.8 bits (125), Expect = 8e-09
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            IH D+   N L+ E    KISDFGL++ L  D       ++G +    +MAPE  K   
Sbjct: 124 FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---YKVKGGKLPIRWMAPESLKEGK 180

Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L EI
Sbjct: 181 FTSKSDVWSFGVLLWEI 197

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.8 bits (125), Expect = 8e-09
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-----IRGTRGYMAPEWSKN 56
            +H D+   N L+ E    KISDFGL++ +  D            IR    +MAPE S  
Sbjct: 126 FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR----WMAPE-SLK 180

Query: 57  TPI-SVKANVFNYGVVLLEI 75
             I + K++V+++GV+L EI
Sbjct: 181 DGIFTSKSDVWSFGVLLWEI 200

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 51.8 bits (124), Expect = 9e-09
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I++ D+KP NIL+D++   +ISD GLA  +   +T     IR   GT GYMAPE  KN  
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET-----IRGRVGTVGYMAPEVVKNER 177

Query: 59  ISVKANVFNYGVVLLEI 75
            +   + +  G ++ E+
Sbjct: 178 YTFSPDWWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 24/51 (47%), Positives = 27/51 (52%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH DIKP NIL+ E    K+ DFG A+ L        T    TR Y APE
Sbjct: 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPE 171

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+ P+NI++ E     I+DFGLAK   P+     T + GT  Y  PE  KN P   
Sbjct: 135 IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGE 192

Query: 62  KANVFNYGVVLLEI 75
           KA+V+ +G +L ++
Sbjct: 193 KADVWAFGCILYQM 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I++ D+KP N+L+D     KI+DFG AK +   + RT+TL  GT  Y+APE
Sbjct: 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRV---KGRTYTLC-GTPEYLAPE 168

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 51.2 bits (122), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP NIL+D+    +ISD GLA  +   QT    +  GT GYMAPE  KN   + 
Sbjct: 123 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 180

Query: 62  KANVFNYGVVLLEI 75
             + +  G +L E+
Sbjct: 181 SPDWWALGCLLYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK-------LLMPDQTRTFTLIRGTRGYMAPEWS 54
           IIH D+KP NIL+D     K++DFGL+K       + + D  +    I GT  Y+APE  
Sbjct: 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVI 173

Query: 55  KNTPISVKANVFNYGVVLLE 74
                S   + ++ G +L E
Sbjct: 174 LGQGHSKTVDWWSLGCILYE 193

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 7/77 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I+H DIK  NI + +  T K+ DFG+A++L      T  L R   GT  Y++PE  +N P
Sbjct: 122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVL----NSTVELARTCIGTPYYLSPEICENRP 177

Query: 59  ISVKANVFNYGVVLLEI 75
            + K++++  G VL E+
Sbjct: 178 YNNKSDIWALGCVLYEM 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 50.2 bits (120), Expect = 3e-08
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP N+L+D     K++DFG AK + PD  RTFTL  GT  Y+APE
Sbjct: 139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKV-PD--RTFTLC-GTPEYLAPE 185

Length = 329

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 50.0 bits (119), Expect = 4e-08
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  K +    K
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDFK 181

Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 182 ADIWSLGITAIEL 194

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW---SKNTP 58
           IIH D+KP NIL+D     K+ DFG++  L+    +T     G R YMAPE    S    
Sbjct: 129 IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSARDG 186

Query: 59  ISVKANVFNYGVVLLEI 75
             V+++V++ G+ L E+
Sbjct: 187 YDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 50.0 bits (119), Expect = 4e-08
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+   NIL+ E   AK+SDFGLA++     +      +    + APE  K+   S 
Sbjct: 121 LVHRDLAARNILVSEDGVAKVSDFGLARV----GSMGVDNSKLPVKWTAPEALKHKKFSS 176

Query: 62  KANVFNYGVVLLEI 75
           K++V++YGV+L E+
Sbjct: 177 KSDVWSYGVLLWEV 190

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGL-AKLLMPDQTR-TFTLIRGTRGYMAP-----EW 53
            +IH D+K  NIL+      K++DFG+ AK     Q R TF    GT  +MAP     E 
Sbjct: 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFI---GTPYWMAPEVVACET 179

Query: 54  SKNTPISVKANVFNYGVVLLEI 75
            K+ P   KA++++ G+ L+E+
Sbjct: 180 FKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 49.4 bits (118), Expect = 5e-08
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           II+ DIK  NIL+D      ++DFGL+K  + ++  R ++   GT  YMAPE
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFC-GTIEYMAPE 176

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 6e-08
 Identities = 23/73 (31%), Positives = 42/73 (57%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D+   N+L+ E    K++DFGLA+++  D        +    + APE +     S+K
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIK 184

Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 185 SDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 49.2 bits (117), Expect = 6e-08
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
            +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K T  
Sbjct: 117 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGTAY 173

Query: 60  SVKANVFNYGVVLLEI 75
              A+ F+ G +L ++
Sbjct: 174 DSSADWFSLGCMLFKL 189

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 49.5 bits (118), Expect = 6e-08
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP N+L++     K+ DFG++  L+    +T+    GT  YMAPE        +
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV---GTNAYMAPERISGEQYGI 172

Query: 62  KANVFNYGVVLLEI 75
            ++V++ G+  +E+
Sbjct: 173 HSDVWSLGISFMEL 186

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K     
Sbjct: 118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 174

Query: 61  VKANVFNYGVVLLEI 75
             A+ F+ G +L ++
Sbjct: 175 SSADWFSLGCMLFKL 189

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGLAK     Q      ++ T    APE  +    S 
Sbjct: 123 FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT----APEALREKKFST 178

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 179 KSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 49.2 bits (117), Expect = 7e-08
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 17/111 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
            ++ D+KP NIL+D++   +ISD GLA + +P+       IR   GT GYMAPE   N  
Sbjct: 123 TVYRDLKPENILLDDYGHIRISDLGLA-VKIPEG----ESIRGRVGTVGYMAPEVLNNQR 177

Query: 59  ISVKANVFNYGVVLLE-IEIVLINWAYKCFIDREFNKLVHDEEVNKKTLEN 108
            ++  + +  G ++ E IE          F  R+  + V  EEV+++ LE 
Sbjct: 178 YTLSPDYWGLGCLIYEMIE------GQSPFRGRK--EKVKREEVDRRVLET 220

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 49.3 bits (117), Expect = 8e-08
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  + +    K
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSK 181

Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 182 ADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG--TRGYMAPE 52
           +IH D+KP NIL++     KI DFGLA+ + PD+     L     TR Y APE
Sbjct: 124 VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPE 176

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 11/80 (13%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM-PDQTRTFTLIRGTRG-----YMAPEWSK 55
            +H D+   N ++ E  T KI DFG+ + +   D  R     +G +G     +MAPE  K
Sbjct: 140 FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYR-----KGGKGLLPVRWMAPESLK 194

Query: 56  NTPISVKANVFNYGVVLLEI 75
           +   + K++V+++GVVL E+
Sbjct: 195 DGVFTTKSDVWSFGVVLWEM 214

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP+N+L+      K++DFGLA+       R  T    TR Y APE
Sbjct: 123 ILHRDLKPNNLLIASDGVLKLADFGLAR-SFGSPNRKMTHQVVTRWYRAPE 172

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT----FTLIRGTRGYMAPE-WSKNT 57
           IH DIK  NIL+ E  + KI+DFG++  L     RT     T + GT  +MAPE   +  
Sbjct: 124 IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFV-GTPCWMAPEVMEQVH 182

Query: 58  PISVKANVFNYGVVLLEI 75
               KA+++++G+  +E+
Sbjct: 183 GYDFKADIWSFGITAIEL 200

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+ +  + K++DFG A  L  ++++  +++ GT  +MAPE  K      
Sbjct: 137 VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVV-GTPYWMAPEVIKRKDYGP 195

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMCIEM 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 6/77 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG----YMAPEWSKNTP 58
           IH D+   NIL++     KISDFGLAK+L  D  + +  ++        + APE  + + 
Sbjct: 131 IHRDLAARNILVESEDLVKISDFGLAKVLPED--KDYYYVKEPGESPIFWYAPECLRTSK 188

Query: 59  ISVKANVFNYGVVLLEI 75
            S  ++V+++GV L E+
Sbjct: 189 FSSASDVWSFGVTLYEL 205

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 21/50 (42%), Positives = 29/50 (58%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP N+L+D     K++DFG A  L  ++     L  GT  Y+APE
Sbjct: 124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPE 173

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+++D     KI+DFG+ K  +     TRTF    GT  Y+APE     P 
Sbjct: 122 IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC---GTPDYIAPEIIAYQPY 178

Query: 60  SVKANVFNYGVVLLEI 75
               + + +GV+L E+
Sbjct: 179 GKSVDWWAFGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 23/51 (45%), Positives = 33/51 (64%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H DIKP N+L++     KI DFGLA++  PD+++  T    T+ Y APE
Sbjct: 124 ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPE 174

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 48.2 bits (114), Expect = 2e-07
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 194

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 195 KVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   NIL+ E    K++DFGLA+L+  D      L    +    + APE + +  
Sbjct: 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKED----VYLSSDKKIPYKWTAPEAASHGT 180

Query: 59  ISVKANVFNYGVVLLEI 75
            S K++V+++G++L E+
Sbjct: 181 FSTKSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP N+L+D+    K++DFG AK++    TRT+TL  GT  Y+APE   N     
Sbjct: 152 IVYRDLKPENLLLDKDGFIKMTDFGFAKVV---DTRTYTLC-GTPEYIAPEILLNVGHGK 207

Query: 62  KANVFNYGVVLLEI 75
            A+ +  G+ + EI
Sbjct: 208 AADWWTLGIFIYEI 221

Length = 340

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 48.2 bits (114), Expect = 2e-07
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  K +    K
Sbjct: 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 181

Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 182 ADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-----------------IRG 44
           ++H D+KP NIL+  F    I D+G A     ++     +                 I G
Sbjct: 134 VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVG 193

Query: 45  TRGYMAPEWSKNTPISVKANVFNYGVVLLEI 75
           T  YMAPE     P S   +++  GV+L ++
Sbjct: 194 TPDYMAPERLLGVPASESTDIYALGVILYQM 224

Length = 932

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 47.9 bits (114), Expect = 2e-07
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 9/80 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK----LLMPDQTRTFTLIRGTRGYMAPEW--SK 55
           I+H D+K  N+L+D     KISDFG++K    +   DQ  +   ++G+  +MAPE   S 
Sbjct: 129 ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMS---MQGSVFWMAPEVIHSY 185

Query: 56  NTPISVKANVFNYGVVLLEI 75
           +   S K ++++ G V+LE+
Sbjct: 186 SQGYSAKVDIWSLGCVVLEM 205

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNT 57
           +IH D+KP N+L++     K+ DFG++  L+    +T     G + YMAPE         
Sbjct: 125 VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA--GCKPYMAPERINPELNQK 182

Query: 58  PISVKANVFNYGVVLLEIEI 77
              VK++V++ G+ ++E+  
Sbjct: 183 GYDVKSDVWSLGITMIELAT 202

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 14/82 (17%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--------RTFTLIRGTRGYMAPEW 53
           I+H DIK  NIL D     K+ DFG +K L   QT        ++ T   GT  +M+PE 
Sbjct: 125 IVHRDIKGANILRDSAGNVKLGDFGASKRL---QTICSSGTGMKSVT---GTPYWMSPEV 178

Query: 54  SKNTPISVKANVFNYGVVLLEI 75
                   KA+V++ G  ++E+
Sbjct: 179 ISGEGYGRKADVWSVGCTVVEM 200

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   NIL+ E    KI+DFGLA+L+  D+   +T   G +    + APE +     
Sbjct: 125 IHRDLAARNILVGENLVCKIADFGLARLIEDDE---YTAREGAKFPIKWTAPEAANYGRF 181

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 182 TIKSDVWSFGILLTEI 197

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPESIFDKVYT 253

Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GV+L EI
Sbjct: 254 TQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 47.6 bits (113), Expect = 3e-07
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I+H DIK  NI + +    AK+ DFG+A+ L       +T + GT  Y++PE  +N P +
Sbjct: 122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCV-GTPYYLSPEICQNRPYN 180

Query: 61  VKANVFNYGVVLLEI 75
            K ++++ G VL E+
Sbjct: 181 NKTDIWSLGCVLYEL 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP---DQTRTFTLIRGTRGYMAPE 52
           +IH D+KP N+L++E    +I DFG+A+ L     +     T    TR Y APE
Sbjct: 128 VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPE 181

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 47.4 bits (112), Expect = 3e-07
 Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  N+L+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 194

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 195 KVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+L+D     KI+DFG+ K  +L    T TF    GT  Y+APE     P 
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC---GTPDYIAPEILSYQPY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GV+L E+
Sbjct: 174 GPAVDWWALGVLLYEM 189

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 47.5 bits (113), Expect = 3e-07
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 11/78 (14%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE----WSKNT 57
           ++H D+KP NIL++E    KI DFGLA++  P  T   +    TR Y APE    W K  
Sbjct: 129 VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVS----TRYYRAPEIMLTWQK-- 182

Query: 58  PISVKANVFNYGVVLLEI 75
              V+ ++++ G +  E+
Sbjct: 183 -YDVEVDIWSAGCIFAEM 199

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+      KI+DFGLA++         T +  T  Y APE
Sbjct: 128 IVHRDLKPQNILVTSDGQVKIADFGLARIY--SFEMALTSVVVTLWYRAPE 176

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 47.6 bits (113), Expect = 3e-07
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 194

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 195 KVDIWSLGIMAIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 47.2 bits (112), Expect = 3e-07
 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ E    KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 180

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 181 TIKSDVWSFGILLTEI 196

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 8/77 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I++ D+KP NIL+D+    +ISD GLA  +   +T     +R   GT GYMAPE   N  
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET-----VRGRVGTVGYMAPEVINNEK 177

Query: 59  ISVKANVFNYGVVLLEI 75
            +   + +  G ++ E+
Sbjct: 178 YTFSPDWWGLGCLIYEM 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP--DQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++     KI DFGLA++  P  D T   T    TR Y APE
Sbjct: 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPE 179

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 47.3 bits (112), Expect = 4e-07
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+++D     KI+DFG+ K  M D   TRTF    GT  Y+APE     P 
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFC---GTPDYIAPEIIAYQPY 178

Query: 60  SVKANVFNYGVVLLEI 75
               + + YGV+L E+
Sbjct: 179 GKSVDWWAYGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 47.1 bits (112), Expect = 4e-07
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NIL+D     K++DFGL K  + + T T T   GT  YMAPE
Sbjct: 121 IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC-GTIEYMAPE 170

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 46.9 bits (111), Expect = 5e-07
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+K  N+ +      K+ D G+A++L        TLI GT  YM+PE   N P + 
Sbjct: 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLI-GTPYYMSPELFSNKPYNY 181

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVH 97
           K++V+  G  + E+  +        F  ++ N LV+
Sbjct: 182 KSDVWALGCCVYEMATL-----KHAFNAKDMNSLVY 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 46.8 bits (111), Expect = 5e-07
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 7/100 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+ +   AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 234 IHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---YVVKGNARLPVKWMAPESIFDCV 290

Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  +  +      ++ +F K+V  
Sbjct: 291 YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR 330

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 6e-07
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL-LMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH DIKP N+L+D+    K++DFGL++  L   +        GT  Y+APE        
Sbjct: 118 IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------FVGTPDYLAPETILGVGDD 171

Query: 61  VKANVFNYGVVLLE 74
             ++ ++ G V+ E
Sbjct: 172 KMSDWWSLGCVIFE 185

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 46.3 bits (110), Expect = 6e-07
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIK  NI + +    K+ DFG++K+L  + +   T++ GT  YM+PE  +    + 
Sbjct: 122 ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV-GTPYYMSPELCQGVKYNF 180

Query: 62  KANVFNYGVVLLEI 75
           K++++  G VL E+
Sbjct: 181 KSDIWALGCVLYEL 194

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+      KI DFGLA+ +M D      +++G       +MAPE   N  
Sbjct: 163 IHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN---YVVKGNARLPVKWMAPESIFNCV 219

Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            + +++V++YG++L EI  +  N      +D +F KL+ +
Sbjct: 220 YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 46.3 bits (110), Expect = 7e-07
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNT-PI 59
            +H DIK  NIL+D     K++DFG+AK ++     ++F   +G+  +MAPE        
Sbjct: 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF---KGSPYWMAPEVIAQQGGY 179

Query: 60  SVKANVFNYGVVLLEI 75
            + A++++ G  +LE+
Sbjct: 180 GLAADIWSLGCTVLEM 195

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 46.0 bits (109), Expect = 9e-07
 Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 9/80 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE------WSK 55
           IIH D+KP N+L++     K+ DFG++  L+    +T     G + YMAPE       ++
Sbjct: 124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI---GCQSYMAPERIKSGGPNQ 180

Query: 56  NTPISVKANVFNYGVVLLEI 75
           N   +V+++V++ G+ +LE+
Sbjct: 181 NPTYTVQSDVWSLGLSILEM 200

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 46.3 bits (109), Expect = 9e-07
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 195

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMAIEM 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +I+ D+KP NIL+D      + DFGL KL M D  +T T   GT  Y+APE       + 
Sbjct: 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC-GTPEYLAPELLLGHGYTK 172

Query: 62  KANVFNYGVVLLEI 75
             + +  GV+L E+
Sbjct: 173 AVDWWTLGVLLYEM 186

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+D      ++DFGL K  +  +  T T   GT  Y+APE  +  P   
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC-GTPEYLAPEVLRKEPYDR 175

Query: 62  KANVFNYGVVLLEI 75
             + +  G VL E+
Sbjct: 176 TVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 45.9 bits (110), Expect = 1e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL++     K++DFGLA+   +P +T T  ++  T  Y APE
Sbjct: 119 ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV--TLWYRAPE 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  N+L+ E    KI+DFGLA+++  ++   +T   G +    + APE       
Sbjct: 125 IHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSF 181

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 182 TIKSDVWSFGILLYEI 197

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I++ D+KP NIL+D      ++DFGL K  +   D T TF    GT  Y+APE  +  P 
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC---GTPEYLAPEVIRKQPY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  G VL E+
Sbjct: 174 DNTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H DIK  NIL++     K++DFGLA+      +  +T    T  Y  PE
Sbjct: 121 ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPE 171

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 45.4 bits (107), Expect = 1e-06
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H DIK  NI + +    K+ DFG A+LL        T + GT  Y+ PE  +N P + 
Sbjct: 121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYV-GTPYYVPPEIWENMPYNN 179

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 180 KSDIWSLGCILYEL 193

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+K  N+L+D+    KI+DFG+ K  M  + +  T   GT  Y+APE  K    + 
Sbjct: 117 IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC-GTPDYIAPEILKGQKYNE 175

Query: 62  KANVFNYGVVLLEIEI 77
             + +++GV+L E+ I
Sbjct: 176 SVDWWSFGVLLYEMLI 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  NIL+ E    K++DFG++  L    ++  T + GT  +MAPE  K +    K
Sbjct: 120 IHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV-GTPFWMAPEVIKQSGYDEK 178

Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 179 ADIWSLGITAIEL 191

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 45.3 bits (107), Expect = 2e-06
 Identities = 22/74 (29%), Positives = 43/74 (58%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 121 VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSS 180

Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 181 KSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R  +L+ GT  +MAPE     P   
Sbjct: 136 VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV-GTPYWMAPEVISRLPYGT 194

Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 195 EVDIWSLGIMVIEM 208

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           +IH DIK  NIL+      K+ DFG+A LL  + ++  T + GT  +MAPE  ++     
Sbjct: 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFV-GTPYWMAPEVITEGKYYD 180

Query: 61  VKANVFNYGVVLLEI 75
            KA++++ G+ + E+
Sbjct: 181 TKADIWSLGITIYEM 195

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP--DQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I+H D+K  NI +      KI DFG+++LLM   D   TFT   GT  YM+PE  K+   
Sbjct: 127 ILHRDLKAKNIFLKNN-LLKIGDFGVSRLLMGSCDLATTFT---GTPYYMSPEALKHQGY 182

Query: 60  SVKANVFNYGVVLLEI 75
             K+++++ G +L E+
Sbjct: 183 DSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 44.6 bits (105), Expect = 3e-06
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D+   N+L+ E   AK+SDFGL K     Q      ++ T    APE  +    S K
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 179

Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 180 SDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I++ D+KP NIL+D+    K++DFG AK L   + RT+TL  GT  Y+APE
Sbjct: 122 IVYRDLKPENILLDKEGHIKLTDFGFAKKL---RDRTWTLC-GTPEYLAPE 168

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 44.1 bits (104), Expect = 4e-06
 Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 6/54 (11%)

Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLL--MPDQTRTFTLIRGTRGYMAPE 52
           I+H DIK  N+L++ +    KISDFG +K L  +   T TFT   GT  YMAPE
Sbjct: 129 IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFT---GTLQYMAPE 179

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 43.9 bits (103), Expect = 5e-06
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H DIKP N+ +      K+ D GL +      T   +L+ GT  YM+PE       + 
Sbjct: 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 185

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 186 KSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 44.1 bits (104), Expect = 5e-06
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 2   IIHCDIKPHNILMDEFWTA---KISDFGLAKLLMPDQTRTFTL---IRGTRGYMAPEWSK 55
           IIH D+K  N+L+D   T    +I+DFG A  L    T        + GT  +MAPE  +
Sbjct: 124 IIHRDVKGANLLIDS--TGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLR 181

Query: 56  NTPISVKANVFNYGVVLLEI 75
                   +V++ G V++E+
Sbjct: 182 GEQYGRSCDVWSVGCVIIEM 201

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 28/100 (28%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAK-------------LLMPDQTRTFTLIR------ 43
           IH DIKP NIL+D     K++DFGL K                    R   L+R      
Sbjct: 123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ 182

Query: 44  ---------GTRGYMAPEWSKNTPISVKANVFNYGVVLLE 74
                    GT  Y+APE  + TP  ++ + ++ GV+L E
Sbjct: 183 RRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 43.7 bits (103), Expect = 5e-06
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE       
Sbjct: 126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNKF 182

Query: 60  SVKANVFNYGVVLLEI 75
           S+K++V+ +GV+L EI
Sbjct: 183 SIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 43.9 bits (103), Expect = 5e-06
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 180

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 181 TIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 43.8 bits (103), Expect = 5e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R  +  R    +MAPE   +   +
Sbjct: 196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS-ARLPLKWMAPESIFDKVYT 254

Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GV+L EI
Sbjct: 255 TQSDVWSFGVLLWEI 269

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  D  +  +L+ GT  +MAPE    TP   
Sbjct: 138 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV-GTPYWMAPEVISRTPYGT 196

Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 197 EVDIWSLGIMVIEM 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 43.9 bits (103), Expect = 6e-06
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H DIKP N+ +      K+ D GL +      T   +L+ GT  YM+PE       + 
Sbjct: 127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 185

Query: 62  KANVFNYGVVLLEIEIV 78
           K+++++ G +L E+  +
Sbjct: 186 KSDIWSLGCLLYEMAAL 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.8 bits (103), Expect = 6e-06
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP N+L+      K+ DFG A+ L       +T    TR Y +PE     P   
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK 180

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +L E+
Sbjct: 181 AVDMWSVGCILGEL 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N L+ E    K+SDFGLA+ ++ DQ   +T  +GT+    +  PE    +  
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ---YTSSQGTKFPVKWAPPEVFDYSRF 178

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+++GV++ E+
Sbjct: 179 SSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 43.7 bits (103), Expect = 6e-06
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 8/79 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP N+L++     KI+DFG++++L        + + GT  YM+PE   NT ++ 
Sbjct: 189 IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV-GTIAYMSPE-RINTDLNH 246

Query: 62  KA------NVFNYGVVLLE 74
            A      ++++ GV +LE
Sbjct: 247 GAYDGYAGDIWSLGVSILE 265

Length = 353

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 43.6 bits (103), Expect = 6e-06
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+KP NIL+D      ++DFGL K  +     T TF    GT  Y+APE  +  P 
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC---GTPEYLAPEVLRKQPY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  G VL E+
Sbjct: 174 DRTVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 43.7 bits (103), Expect = 7e-06
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG      + APE    
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAY 183

Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+V+ E+
Sbjct: 184 RKFTSASDVWSYGIVMWEV 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.5 bits (102), Expect = 7e-06
 Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +    KI+DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 180

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 181 TIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 18/83 (21%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLL----------MPDQTRTFTLIRGTRGYMAPE 52
           +H D+   NIL++     KI DFGL K+L           P ++  F        + APE
Sbjct: 130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIF--------WYAPE 181

Query: 53  WSKNTPISVKANVFNYGVVLLEI 75
               +  SV ++V+++GVVL E+
Sbjct: 182 SLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 43.5 bits (103), Expect = 7e-06
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IH D+KP NIL+ +    K+ DFG A++L       +T    TR Y APE
Sbjct: 122 IHRDVKPENILITKQGQIKLCDFGFARILTG-PGDDYTDYVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 43.5 bits (102), Expect = 9e-06
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 259

Query: 61  VKANVFNYGVVLLEI 75
           ++++V+++GV+L EI
Sbjct: 260 IQSDVWSFGVLLWEI 274

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.1 bits (101), Expect = 9e-06
 Identities = 24/76 (31%), Positives = 48/76 (63%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +    KI+DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 180

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 181 TIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK-LLMPDQTRTFTLIRGTRGYMAPE 52
           I++ DIK  NIL+D      ++DFGL+K  L  ++ RT++   GT  YMAPE
Sbjct: 126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFC-GTIEYMAPE 176

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+      KI+DFGLA+++  ++   +T   G +    + APE       
Sbjct: 124 IHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSF 180

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L+EI
Sbjct: 181 TIKSDVWSFGILLMEI 196

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R  +L+ GT  +MAPE     P   
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV-GTPYWMAPELISRLPYGP 195

Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 196 EVDIWSLGIMVIEM 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+++D     KI+DFG+ K  M D   T+TF    GT  Y+APE     P 
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFC---GTPDYIAPEIIAYQPY 178

Query: 60  SVKANVFNYGVVLLEI 75
               + + +GV+L E+
Sbjct: 179 GKSVDWWAFGVLLYEM 194

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM----PDQTRTFTLIRGTRGYMAPE 52
           +IH D+KP NIL++     K++DFGLA+ L       +    T    TR Y APE
Sbjct: 128 VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPE 182

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-----RTFTLIRGTRGYMAPEWSKNT 57
           +H D+   N+L+ E    KI DFGLA+ +M D        TF  ++    +MAPE   N 
Sbjct: 261 VHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLK----WMAPESIFNN 316

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V+++G++L EI
Sbjct: 317 LYTTLSDVWSFGILLWEI 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP NILMD     +++DFG    LM D T   ++  GT  Y++PE
Sbjct: 124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 173

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH DIKP NIL+ +    K+ DFG A+ L       +T    TR Y APE
Sbjct: 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYTDYVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 5/50 (10%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IH DIK  NIL+ E  T K++DFG A L+ P  +       GT  +MAPE
Sbjct: 137 IHRDIKAGNILLTEPGTVKLADFGSASLVSPANS-----FVGTPYWMAPE 181

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           +++ D+K  N+++D+    KI+DFGL K  +      +TF    GT  Y+APE  ++   
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDY 172

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GVV+ E+
Sbjct: 173 GRAVDWWGLGVVMYEM 188

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-----EWSKN 56
           IIH D+K  N+L+      K++DFG++   +    R  + I GT  +MAP     E  K+
Sbjct: 131 IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI-GTPYWMAPEVVMCETMKD 189

Query: 57  TPISVKANVFNYGVVLLEI 75
           TP   KA++++ G+ L+E+
Sbjct: 190 TPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 4   HCDIKPHNILMDEFWTAKISDFGLAKLL--MPDQTRTFTLIRGTRGYMAPE 52
           H D+KP N+L+      KI+DFGLA+ +   P     +T    TR Y APE
Sbjct: 122 HRDLKPENLLVSGPEVVKIADFGLAREIRSRPP----YTDYVSTRWYRAPE 168

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP N+ +      K+ D GL +      T   +L+ GT  YM+PE       + 
Sbjct: 127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 185

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 186 KSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-----QTRTFTLIRGTRGYMAPEWSKN 56
            +H D+   N L+ E  T KISDFGL++ +        Q+++   +R    +M PE    
Sbjct: 145 FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVR----WMPPEAILY 200

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++++++GVVL EI
Sbjct: 201 GKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+K  NIL+D     KI+DFG+ K  M    +T T   GT  Y+APE       + 
Sbjct: 117 IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC-GTPDYIAPEILLGQKYNT 175

Query: 62  KANVFNYGVVLLEIEI 77
             + +++GV+L E+ I
Sbjct: 176 SVDWWSFGVLLYEMLI 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (99), Expect = 2e-05
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 5/53 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPE 52
           I++ D+KP NIL+D      + DFGL+K  L     T TF    GT  Y+APE
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC---GTTEYLAPE 166

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           +H D+   NIL++     K+SDFGL+++L  D   T+T   G     + APE       +
Sbjct: 129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFT 188

Query: 61  VKANVFNYGVVLLEI 75
             ++V+++G+V+ E+
Sbjct: 189 SASDVWSFGIVMWEV 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPE 52
           I++ D+K  N+L+D     KI+DFGL K  M   D+T TF    GT  ++APE
Sbjct: 122 IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC---GTPEFLAPE 171

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 41.6 bits (98), Expect = 4e-05
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG---TRGYMAPE 52
           ++H D+KP N+L++     KI DFGLA+    +       +     TR Y APE
Sbjct: 126 VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPE 179

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 7/64 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTF-TLIRGTRGYMAPE-----WS 54
           + H D+KP NIL +     KI DFGLA++   D  T  F T    TR Y APE     +S
Sbjct: 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 183

Query: 55  KNTP 58
           K TP
Sbjct: 184 KYTP 187

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ DIK  NIL+D      ++DFGL+K    D+        GT  YMAP+
Sbjct: 126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPD 176

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-----EWSKN 56
           IIH D+K  NIL       K++DFG++        R  + I GT  +MAP     E SK+
Sbjct: 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKD 182

Query: 57  TPISVKANVFNYGVVLLEI 75
            P   KA+V++ G+ L+E+
Sbjct: 183 RPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.2 bits (96), Expect = 4e-05
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+ 
Sbjct: 141 VHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDG 196

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V+++GVVL EI
Sbjct: 197 VFTTYSDVWSFGVVLWEI 214

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIK  NIL+ +    K+ DFG++  L     R  T I GT  +MAPE
Sbjct: 134 VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI-GTPYWMAPE 183

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 19/50 (38%), Positives = 30/50 (60%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP N+L+D+    +++DFG    L+ D T    +  GT  Y++PE
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPE 173

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D     K++DFGLA+   +P   RT+T    T  Y APE
Sbjct: 120 VLHRDLKPQNLLIDREGALKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 41.0 bits (96), Expect = 5e-05
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   NIL+      KI DFGLA+ +  D      +++G       +MAPE   N  
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDIRNDSN---YVVKGNARLPVKWMAPESIFNCV 292

Query: 59  ISVKANVFNYGVVLLEI 75
            + +++V++YG++L EI
Sbjct: 293 YTFESDVWSYGILLWEI 309

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-----RTFTLIRGTRGYMAPEWSKNT 57
           +H D+   N+L+ +    KI DFGLA+ +M D        TF  ++    +MAPE   + 
Sbjct: 259 VHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVK----WMAPESIFDN 314

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V++YG++L EI
Sbjct: 315 LYTTLSDVWSYGILLWEI 332

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 41.2 bits (96), Expect = 5e-05
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIR---GTRGYMAPEWSK 55
           +I+H DIK  NIL D     K+ DFG +K L   QT   + T IR   GT  +M+PE   
Sbjct: 126 MIVHRDIKGANILRDSAGNVKLGDFGASKRL---QTICMSGTGIRSVTGTPYWMSPEVIS 182

Query: 56  NTPISVKANVFNYGVVLLEIEIVLINWA 83
                 KA+V++ G  ++E+      WA
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPPWA 210

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NI ++E    KI DFGLA+    + T        TR Y APE
Sbjct: 139 IIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPE 185

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N L+D+    K+SDFGL++ ++ D+   +T   G++    +  PE    +  
Sbjct: 122 IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLLYSKF 178

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+ +GV++ E+
Sbjct: 179 SSKSDVWAFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++     K++DFGLA+   +P   RT+T    T  Y APE
Sbjct: 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPE 170

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NI++    T KI DFGLA+        T  ++  TR Y APE
Sbjct: 139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPE 187

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  +  +L+ GT  +MAPE     P   
Sbjct: 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV-GTPYWMAPEVISRLPYGT 197

Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 198 EVDIWSLGIMVIEM 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP NIL+D      ++DFGL K  +     T T   GT  Y+APE     P   
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC-GTPEYLAPEVLHKQPYDR 175

Query: 62  KANVFNYGVVLLEI 75
             + +  G VL E+
Sbjct: 176 TVDWWCLGAVLYEM 189

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL----------MPDQTRTFTLIRGTRGYMAP 51
           I+H DIK  NIL+D     KI+DFGLA+                TR +T +  TR Y  P
Sbjct: 136 ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPP 195

Query: 52  E 52
           E
Sbjct: 196 E 196

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.3 bits (94), Expect = 8e-05
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+ 
Sbjct: 141 VHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKDG 196

Query: 58  PISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
             +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 197 VFTTSSDMWSFGVVLWEIT-SLAEQPYQGLSNEQVLKFVMD 236

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+K  N+++D     KI+DFG+ K  +    R  T   GT  Y+APE  +    + 
Sbjct: 117 IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC-GTPDYIAPEILQGLKYTF 175

Query: 62  KANVFNYGVVLLEIEI 77
             + +++GV+L E+ I
Sbjct: 176 SVDWWSFGVLLYEMLI 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPD----QTRTFTLIRGTRGYMAPEWSKNTP 58
           +H D+   N+L+     AKISDFGL+K L  D    + R+    +    + APE      
Sbjct: 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG--KWPLKWYAPECINFRK 174

Query: 59  ISVKANVFNYGVVLLE 74
            S +++V++YG+ + E
Sbjct: 175 FSSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+K  NI +++     I D G A+   P     F  + GT    APE       + 
Sbjct: 178 IIHRDVKTENIFINDVDQVCIGDLGAAQF--PVVAPAFLGLAGTVETNAPEVLARDKYNS 235

Query: 62  KANVFNYGVVLLEI 75
           KA++++ G+VL E+
Sbjct: 236 KADIWSAGIVLFEM 249

Length = 357

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPI 59
           +++ DIK  N+++D+    KI+DFGL K  + D    +TF    GT  Y+APE  ++   
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDNDY 172

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GVV+ E+
Sbjct: 173 GRAVDWWGLGVVMYEM 188

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK-LLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
            IH D+   N+L+ E    KI+DFGLA+ +   D  R  T  R    +MAPE   +   +
Sbjct: 153 CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYT 212

Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GV+L EI
Sbjct: 213 HQSDVWSFGVLLWEI 227

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
           ++H D+   N+L+      KI+DFGLAKLL  D+           G     +MA E   +
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE----YHAEGGKVPIKWMALESILH 185

Query: 57  TPISVKANVFNYGVVLLEI 75
              + K++V++YGV + E+
Sbjct: 186 RIYTHKSDVWSYGVTVWEL 204

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 19/73 (26%), Positives = 40/73 (54%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D+   N L+      K+SDFG+ + ++ D+  + +  +    +  PE    +  S K
Sbjct: 122 IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSK 181

Query: 63  ANVFNYGVVLLEI 75
           ++V+++GV++ E+
Sbjct: 182 SDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
            IH D+KP N L+D     K++DFGL+K ++   T   +++ G+  YMAPE
Sbjct: 122 YIHRDLKPENFLIDASGHIKLTDFGLSKGIV---TYANSVV-GSPDYMAPE 168

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
           ++H D+   N+L+ E    KISDFGL++ +  +     + ++ ++G     +MA E   +
Sbjct: 148 LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED----SYVKRSKGRIPVKWMAIESLFD 203

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GV+L EI
Sbjct: 204 HIYTTQSDVWSFGVLLWEI 222

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLA-KLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NI +DE   A + DFG A KL     T       GT    +PE     P  
Sbjct: 206 IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYC 265

Query: 61  VKANVFNYGVVLLEIEI 77
            K ++++ G+VL E+ +
Sbjct: 266 AKTDIWSAGLVLFEMSV 282

Length = 392

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           IIH D+K  N+L+ +    KI+DFGLA+   +P +  T  ++  T  Y APE
Sbjct: 129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVV--TLWYRAPE 178

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTR---GYMAPEWSKNTP 58
           +H D+   NIL++     K+SDFGL++ L  D +  T+T   G +    + APE      
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK 187

Query: 59  ISVKANVFNYGVVLLEI 75
            +  ++V++YG+V+ E+
Sbjct: 188 FTSASDVWSYGIVMWEV 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF 39
           IH DIKP N+L+D     K+SDFGL   L       F
Sbjct: 123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +I+ D+K  NIL+D     K++DFG+ K  + +   T T   GT  Y+APE  +      
Sbjct: 117 VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC-GTPDYIAPEILQELEYGP 175

Query: 62  KANVFNYGVVLLEI 75
             + +  GV++ E+
Sbjct: 176 SVDWWALGVLMYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 12/79 (15%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF----TLIRGTRGYMAPEW---SK 55
           IH DIK  NIL+ E    K++DFG++  L    T T     + I GT  +MAPE     +
Sbjct: 123 IHRDIKGANILLTEDGDVKLADFGVSAQL----TATIAKRKSFI-GTPYWMAPEVAAVER 177

Query: 56  NTPISVKANVFNYGVVLLE 74
                 K +++  G+  +E
Sbjct: 178 KGGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 29/50 (58%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP N+L+D     +++DFG    +  D T   ++  GT  Y++PE
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPE 173

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+K  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA-TMKTFCGTPEYLAPEVLEDNDYGR 174

Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 175 AVDWWGLGVVMYEM 188

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPIS 60
           +H D+   N+L+     AKISDFGL+K L  D+   +  T  +    + APE       S
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS 176

Query: 61  VKANVFNYGVVLLE 74
            K++V+++GV++ E
Sbjct: 177 SKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 12/78 (15%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNTP 58
           IH D+   NIL+ E + AKI+DFGL++            ++ T G +   W    S N  
Sbjct: 146 IHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYS 198

Query: 59  I-SVKANVFNYGVVLLEI 75
           + +  ++V++YGV+L EI
Sbjct: 199 VYTTNSDVWSYGVLLWEI 216

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIK  NIL++     K++DFGLA+L   +++R +T    T  Y  PE
Sbjct: 138 LHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPE 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +    
Sbjct: 120 VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKF 179

Query: 60  SVKANVFNYGVVLLEI 75
           + K++V+++GV+L E+
Sbjct: 180 TTKSDVWSFGVLLWEL 195

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-----LIRGTRGYMAPEWSK 55
           +I+H DIK  NIL D     K+ DFG +K L   QT   +      + GT  +M+PE   
Sbjct: 126 MIVHRDIKGANILRDSVGNVKLGDFGASKRL---QTICLSGTGMKSVTGTPYWMSPEVIS 182

Query: 56  NTPISVKANVFNYGVVLLEIEIVLINWA 83
                 KA++++ G  ++E+      WA
Sbjct: 183 GEGYGRKADIWSVGCTVVEMLTEKPPWA 210

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 4/53 (7%)

Query: 2   IIHCDIKPHNILMDEFWTA-KISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D    A K++DFGLA+   +P   RTFT    T  Y APE
Sbjct: 123 VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP--VRTFTHEVVTLWYRAPE 173

Length = 294

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 9/80 (11%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-----QTRTFTLIRGTRGYMAPEWSK 55
             +H D+   NIL+ E    KISD GL++ +        Q ++   IR    +M PE   
Sbjct: 144 FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIR----WMPPEAIM 199

Query: 56  NTPISVKANVFNYGVVLLEI 75
               S  ++++++GVVL EI
Sbjct: 200 YGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H DIKP NIL+      K++DFG  + +       +T    TR Y APE
Sbjct: 121 IFHRDIKPENILIK-DDILKLADFGSCRGI--YSKPPYTEYISTRWYRAPE 168

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL+      K++DFGLA++       T  ++  T  Y APE    +  + 
Sbjct: 129 IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV--TLWYRAPEVLLQSTYAT 186

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 187 PVDMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH D+   N+L+ E    KI+DFGLA+ +   D  +  T  R    +MAPE   +   + 
Sbjct: 156 IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 215

Query: 62  KANVFNYGVVLLEI 75
           +++V+++GV+L EI
Sbjct: 216 QSDVWSFGVLLWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+K  N+L++     KI DFGLA+       + +T +  T  Y APE
Sbjct: 127 ILHRDLKTSNLLLNNRGILKICDFGLAREY-GSPLKPYTQLVVTLWYRAPE 176

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ D+K  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGR 175

Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 176 AVDWWGLGVVMYEM 189

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 38.1 bits (88), Expect = 5e-04
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NI++    T KI DFGLA+    +   T  ++  TR Y APE
Sbjct: 144 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPE 192

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAK-LLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH D+   N+L+ E    KI+DFGLA+ +   D  +  T  R    +MAPE   +   + 
Sbjct: 162 IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTH 221

Query: 62  KANVFNYGVVLLEI 75
           +++V+++GV+L EI
Sbjct: 222 QSDVWSFGVLLWEI 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D     K++DFGLA+   +P   R +T    T  Y APE
Sbjct: 122 VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP--VRVYTHEVVTLWYRAPE 171

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 5/112 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+KP NI++    T KI DFGLA+        T  ++  TR Y APE         
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKE 197

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVR 113
             ++++ G ++ E+    I +  + +ID ++NK++  E++     E M K++
Sbjct: 198 NVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVI--EQLGTPCPEFMKKLQ 246

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.0 bits (88), Expect = 6e-04
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPIS 60
           ++H ++   NIL+      +I+DFG+A LL PD  + F +  +    +MA E       +
Sbjct: 130 MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYT 189

Query: 61  VKANVFNYGVVLLEI 75
            +++V++YGV + E+
Sbjct: 190 HQSDVWSYGVTVWEM 204

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 14/65 (21%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL-LM-----------PDQTRTFT--LIRGTRG 47
           I+H D+KP N+L+      K++DFGL+K+ LM              TR F    + GT  
Sbjct: 122 IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPE 181

Query: 48  YMAPE 52
           Y+APE
Sbjct: 182 YIAPE 186

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP NIL+      K++DFGLA++       T  ++  T  Y APE    +  + 
Sbjct: 131 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLLQSSYAT 188

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 189 PVDLWSVGCIFAEM 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 38.1 bits (88), Expect = 6e-04
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+L+D     K++D+G+ K  L   D T TF    GT  Y+APE  +    
Sbjct: 117 IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC---GTPNYIAPEILRGEEY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GV++ E+
Sbjct: 174 GFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+ ++E    KI DFGLA+    D   T  ++  TR Y APE
Sbjct: 139 IIHRDLKPGNLAVNEDCELKILDFGLAR--QTDSEMTGYVV--TRWYRAPE 185

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 37.9 bits (88), Expect = 8e-04
 Identities = 16/26 (61%), Positives = 19/26 (73%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLA 28
           IH DIKP NIL+D     K+SDFGL+
Sbjct: 123 IHRDIKPDNILIDRGGHIKLSDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 37.7 bits (87), Expect = 9e-04
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPIS 60
           IIH D+KP N+ ++E    KI DFGLA+    + T        TR Y APE   N    +
Sbjct: 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV----ATRWYRAPEIMLNWMHYN 196

Query: 61  VKANVFNYGVVLLEI 75
              ++++ G ++ E+
Sbjct: 197 QTVDIWSVGCIMAEL 211

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+K  N+L+D     K++DFG+ K  + +   T T   GT  Y+APE  +      
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC-GTPDYIAPEILQEMLYGP 175

Query: 62  KANVFNYGVVLLEI 75
             + +  GV+L E+
Sbjct: 176 SVDWWAMGVLLYEM 189

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-----WSKN 56
           +IH DIK  N+L+ E    K+ DFG++  L     R  T I GT  +MAPE      + +
Sbjct: 132 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPD 190

Query: 57  TPISVKANVFNYGVVLLEI 75
                K+++++ G+  +E+
Sbjct: 191 ATYDFKSDLWSLGITAIEM 209

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D+   N+L+ E   +KI+DFGL++    +     T+ R    +MA E    +  + K
Sbjct: 141 IHRDLAARNVLVGENLASKIADFGLSR--GEEVYVKKTMGRLPVRWMAIESLNYSVYTTK 198

Query: 63  ANVFNYGVVLLEI 75
           ++V+++GV+L EI
Sbjct: 199 SDVWSFGVLLWEI 211

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 37.2 bits (86), Expect = 0.001
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+ ++E    KI DFGLA+    D   T  ++  TR Y APE
Sbjct: 138 IIHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV--TRWYRAPE 184

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+KP NI++    T KI DFGLA+        T  ++  TR Y APE         
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKE 204

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVR 113
             ++++ G ++ E+    + +     ID ++NK++  E++     E M K++
Sbjct: 205 NVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVI--EQLGTPCPEFMKKLQ 253

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIK  NIL+ E    K++DFG A +  P  +       GT  +MAPE
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFGSASIASPANS-----FVGTPYWMAPE 191

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIK  N+L+ E    K+ DFG++  L     R  T I GT  +MAPE
Sbjct: 142 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 191

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D+   NIL+ E + AKI+DFGL++    +     T+ R    +MA E    +  +  
Sbjct: 134 IHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTN 191

Query: 63  ANVFNYGVVLLEI 75
           ++V++YGV+L EI
Sbjct: 192 SDVWSYGVLLWEI 204

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 36.9 bits (85), Expect = 0.001
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH D+   N+L+ E    KI+DFGLA+ +   D  +  T  R    +MAPE   +   + 
Sbjct: 159 IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTH 218

Query: 62  KANVFNYGVVLLEI 75
           +++V+++GV++ EI
Sbjct: 219 QSDVWSFGVLMWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPE 52
           ++H D+KP N+L++     KI DFGLA+     +   F T    TR Y APE
Sbjct: 129 VLHRDLKPSNLLLNANCDLKICDFGLAR--TTSEKGDFMTEYVVTRWYRAPE 178

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   N+L+     AKISDFG+++ L           R T        + APE    
Sbjct: 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGS----DYYRATTAGRWPLKWYAPECINY 172

Query: 57  TPISVKANVFNYGVVLLE 74
              S K++V++YGV L E
Sbjct: 173 GKFSSKSDVWSYGVTLWE 190

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 7/78 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL----LMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           ++H D+K  NI +      K+ DFG +K     +  D   +F    GT  Y+APE  +  
Sbjct: 190 MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFC---GTPYYLAPELWERK 246

Query: 58  PISVKANVFNYGVVLLEI 75
             S KA++++ GV+L E+
Sbjct: 247 RYSKKADMWSLGVILYEL 264

Length = 478

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+L+D     K++D+G+ K  L   D T TF    GT  Y+APE  +    
Sbjct: 117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GV++ E+
Sbjct: 174 GFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)

Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-----LIRGTRGYMAPEWSK 55
           +I+H DIK  NIL D     K+ DFG +K +   QT   +      + GT  +M+PE   
Sbjct: 126 MIVHRDIKGANILRDSAGNVKLGDFGASKRI---QTICMSGTGIKSVTGTPYWMSPEVIS 182

Query: 56  NTPISVKANVFNYGVVLLEIEIVLINWA 83
                 KA+V++    ++E+      WA
Sbjct: 183 GEGYGRKADVWSVACTVVEMLTEKPPWA 210

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK--LLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+L+D     K++D+G+ K  +   D T TF    GT  Y+APE  +    
Sbjct: 117 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC---GTPNYIAPEILRGEDY 173

Query: 60  SVKANVFNYGVVLLEI 75
               + +  GV++ E+
Sbjct: 174 GFSVDWWALGVLMFEM 189

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N L+ E    KISDFG+++    ++   +T+  G +     + APE      
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSR---EEEGGIYTVSDGLKQIPIKWTAPEALNYGR 171

Query: 59  ISVKANVFNYGVVLLEI 75
            + +++V++YG++L E 
Sbjct: 172 YTSESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLA-KLLMPDQTRT----FTLIRGTRGYMAPEWSKNT 57
           +H D+   N L+ E    KI+DFGL+  +   D  +        IR    +M PE     
Sbjct: 152 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIR----WMPPESIFYN 207

Query: 58  PISVKANVFNYGVVLLEI 75
             + +++V+ YGVVL EI
Sbjct: 208 RYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+ ++E    +I DFGLA+    D   T  +   TR Y APE
Sbjct: 139 IIHRDLKPSNVAVNEDCELRILDFGLAR--QADDEMTGYV--ATRWYRAPE 185

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIK  NIL+ E    K++DFG A    P    +F    GT  +MAPE
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--ANSFV---GTPYWMAPE 187

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRG--TRGYMAPE 52
           ++H D+KP N+ ++ E    KI DFGLA+++ P  +    L  G  T+ Y +P 
Sbjct: 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR 188

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKL 30
           ++H D+KP NIL+     E    KI D GLA+L
Sbjct: 129 VLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH D+K  NIL+ E    K+ DFG A ++ P          GT  +MAPE
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPYWMAPE 181

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 35.9 bits (83), Expect = 0.003
 Identities = 15/25 (60%), Positives = 18/25 (72%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGL 27
           IH DIKP NIL+D     K++DFGL
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+K +NIL+      K+ DFG++  L   + R  T + GT  +MAPE
Sbjct: 149 IIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPE 198

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLA-KLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH D+KP N+L+D+    K++DFG   K+      R  T + GT  Y++PE
Sbjct: 163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAV-GTPDYISPE 213

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 14/31 (45%), Positives = 22/31 (70%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM 32
           IIH D+KP N+L+      K++DFGL+K+ +
Sbjct: 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 19/83 (22%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRG------YMAPE--- 52
           +H D+   NIL++     K+SDFGL++ L   + T T      T+G      + APE   
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYT------TKGGKIPIRWTAPEAIA 181

Query: 53  WSKNTPISVKANVFNYGVVLLEI 75
           + K T  S   +V+++G+V+ E+
Sbjct: 182 YRKFTSAS---DVWSFGIVMWEV 201

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTPI 59
           IH D+   N+L+D     KI DFGLAK + P+    + +         + A E  K    
Sbjct: 129 IHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAVECLKENKF 187

Query: 60  SVKANVFNYGVVLLEI 75
           S  ++V+++GV L E+
Sbjct: 188 SYASDVWSFGVTLYEL 203

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 35.8 bits (82), Expect = 0.004
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 1   LIIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
            I H D+KP N+L+D    T K+ DFG AK L+  Q R+ + I  +R Y APE
Sbjct: 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ-RSVSYI-CSRFYRAPE 240

Length = 440

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAK-LLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D +    KI+D GL +   +P ++ T  ++  T  Y APE
Sbjct: 131 VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIV--TLWYRAPE 181

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 35.3 bits (81), Expect = 0.004
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM-----PDQTRTFTLIRGTRGYMAPEWSKN 56
           ++H DIK +N+++      K+ DFG A+ L         +     + GT  +MAPE    
Sbjct: 123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE 182

Query: 57  TPISVKANVFNYGVVLLEI 75
           +    K+++++ G  + E+
Sbjct: 183 SGYGRKSDIWSIGCTVFEM 201

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.93
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.92
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.91
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.9
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.88
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.87
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.87
KOG0578	550	consensus p21-activated serine/threonine protein k	99.87
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.87
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.87
KOG0605	550	consensus NDR and related serine/threonine kinases	99.87
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.86
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.86
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.86
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.86
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.85
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.84
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.84
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.84
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.84
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.83
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.83
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.83
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.83
KOG0198	313	consensus MEKK and related serine/threonine protei	99.82
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.82
PHA02882	294	putative serine/threonine kinase; Provisional	99.81
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.81
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.81
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.81
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.81
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.81
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.8
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.8
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.8
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.8
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.8
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.8
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.8
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.8
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.8
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.8
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.8
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.8
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.8
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.79
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.79
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.79
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.79
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.79
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.79
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.79
PTZ00283	496	serine/threonine protein kinase; Provisional	99.79
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.79
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.79
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.79
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.79
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.79
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.79
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.79
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.79
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.79
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.78
PHA02988	283	hypothetical protein; Provisional	99.78
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.78
KOG0584	632	consensus Serine/threonine protein kinase [General	99.78
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.78
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.78
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.78
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.78
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.78
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.78
PHA03212	391	serine/threonine kinase US3; Provisional	99.78
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.78
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.78
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.78
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.78
PTZ00267	478	NIMA-related protein kinase; Provisional	99.78
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.78
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.77
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.77
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.77
KOG0589	426	consensus Serine/threonine protein kinase [General	99.77
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.77
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.77
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.77
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.77
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.77
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.77
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.77
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.77
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.77
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.77
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.76
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.76
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.76
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.76
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.76
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.76
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.76
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.76
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.76
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.76
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.76
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.76
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.76
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.76
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.76
PTZ00284	467	protein kinase; Provisional	99.76
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.76
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.76
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.76
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.75
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.75
PHA03210	501	serine/threonine kinase US3; Provisional	99.75
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.75
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.75
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.75
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.75
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.75
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.75
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.75
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.75
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.74
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.74
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.74
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.74
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.74
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.74
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.74
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.74
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.74
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.74
PTZ00036	440	glycogen synthase kinase; Provisional	99.74
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.74
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.74
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.74
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.74
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.74
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.74
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.73
PHA03207	392	serine/threonine kinase US3; Provisional	99.73
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.73
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.73
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.73
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.73
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.73
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.73
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.73
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.73
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.73
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.73
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.73
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.73
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.73
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.73
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.73
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.73
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.73
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.73
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.73
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.73
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.72
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.72
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.72
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.72
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.72
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.72
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.72
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.72
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.72
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.72
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.72
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.72
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.72
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.72
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.72
PHA03211	461	serine/threonine kinase US3; Provisional	99.71
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.71
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.71
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.71
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.71
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.71
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.71
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.71
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.71
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.71
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.71
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.71
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.71
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.71
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.71
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.7
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.7
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.7
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.7
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.7
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.7
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.7
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.7
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.7
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.7
PHA03209	357	serine/threonine kinase US3; Provisional	99.7
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.7
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.7
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.69
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.69
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.69
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.69
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.69
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.69
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.69
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.69
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.69
PLN00181	793	protein SPA1-RELATED; Provisional	99.69
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.69
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.69
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.69
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.69
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.68
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.68
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.68
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.68
KOG0610	459	consensus Putative serine/threonine protein kinase	99.68
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.68
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.68
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.68
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.68
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.68
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.68
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.68
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.68
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.68
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.68
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.68
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.68
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.68
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.68
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.68
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.67
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.67
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.67
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.67
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.67
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.67
KOG3653	534	consensus Transforming growth factor beta/activin	99.67
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.67
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.67
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.67
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.67
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.66
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.66
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.66
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.66
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.66
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.66
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.66
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.66
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.66
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.66
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.66
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.66
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.66
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.66
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.66
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.66
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.66
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.65
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.65
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.65
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.65
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.65
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.65
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.65
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.65
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.65
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.65
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.65
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.65
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.64
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.64
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.64
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.64
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.64
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.64
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.64
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.64
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.64
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.64
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.64
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.63
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.63
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.63
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.63
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.63
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.63
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.63
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.63
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.63
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.63
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.63
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.63
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.62
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.62
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.62
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.62
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.62
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.62
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.62
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.62
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.62
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.62
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.62
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.62
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.61
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.61
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.61
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.61
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.61
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.61
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.61
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.61
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.61
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.6
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.6
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.6
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.6
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.6
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.6
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.6
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.6
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.59
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.59
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.59
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.59
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.59
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.59
KOG0586	596	consensus Serine/threonine protein kinase [General	99.59
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.59
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.59
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.59
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.59
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.59
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.59
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.58
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.58
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.58
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.58
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.58
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.58
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.58
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.58
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.58
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.57
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.57
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.57
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.57
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.57
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.57
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.57
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.57
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.57
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.57
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.57
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.56
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.56
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.56
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.56
PLN00009	294	cyclin-dependent kinase A; Provisional	99.55
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.55
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.55
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.55
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.54
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.54
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.53
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.53
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.53
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.52
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.52
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.51
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.51
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.51
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.5
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.5
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.5
KOG1152	772	consensus Signal transduction serine/threonine kin	99.5
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.49
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.48
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.46
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.43
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.39
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.34
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.31
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.26
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.25
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.23
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.22
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.18
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.11
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.1
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.09
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.08
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.07
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.07
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.93
PRK09188	365	serine/threonine protein kinase; Provisional	98.86
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.86
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.77
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.74
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.74
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.66
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.59
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.55
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.53
PRK12274	218	serine/threonine protein kinase; Provisional	98.41
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.35
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.32
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.23
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.03
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.9
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.79
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.77
smart00090	237	RIO RIO-like kinase.	97.76
PRK10345	210	hypothetical protein; Provisional	97.57
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.51
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.44
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.39
PRK14879	211	serine/threonine protein kinase; Provisional	97.38
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.28
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.22
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.21
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.19
COG4248	637	Uncharacterized protein with protein kinase and he	97.0
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.86
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.85
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.52
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.48
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.22
KOG3087	229	consensus Serine/threonine protein kinase [General	95.93
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.9
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.47
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.36
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.33
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.08
PRK05231	319	homoserine kinase; Provisional	94.64
PF01636	239	APH: Phosphotransferase enzyme family This family	94.57
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.24
COG2334	331	Putative homoserine kinase type II (protein kinase	94.06
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.98
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.89
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.73
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.62
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.49
KOG1243	690	consensus Protein kinase [General function predict	93.42
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.22
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	93.16
COG0478	304	RIO-like serine/threonine protein kinase fused to	93.15
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	93.08
PRK10271	188	thiK thiamine kinase; Provisional	92.63
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	92.41
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.69
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	90.8
PLN02236	344	choline kinase	90.61
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	90.59
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	90.47
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.3
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	90.11
PRK06148	1013	hypothetical protein; Provisional	89.23
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	88.89
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	88.25
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	88.1
KOG1290	590	consensus Serine/threonine protein kinase [Signal	86.86
KOG0576	829	consensus Mitogen-activated protein kinase kinase	86.84
PRK06149	972	hypothetical protein; Provisional	85.23
PRK09550	401	mtnK methylthioribose kinase; Reviewed	84.65
PRK09902	216	hypothetical protein; Provisional	84.63
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	84.6
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	83.85
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	82.75
PRK11768	325	serine/threonine protein kinase; Provisional	82.66
PHA03111	444	Ser/Thr kinase; Provisional	80.1

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4e-26  Score=167.11  Aligned_cols=127  Identities=40%  Similarity=0.629  Sum_probs=100.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCC-CCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ||||||||++|||||.++.+|++|||+++.... .... .+...||.+|++||+...+..+.|+||||||++++|+.+|.
T Consensus       197 ~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~-~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr  275 (361)
T KOG1187|consen  197 PIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSV-STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGR  275 (361)
T ss_pred             CEecCCCCHHHeeECCCCCEEccCccCcccCCccccce-eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCC
Confidence            699999999999999999999999999976543 2221 11116999999999999888999999999999999997766


Q ss_pred             cc--------------hhhhhcchhhhhhccCCc----cccH-HHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           80 IN--------------WAYKCFIDREFNKLVHDE----EVNK-KTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        80 ~~--------------~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      .+              |......++.+..++|+.    +... .+++++..++++|            +|+++|+.....
T Consensus       276 ~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  276 KAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             cccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            43              333344445677888872    3343 7999999999999            899999765544

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.92  E-value=5.3e-26  Score=162.12  Aligned_cols=112  Identities=29%  Similarity=0.427  Sum_probs=89.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||||||||+|+|+...|.+||||||+++.+.++   ...+..||..|||||.+.+..|+.++||||||+.++|+..|..|
T Consensus       200 IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP  276 (364)
T KOG0581|consen  200 IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFP  276 (364)
T ss_pred             eeeccCCHHHeeeccCCCEEeccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCC
Confidence            899999999999999999999999999987654   34566799999999999999999999999999999999999999


Q ss_pred             hhhhh----cchhhhhhccCC--ccccHH-HHHHHHHHHHHh
Q 042492           82 WAYKC----FIDREFNKLVHD--EEVNKK-TLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~----~~~~~~~~~~~~--~~~~~~-~~~~~~~~~l~C  116 (137)
                      |....    ..-+.+..+++.  +..+.. .-.++....-.|
T Consensus       277 ~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~C  318 (364)
T KOG0581|consen  277 YPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCC  318 (364)
T ss_pred             CCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHH
Confidence            98641    122456677764  222222 444455555666

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=1.4e-25  Score=163.89  Aligned_cols=123  Identities=31%  Similarity=0.435  Sum_probs=95.5

Q ss_pred             CeEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccC--CCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK--NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ||||||||++|+|++.++ .+||+|||+++...... ...+...||+.|||||++.  ...++.|+||||||+++||+.+
T Consensus       163 ~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t  241 (362)
T KOG0192|consen  163 PIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLT  241 (362)
T ss_pred             CeeecccChhhEEEcCCCCEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHH
Confidence            389999999999999997 99999999998764321 2233356999999999999  5689999999999999999999


Q ss_pred             cccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           78 VLINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      +..||..... .+-...++..   ...+......+..+..+|            +++.+|+..
T Consensus       242 ~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  242 GEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             CCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence            9999986655 3333333322   333444677777788889            888888754

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=6.2e-25  Score=152.71  Aligned_cols=83  Identities=29%  Similarity=0.476  Sum_probs=74.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||.||.++.+|.+|+.|||+++.+... +....+..||+.||+||.+...+|+.|+||||+||+++||.....|
T Consensus       149 VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~P  227 (375)
T KOG0591|consen  149 VMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSP  227 (375)
T ss_pred             eeeccCcchheEEcCCCceeeccchhHhHhcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCC
Confidence            789999999999999999999999999987543 3334566799999999999999999999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       228 F~g~  231 (375)
T KOG0591|consen  228 FYGD  231 (375)
T ss_pred             cccc
Confidence            9865

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.90  E-value=2.5e-24  Score=153.46  Aligned_cols=113  Identities=27%  Similarity=0.337  Sum_probs=86.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |||||+||+|||++..|+++|+|||+++........ ....+||+.|||||++....++..+|.||+|+++|||++|..|
T Consensus       146 IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~-t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pP  224 (357)
T KOG0598|consen  146 IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA-TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPP  224 (357)
T ss_pred             eeeccCCHHHeeecCCCcEEEeccccchhcccCCCc-cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCC
Confidence            799999999999999999999999999865333222 2346799999999999999999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC-----ccccHHHHHHHHHHHHHh
Q 042492           82 WAYKCFIDREFNKLVHD-----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~C  116 (137)
                      |...... ..++.+...     ......+...+++--|.=
T Consensus       225 F~~~~~~-~~~~~I~~~k~~~~p~~ls~~ardll~~LL~r  263 (357)
T KOG0598|consen  225 FYAEDVK-KMYDKILKGKLPLPPGYLSEEARDLLKKLLKR  263 (357)
T ss_pred             CcCccHH-HHHHHHhcCcCCCCCccCCHHHHHHHHHHhcc
Confidence            9866542 223333322     333455666665544433

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.88  E-value=4.6e-23  Score=143.98  Aligned_cols=110  Identities=26%  Similarity=0.345  Sum_probs=87.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |++||+||+|||+|.+|.+|+.|||+++.....    ..+.+||+.|+|||++.+..++.++|.||||++++||..|..|
T Consensus       165 iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pP  240 (355)
T KOG0616|consen  165 IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPP  240 (355)
T ss_pred             eeeccCChHHeeeccCCcEEEEeccceEEecCc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            799999999999999999999999999976322    2345799999999999999999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC----cccc----HHHHHHHHHHHHHh
Q 042492           82 WAYKCFIDREFNKLVHD----EEVN----KKTLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~----~~~~----~~~~~~~~~~~l~C  116 (137)
                      |..... -+.+++++..    +...    .+-+..++.+-+.+
T Consensus       241 F~~~~~-~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~  282 (355)
T KOG0616|consen  241 FYDDNP-IQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTK  282 (355)
T ss_pred             CcCCCh-HHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHh
Confidence            986554 4556777665    3333    34444555554444

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.87  E-value=2.3e-23  Score=150.29  Aligned_cols=83  Identities=33%  Similarity=0.488  Sum_probs=71.9

Q ss_pred             eEecCCCCCCEEeCCC------CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEF------WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el   75 (137)
                      ||||||||+|||++..      -..||+|||++|.+.+..  .....+|++.|||||++...+|+.|+|+||+|+++|++
T Consensus       130 IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~  207 (429)
T KOG0595|consen  130 IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQC  207 (429)
T ss_pred             eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHH
Confidence            8999999999999864      457999999999875322  24456799999999999999999999999999999999


Q ss_pred             Hhcccchhhhh
Q 042492           76 EIVLINWAYKC   86 (137)
Q Consensus        76 ~~~~~~~~~~~   86 (137)
                      .+|..||....
T Consensus       208 l~g~~Pf~a~t  218 (429)
T KOG0595|consen  208 LTGKPPFDAET  218 (429)
T ss_pred             HhCCCCccccC
Confidence            99999997543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=153.87  Aligned_cols=108  Identities=26%  Similarity=0.342  Sum_probs=87.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||+||||-+|||||..|++||+|||+++....... ...+.+||+.|+|||++....|+..+|.|||||++|||+.|..|
T Consensus       489 IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~P  567 (694)
T KOG0694|consen  489 IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESP  567 (694)
T ss_pred             ceeeecchhheEEcccCcEEecccccccccCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999997543222 33456799999999999999999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC----ccccHHHHHHHHH
Q 042492           82 WAYKCFIDREFNKLVHD----EEVNKKTLENMIK  111 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  111 (137)
                      |.... +++-++.++.+    +.+-..+...+++
T Consensus       568 F~gdd-Eee~FdsI~~d~~~yP~~ls~ea~~il~  600 (694)
T KOG0694|consen  568 FPGDD-EEEVFDSIVNDEVRYPRFLSKEAIAIMR  600 (694)
T ss_pred             CCCCC-HHHHHHHHhcCCCCCCCcccHHHHHHHH
Confidence            97443 45666777655    3444455555444

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=151.06  Aligned_cols=85  Identities=28%  Similarity=0.437  Sum_probs=75.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||||++|||++.++.+|+.|||+|..+....... ....||++|||||+.....|..|+||||+|++++||..|..|
T Consensus       390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR-~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPP  468 (550)
T KOG0578|consen  390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR-STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPP  468 (550)
T ss_pred             eeeeccccceeEeccCCcEEEeeeeeeeccccccCcc-ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCC
Confidence            8999999999999999999999999999876555443 345699999999999999999999999999999999999999


Q ss_pred             hhhhhc
Q 042492           82 WAYKCF   87 (137)
Q Consensus        82 ~~~~~~   87 (137)
                      |..+..
T Consensus       469 YlnE~P  474 (550)
T KOG0578|consen  469 YLNENP  474 (550)
T ss_pred             ccCCCh
Confidence            986443

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.87  E-value=1.9e-22  Score=149.99  Aligned_cols=114  Identities=30%  Similarity=0.393  Sum_probs=85.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc----------e--eeecccccceecccccCCCCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR----------T--FTLIRGTRGYMAPEWSKNTPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~----------~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G   69 (137)
                      ||||||||+|||++++++++|.|||.++.+.+....          .  ...++||-.|.+||++..+..+..+|+|+||
T Consensus       195 IIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlG  274 (604)
T KOG0592|consen  195 IIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALG  274 (604)
T ss_pred             ceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHH
Confidence            799999999999999999999999999987432211          1  1346799999999999999999999999999


Q ss_pred             HHHHHHHhcccchhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHHh
Q 042492           70 VVLLEIEIVLINWAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~C  116 (137)
                      |++|+|+.|..||..... --.++++++-    .+...+.+.++++-.|.=
T Consensus       275 CilyQmlaG~PPFra~Ne-yliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~  324 (604)
T KOG0592|consen  275 CILYQMLAGQPPFRAANE-YLIFQKIQALDYEFPEGFPEDARDLIKKLLVR  324 (604)
T ss_pred             HHHHHHhcCCCCCccccH-HHHHHHHHHhcccCCCCCCHHHHHHHHHHHcc
Confidence            999999999999975431 1123334332    333446666666644443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.87  E-value=2.2e-22  Score=139.77  Aligned_cols=96  Identities=29%  Similarity=0.448  Sum_probs=79.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      .|||||+||+|||+|..|.+|+||||.+-.+..+..+  +...|++.|||||.+.   ...|+.++||||||+.++||.+
T Consensus       212 ~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh--trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT  289 (391)
T KOG0983|consen  212 GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH--TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT  289 (391)
T ss_pred             ceeecccCccceEEccCCCEEeecccccceeeccccc--ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence            4899999999999999999999999998777554443  3345899999999884   3457889999999999999999


Q ss_pred             cccchhhhhcchhhhhhccCC
Q 042492           78 VLINWAYKCFIDREFNKLVHD   98 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~   98 (137)
                      |..||.....+-+-+..+++.
T Consensus       290 g~yPy~~c~tdFe~ltkvln~  310 (391)
T KOG0983|consen  290 GQYPYKGCKTDFEVLTKVLNE  310 (391)
T ss_pred             ccCCCCCCCccHHHHHHHHhc
Confidence            999998766555666666654

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.87  E-value=8.6e-23  Score=151.39  Aligned_cols=120  Identities=27%  Similarity=0.350  Sum_probs=89.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCC----------------------CCcc-----e----------------
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP----------------------DQTR-----T----------------   38 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~----------------------~~~~-----~----------------   38 (137)
                      +|||||||+|+|+|..|++||+|||++..+..                      ....     .                
T Consensus       262 yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nr  341 (550)
T KOG0605|consen  262 YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNR  341 (550)
T ss_pred             cccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhh
Confidence            69999999999999999999999999864321                      0000     0                


Q ss_pred             ---eeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhhcchhhhhhccCC--------ccccHHHHH
Q 042492           39 ---FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD--------EEVNKKTLE  107 (137)
Q Consensus        39 ---~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  107 (137)
                         .....||+-|+|||++.+..|+..+|.||+||+++||+.|..||..... ++.+.+++..        .....++++
T Consensus       342 r~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp-~~T~rkI~nwr~~l~fP~~~~~s~eA~  420 (550)
T KOG0605|consen  342 RQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETP-QETYRKIVNWRETLKFPEEVDLSDEAK  420 (550)
T ss_pred             hhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhhhccCCCcCcccHHHH
Confidence               0124589999999999999999999999999999999999999986554 3344444432        223346666


Q ss_pred             HHHHHHHHhHHHHHHh
Q 042492          108 NMIKVRLWCSVVMMLE  123 (137)
Q Consensus       108 ~~~~~~l~C~v~~~L~  123 (137)
                      .++. .|.|++.+.|-
T Consensus       421 DLI~-rll~d~~~RLG  435 (550)
T KOG0605|consen  421 DLIT-RLLCDPENRLG  435 (550)
T ss_pred             HHHH-HHhcCHHHhcC
Confidence            6555 66777777775

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=2e-22  Score=149.06  Aligned_cols=114  Identities=27%  Similarity=0.330  Sum_probs=86.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .+|||||..+|||++.+..+||+|||++|..............-...|+|||.+..+.|+.|+||||||++|||+.+ |.
T Consensus       323 ~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~  402 (468)
T KOG0197|consen  323 NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGR  402 (468)
T ss_pred             CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCC
Confidence            36999999999999999999999999999554333333333334568999999999999999999999999999977 45


Q ss_pred             cchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                      .|+....  ..+....++.   .+.+..++..+.+++..|
T Consensus       403 ~py~~ms--n~ev~~~le~GyRlp~P~~CP~~vY~lM~~C  440 (468)
T KOG0197|consen  403 VPYPGMS--NEEVLELLERGYRLPRPEGCPDEVYELMKSC  440 (468)
T ss_pred             CCCCCCC--HHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence            5654332  2233333333   456667888889999999

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.86  E-value=1.1e-22  Score=142.82  Aligned_cols=88  Identities=33%  Similarity=0.443  Sum_probs=76.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +|||||||+||+++.++.+|+||||++|.+.. .....+-+..|.+|.|||.+.+ .+|...+||||+||++.||.+|..
T Consensus       122 ~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~p  200 (396)
T KOG0593|consen  122 CIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEP  200 (396)
T ss_pred             eecccCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCc
Confidence            69999999999999999999999999998753 2233456678999999999876 778899999999999999999999


Q ss_pred             chhhhhcchh
Q 042492           81 NWAYKCFIDR   90 (137)
Q Consensus        81 ~~~~~~~~~~   90 (137)
                      -|......++
T Consensus       201 L~PG~SDiDQ  210 (396)
T KOG0593|consen  201 LWPGRSDIDQ  210 (396)
T ss_pred             CCCCcchHHH
Confidence            9988766554

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.86  E-value=1.4e-22  Score=152.13  Aligned_cols=82  Identities=40%  Similarity=0.503  Sum_probs=73.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |||||||+.|||+..+..+||+|||.++.+...  .+...+.||..|||||++.+.+.+.|+||||||||||||+++..|
T Consensus       233 IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiP  310 (904)
T KOG4721|consen  233 IIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIP  310 (904)
T ss_pred             HhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCC
Confidence            799999999999999999999999999876443  334466799999999999999999999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |..-
T Consensus       311 YkdV  314 (904)
T KOG4721|consen  311 YKDV  314 (904)
T ss_pred             cccc
Confidence            8643

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.86  E-value=1.7e-22  Score=135.37  Aligned_cols=96  Identities=30%  Similarity=0.507  Sum_probs=77.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC----CCCCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      .|||||+||+|||++..|.+|+||||.+-.+..+-..+  .-.|+..|||||.+.    ...|+.|+|+||+|+.+.||.
T Consensus       169 ~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt--~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA  246 (282)
T KOG0984|consen  169 SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT--MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMA  246 (282)
T ss_pred             hhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH--HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhh
Confidence            47999999999999999999999999998775443322  234889999999874    335889999999999999999


Q ss_pred             hcccchhhhhcchhhhhhccCC
Q 042492           77 IVLINWAYKCFIDREFNKLVHD   98 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~   98 (137)
                      +++.||......-+.+.+++..
T Consensus       247 ~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  247 ILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             hccccccccCCHHHHHHHHhcC
Confidence            9999987666555666666644

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.85  E-value=1.6e-22  Score=139.83  Aligned_cols=113  Identities=27%  Similarity=0.387  Sum_probs=83.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |||||+||+|||++..|.+|+||||.+-.+..+-.  .+.-.|+..|||||.+..  ..++.++|+||+|++++|+.+|.
T Consensus       189 iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~  266 (361)
T KOG1006|consen  189 IIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGN  266 (361)
T ss_pred             hhhccCChhheEEecCCCEeeecccchHhHHHHHH--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCC
Confidence            79999999999999999999999999876643322  233458999999998853  23789999999999999999999


Q ss_pred             cchhhhhcchhhhhhccCC--c-----cccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--E-----EVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~l~C  116 (137)
                      .|+......-+.+..++.+  +     .....--..+.+....|
T Consensus       267 fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintC  310 (361)
T KOG1006|consen  267 FPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTC  310 (361)
T ss_pred             CCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHH
Confidence            9986554444445555544  1     11122344567777778

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.84  E-value=2.1e-21  Score=140.75  Aligned_cols=125  Identities=25%  Similarity=0.325  Sum_probs=87.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.++++|||+++........ ......++..|+|||.+.+..++.++|+||||+++|||.+ |
T Consensus       194 ~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g  273 (338)
T cd05102         194 KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG  273 (338)
T ss_pred             CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCC
Confidence            3799999999999999999999999999765322211 1112235678999999988888999999999999999986 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||......+.....+.+.  ...+......+.++..+|            +++++|+..
T Consensus       274 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~  334 (338)
T cd05102         274 ASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDL  334 (338)
T ss_pred             CCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            89987543322222222222  111222334566777777            787887754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=3.7e-21  Score=141.36  Aligned_cols=84  Identities=31%  Similarity=0.449  Sum_probs=72.1

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CC-cccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-IS-VKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~-~~~dv~s~G~~l~el~~~   78 (137)
                      |+|||||++|++++.+ +.+|++|||++.... .........+||+.|+|||++.+.. |+ .++|+||+|++++.|++|
T Consensus       141 i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G  219 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNEGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCG  219 (370)
T ss_pred             EeeCCCCHHHEEecCCCCCEEEeccccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhC
Confidence            7999999999999999 999999999998763 1222344567999999999999877 75 679999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       220 ~~PF~d~~  227 (370)
T KOG0583|consen  220 RLPFDDSN  227 (370)
T ss_pred             CCCCCCcc
Confidence            99998743

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=7.2e-22  Score=142.99  Aligned_cols=93  Identities=30%  Similarity=0.401  Sum_probs=73.6

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC---CcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI---SVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~---~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+|||+..+   ..+|++|||+++...  ......+.+||+.|.|||++.+...   ..++|+||+||+++-+
T Consensus       297 I~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvc  374 (475)
T KOG0615|consen  297 IIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVC  374 (475)
T ss_pred             cccccCCcceEEeccCCcceEEEecccchhhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEE
Confidence            7999999999999865   778999999999864  3334556789999999999976553   3478999999999999


Q ss_pred             Hhcccchhhhhcchhhhhhcc
Q 042492           76 EIVLINWAYKCFIDREFNKLV   96 (137)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~   96 (137)
                      ++|.+||..........+++.
T Consensus       375 LsG~pPFS~~~~~~sl~eQI~  395 (475)
T KOG0615|consen  375 LSGYPPFSEEYTDPSLKEQIL  395 (475)
T ss_pred             eccCCCcccccCCccHHHHHh
Confidence            999999987654332333443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=3.6e-21  Score=144.52  Aligned_cols=113  Identities=27%  Similarity=0.396  Sum_probs=88.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |||||||-.|++++.+.++||+|||++..+.....+ ..+.+||+-|.|||++....++..+||||+||++|.|+.|.+|
T Consensus       139 IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er-k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PP  217 (592)
T KOG0575|consen  139 IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER-KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPP  217 (592)
T ss_pred             ceecccchhheeecCcCcEEecccceeeeecCcccc-cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCC
Confidence            899999999999999999999999999987544333 3456799999999999988889999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHHh
Q 042492           82 WAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~C  116 (137)
                      |......+ .+..+...    +.....++++++.-.|.=
T Consensus       218 Fetk~vke-ty~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  218 FETKTVKE-TYNKIKLNEYSMPSHLSAEAKDLIRKLLRP  255 (592)
T ss_pred             cccchHHH-HHHHHHhcCcccccccCHHHHHHHHHHhcC
Confidence            98765533 34444333    334456666666544443

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=5.4e-21  Score=141.27  Aligned_cols=85  Identities=29%  Similarity=0.385  Sum_probs=74.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||||.+|||++.+|.+||+|||+++.+........+...-|.+|.+||.+.+ ..|+.++|+||.||++.||..|..
T Consensus       239 vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkP  318 (560)
T KOG0600|consen  239 VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKP  318 (560)
T ss_pred             eeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCC
Confidence            7899999999999999999999999999886665555666667999999998875 468999999999999999988888


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      .+....
T Consensus       319 I~~G~t  324 (560)
T KOG0600|consen  319 ILQGRT  324 (560)
T ss_pred             CcCCcc
Confidence            776544

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.83  E-value=2.7e-21  Score=138.00  Aligned_cols=85  Identities=31%  Similarity=0.370  Sum_probs=72.0

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+|+|+|.+ +.+||||||.++.+..+..+  .+++.|..|.|||.+.+ ..|+.+.|+||.||++.||+.|.
T Consensus       146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~  223 (364)
T KOG0658|consen  146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQ  223 (364)
T ss_pred             cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCC
Confidence            7999999999999965 88899999999988655554  45568899999998865 55899999999999999999998


Q ss_pred             cchhhhhcc
Q 042492           80 INWAYKCFI   88 (137)
Q Consensus        80 ~~~~~~~~~   88 (137)
                      .-|......
T Consensus       224 plFpG~s~~  232 (364)
T KOG0658|consen  224 PLFPGDSSV  232 (364)
T ss_pred             cccCCCCHH
Confidence            888765443

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.83  E-value=7.1e-21  Score=139.52  Aligned_cols=112  Identities=26%  Similarity=0.340  Sum_probs=88.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+.||+||+|||+|+.|+++|+|+|++..+......  ....||.+|||||++.+..|+..+|.||+||++|||..|..|
T Consensus       308 iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sP  385 (591)
T KOG0986|consen  308 IVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSP  385 (591)
T ss_pred             eeeccCChhheeeccCCCeEeeccceEEecCCCCcc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCc
Confidence            789999999999999999999999999887555443  334699999999999999999999999999999999999999


Q ss_pred             hhhhhc--chhhhhhccCC-----ccccHHHHHHHHHHHHHh
Q 042492           82 WAYKCF--IDREFNKLVHD-----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~C  116 (137)
                      |.....  ..+++...+-.     .+...++.+.+++ +|++
T Consensus       386 Fr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eakslc~-~LL~  426 (591)
T KOG0986|consen  386 FRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSLCE-GLLT  426 (591)
T ss_pred             hhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHHHH-HHHc
Confidence            977553  33455444422     3344566777666 4444

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=7.1e-21  Score=144.46  Aligned_cols=112  Identities=26%  Similarity=0.389  Sum_probs=87.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+|+||+....+||+|||++.+..++.  ...+.+|++.|++||++.+.+| ..++||||+||+++.|++|.+
T Consensus       133 icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk--lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L  210 (786)
T KOG0588|consen  133 ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK--LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL  210 (786)
T ss_pred             ceeccCCchhhhhhcccCEeeeccceeecccCCc--cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC
Confidence            7999999999999998889999999998764433  2345679999999999999998 467999999999999999999


Q ss_pred             chhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~C  116 (137)
                      ||.... .+..+.++..+    +.+...+.+.++.-++--
T Consensus       211 PFdDdN-ir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~V  249 (786)
T KOG0588|consen  211 PFDDDN-IRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDV  249 (786)
T ss_pred             CCCCcc-HHHHHHHHHcCcccCCCcCCHHHHHHHHHHhcc
Confidence            998332 22333333333    455667777777766655

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=3.5e-21  Score=137.83  Aligned_cols=84  Identities=36%  Similarity=0.608  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCC--CCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMP--DQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||||++|||++. ++.+||+|||+++....  ..........||+.|||||++..+.. ..++|+||+||++.||.+
T Consensus       138 ~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T  217 (313)
T KOG0198|consen  138 IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT  217 (313)
T ss_pred             EeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC
Confidence            799999999999999 79999999999886642  11122234669999999999985433 348999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       218 g~~PW~~~  225 (313)
T KOG0198|consen  218 GKPPWSEF  225 (313)
T ss_pred             CCCcchhh
Confidence            99999863

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.82  E-value=5.5e-21  Score=143.31  Aligned_cols=85  Identities=34%  Similarity=0.575  Sum_probs=76.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+||+||++++++.+|+||||++|.... .+...+...||+.|||||...+.+|+..+|.||+||++||+..|..|
T Consensus       121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP  199 (808)
T KOG0597|consen  121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP  199 (808)
T ss_pred             cccccCCcceeeecCCCceeechhhhhhhccc-CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence            78999999999999999999999999997644 34455667799999999999999999999999999999999999999


Q ss_pred             hhhhhc
Q 042492           82 WAYKCF   87 (137)
Q Consensus        82 ~~~~~~   87 (137)
                      |.....
T Consensus       200 F~a~si  205 (808)
T KOG0597|consen  200 FYARSI  205 (808)
T ss_pred             chHHHH
Confidence            986654

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.81  E-value=1.6e-20  Score=134.03  Aligned_cols=85  Identities=25%  Similarity=0.337  Sum_probs=71.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc------ceeeecccccceecccccCCCCCCcccceeeHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLE   74 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~e   74 (137)
                      .|+||||||+||+++.++.++++|||+++.+.....      .......||..|+|||...+..++.++|+||+|++++|
T Consensus       146 ~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e  225 (294)
T PHA02882        146 GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK  225 (294)
T ss_pred             CeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            379999999999999999999999999986532211      11122358999999999988889999999999999999


Q ss_pred             HHhcccchhhh
Q 042492           75 IEIVLINWAYK   85 (137)
Q Consensus        75 l~~~~~~~~~~   85 (137)
                      |.+|..||...
T Consensus       226 l~~g~~P~~~~  236 (294)
T PHA02882        226 WAGIKLPWKGF  236 (294)
T ss_pred             HHhCCCCCCcc
Confidence            99999999754

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.81  E-value=1.8e-20  Score=135.31  Aligned_cols=85  Identities=31%  Similarity=0.372  Sum_probs=71.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+|++|||+++....... ......|++.|+|||++.+..++.++|+||+||+++||.+|..
T Consensus       121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~  199 (323)
T cd05616         121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA  199 (323)
T ss_pred             CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCC
Confidence            379999999999999999999999999875432221 2233458999999999998889999999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       200 Pf~~~~  205 (323)
T cd05616         200 PFEGED  205 (323)
T ss_pred             CCCCCC
Confidence            997543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.6e-20  Score=133.95  Aligned_cols=84  Identities=32%  Similarity=0.423  Sum_probs=70.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~p  192 (312)
T cd05585         114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD-KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPP  192 (312)
T ss_pred             eEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCC
Confidence            79999999999999999999999999875422221 12334589999999999888899999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       193 f~~~~  197 (312)
T cd05585         193 FYDEN  197 (312)
T ss_pred             cCCCC
Confidence            97543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.81  E-value=1.6e-20  Score=135.64  Aligned_cols=83  Identities=28%  Similarity=0.418  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++....... ......|++.|+|||.+.+..++.++|+||+||+++||.+|..|
T Consensus       116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~P  194 (323)
T cd05571         116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  194 (323)
T ss_pred             eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCC
Confidence            79999999999999999999999999875322211 12234589999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       195 f~~~  198 (323)
T cd05571         195 FYNQ  198 (323)
T ss_pred             CCCC
Confidence            9653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.6e-20  Score=136.67  Aligned_cols=84  Identities=32%  Similarity=0.397  Sum_probs=74.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      .+|||+|..||++...|.+|++|||++-.+....... ....||+.|||||++....|+.|+||||+|++.+||.+|..|
T Consensus       132 kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP  210 (467)
T KOG0201|consen  132 KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPP  210 (467)
T ss_pred             eecccccccceeEeccCcEEEEecceeeeeechhhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCC
Confidence            4899999999999999999999999998776555444 455699999999999988999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       211 ~s~~h  215 (467)
T KOG0201|consen  211 HSKLH  215 (467)
T ss_pred             CcccC
Confidence            97654

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.81  E-value=3.1e-20  Score=136.68  Aligned_cols=85  Identities=26%  Similarity=0.391  Sum_probs=70.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC----CCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP----ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++..............||..|+|||.+.+..    ++.++|+||+|+++++|.+
T Consensus       163 IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~  242 (370)
T cd05621         163 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV  242 (370)
T ss_pred             eEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence            799999999999999999999999999876433322233456899999999886532    6789999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       243 G~~Pf~~~~  251 (370)
T cd05621         243 GDTPFYADS  251 (370)
T ss_pred             CCCCCCCCC
Confidence            999997543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.80  E-value=3.1e-21  Score=148.56  Aligned_cols=125  Identities=22%  Similarity=0.338  Sum_probs=96.7

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeeccc--ccceecccccCCCCCCcccceeeHHHHHHHHH-hcc
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG--TRGYMAPEWSKNTPISVKANVFNYGVVLLEIE-IVL   79 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~--~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~-~~~   79 (137)
                      +||||..+|||++.+-.||++|||++|.+........+...|  ..+|+|||.+...+|+.++|+||||+++||++ .|.
T Consensus       753 VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE  832 (996)
T KOG0196|consen  753 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE  832 (996)
T ss_pred             hhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence            799999999999999999999999999774333222222222  35899999999999999999999999999975 466


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      .||-.. ..++-+..+-++  -+.+.+++..+.+++|.|            +++.+|++..+.
T Consensus       833 RPYWdm-SNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  833 RPYWDM-SNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             Cccccc-chHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            675322 223344555555  567889999999999999            999998876444

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.80  E-value=4.6e-20  Score=135.79  Aligned_cols=85  Identities=26%  Similarity=0.378  Sum_probs=70.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC----CCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP----ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++..............||+.|+|||++.+..    ++.++|+||+||+++||.+
T Consensus       163 ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~  242 (371)
T cd05622         163 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  242 (371)
T ss_pred             EEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence            799999999999999999999999999876433222233456899999999986532    6789999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       243 G~~Pf~~~~  251 (371)
T cd05622         243 GDTPFYADS  251 (371)
T ss_pred             CCCCCCCCC
Confidence            999997543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=7.8e-20  Score=129.82  Aligned_cols=83  Identities=31%  Similarity=0.427  Sum_probs=71.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++++|||+++.......  .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       122 ~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~  199 (285)
T cd05631         122 RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQS  199 (285)
T ss_pred             CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCC
Confidence            379999999999999999999999999986532221  223458999999999998889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 pf~~~  204 (285)
T cd05631         200 PFRKR  204 (285)
T ss_pred             CCCCC
Confidence            99754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.80  E-value=4.9e-20  Score=132.83  Aligned_cols=84  Identities=31%  Similarity=0.401  Sum_probs=71.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+||+|||+++...... .......|+..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       116 ~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~  194 (316)
T cd05592         116 GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS  194 (316)
T ss_pred             CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCC
Confidence            37999999999999999999999999997643222 22233458999999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       195 Pf~~~  199 (316)
T cd05592         195 PFHGE  199 (316)
T ss_pred             CCCCC
Confidence            99754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.80  E-value=5.4e-20  Score=133.79  Aligned_cols=125  Identities=25%  Similarity=0.295  Sum_probs=86.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||.||+++.++.++|+|||+++.+....... .....++..|+|||.+.+..++.++|+||+||+++|+.+ |
T Consensus       193 ~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g  272 (337)
T cd05054         193 KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLG  272 (337)
T ss_pred             CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999998653222111 122235668999999988889999999999999999986 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||......+.....+...  ...+.....++.++..+|            +++++|+..
T Consensus       273 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~  333 (337)
T cd05054         273 ASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL  333 (337)
T ss_pred             CCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            88886433222111111111  111222334567777888            777777754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.80  E-value=6.2e-20  Score=132.58  Aligned_cols=84  Identities=29%  Similarity=0.358  Sum_probs=70.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++++|||+++....... ......|+..|+|||++.+..++.++|+||+|+++++|.+|..
T Consensus       121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~  199 (324)
T cd05587         121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP  199 (324)
T ss_pred             CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCC
Confidence            379999999999999999999999999875322221 2234458999999999998888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 pf~~~  204 (324)
T cd05587         200 PFDGE  204 (324)
T ss_pred             CCCCC
Confidence            99644

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.80  E-value=3e-20  Score=128.30  Aligned_cols=85  Identities=27%  Similarity=0.355  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||.|+|++.+|.+|++|||+++.+.+..... +...-|.+|.|||.+.+ ..|+..+|+||.||++.||+.+..
T Consensus       122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P  200 (318)
T KOG0659|consen  122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVP  200 (318)
T ss_pred             hhcccCCccceEEcCCCcEEeecccchhccCCCCccc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCC
Confidence            7899999999999999999999999999886544322 22357889999998865 458899999999999999977766


Q ss_pred             chhhhhc
Q 042492           81 NWAYKCF   87 (137)
Q Consensus        81 ~~~~~~~   87 (137)
                      -|.....
T Consensus       201 ~fpG~sD  207 (318)
T KOG0659|consen  201 FFPGDSD  207 (318)
T ss_pred             CCCCCch
Confidence            6655443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=2.4e-20  Score=132.93  Aligned_cols=87  Identities=30%  Similarity=0.387  Sum_probs=73.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-cceeeecccccceecccccC-CCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||+||.|++++.+...|++|||++|...... ....+.+..|.+|.|||++. ...|+...|+||.||++.||++|.
T Consensus       146 ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk  225 (359)
T KOG0660|consen  146 VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK  225 (359)
T ss_pred             ccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC
Confidence            7999999999999999999999999999874321 22235677899999999875 456899999999999999999999


Q ss_pred             cchhhhhcc
Q 042492           80 INWAYKCFI   88 (137)
Q Consensus        80 ~~~~~~~~~   88 (137)
                      .-|......
T Consensus       226 plFpG~d~v  234 (359)
T KOG0660|consen  226 PLFPGKDYV  234 (359)
T ss_pred             CCCCCCchH
Confidence            988876543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.80  E-value=2.7e-20  Score=132.38  Aligned_cols=84  Identities=29%  Similarity=0.381  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+|++++.++..|++|||+++....+. ...+...+|.+|.|||++.+. .|+...|+||+||++.||.++..
T Consensus       141 IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~  219 (323)
T KOG0594|consen  141 ILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRP  219 (323)
T ss_pred             eecccCCcceEEECCCCcEeeeccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCC
Confidence            7999999999999999999999999999654222 224556688999999998776 68999999999999999977666


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      -|....
T Consensus       220 LFpG~s  225 (323)
T KOG0594|consen  220 LFPGDS  225 (323)
T ss_pred             CCCCCc
Confidence            665433

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.80  E-value=9e-20  Score=134.37  Aligned_cols=124  Identities=25%  Similarity=0.324  Sum_probs=85.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.++|+|||+++......... .....++..|+|||++.+..++.++|+||+|+++++|.+ |
T Consensus       232 giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G  311 (374)
T cd05106         232 NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG  311 (374)
T ss_pred             CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCC
Confidence            37999999999999999999999999987653322211 112224567999999988889999999999999999986 8


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||....... .+......   .........++.++..+|            +++++|+.+
T Consensus       312 ~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         312 KSPYPGILVNS-KFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             CCCCccccccH-HHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            89986543322 22222211   111111124455666667            888888764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.80  E-value=6e-20  Score=133.04  Aligned_cols=83  Identities=29%  Similarity=0.418  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++...... .......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~P  194 (328)
T cd05593         116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  194 (328)
T ss_pred             eEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCC
Confidence            7999999999999999999999999987532211 112334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       195 f~~~  198 (328)
T cd05593         195 FYNQ  198 (328)
T ss_pred             CCCC
Confidence            9643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.80  E-value=4.2e-20  Score=133.27  Aligned_cols=83  Identities=33%  Similarity=0.447  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+.+..++.++|+||+||+++||.+|..|
T Consensus       117 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  195 (321)
T cd05603         117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE-TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPP  195 (321)
T ss_pred             eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCC
Confidence            79999999999999999999999999875322211 12334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (321)
T cd05603         196 FYSR  199 (321)
T ss_pred             CCCC
Confidence            9654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=7.9e-20  Score=132.05  Aligned_cols=83  Identities=29%  Similarity=0.391  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++........ .....|+..|+|||.+.+..++.++|+||+|++++||.+|..|
T Consensus       121 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~p  199 (323)
T cd05584         121 IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV-THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPP  199 (323)
T ss_pred             eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc-ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCC
Confidence            799999999999999999999999998754322221 2234589999999999888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       200 f~~~  203 (323)
T cd05584         200 FTAE  203 (323)
T ss_pred             CCCC
Confidence            9654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.80  E-value=5.3e-20  Score=139.04  Aligned_cols=82  Identities=29%  Similarity=0.383  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |||.||||+||||..  ...+||+|||.+....   .. ...++.+..|.|||++.+.+|+.+.|+|||||++.||.+|.
T Consensus       310 IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~---q~-vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~  385 (586)
T KOG0667|consen  310 IIHCDLKPENILLKDPKRSRIKVIDFGSSCFES---QR-VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE  385 (586)
T ss_pred             eeeccCChhheeeccCCcCceeEEecccccccC---Cc-ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc
Confidence            899999999999974  3468999999987542   11 22667899999999999999999999999999999999997


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .-|.....
T Consensus       386 PLfpG~ne  393 (586)
T KOG0667|consen  386 PLFPGDNE  393 (586)
T ss_pred             cccCCCCH
Confidence            77765543

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.80  E-value=7.4e-20  Score=132.04  Aligned_cols=84  Identities=27%  Similarity=0.354  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P  195 (321)
T cd05591         117 VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP  195 (321)
T ss_pred             eeccCCCHHHeEECCCCCEEEeecccceecccCCc-cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCC
Confidence            79999999999999999999999999875432221 12334589999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       196 f~~~~  200 (321)
T cd05591         196 FEADN  200 (321)
T ss_pred             CCCCC
Confidence            97543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.79  E-value=4.8e-20  Score=135.12  Aligned_cols=85  Identities=32%  Similarity=0.421  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----------------------------------ceeeecccccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----------------------------------RTFTLIRGTRG   47 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----------------------------------~~~~~~~~~~~   47 (137)
                      |+||||||+||+++.++.++|+|||+++.......                                  .......||..
T Consensus       122 ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~  201 (363)
T cd05628         122 FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPD  201 (363)
T ss_pred             eEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCcc
Confidence            79999999999999999999999999875421100                                  00123468999


Q ss_pred             eecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           48 YMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        48 ~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      |+|||.+.+..++.++|+||+||+++||.+|..||....
T Consensus       202 Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence            999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=6.2e-20  Score=145.62  Aligned_cols=113  Identities=23%  Similarity=0.413  Sum_probs=89.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el~   76 (137)
                      .|||||||+|||+|..|++|++|||.|-.+....+..+....|||-|.+||++.+     +.|..-+|.||+||++|||+
T Consensus       196 yVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl  275 (1317)
T KOG0612|consen  196 YVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML  275 (1317)
T ss_pred             ceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence            4899999999999999999999999998776555655566679999999998852     45788899999999999999


Q ss_pred             hcccchhhhhcchhhhhhccCC------c--cccHHHHHHHHHHHHHh
Q 042492           77 IVLINWAYKCFIDREFNKLVHD------E--EVNKKTLENMIKVRLWC  116 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~l~C  116 (137)
                      .|..||+.....+ .+.+|.+-      +  ....++++.++. +|.|
T Consensus       276 yG~TPFYadslve-TY~KIm~hk~~l~FP~~~~VSeeakdLI~-~ll~  321 (1317)
T KOG0612|consen  276 YGETPFYADSLVE-TYGKIMNHKESLSFPDETDVSEEAKDLIE-ALLC  321 (1317)
T ss_pred             cCCCcchHHHHHH-HHHHHhchhhhcCCCcccccCHHHHHHHH-HHhc
Confidence            9999998766543 44555433      1  123567777766 7888

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.79  E-value=3.6e-20  Score=133.87  Aligned_cols=83  Identities=28%  Similarity=0.414  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~P  195 (325)
T cd05594         117 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  195 (325)
T ss_pred             EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCC
Confidence            79999999999999999999999999875422221 12234589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (325)
T cd05594         196 FYNQ  199 (325)
T ss_pred             CCCC
Confidence            9644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.79  E-value=1e-19  Score=136.93  Aligned_cols=125  Identities=25%  Similarity=0.374  Sum_probs=89.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCC-CcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-QTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |||||||+.||++.+++.+||.|||++..-..- .........|+..|||||++.   ..+|+..+||||||+++|||++
T Consensus       509 IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELlt  588 (678)
T KOG0193|consen  509 IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLT  588 (678)
T ss_pred             hhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHh
Confidence            899999999999999999999999998642111 111112234788899999885   4568999999999999999999


Q ss_pred             cccchhhhhcchhhhhh------ccCCccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           78 VLINWAYKCFIDREFNK------LVHDEEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      |..||.. ...++.+-.      .-|......+..++|.++.-.|            ++..+|+....
T Consensus       589 g~lPysi-~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  589 GELPYSI-QNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             CcCCcCC-CChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            9999982 222222111      1111344567777888888899            66665655433

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.79  E-value=7.2e-20  Score=132.33  Aligned_cols=83  Identities=29%  Similarity=0.422  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       116 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~P  194 (323)
T cd05595         116 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  194 (323)
T ss_pred             eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCC
Confidence            79999999999999999999999999875322211 12234589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       195 f~~~  198 (323)
T cd05595         195 FYNQ  198 (323)
T ss_pred             CCCC
Confidence            9644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.79  E-value=1.1e-19  Score=131.35  Aligned_cols=83  Identities=31%  Similarity=0.438  Sum_probs=70.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  195 (325)
T cd05602         117 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP  195 (325)
T ss_pred             eEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCC
Confidence            79999999999999999999999999875422221 12334589999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (325)
T cd05602         196 FYSR  199 (325)
T ss_pred             CCCC
Confidence            9643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.79  E-value=8.2e-20  Score=131.96  Aligned_cols=83  Identities=28%  Similarity=0.335  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       122 ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~p  200 (324)
T cd05589         122 IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD-RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESP  200 (324)
T ss_pred             eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC-cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCC
Confidence            79999999999999999999999999875422221 12334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 f~~~  204 (324)
T cd05589         201 FPGD  204 (324)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=7.1e-20  Score=139.34  Aligned_cols=85  Identities=33%  Similarity=0.448  Sum_probs=71.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+||+|||+++....... .......|++.|+|||.+.+..++.++|+||||+++|||.+|.
T Consensus       163 ~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~  242 (496)
T PTZ00283        163 HMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK  242 (496)
T ss_pred             CEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            489999999999999999999999999986532211 1123346899999999999888999999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       243 ~Pf~~~  248 (496)
T PTZ00283        243 RPFDGE  248 (496)
T ss_pred             CCCCCC
Confidence            999644

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.79  E-value=4.3e-20  Score=128.56  Aligned_cols=82  Identities=35%  Similarity=0.539  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC------CCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT------PISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~------~~~~~~dv~s~G~~l~el   75 (137)
                      |+|||+||+|||++++..++++|||++..+.++..  ....+||++|+|||.+...      .|+..+|.|++|++++.+
T Consensus       144 IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek--LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTL  221 (411)
T KOG0599|consen  144 IVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK--LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTL  221 (411)
T ss_pred             hhhcccChhheeeccccceEEeccceeeccCCchh--HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHH
Confidence            79999999999999999999999999988755443  3456799999999988532      366779999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      +.|..||...
T Consensus       222 LaGcpPFwHR  231 (411)
T KOG0599|consen  222 LAGCPPFWHR  231 (411)
T ss_pred             HcCCCchhHH
Confidence            9999998654

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.79  E-value=6.4e-20  Score=132.80  Aligned_cols=83  Identities=27%  Similarity=0.400  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++|+|||+++..............|+..|+|||.+.+. .++.++|+||+|++++||.+|..
T Consensus       126 ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~  205 (332)
T cd05614         126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGAS  205 (332)
T ss_pred             cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCC
Confidence            79999999999999999999999999876533322222334589999999998764 36788999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       206 pf~~  209 (332)
T cd05614         206 PFTL  209 (332)
T ss_pred             CCCC
Confidence            9964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.79  E-value=5e-20  Score=130.80  Aligned_cols=86  Identities=28%  Similarity=0.339  Sum_probs=71.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+|++|+|+...|.+|++|||++|.+.+.. ...+...-|.+|.|||.+.+.+ |+...|+||+||++.|+..+..
T Consensus       198 ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kP  276 (419)
T KOG0663|consen  198 ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKP  276 (419)
T ss_pred             eEecccchhheeeccCCcEEecccchhhhhcCCc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCC
Confidence            7999999999999999999999999999875442 2234445688999999887654 7899999999999999988877


Q ss_pred             chhhhhcc
Q 042492           81 NWAYKCFI   88 (137)
Q Consensus        81 ~~~~~~~~   88 (137)
                      -|......
T Consensus       277 lf~G~sE~  284 (419)
T KOG0663|consen  277 LFPGKSEI  284 (419)
T ss_pred             CCCCCchH
Confidence            77655443

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.79  E-value=9.6e-20  Score=141.14  Aligned_cols=111  Identities=23%  Similarity=0.277  Sum_probs=78.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--------eecccccceeccccc---CCCCCCcccceeeHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--------TLIRGTRGYMAPEWS---KNTPISVKANVFNYG   69 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--------~~~~~~~~~~ape~~---~~~~~~~~~dv~s~G   69 (137)
                      ||||||||.+|+|+..++..||||||.+.--....+...        .....|+.|.+||.+   .+.+++.|+|||++|
T Consensus       166 PiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG  245 (738)
T KOG1989|consen  166 PIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG  245 (738)
T ss_pred             ccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence            799999999999999999999999998753211111000        012368899999976   466789999999999


Q ss_pred             HHHHHHHhcccchhhhhcchhhhhhccCC----c--cccHHHHHHHHHHHHHh
Q 042492           70 VVLLEIEIVLINWAYKCFIDREFNKLVHD----E--EVNKKTLENMIKVRLWC  116 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~l~C  116 (137)
                      |++|-|+.+..||....     -..|++.    +  ..-.+.+..+++.+|.=
T Consensus       246 clLYkLCy~t~PFe~sg-----~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~  293 (738)
T KOG1989|consen  246 CLLYKLCYFTTPFEESG-----KLAILNGNYSFPPFPNYSDRLKDLIRTMLQP  293 (738)
T ss_pred             HHHHHHHHhCCCcCcCc-----ceeEEeccccCCCCccHHHHHHHHHHHHhcc
Confidence            99999999999997442     2334443    1  22345555555555544

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.79  E-value=1.3e-19  Score=130.77  Aligned_cols=83  Identities=28%  Similarity=0.362  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|++.|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (320)
T cd05590         117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK-TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAP  195 (320)
T ss_pred             eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCC
Confidence            79999999999999999999999999875422221 12334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (320)
T cd05590         196 FEAE  199 (320)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.79  E-value=1.2e-19  Score=131.26  Aligned_cols=83  Identities=33%  Similarity=0.430  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       122 ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p  200 (323)
T cd05615         122 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP  200 (323)
T ss_pred             eeccCCCHHHeEECCCCCEEEeccccccccCCCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCC
Confidence            79999999999999999999999999875422211 12234589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 f~~~  204 (323)
T cd05615         201 FDGE  204 (323)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.79  E-value=1.3e-19  Score=130.70  Aligned_cols=83  Identities=28%  Similarity=0.390  Sum_probs=70.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++...... .......|+..|+|||.+.+..++.++|+||+|++++||.+|..|
T Consensus       117 ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~P  195 (316)
T cd05620         117 IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence            7999999999999999999999999987532211 122345589999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (316)
T cd05620         196 FHGD  199 (316)
T ss_pred             CCCC
Confidence            9644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.79  E-value=1.3e-19  Score=131.32  Aligned_cols=85  Identities=29%  Similarity=0.413  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.++++|||+++..............|+..|+|||++.     ...++.++|+||+|++++||.
T Consensus       123 iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell  202 (332)
T cd05623         123 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEML  202 (332)
T ss_pred             eEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHh
Confidence            799999999999999999999999998765333322223345899999999885     345788999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       203 ~g~~Pf~~~~  212 (332)
T cd05623         203 YGETPFYAES  212 (332)
T ss_pred             cCCCCCCCCC
Confidence            9999997543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.79  E-value=2e-19  Score=127.94  Aligned_cols=126  Identities=19%  Similarity=0.279  Sum_probs=89.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++....... .......++..|++||.+.+..++.++|+||||++++||.+ |
T Consensus       143 ~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g  222 (291)
T cd05094         143 HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYG  222 (291)
T ss_pred             CeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence            379999999999999999999999999875432221 11222345778999999988888999999999999999988 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ..||...... .....+...  ..........+.++..+|            ++.++|+....
T Consensus       223 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         223 KQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             CCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            8888543321 122222222  122223345677888888            88888877633

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.78  E-value=2.8e-19  Score=129.53  Aligned_cols=80  Identities=30%  Similarity=0.409  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++......    ....|++.|+|||.+.+..++.++|+||+||++++|.+|..|
T Consensus       139 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  214 (329)
T PTZ00263        139 IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP  214 (329)
T ss_pred             eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCC
Confidence            7999999999999999999999999998653322    224589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       215 f~~~  218 (329)
T PTZ00263        215 FFDD  218 (329)
T ss_pred             CCCC
Confidence            9653

>PHA02988 hypothetical protein; Provisional

Probab=99.78  E-value=1.6e-19  Score=128.36  Aligned_cols=110  Identities=16%  Similarity=0.184  Sum_probs=79.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||+||+|++++.++.+|++|||+++......    ....++..|+|||.+.+  ..++.++|+||||+++|||.+|.
T Consensus       144 ~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~  219 (283)
T PHA02988        144 KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGK  219 (283)
T ss_pred             CCCCcCChhhEEECCCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCC
Confidence            4699999999999999999999999987653221    12347889999999875  57899999999999999999999


Q ss_pred             cchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+....++..   ...+......+.++..+|
T Consensus       220 ~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~li~~c  258 (283)
T PHA02988        220 IPFENLTT-KEIYDLIINKNNSLKLPLDCPLEIKCIVEAC  258 (283)
T ss_pred             CCCCCCCH-HHHHHHHHhcCCCCCCCCcCcHHHHHHHHHH
Confidence            99975432 2222233222   112223344556666677

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.78  E-value=1.7e-19  Score=132.66  Aligned_cols=86  Identities=26%  Similarity=0.350  Sum_probs=70.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC----CCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT----PISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----~~~~~~dv~s~G~~l~el~   76 (137)
                      .|+||||||+||+++.++.+||+|||+++..............|++.|+|||.+.+.    .++.++|+||+||+++||.
T Consensus       162 ~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell  241 (370)
T cd05596         162 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML  241 (370)
T ss_pred             CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH
Confidence            379999999999999999999999999886543222222344689999999988643    3678999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       242 tG~~Pf~~~~  251 (370)
T cd05596         242 VGDTPFYADS  251 (370)
T ss_pred             hCCCCcCCCC
Confidence            9999997544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.78  E-value=5.4e-20  Score=138.68  Aligned_cols=94  Identities=28%  Similarity=0.404  Sum_probs=79.5

Q ss_pred             CeEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ||||||||-+||++.+ .|.+||+|+|++.....+   .....+||+.|||||... ..|+..+||||||+.++||.++.
T Consensus       165 PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~e  240 (632)
T KOG0584|consen  165 PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSE  240 (632)
T ss_pred             CccccccccceEEEcCCcCceeecchhHHHHhhcc---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhcc
Confidence            8999999999999985 589999999999876322   234468999999999886 67899999999999999999999


Q ss_pred             cchhhhhcchhhhhhccCC
Q 042492           80 INWAYKCFIDREFNKLVHD   98 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~   98 (137)
                      .||.......+-+.++..+
T Consensus       241 YPYsEC~n~AQIYKKV~SG  259 (632)
T KOG0584|consen  241 YPYSECTNPAQIYKKVTSG  259 (632)
T ss_pred             CChhhhCCHHHHHHHHHcC
Confidence            9998766666667777665

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.78  E-value=2.3e-19  Score=129.62  Aligned_cols=83  Identities=33%  Similarity=0.461  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++...... .......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~p  195 (323)
T cd05575         117 IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS-KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPP  195 (323)
T ss_pred             eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCC
Confidence            7999999999999999999999999987532221 122334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (323)
T cd05575         196 FYSR  199 (323)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.5e-19  Score=133.12  Aligned_cols=113  Identities=29%  Similarity=0.412  Sum_probs=81.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc----eeeecccccceecccccCCCC---C-CcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR----TFTLIRGTRGYMAPEWSKNTP---I-SVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~---~-~~~~dv~s~G~~l~   73 (137)
                      ||||||||+|+|++.++.+||+|||++.........    ......||+.|+|||.+.++.   + +.+.||||+||++|
T Consensus       231 iiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLY  310 (576)
T KOG0585|consen  231 IIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLY  310 (576)
T ss_pred             eeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHH
Confidence            799999999999999999999999998765221110    011245999999999987632   2 46799999999999


Q ss_pred             HHHhcccchhhhhcchhhhhhccCC----ccc--cHHHHHHHHHHHHHh
Q 042492           74 EIEIVLINWAYKCFIDREFNKLVHD----EEV--NKKTLENMIKVRLWC  116 (137)
Q Consensus        74 el~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~l~C  116 (137)
                      -++.|..||..... -+.+.+++..    .+.  ..+..+.++ ..|+|
T Consensus       311 CllfG~~PF~~~~~-~~l~~KIvn~pL~fP~~pe~~e~~kDli-~~lL~  357 (576)
T KOG0585|consen  311 CLLFGQLPFFDDFE-LELFDKIVNDPLEFPENPEINEDLKDLI-KRLLE  357 (576)
T ss_pred             HhhhccCCcccchH-HHHHHHHhcCcccCCCcccccHHHHHHH-HHHhh
Confidence            99999999975432 3456677655    222  234444443 46777

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.78  E-value=1.8e-19  Score=132.87  Aligned_cols=85  Identities=29%  Similarity=0.363  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---------------------------------------------
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---------------------------------------------   36 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------   36 (137)
                      |+||||||+||+++.++.++++|||+++.+.....                                             
T Consensus       122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (381)
T cd05626         122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ  201 (381)
T ss_pred             eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence            79999999999999999999999998754310000                                             


Q ss_pred             -ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           37 -RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        37 -~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                       .......||..|+|||.+.+..++.++|+||+||+++||.+|..||....
T Consensus       202 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~  252 (381)
T cd05626         202 RCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT  252 (381)
T ss_pred             ccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC
Confidence             00112458999999999988888999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=9.6e-20  Score=133.96  Aligned_cols=86  Identities=30%  Similarity=0.374  Sum_probs=71.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-CCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +.|||+||+|||+..+..+||+|||++|...+...  .+.++.|.+|.|||++. ++.|+.+.|+||+||+++|+.....
T Consensus       131 fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrP  208 (538)
T KOG0661|consen  131 FFHRDLKPENILISGNDVIKIADFGLAREVRSKPP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRP  208 (538)
T ss_pred             cccccCChhheEecccceeEecccccccccccCCC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcc
Confidence            46999999999999999999999999998744333  56678999999999774 5678999999999999999977777


Q ss_pred             chhhhhcch
Q 042492           81 NWAYKCFID   89 (137)
Q Consensus        81 ~~~~~~~~~   89 (137)
                      -|.+....+
T Consensus       209 LFPG~sE~D  217 (538)
T KOG0661|consen  209 LFPGASEID  217 (538)
T ss_pred             cCCCCcHHH
Confidence            776655444

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.78  E-value=4.6e-19  Score=130.61  Aligned_cols=123  Identities=26%  Similarity=0.318  Sum_probs=84.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.++++|||+++......... .....++..|+|||.+.+..++.++|+||||++++||.+ +
T Consensus       234 ~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g  313 (375)
T cd05104         234 NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG  313 (375)
T ss_pred             CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999998653322211 112224567999999988889999999999999999986 7


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ..||....... .+...+..   ...+.....++.++..+|            ++.++|+.
T Consensus       314 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         314 SSPYPGMPVDS-KFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             CCCCCCCCchH-HHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            78886433222 22222221   111112234566777778            77777764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.78  E-value=1.6e-19  Score=133.07  Aligned_cols=85  Identities=31%  Similarity=0.383  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC----------------------------------------------
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ----------------------------------------------   35 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~----------------------------------------------   35 (137)
                      |+||||||+||+++.++.+||+|||+++.+....                                              
T Consensus       122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (382)
T cd05625         122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ  201 (382)
T ss_pred             eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence            7999999999999999999999999975321000                                              


Q ss_pred             cceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           36 TRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        36 ~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      ........||+.|+|||++.+..++.++|+||+||+++||.+|..||....
T Consensus       202 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  252 (382)
T cd05625         202 RCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT  252 (382)
T ss_pred             cccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC
Confidence            000112358999999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=1.4e-19  Score=134.13  Aligned_cols=82  Identities=27%  Similarity=0.355  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++..............||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       203 IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p  282 (391)
T PHA03212        203 IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS  282 (391)
T ss_pred             cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            79999999999999999999999999875432222222344689999999999888899999999999999999999876


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      |.
T Consensus       283 ~~  284 (391)
T PHA03212        283 LF  284 (391)
T ss_pred             cC
Confidence            64

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.78  E-value=1.9e-19  Score=130.52  Aligned_cols=85  Identities=25%  Similarity=0.363  Sum_probs=70.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el   75 (137)
                      .|+||||||+||+++.++.+|++|||+++..............|+..|+|||++.+     ..++.++|+||+|+++++|
T Consensus       122 ~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el  201 (331)
T cd05624         122 HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM  201 (331)
T ss_pred             CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence            37999999999999999999999999998664333322233458999999998865     4567899999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       202 l~g~~Pf~~~  211 (331)
T cd05624         202 LYGETPFYAE  211 (331)
T ss_pred             hhCCCCccCC
Confidence            9999999654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.78  E-value=3.8e-19  Score=125.73  Aligned_cols=122  Identities=21%  Similarity=0.261  Sum_probs=86.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++....... .......++..|+|||.+.+..++.++|+||||++++||.+ |.
T Consensus       145 i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~  224 (283)
T cd05048         145 FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGL  224 (283)
T ss_pred             eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999876432211 11122335678999999988888999999999999999986 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      .||..... .+....+...  ...+.....++.++..+|            ++.+.|++
T Consensus       225 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         225 QPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            88864332 2222222222  222334456677777788            67776654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.78  E-value=3e-19  Score=130.14  Aligned_cols=80  Identities=30%  Similarity=0.417  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++.....    .....||+.|+|||++.+..++.++|+||+||+++||.+|..|
T Consensus       152 ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~P  227 (340)
T PTZ00426        152 IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPP  227 (340)
T ss_pred             eEccCCCHHHEEECCCCCEEEecCCCCeecCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCC
Confidence            799999999999999999999999999865321    1234589999999999888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       228 f~~~  231 (340)
T PTZ00426        228 FYAN  231 (340)
T ss_pred             CCCC
Confidence            9753

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.78  E-value=2.2e-19  Score=130.18  Aligned_cols=81  Identities=26%  Similarity=0.386  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||++.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~P  195 (329)
T cd05618         117 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC-ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCC
Confidence            79999999999999999999999999875322211 12234589999999999888889999999999999999999999


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      |.
T Consensus       196 f~  197 (329)
T cd05618         196 FD  197 (329)
T ss_pred             Cc
Confidence            95

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.78  E-value=2.7e-19  Score=135.58  Aligned_cols=85  Identities=27%  Similarity=0.378  Sum_probs=71.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+|++|||+++....... .......||+.|+|||++.+..++.++|+||+||++++|.+|.
T Consensus       189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~  268 (478)
T PTZ00267        189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLH  268 (478)
T ss_pred             CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCC
Confidence            389999999999999999999999999987643221 1123445899999999998888999999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       269 ~Pf~~~  274 (478)
T PTZ00267        269 RPFKGP  274 (478)
T ss_pred             CCCCCC
Confidence            998643

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.78  E-value=5.3e-19  Score=121.50  Aligned_cols=112  Identities=26%  Similarity=0.393  Sum_probs=86.3

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|||+||+|+++..   +--+|++|||++..+.  .........||+.|++||++...+++..+|+|+.|++++-++.|
T Consensus       131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G  208 (355)
T KOG0033|consen  131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  208 (355)
T ss_pred             ceeccCChhheeeeeccCCCceeecccceEEEeC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhC
Confidence            899999999999953   4457999999998775  33445566799999999999999999999999999999999999


Q ss_pred             ccchhhhhcchhhhhhccCC------cc--ccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD------EE--VNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~l~C  116 (137)
                      .+||..+... ..++++...      .+  ...++.+.+++-+|.-
T Consensus       209 ~~PF~~~~~~-rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~  253 (355)
T KOG0033|consen  209 YPPFWDEDQH-RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTV  253 (355)
T ss_pred             CCCCCCccHH-HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhcc
Confidence            9999764432 233444332      22  2357777777766655

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.77  E-value=1.2e-19  Score=131.17  Aligned_cols=83  Identities=33%  Similarity=0.460  Sum_probs=70.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++...... .......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~p  195 (325)
T cd05604         117 IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPP  195 (325)
T ss_pred             eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCC
Confidence            7999999999999999999999999987532211 122334589999999999988889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (325)
T cd05604         196 FYCR  199 (325)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.77  E-value=3.8e-19  Score=128.24  Aligned_cols=84  Identities=30%  Similarity=0.370  Sum_probs=70.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+||++++|.+|..
T Consensus       116 ~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~  194 (316)
T cd05619         116 GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA-KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQS  194 (316)
T ss_pred             CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCC
Confidence            379999999999999999999999999875422222 1223458999999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       195 pf~~~  199 (316)
T cd05619         195 PFHGH  199 (316)
T ss_pred             CCCCC
Confidence            99643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.77  E-value=1.7e-19  Score=143.53  Aligned_cols=114  Identities=25%  Similarity=0.332  Sum_probs=85.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec-CCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~-~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .|||||..+|+|++....+||+|||++|-. .....+......-...|||||.+..+.|+.|+|||||||++||+++ |.
T Consensus       823 fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~  902 (1025)
T KOG1095|consen  823 FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGA  902 (1025)
T ss_pred             CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCC
Confidence            689999999999999999999999999933 2222222222123468999999999999999999999999999976 66


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+-+..+...  -+.+.-++..+.+++++|
T Consensus       903 ~PY~~~~n-~~v~~~~~~ggRL~~P~~CP~~ly~lM~~C  940 (1025)
T KOG1095|consen  903 TPYPSRSN-FEVLLDVLEGGRLDPPSYCPEKLYQLMLQC  940 (1025)
T ss_pred             CCCCCcch-HHHHHHHHhCCccCCCCCCChHHHHHHHHH
Confidence            77764432 2223323333  456677888899999999

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.77  E-value=1.6e-19  Score=132.99  Aligned_cols=114  Identities=25%  Similarity=0.402  Sum_probs=86.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+|..||++.++..+++.|||+++.+.+.. .......||+.|++||.+.+.+|+.|+|+||+||+++||.+...+
T Consensus       127 iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~a  205 (426)
T KOG0589|consen  127 VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPA  205 (426)
T ss_pred             hhcccchhhhhhccccCceeecchhhhhhcCCch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccc
Confidence            7899999999999999999999999999885544 234456799999999999999999999999999999999998888


Q ss_pred             hhhhhcch---hhhhhccCC-ccccHHHHHHHHHHHHHh
Q 042492           82 WAYKCFID---REFNKLVHD-EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        82 ~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~l~C  116 (137)
                      |.......   ........+ +.-...+++.+++-+++=
T Consensus       206 F~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~  244 (426)
T KOG0589|consen  206 FKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLRK  244 (426)
T ss_pred             cCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhhc
Confidence            86544221   222222333 333345555555544444

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.77  E-value=2.8e-19  Score=129.41  Aligned_cols=82  Identities=26%  Similarity=0.373  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||++.+..++.++|+||+|+++++|.+|..|
T Consensus       117 ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~p  195 (327)
T cd05617         117 IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP  195 (327)
T ss_pred             eeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCC
Confidence            79999999999999999999999999875322221 12334589999999999888899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       196 f~~  198 (327)
T cd05617         196 FDI  198 (327)
T ss_pred             CCc
Confidence            953

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=2.4e-19  Score=133.23  Aligned_cols=85  Identities=27%  Similarity=0.328  Sum_probs=75.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||.||+||+|++++.+|.+|+.|||+++.+..+..  ..+++||+.|.|||++.+..++..+|.||+|++++||++|..|
T Consensus       541 iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K--TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pP  618 (732)
T KOG0614|consen  541 IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK--TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPP  618 (732)
T ss_pred             ceeccCChhheeeccCCceEEeehhhHHHhccCCc--eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999998754332  3356799999999999988889999999999999999999999


Q ss_pred             hhhhhcc
Q 042492           82 WAYKCFI   88 (137)
Q Consensus        82 ~~~~~~~   88 (137)
                      |......
T Consensus       619 Fs~~dpm  625 (732)
T KOG0614|consen  619 FSGVDPM  625 (732)
T ss_pred             CCCCchH
Confidence            9866543

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.77  E-value=7.1e-19  Score=127.43  Aligned_cols=81  Identities=26%  Similarity=0.384  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......|+..|+|||.+.+..++.++|+||+|++++++.+|..|
T Consensus       117 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~P  195 (329)
T cd05588         117 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             eEecCCCHHHeEECCCCCEEECcCccccccccCCC-ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCC
Confidence            79999999999999999999999999874322111 12334689999999999888889999999999999999999999


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      |.
T Consensus       196 f~  197 (329)
T cd05588         196 FD  197 (329)
T ss_pred             cc
Confidence            95

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=3e-19  Score=127.26  Aligned_cols=80  Identities=29%  Similarity=0.426  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++......    ....|++.|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       122 i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~p  197 (291)
T cd05612         122 IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP  197 (291)
T ss_pred             eeecCCCHHHeEECCCCCEEEEecCcchhccCCc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999987653211    223588999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       198 f~~~  201 (291)
T cd05612         198 FFDD  201 (291)
T ss_pred             CCCC
Confidence            9654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.77  E-value=2.9e-19  Score=126.61  Aligned_cols=85  Identities=28%  Similarity=0.386  Sum_probs=71.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+|++|||+++..............|+..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       120 ~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~  199 (287)
T cd07848         120 DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQP  199 (287)
T ss_pred             CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCC
Confidence            37999999999999999999999999998754322222233458899999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 pf~~~  204 (287)
T cd07848         200 LFPGE  204 (287)
T ss_pred             CCCCC
Confidence            99653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.77  E-value=2.6e-19  Score=127.03  Aligned_cols=82  Identities=26%  Similarity=0.355  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++......  ......|+..|+|||.+.+..++.++|+||+|++++||.++..|
T Consensus       131 iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~  208 (290)
T cd07862         131 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL  208 (290)
T ss_pred             eeeCCCCHHHEEEcCCCCEEEccccceEeccCCc--ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998653321  12234588999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       209 f~~~  212 (290)
T cd07862         209 FRGS  212 (290)
T ss_pred             cCCC
Confidence            8754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.77  E-value=4.3e-19  Score=128.00  Aligned_cols=83  Identities=29%  Similarity=0.362  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++........ .....|+..|+|||.+.+..++.++|+||+||++++|.+|..|
T Consensus       117 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~p  195 (318)
T cd05570         117 IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT-TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSP  195 (318)
T ss_pred             eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc-ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCC
Confidence            799999999999999999999999998753222221 2233588999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       196 f~~~  199 (318)
T cd05570         196 FEGD  199 (318)
T ss_pred             CCCC
Confidence            9643

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=2.5e-19  Score=130.28  Aligned_cols=85  Identities=33%  Similarity=0.486  Sum_probs=71.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC----------------------------cceeeecccccceecccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ----------------------------TRTFTLIRGTRGYMAPEW   53 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~~ape~   53 (137)
                      |+||||||+||+++.++.++++|||+++......                            ........|+..|+|||.
T Consensus       122 iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  201 (350)
T cd05573         122 FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEV  201 (350)
T ss_pred             eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence            7999999999999999999999999987654322                            011223458999999999


Q ss_pred             cCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           54 SKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        54 ~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      +.+..++.++|+||+||++++|.+|..||....
T Consensus       202 ~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         202 LRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             HcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence            988889999999999999999999999997544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.77  E-value=7.6e-19  Score=122.87  Aligned_cols=123  Identities=21%  Similarity=0.314  Sum_probs=84.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||+++..............++..|++||...+..++.++|+||+|++++++.+ |.
T Consensus       123 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~  202 (261)
T cd05072         123 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGK  202 (261)
T ss_pred             CeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCC
Confidence            37999999999999999999999999998754322211122235667999999988888889999999999999997 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      .||..... .+....+...  ..........+.++..+|            ++.++|+.
T Consensus       203 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         203 IPYPGMSN-SDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            89864321 1111111111  111112234566777777            67777764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=2.7e-19  Score=143.55  Aligned_cols=124  Identities=27%  Similarity=0.307  Sum_probs=91.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCC---CCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP---ISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~---~~~~~dv~s~G~~l~el   75 (137)
                      |+|||+|+.||+|+.+|.+|+.|||.+....++...   ......||+-|||||++.+..   ...++||||+|||++||
T Consensus      1355 IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM 1434 (1509)
T KOG4645|consen 1355 IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEM 1434 (1509)
T ss_pred             ceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEe
Confidence            799999999999999999999999999887554321   123456999999999987544   34679999999999999


Q ss_pred             HhcccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh---------HHHHHHhcC
Q 042492           76 EIVLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC---------SVVMMLEGI  125 (137)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C---------~v~~~L~~~  125 (137)
                      .+|..||..-...-+.+..+..+  +..+...-.+..+..-+|         .+.+.|+..
T Consensus      1435 ~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1435 ATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             ecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            99999998655433334333333  444444555556666677         455666653

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3.8e-19  Score=130.21  Aligned_cols=85  Identities=31%  Similarity=0.407  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-------------------------------------eeeeccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-------------------------------------TFTLIRG   44 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------~~~~~~~   44 (137)
                      |+||||||+||+++.++.++++|||+++.+......                                     ......|
T Consensus       122 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  201 (364)
T cd05599         122 YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVG  201 (364)
T ss_pred             eEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence            799999999999999999999999998754221100                                     0012358


Q ss_pred             ccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           45 TRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        45 ~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      |+.|+|||++....++.++|+||+||+++||.+|..||....
T Consensus       202 t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~  243 (364)
T cd05599         202 TPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN  243 (364)
T ss_pred             CccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC
Confidence            999999999988889999999999999999999999996543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=3e-19  Score=129.43  Aligned_cols=80  Identities=29%  Similarity=0.451  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....    ......|+..|+|||.+.+..++.++|+||+|++++||.+|..|
T Consensus       122 ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~p  197 (333)
T cd05600         122 YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPP  197 (333)
T ss_pred             ccccCCCHHHEEECCCCCEEEEeCcCCccccc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCC
Confidence            78999999999999999999999999876532    12334589999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       198 f~~~  201 (333)
T cd05600         198 FSGS  201 (333)
T ss_pred             CCCC
Confidence            9654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.76  E-value=7.6e-19  Score=123.16  Aligned_cols=123  Identities=23%  Similarity=0.318  Sum_probs=83.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||+++..............++..|++||...+..++.++|+||||++++||.+ |.
T Consensus       124 ~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~  203 (263)
T cd05052         124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM  203 (263)
T ss_pred             CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence            37999999999999999999999999987654322211111223557999999988888999999999999999987 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      .||..... ++....+...  ...+.....++.++..+|            ++.++|+.
T Consensus       204 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~  261 (263)
T cd05052         204 SPYPGIDL-SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET  261 (263)
T ss_pred             CCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence            88764332 1112222211  112222234456666677            77777764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=9.6e-19  Score=127.72  Aligned_cols=95  Identities=28%  Similarity=0.381  Sum_probs=79.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||.||||.+|++++..|++||+|||+++.-..... +..+.+||+-|+|||++...+|+..+|.||||++++||+.|..|
T Consensus       471 IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~-TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpP  549 (683)
T KOG0696|consen  471 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP  549 (683)
T ss_pred             eeeeeccccceEeccCCceEeeecccccccccCCc-ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999985422222 23456799999999999999999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC
Q 042492           82 WAYKCFIDREFNKLVHD   98 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~   98 (137)
                      |..+. +++.++.+.+.
T Consensus       550 FdGeD-E~elF~aI~eh  565 (683)
T KOG0696|consen  550 FDGED-EDELFQAIMEH  565 (683)
T ss_pred             CCCCC-HHHHHHHHHHc
Confidence            98654 34455666554

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.76  E-value=7.4e-19  Score=124.42  Aligned_cols=125  Identities=21%  Similarity=0.270  Sum_probs=86.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .++|||+||+||+++.++.+|++|||+++....... .......++..|++||...+..++.++|+||||+++||+.+ +
T Consensus       129 ~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g  208 (279)
T cd05111         129 RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYG  208 (279)
T ss_pred             CEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCC
Confidence            379999999999999999999999999986533222 11223346678999999988889999999999999999987 8


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ..||.....  ....+++..   ..........+..+..+|            ++.+.|+...+
T Consensus       209 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         209 AEPYAGMRP--HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CCCCCCCCH--HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            888864322  112222221   111111233456677788            66666666444

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=5.2e-19  Score=132.22  Aligned_cols=114  Identities=27%  Similarity=0.426  Sum_probs=88.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCC-----------CCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTP-----------ISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~-----------~~~~~dv~s~G   69 (137)
                      |||.||||.|.|+-+ |.+||+|||.+....+.++... ...+||+-||+||.+....           .+.++||||+|
T Consensus       481 IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG  559 (677)
T KOG0596|consen  481 IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG  559 (677)
T ss_pred             eeecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence            799999999999854 7899999999998876666543 4567999999999874322           46789999999


Q ss_pred             HHHHHHHhcccchhhhhcchhhhhhccCCc---cccH-HHHHHHHHHHHHh
Q 042492           70 VVLLEIEIVLINWAYKCFIDREFNKLVHDE---EVNK-KTLENMIKVRLWC  116 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~l~C  116 (137)
                      |++|+|..|..||..-...-..+..+.+++   +++. ....++++++..|
T Consensus       560 CILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~C  610 (677)
T KOG0596|consen  560 CILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCC  610 (677)
T ss_pred             hHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHH
Confidence            999999999999987665556778888872   2221 2222388888899

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.76  E-value=7e-19  Score=124.67  Aligned_cols=83  Identities=34%  Similarity=0.466  Sum_probs=70.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++........ .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       118 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~p  196 (280)
T cd05608         118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGP  196 (280)
T ss_pred             cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc-ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999998765433221 2234588999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       197 f~~~  200 (280)
T cd05608         197 FRAR  200 (280)
T ss_pred             CCCC
Confidence            9653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.76  E-value=1.8e-19  Score=130.29  Aligned_cols=86  Identities=29%  Similarity=0.386  Sum_probs=70.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC------CCCCCcccceeeHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK------NTPISVKANVFNYGVVLLE   74 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~------~~~~~~~~dv~s~G~~l~e   74 (137)
                      .|+||||||+||+++.++.+||+|||+++..............|++.|+|||++.      ...++.++|+||+|+++++
T Consensus       122 ~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e  201 (330)
T cd05601         122 GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE  201 (330)
T ss_pred             CeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence            3799999999999999999999999999876443333333345899999999886      3456789999999999999


Q ss_pred             HHhcccchhhhh
Q 042492           75 IEIVLINWAYKC   86 (137)
Q Consensus        75 l~~~~~~~~~~~   86 (137)
                      |.+|..||....
T Consensus       202 l~~g~~Pf~~~~  213 (330)
T cd05601         202 MIYGRSPFHEGT  213 (330)
T ss_pred             eccCCCCCCCCC
Confidence            999999996543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.76  E-value=1.9e-19  Score=139.40  Aligned_cols=123  Identities=21%  Similarity=0.239  Sum_probs=94.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCC-CCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .+||||-.+|+|+..+..+||+|||++|-.=. ...+......-..+||+||.+..++||.++|||||||++||+.+ |.
T Consensus       624 FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~  703 (774)
T KOG1026|consen  624 FVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGK  703 (774)
T ss_pred             ccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhcccc
Confidence            58999999999999999999999999985411 11111111123568999999999999999999999999999965 67


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||..-. .++-++.+.++  -+.+..++.++.++++.|            ++-..|...
T Consensus       704 QPy~glS-n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  704 QPYYGLS-NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             Ccccccc-hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            8886433 34445555555  466788899999999999            777777654

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.76  E-value=1.4e-18  Score=129.21  Aligned_cols=124  Identities=22%  Similarity=0.288  Sum_probs=87.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++........ ......++..|+|||.+.+..++.++|+||||++++|+.+ +.
T Consensus       258 ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~  337 (400)
T cd05105         258 CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG  337 (400)
T ss_pred             eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            799999999999999999999999998865332221 1122335678999999988888999999999999999986 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||......+.....+...  ..........+.++..+|            ++.++|+..
T Consensus       338 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l  397 (400)
T cd05105         338 TPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL  397 (400)
T ss_pred             CCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence            8886543222222222211  122223345677788888            777777754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=4.3e-19  Score=130.65  Aligned_cols=85  Identities=29%  Similarity=0.399  Sum_probs=68.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-------------c-------------------------------
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-------------R-------------------------------   37 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------------~-------------------------------   37 (137)
                      |+||||||+||+++.++.++++|||+++.......             .                               
T Consensus       122 ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (377)
T cd05629         122 FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNR  201 (377)
T ss_pred             eeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence            79999999999999999999999999863211000             0                               


Q ss_pred             --eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           38 --TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        38 --~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                        ......||+.|+|||++.+..++.++|+||+||+++||.+|..||....
T Consensus       202 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  252 (377)
T cd05629         202 RLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN  252 (377)
T ss_pred             cccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC
Confidence              0012358999999999988889999999999999999999999996543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.2e-19  Score=127.48  Aligned_cols=84  Identities=26%  Similarity=0.408  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.++|+|||+++..............|+..|+|||++..     ..++.++|+||+||++++|.
T Consensus       123 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~  202 (331)
T cd05597         123 YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEML  202 (331)
T ss_pred             eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHh
Confidence            7999999999999999999999999987654333222223458999999998863     34678899999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       203 ~g~~Pf~~~  211 (331)
T cd05597         203 YGETPFYAE  211 (331)
T ss_pred             hCCCCCCCC
Confidence            999999654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.76  E-value=9.5e-19  Score=119.98  Aligned_cols=116  Identities=19%  Similarity=0.190  Sum_probs=81.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCC---CCc-----ceeeecccccceecccccC---CCCCCcccceeeHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMP---DQT-----RTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYG   69 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~---~~~-----~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G   69 (137)
                      |..|||+||.||++..++.+.+.|||.+....-   ++.     ........|..|.|||.+.   +...+.++||||+|
T Consensus       149 ~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLG  228 (302)
T KOG2345|consen  149 PYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLG  228 (302)
T ss_pred             cccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhh
Confidence            568999999999999999999999998865421   111     1112344788999999874   34468899999999


Q ss_pred             HHHHHHHhcccchhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHHh
Q 042492           70 VVLLEIEIVLINWAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~C  116 (137)
                      |++|+|+.+..||...-...+.+...+..    -+....-.+.+.++..+|
T Consensus       229 CtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~m  279 (302)
T KOG2345|consen  229 CTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSM  279 (302)
T ss_pred             HHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHH
Confidence            99999999999998766544444444433    111122445556666666

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.76  E-value=2.7e-19  Score=131.62  Aligned_cols=85  Identities=31%  Similarity=0.379  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC------------------------------------------ccee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ------------------------------------------TRTF   39 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~------------------------------------------~~~~   39 (137)
                      |+||||||+||+++.++.++|+|||++..+....                                          ....
T Consensus       122 ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (376)
T cd05598         122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLA  201 (376)
T ss_pred             eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccc
Confidence            7999999999999999999999999875321000                                          0001


Q ss_pred             eecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           40 TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        40 ~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      ....||+.|+|||++.+..++.++|+||+||+++||.+|..||....
T Consensus       202 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  248 (376)
T cd05598         202 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT  248 (376)
T ss_pred             cccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC
Confidence            12458999999999988888999999999999999999999997544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.76  E-value=4e-19  Score=130.18  Aligned_cols=83  Identities=30%  Similarity=0.308  Sum_probs=70.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+|++|||+++......  ......++..|+|||.+.+..++.++|+||+||++++|.+|..
T Consensus       146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~  223 (364)
T cd07875         146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV  223 (364)
T ss_pred             CeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCC
Confidence            37999999999999999999999999997643221  1233458899999999988889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       224 pf~~~  228 (364)
T cd07875         224 LFPGT  228 (364)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.76  E-value=5.7e-19  Score=126.31  Aligned_cols=83  Identities=25%  Similarity=0.297  Sum_probs=65.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh--c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI--V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~--~   78 (137)
                      |+||||||+||+++.++.+|++|||+++......... .....++..|+|||.+.+..++.++|+||||++++||.+  +
T Consensus       159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~  238 (304)
T cd05096         159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK  238 (304)
T ss_pred             ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence            7899999999999999999999999988653322211 112235678999999888889999999999999999975  4


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       239 ~~p~~~  244 (304)
T cd05096         239 EQPYGE  244 (304)
T ss_pred             CCCCCc
Confidence            456653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00284 protein kinase; Provisional

Probab=99.76  E-value=3.5e-19  Score=134.53  Aligned_cols=79  Identities=25%  Similarity=0.332  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCC----------------cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccce
Q 042492            2 IIHCDIKPHNILMDEFW----------------TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANV   65 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv   65 (137)
                      ||||||||+||+++.++                .+||+|||.+.....    ......||..|+|||++.+..++.++|+
T Consensus       253 IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~Di  328 (467)
T PTZ00284        253 LMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDM  328 (467)
T ss_pred             eecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHH
Confidence            89999999999998654                489999998754321    1234468999999999998889999999


Q ss_pred             eeHHHHHHHHHhcccchhh
Q 042492           66 FNYGVVLLEIEIVLINWAY   84 (137)
Q Consensus        66 ~s~G~~l~el~~~~~~~~~   84 (137)
                      |||||++|||.+|..||..
T Consensus       329 wSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        329 WSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             HHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999964

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.76  E-value=2e-18  Score=120.78  Aligned_cols=84  Identities=27%  Similarity=0.393  Sum_probs=67.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||+++...............+..|++||...+..++.++|+||||++++++.+ +.
T Consensus       123 ~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~  202 (261)
T cd05068         123 NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGR  202 (261)
T ss_pred             CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCC
Confidence            37999999999999999999999999998764222111111122357999999988888999999999999999998 88


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       203 ~p~~~  207 (261)
T cd05068         203 MPYPG  207 (261)
T ss_pred             CCCCC
Confidence            88864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.76  E-value=5.7e-19  Score=129.18  Aligned_cols=82  Identities=30%  Similarity=0.360  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......++..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       144 ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~p  221 (359)
T cd07876         144 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI  221 (359)
T ss_pred             cccCCCCHHHEEECCCCCEEEecCCCccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999987542211  12234578899999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       222 f~~~  225 (359)
T cd07876         222 FQGT  225 (359)
T ss_pred             CCCC
Confidence            9643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.76  E-value=2.2e-19  Score=131.41  Aligned_cols=85  Identities=32%  Similarity=0.422  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----------------------------------ceeeecccccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----------------------------------RTFTLIRGTRG   47 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----------------------------------~~~~~~~~~~~   47 (137)
                      |+||||||+||+++.++.++++|||+++.......                                  .......||..
T Consensus       122 ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  201 (360)
T cd05627         122 FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD  201 (360)
T ss_pred             eEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCcc
Confidence            79999999999999999999999999875421100                                  00112458999


Q ss_pred             eecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           48 YMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        48 ~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      |+|||++.+..++.++|+||+||+++||.+|..||....
T Consensus       202 Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         202 YIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             ccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence            999999988889999999999999999999999996543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.75  E-value=8.2e-19  Score=124.08  Aligned_cols=114  Identities=20%  Similarity=0.245  Sum_probs=80.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||.||+++.++.+|++|||+++........ ......+++.|+|||.+.++.++.++|+||+|++++||.+ +.
T Consensus       145 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~  224 (283)
T cd05091         145 VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL  224 (283)
T ss_pred             ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999998765322211 1122235678999999988888999999999999999987 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+....+.+.  ..........+.++...|
T Consensus       225 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  262 (283)
T cd05091         225 QPYCGYSN-QDVIEMIRNRQVLPCPDDCPAWVYTLMLEC  262 (283)
T ss_pred             CCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            78764322 2223333333  222334445567777788

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=6.5e-19  Score=135.17  Aligned_cols=115  Identities=25%  Similarity=0.315  Sum_probs=88.7

Q ss_pred             CeEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~   77 (137)
                      .|+|||||.+|+|+. -+|.+||+|||.++.+..-+.-+ .++.||..|||||++..++  |..++|||||||++.||.+
T Consensus       695 ~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T-ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT  773 (1226)
T KOG4279|consen  695 KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT  773 (1226)
T ss_pred             ceeeccccCCcEEEeeccceEEecccccchhhccCCccc-cccccchhhhChHhhccCCcCCCchhhhhhccceeEeecc
Confidence            489999999999997 58999999999998764333222 3456999999999997654  6788999999999999999


Q ss_pred             cccchhhhhcchhhh--hhccCC-ccccHHHHHHHHHHHHHh
Q 042492           78 VLINWAYKCFIDREF--NKLVHD-EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~C  116 (137)
                      |..||..-...+..+  ..+... ++.+.+.-++.....++|
T Consensus       774 GrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Filrc  815 (1226)
T KOG4279|consen  774 GRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRC  815 (1226)
T ss_pred             CCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHH
Confidence            999998655443322  222222 556667777888899999

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.75  E-value=6.7e-19  Score=134.15  Aligned_cols=80  Identities=23%  Similarity=0.233  Sum_probs=67.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++.+............|+..|++||.+.+..++.++|+||+||+++||+++..+
T Consensus       288 IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        288 LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            79999999999999999999999999987643333222334689999999999888899999999999999999887643

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.75  E-value=1.4e-18  Score=124.99  Aligned_cols=85  Identities=27%  Similarity=0.314  Sum_probs=68.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.+|++|||+++......... .....++..|++||.+.+..++.++|+||||+++||+++ |
T Consensus       129 ~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g  208 (316)
T cd05108         129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  208 (316)
T ss_pred             CeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCC
Confidence            37999999999999999999999999998764322211 111223567999999988888999999999999999986 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       209 ~~p~~~~  215 (316)
T cd05108         209 SKPYDGI  215 (316)
T ss_pred             CCCCCCC
Confidence            8888643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.75  E-value=5.5e-19  Score=129.02  Aligned_cols=81  Identities=32%  Similarity=0.354  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++......  ......++..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       140 ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  217 (355)
T cd07874         140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL  217 (355)
T ss_pred             cccCCCChHHEEECCCCCEEEeeCcccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999997643221  12334588999999999888889999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       218 f~~  220 (355)
T cd07874         218 FPG  220 (355)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.2e-18  Score=124.01  Aligned_cols=84  Identities=30%  Similarity=0.366  Sum_probs=73.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+.||+|.+|++++++|++|+.|||+++.-..... .....+||+.|+|||++....|...+|.|.+|+++|||+.|++|
T Consensus       289 ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~-t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLP  367 (516)
T KOG0690|consen  289 IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD-TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLP  367 (516)
T ss_pred             eeeeechhhhheeccCCceEeeecccchhcccccc-eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCc
Confidence            78999999999999999999999999985422222 23456799999999999999999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       368 Fyn~d  372 (516)
T KOG0690|consen  368 FYNKD  372 (516)
T ss_pred             ccccc
Confidence            97543

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.75  E-value=2.8e-18  Score=120.39  Aligned_cols=114  Identities=20%  Similarity=0.292  Sum_probs=79.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||+|++++|+.+ +.
T Consensus       134 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~  213 (273)
T cd05035         134 FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQ  213 (273)
T ss_pred             eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999988653322211 111224567999999988888999999999999999988 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+.+..+.+.  ...+.....++.++..+|
T Consensus       214 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  251 (273)
T cd05035         214 TPYPGVEN-HEIYDYLRHGNRLKQPEDCLDELYDLMYSC  251 (273)
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCcCCCHHHHHHHHHH
Confidence            88854322 2222222222  112223344566666677

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.75  E-value=2.4e-18  Score=121.58  Aligned_cols=84  Identities=27%  Similarity=0.339  Sum_probs=67.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.++++|||+++......... .....++..|++||...+..++.++|+||||+++||+.+ +
T Consensus       129 ~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g  208 (279)
T cd05109         129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFG  208 (279)
T ss_pred             CeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999998764322211 111224567999999988888999999999999999987 7


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       209 ~~p~~~  214 (279)
T cd05109         209 AKPYDG  214 (279)
T ss_pred             CCCCCC
Confidence            888854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.75  E-value=6e-19  Score=126.21  Aligned_cols=83  Identities=25%  Similarity=0.358  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++...... .......++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       124 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  202 (303)
T cd07869         124 ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVA  202 (303)
T ss_pred             eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999987542221 12223457889999998765 446888999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       203 pf~~~  207 (303)
T cd07869         203 AFPGM  207 (303)
T ss_pred             CCCCC
Confidence            99653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.75  E-value=2.3e-18  Score=122.31  Aligned_cols=114  Identities=25%  Similarity=0.252  Sum_probs=79.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||.||+++.++.++++|||+++......... .....++..|++||...+..++.++|+||||++++|+.+ |.
T Consensus       153 ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  232 (293)
T cd05053         153 CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG  232 (293)
T ss_pred             ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCC
Confidence            7999999999999999999999999998654322211 111224567999999888888999999999999999976 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||...... +....+...  ...+......+.++..+|
T Consensus       233 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~  270 (293)
T cd05053         233 SPYPGIPVE-ELFKLLKEGYRMEKPQNCTQELYHLMRDC  270 (293)
T ss_pred             CCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            887643321 112222111  122223345667777888

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.75  E-value=1.5e-18  Score=122.43  Aligned_cols=115  Identities=19%  Similarity=0.273  Sum_probs=78.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .++|||+||+||+++.++.++++|||+++......... .....++..|+|||.+.+..++.++|+||||++++|+.+ +
T Consensus       139 ~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~  218 (277)
T cd05062         139 KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA  218 (277)
T ss_pred             CcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCC
Confidence            37999999999999999999999999987543222111 111234668999999988888999999999999999987 6


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ..||..... ......+...  ..........+.++..+|
T Consensus       219 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  257 (277)
T cd05062         219 EQPYQGMSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMC  257 (277)
T ss_pred             CCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            788864332 1222222222  112222334566677777

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.74  E-value=2.9e-18  Score=120.90  Aligned_cols=84  Identities=25%  Similarity=0.322  Sum_probs=67.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++....... .......++..|+|||.+.+..++.++|+||+|++++||.+ |.
T Consensus       143 i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~  222 (280)
T cd05049         143 FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK  222 (280)
T ss_pred             eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999875422211 11122235678999999988889999999999999999997 88


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       223 ~p~~~~  228 (280)
T cd05049         223 QPWYGL  228 (280)
T ss_pred             CCCCCC
Confidence            888643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.74  E-value=6.5e-19  Score=127.42  Aligned_cols=84  Identities=30%  Similarity=0.419  Sum_probs=68.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCC--CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .......|+..|+|||++.+  ..++.++|+||+|+++++|.+
T Consensus       124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~t  203 (338)
T cd07859         124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT  203 (338)
T ss_pred             eecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHc
Confidence            79999999999999999999999999875432211  11233458899999998865  567889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       204 g~~pf~~~  211 (338)
T cd07859         204 GKPLFPGK  211 (338)
T ss_pred             CCCCCCCC
Confidence            99998643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=6e-19  Score=127.70  Aligned_cols=83  Identities=29%  Similarity=0.438  Sum_probs=68.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+. .++.++|+||+|+++++|.+|..
T Consensus       117 ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~  195 (330)
T cd05586         117 IVYRDLKPENILLDATGHIALCDFGLSKANLTDNK-TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWS  195 (330)
T ss_pred             eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCC
Confidence            79999999999999999999999999875322211 12334589999999988654 47889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       196 Pf~~~  200 (330)
T cd05586         196 PFYAE  200 (330)
T ss_pred             CCCCC
Confidence            98654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1.4e-18  Score=127.08  Aligned_cols=87  Identities=29%  Similarity=0.395  Sum_probs=70.9

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee---eecccccceecccccC--CCCCCcccceeeHHHHHHHHHh
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF---TLIRGTRGYMAPEWSK--NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~---~~~~~~~~~~ape~~~--~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ||||+|+.|||++.+|.+||+|||++..+..+..+..   ....|+++|||||++.  ...|+.|+||||||++..|+..
T Consensus       148 IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~  227 (516)
T KOG0582|consen  148 IHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH  227 (516)
T ss_pred             eecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc
Confidence            8999999999999999999999998876543333221   3457999999999954  3458899999999999999999


Q ss_pred             cccchhhhhcch
Q 042492           78 VLINWAYKCFID   89 (137)
Q Consensus        78 ~~~~~~~~~~~~   89 (137)
                      |..||.......
T Consensus       228 G~aPf~k~pPmk  239 (516)
T KOG0582|consen  228 GHAPFSKYPPMK  239 (516)
T ss_pred             CCCCcccCChHH
Confidence            999997655433

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.74  E-value=5.5e-19  Score=127.30  Aligned_cols=83  Identities=34%  Similarity=0.473  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......|+..|++||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p  197 (318)
T cd05582         119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLP  197 (318)
T ss_pred             EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCC
Confidence            79999999999999999999999999876533211 12334589999999999888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       198 ~~~~  201 (318)
T cd05582         198 FQGK  201 (318)
T ss_pred             CCCC
Confidence            9654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.74  E-value=4.1e-18  Score=119.53  Aligned_cols=115  Identities=20%  Similarity=0.327  Sum_probs=80.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||.++..............++..|++||...+..++.++|+||+|++++++.+ +.
T Consensus       122 ~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~  201 (262)
T cd05071         122 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR  201 (262)
T ss_pred             CccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence            37999999999999999999999999987653322211112235667999999988888999999999999999998 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+....+...  ..........+.++..+|
T Consensus       202 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  239 (262)
T cd05071         202 VPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQC  239 (262)
T ss_pred             CCCCCCCh-HHHHHHHhcCCCCCCccccCHHHHHHHHHH
Confidence            78754322 1222222221  112233445567777777

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.74  E-value=8.9e-18  Score=118.89  Aligned_cols=83  Identities=28%  Similarity=0.294  Sum_probs=67.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++........  ......++..|++||......++.++|+||||+++++|.+|.
T Consensus       128 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~  207 (283)
T cd05080         128 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHC  207 (283)
T ss_pred             eeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCC
Confidence            799999999999999999999999998865332211  111223456799999998888899999999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       208 ~p~~~  212 (283)
T cd05080         208 DSKQS  212 (283)
T ss_pred             CCCCC
Confidence            88754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.74  E-value=2.8e-18  Score=119.23  Aligned_cols=114  Identities=23%  Similarity=0.251  Sum_probs=78.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++..............++..|++||++.+..++.++|+||+|++++++.+ +..
T Consensus       114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~  193 (250)
T cd05085         114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVC  193 (250)
T ss_pred             eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999987543222211112234567999999988888999999999999999987 888


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||...... .....+...  .........++.++..+|
T Consensus       194 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~  230 (250)
T cd05085         194 PYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRC  230 (250)
T ss_pred             CCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            88643221 111111111  112222345667777777

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.74  E-value=4.2e-18  Score=119.21  Aligned_cols=85  Identities=26%  Similarity=0.403  Sum_probs=68.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+|++||+++.++.++++|||+++..............++..|++||...+..++.++|+||+|++++++.+ |.
T Consensus       122 ~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~  201 (260)
T cd05069         122 NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR  201 (260)
T ss_pred             CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCC
Confidence            37999999999999999999999999987653322211122235667999999988888999999999999999998 88


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       202 ~p~~~~  207 (260)
T cd05069         202 VPYPGM  207 (260)
T ss_pred             CCCCCC
Confidence            888643

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.74  E-value=3.6e-18  Score=119.38  Aligned_cols=84  Identities=30%  Similarity=0.343  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+|||+||.||+++.++.++++|||+++..........  ....++..|++||.+....++.++|+||||++++|+.+ |
T Consensus       116 i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g  195 (257)
T cd05116         116 FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYG  195 (257)
T ss_pred             EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence            78999999999999999999999999886533322111  11223568999999887778889999999999999997 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       196 ~~p~~~~  202 (257)
T cd05116         196 QKPYKGM  202 (257)
T ss_pred             CCCCCCC
Confidence            8898643

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.74  E-value=1e-18  Score=131.26  Aligned_cols=82  Identities=30%  Similarity=0.413  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++ .+||+|||+++.......  .....|+..|+|||++.+ ..++.++|+||+||+++||.+|.
T Consensus       191 IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~  268 (440)
T PTZ00036        191 ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY  268 (440)
T ss_pred             EecCCcCHHHEEEcCCCCceeeeccccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            79999999999998654 699999999986533222  223457899999998765 45889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       269 ~pf~~~  274 (440)
T PTZ00036        269 PIFSGQ  274 (440)
T ss_pred             CCCCCC
Confidence            999654

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.74  E-value=1.6e-18  Score=124.50  Aligned_cols=83  Identities=25%  Similarity=0.345  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEe----CCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCC-CCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill----~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||++    +.++.+|++|||+++........  ......+|..|+|||++.+. .++.++|+||+||++++
T Consensus       129 ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (317)
T cd07868         129 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (317)
T ss_pred             EEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHH
Confidence            7999999999999    45678999999999865332211  12234578999999988764 47889999999999999


Q ss_pred             HHhcccchhh
Q 042492           75 IEIVLINWAY   84 (137)
Q Consensus        75 l~~~~~~~~~   84 (137)
                      |.+|..||..
T Consensus       209 l~~g~~~f~~  218 (317)
T cd07868         209 LLTSEPIFHC  218 (317)
T ss_pred             HHhCCCCccC
Confidence            9999999854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.74  E-value=2e-18  Score=126.09  Aligned_cols=82  Identities=29%  Similarity=0.497  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+|||||++||+++.++.+||+|||+++....... ......|+..|++||.+..     ...+.++|+|||||++|||.
T Consensus       189 ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~  267 (353)
T PLN00034        189 IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFY  267 (353)
T ss_pred             EeecCCCHHHEEEcCCCCEEEcccccceecccccc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHH
Confidence            79999999999999999999999999986532211 1223458999999998743     22346899999999999999


Q ss_pred             hcccchhh
Q 042492           77 IVLINWAY   84 (137)
Q Consensus        77 ~~~~~~~~   84 (137)
                      +|..||..
T Consensus       268 ~g~~pf~~  275 (353)
T PLN00034        268 LGRFPFGV  275 (353)
T ss_pred             hCCCCCCC
Confidence            99999973

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.74  E-value=3e-18  Score=121.75  Aligned_cols=125  Identities=19%  Similarity=0.269  Sum_probs=85.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .++|||+||+||+++.++.++++|||+++........ ......++..|+|||.+.+..++.++|+||||+++++|.+ +
T Consensus       140 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g  219 (288)
T cd05093         140 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG  219 (288)
T ss_pred             CeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCC
Confidence            3799999999999999999999999998755322211 1112234668999999988888999999999999999997 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      ..||..... .+....+...  ..........+.++..+|            ++.+.|+...
T Consensus       220 ~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         220 KQPWYQLSN-NEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             CCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            888864332 1222222222  111112234466777777            6767676543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.74  E-value=3.1e-18  Score=120.06  Aligned_cols=123  Identities=20%  Similarity=0.324  Sum_probs=86.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||+||+||+++.++.++++|||++........ ......++..|++||.+.+..++.++|+||+|++++++.++..|
T Consensus       127 i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p  205 (267)
T cd08228         127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             eeCCCCCHHHEEEcCCCCEEECccccceeccchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCC
Confidence            78999999999999999999999999886533221 11223477889999999888888999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           82 WAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      |.........+...+..    ..........+.++..+|            +|.+.|+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         206 FYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            86543222222222211    112223335566667777            666666654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.74  E-value=1.9e-18  Score=125.24  Aligned_cols=80  Identities=34%  Similarity=0.537  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++......   .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       125 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p  201 (331)
T cd06649         125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP  201 (331)
T ss_pred             EEcCCCChhhEEEcCCCcEEEccCcccccccccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999987653221   2234588999999999888899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       202 ~~~  204 (331)
T cd06649         202 IPP  204 (331)
T ss_pred             CCC
Confidence            854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.74  E-value=2.4e-18  Score=122.83  Aligned_cols=121  Identities=24%  Similarity=0.296  Sum_probs=81.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+|++|||++........  ......+..|++||...+..++.++|+||||++++||.+ |..
T Consensus       140 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~  217 (297)
T cd05089         140 FIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGT  217 (297)
T ss_pred             cccCcCCcceEEECCCCeEEECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999864321111  111123457999999988888999999999999999986 889


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||...... +....+...  ...+......+.++..+|            ++++.|+..
T Consensus       218 pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  275 (297)
T cd05089         218 PYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM  275 (297)
T ss_pred             CCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            98654322 112222211  111112223456677777            776666654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.74  E-value=2.9e-18  Score=120.45  Aligned_cols=84  Identities=21%  Similarity=0.321  Sum_probs=67.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++......... .....++..|++||...+..++.++|+||||++++|+.+ +
T Consensus       132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g  211 (272)
T cd05075         132 SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG  211 (272)
T ss_pred             CeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999988653322111 112235667999999988888999999999999999988 7


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       212 ~~p~~~  217 (272)
T cd05075         212 QTPYPG  217 (272)
T ss_pred             CCCCCC
Confidence            788854

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.73  E-value=3.4e-18  Score=132.84  Aligned_cols=116  Identities=22%  Similarity=0.258  Sum_probs=85.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeeccc--ccceecccccCCCCCCcccceeeHHHHHHHHHh-
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG--TRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~--~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-   77 (137)
                      +++|||+-.+|||+..+..+|++|||++|..............+  ...|||||.+....|+.++||||||+++||+.+ 
T Consensus       438 ~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsL  517 (609)
T KOG0200|consen  438 PCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTL  517 (609)
T ss_pred             CccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhC
Confidence            47999999999999999999999999999654333322121112  346999999999899999999999999999966 


Q ss_pred             cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           78 VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      |..||..-....+-+..+.++  .+.+..+..++..++..|
T Consensus       518 G~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~C  558 (609)
T KOG0200|consen  518 GGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSC  558 (609)
T ss_pred             CCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            567776422222233333333  455666677888999999

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=1.4e-18  Score=128.67  Aligned_cols=84  Identities=31%  Similarity=0.380  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++|+|||+++....... .......||..|+|||++.+..++.++|+||+||+++||.+|..
T Consensus       206 ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~  285 (392)
T PHA03207        206 IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV  285 (392)
T ss_pred             ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            79999999999999999999999999876533222 11223458999999999988889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       286 pf~~~  290 (392)
T PHA03207        286 TLFGK  290 (392)
T ss_pred             CCCCC
Confidence            98653

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.73  E-value=9.9e-19  Score=124.35  Aligned_cols=83  Identities=28%  Similarity=0.364  Sum_probs=67.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++....... ......++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       124 ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~  202 (288)
T cd07871         124 ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRP  202 (288)
T ss_pred             cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999876432221 1223347889999998865 457889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       203 pf~~~  207 (288)
T cd07871         203 MFPGS  207 (288)
T ss_pred             CCCCC
Confidence            98654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.73  E-value=3.1e-18  Score=120.43  Aligned_cols=115  Identities=16%  Similarity=0.144  Sum_probs=77.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||.+...............++..|+|||.+.+..++.++|+||+|++++|++. |.
T Consensus       127 ~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~  206 (266)
T cd05064         127 GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGE  206 (266)
T ss_pred             CEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999765432111111112224568999999988889999999999999999764 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+....+.+.  ...+......+.++...|
T Consensus       207 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  244 (266)
T cd05064         207 RPYWDMSG-QDVIKAVEDGFRLPAPRNCPNLLHQLMLDC  244 (266)
T ss_pred             CCcCcCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence            89864322 1112222222  122223344566677777

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.73  E-value=3.4e-18  Score=119.46  Aligned_cols=83  Identities=28%  Similarity=0.396  Sum_probs=66.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++..............++..|++||...+..++.++|+||||++++++.+ +..
T Consensus       121 i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~  200 (256)
T cd05059         121 FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKM  200 (256)
T ss_pred             cccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCC
Confidence            7899999999999999999999999987653322211111123457999999988888999999999999999987 788


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       201 p~~~  204 (256)
T cd05059         201 PYER  204 (256)
T ss_pred             CCCC
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.73  E-value=1.9e-18  Score=127.04  Aligned_cols=84  Identities=31%  Similarity=0.456  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++..............++..|+|||.+.+. .++.++|+||+||+++||.+|..
T Consensus       124 ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  203 (372)
T cd07853         124 ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRI  203 (372)
T ss_pred             eeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCC
Confidence            79999999999999999999999999986533322222334578899999988764 46889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       204 pf~~~  208 (372)
T cd07853         204 LFQAQ  208 (372)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=6.5e-18  Score=117.99  Aligned_cols=123  Identities=23%  Similarity=0.235  Sum_probs=84.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      ++||||||+|++++.++.++++|||+++..........  ....++..|++||...+..++.++|+||||++++++.+ +
T Consensus       116 i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g  195 (257)
T cd05060         116 FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYG  195 (257)
T ss_pred             eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999886533222111  11113457999999988888999999999999999997 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||...... +....+...  ...+......+.++..+|            ++.+.|++.
T Consensus       196 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         196 AKPYGEMKGA-EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCcccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            8998643221 111111111  122222335566777778            666666654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.73  E-value=4.5e-18  Score=118.73  Aligned_cols=114  Identities=20%  Similarity=0.268  Sum_probs=78.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||+||+|++++.++.++++|||.++..............++..|+|||.+.+..++.++|+||||++++++.+ |..
T Consensus       121 i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~  200 (256)
T cd05114         121 FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKM  200 (256)
T ss_pred             ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999887653222221122234567999999988888999999999999999998 788


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||..... .+....+...  ...+......+.++..+|
T Consensus       201 p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c  237 (256)
T cd05114         201 PFEKKSN-YEVVEMISRGFRLYRPKLASMTVYEVMYSC  237 (256)
T ss_pred             CCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence            8864332 1222222222  111112234566777777

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.73  E-value=2.5e-18  Score=121.80  Aligned_cols=82  Identities=27%  Similarity=0.357  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+||+||+++.++.++++|||+++......  ......++..|+|||.+.+..++.++|+||+|+++++|.++..+
T Consensus       129 ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~  206 (288)
T cd07863         129 IVHRDLKPENILVTSGGQVKLADFGLARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  206 (288)
T ss_pred             eecCCCCHHHEEECCCCCEEECccCccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcC
Confidence            7999999999999999999999999987653221  12233578899999999888889999999999999999999888


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       207 f~~~  210 (288)
T cd07863         207 FCGN  210 (288)
T ss_pred             cCCC
Confidence            8543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.73  E-value=4.1e-18  Score=121.89  Aligned_cols=126  Identities=24%  Similarity=0.247  Sum_probs=85.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++......... .....++..|+|||.+.+..++.++|+||||++++++.+ +.
T Consensus       158 ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~  237 (304)
T cd05101         158 CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG  237 (304)
T ss_pred             eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998664322211 112235567999999988888999999999999999987 66


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      .||..... .+....+...  ..........+.++..+|            ++.+.|+.+..+
T Consensus       238 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         238 SPYPGIPV-EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             CCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            66643322 2222222211  111223344566677777            777777765544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.73  E-value=5.7e-18  Score=118.45  Aligned_cols=114  Identities=21%  Similarity=0.325  Sum_probs=78.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||+||.||+++.++.++++|||++...............++..|+|||...+..++.++|+||||++++++.+ +..
T Consensus       123 i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~  202 (260)
T cd05070         123 YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV  202 (260)
T ss_pred             cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999987653322111122234567999999888888899999999999999998 788


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||..... .+....+...  ...+......+.++..+|
T Consensus       203 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (260)
T cd05070         203 PYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMLQC  239 (260)
T ss_pred             CCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHH
Confidence            8864322 1112222211  112223334566677777

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.73  E-value=5.6e-18  Score=118.84  Aligned_cols=122  Identities=20%  Similarity=0.256  Sum_probs=84.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++........ ......++..|++||...+..++.++|+||+|++++++.+ |.
T Consensus       127 i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~  206 (266)
T cd05033         127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGE  206 (266)
T ss_pred             cccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCC
Confidence            789999999999999999999999999876421111 1112224567999999988888999999999999999886 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      .||..... ......+.+.  .+........+.++..+|            ++.++|+.
T Consensus       207 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~  264 (266)
T cd05033         207 RPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK  264 (266)
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            88854321 1122222221  112223345567788888            77777664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.73  E-value=4.7e-18  Score=120.28  Aligned_cols=83  Identities=23%  Similarity=0.331  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||||++++|+.+ +.
T Consensus       143 i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  222 (280)
T cd05092         143 FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGK  222 (280)
T ss_pred             eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999987553222111 112224678999999988888999999999999999987 88


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       223 ~p~~~  227 (280)
T cd05092         223 QPWYQ  227 (280)
T ss_pred             CCCcc
Confidence            88854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.73  E-value=3.9e-18  Score=119.25  Aligned_cols=82  Identities=27%  Similarity=0.435  Sum_probs=64.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|||+||+||+++.++.++++|||+++........   ......++..|+|||...+..++.++|+||||++++||.++
T Consensus       119 i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~  198 (262)
T cd05058         119 FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR  198 (262)
T ss_pred             ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcC
Confidence            789999999999999999999999998754321111   11122356689999999888889999999999999999885


Q ss_pred             -ccchh
Q 042492           79 -LINWA   83 (137)
Q Consensus        79 -~~~~~   83 (137)
                       ..||.
T Consensus       199 ~~~~~~  204 (262)
T cd05058         199 GAPPYP  204 (262)
T ss_pred             CCCCCC
Confidence             45554

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.73  E-value=3.7e-18  Score=116.49  Aligned_cols=92  Identities=24%  Similarity=0.400  Sum_probs=78.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |||||+||+|+|++..+..|++|||.+..-..+.   -...+||.-|.+||...+..++..+|+|++|++.+|+..|..|
T Consensus       145 VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k---R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~pp  221 (281)
T KOG0580|consen  145 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK---RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPP  221 (281)
T ss_pred             cccCCCCHHHhccCCCCCeeccCCCceeecCCCC---ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCc
Confidence            7999999999999999999999999987653222   2345699999999999999999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccC
Q 042492           82 WAYKCFIDREFNKLVH   97 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~   97 (137)
                      |.... .++.+.++..
T Consensus       222 Fes~~-~~etYkrI~k  236 (281)
T KOG0580|consen  222 FESQS-HSETYKRIRK  236 (281)
T ss_pred             hhhhh-hHHHHHHHHH
Confidence            98766 5555555543

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=3.9e-18  Score=124.77  Aligned_cols=115  Identities=33%  Similarity=0.403  Sum_probs=83.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCC----C-Cc-ccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP----I-SV-KANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~----~-~~-~~dv~s~G~~l   72 (137)
                      |.|||||+.|||+.+++.|-|+|+|++.........   ......||.+|||||++....    | +. .+||||||.++
T Consensus       337 IAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVl  416 (513)
T KOG2052|consen  337 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVL  416 (513)
T ss_pred             hhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHH
Confidence            679999999999999999999999999765443221   123456999999999885332    2 33 49999999999


Q ss_pred             HHH----------Hhcccchhhhhcch---hhhhhcc--CC-------ccccHHHHHHHHHHHHHh
Q 042492           73 LEI----------EIVLINWAYKCFID---REFNKLV--HD-------EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        73 ~el----------~~~~~~~~~~~~~~---~~~~~~~--~~-------~~~~~~~~~~~~~~~l~C  116 (137)
                      ||+          .....||..-...+   +++.+++  +.       ...+.+.+..|.+++.-|
T Consensus       417 WEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeC  482 (513)
T KOG2052|consen  417 WEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKEC  482 (513)
T ss_pred             HHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHh
Confidence            999          33456665443333   3344433  11       345689999999999999

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=5.4e-18  Score=118.50  Aligned_cols=84  Identities=32%  Similarity=0.393  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||++|+||+++.++.++++|||+++..........  ....++..|+|||.+.+..++.++|+||+|+++|++.+|.
T Consensus       125 i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  204 (263)
T cd06625         125 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK  204 (263)
T ss_pred             eecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCC
Confidence            78999999999999999999999999876533221111  2234778899999998888889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       205 ~p~~~~  210 (263)
T cd06625         205 PPWAEF  210 (263)
T ss_pred             CCcccc
Confidence            998654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.73  E-value=7.1e-18  Score=117.74  Aligned_cols=80  Identities=30%  Similarity=0.422  Sum_probs=66.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++......    ....++..|++||+..+..++.++|+||+|+++++|.+ |..
T Consensus       123 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~  198 (256)
T cd05082         123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  198 (256)
T ss_pred             EeccccchheEEEcCCCcEEecCCccceeccccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999987643222    12224567999999988888999999999999999986 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       199 p~~~~  203 (256)
T cd05082         199 PYPRI  203 (256)
T ss_pred             CCCCC
Confidence            87643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.73  E-value=5.8e-18  Score=134.95  Aligned_cols=84  Identities=31%  Similarity=0.482  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-----------------ceeeecccccceecccccCCCCCCcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-----------------RTFTLIRGTRGYMAPEWSKNTPISVKAN   64 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----------------~~~~~~~~~~~~~ape~~~~~~~~~~~d   64 (137)
                      |+||||||+||+++.++.++++|||+++.......                 .......||+.|+|||.+.+..++.++|
T Consensus       134 IIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSD  213 (932)
T PRK13184        134 VLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTD  213 (932)
T ss_pred             ccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhH
Confidence            79999999999999999999999999986521100                 0011235899999999998888899999


Q ss_pred             eeeHHHHHHHHHhcccchhhh
Q 042492           65 VFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        65 v~s~G~~l~el~~~~~~~~~~   85 (137)
                      +||+||+++||.+|..||...
T Consensus       214 IWSLGVILyELLTG~~PF~~~  234 (932)
T PRK13184        214 IYALGVILYQMLTLSFPYRRK  234 (932)
T ss_pred             HHHHHHHHHHHHHCCCCCCCc
Confidence            999999999999999999653

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.73  E-value=5.6e-18  Score=119.87  Aligned_cols=81  Identities=36%  Similarity=0.515  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||++.......  ......|+..|+|||++.+..++.++|+||+|++++++.+|..|
T Consensus       116 ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p  193 (277)
T cd05607         116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTP  193 (277)
T ss_pred             EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999987653322  22234588899999999888899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       194 ~~~  196 (277)
T cd05607         194 FKD  196 (277)
T ss_pred             CCC
Confidence            864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=7.8e-18  Score=119.57  Aligned_cols=82  Identities=33%  Similarity=0.481  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++.......  .....|+..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       123 ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~p  200 (285)
T cd05605         123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSP  200 (285)
T ss_pred             cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCC
Confidence            79999999999999999999999999886532221  1233588899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 f~~~  204 (285)
T cd05605         201 FRQR  204 (285)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.73  E-value=6e-18  Score=119.74  Aligned_cols=83  Identities=29%  Similarity=0.366  Sum_probs=67.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++....... .......++..|++||.+.+..++.++|+||||++++||.+ +.
T Consensus       145 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~  224 (283)
T cd05090         145 FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGL  224 (283)
T ss_pred             eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence            79999999999999999999999999876533221 11122335667999999988888999999999999999997 88


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       225 ~p~~~  229 (283)
T cd05090         225 QPYYG  229 (283)
T ss_pred             CCCCC
Confidence            88854

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=5.4e-18  Score=123.22  Aligned_cols=79  Identities=30%  Similarity=0.392  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++.....    .....++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  214 (343)
T cd07878         139 IIHRDLKPSNVAVNEDCELRILDFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA  214 (343)
T ss_pred             eecccCChhhEEECCCCCEEEcCCccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCC
Confidence            799999999999999999999999999865322    123458889999998866 457889999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       215 pf~~  218 (343)
T cd07878         215 LFPG  218 (343)
T ss_pred             CCCC
Confidence            9864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2.1e-18  Score=131.21  Aligned_cols=113  Identities=23%  Similarity=0.344  Sum_probs=86.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV-LI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~-~~   80 (137)
                      .|||||..+|+|+..+..+|++|||++|++...+........-...|+|||.+..+.|+.|+|||+||+++||+.++ ..
T Consensus       386 FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMs  465 (1157)
T KOG4278|consen  386 FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS  465 (1157)
T ss_pred             hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999998866554333333345689999999999999999999999999999764 46


Q ss_pred             chhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                      ||..-..  .....++..   .+.+..++.++.++++.|
T Consensus       466 PYPGidl--SqVY~LLEkgyRM~~PeGCPpkVYeLMraC  502 (1157)
T KOG4278|consen  466 PYPGIDL--SQVYGLLEKGYRMDGPEGCPPKVYELMRAC  502 (1157)
T ss_pred             CCCCccH--HHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence            6643222  222333322   456667788889999999

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.72  E-value=9.2e-18  Score=117.53  Aligned_cols=84  Identities=27%  Similarity=0.352  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      ++||||||+||+++.++.++++|||+++..........  ....++..|++||.+....++.++|+||||++++++.+ |
T Consensus       116 i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g  195 (257)
T cd05115         116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYG  195 (257)
T ss_pred             eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCC
Confidence            79999999999999999999999999875533222111  11123467999999887788899999999999999985 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       196 ~~p~~~~  202 (257)
T cd05115         196 QKPYKKM  202 (257)
T ss_pred             CCCcCcC
Confidence            8888643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.72  E-value=5.5e-18  Score=119.35  Aligned_cols=114  Identities=20%  Similarity=0.312  Sum_probs=79.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++........ ......++..|++||.+.+..++.++|+||||++++|+.+ +.
T Consensus       140 i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  219 (277)
T cd05032         140 FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAE  219 (277)
T ss_pred             ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCC
Confidence            789999999999999999999999998755332211 1122335678999999988888999999999999999987 78


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... ++....+...  ...+.....++.++..+|
T Consensus       220 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  257 (277)
T cd05032         220 QPYQGLSN-EEVLKFVIDGGHLDLPENCPDKLLELMRMC  257 (277)
T ss_pred             CCCccCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            88754322 2222222222  112222345566677777

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.72  E-value=7e-18  Score=127.57  Aligned_cols=111  Identities=20%  Similarity=0.199  Sum_probs=84.8

Q ss_pred             eEecCCCCCCEEe-CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILM-DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||.|||+ +..++++++|||.++.....    ....+-|..|.|||++....++.++|+||+|+++|+|++|..
T Consensus       436 vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~t  511 (612)
T KOG0603|consen  436 VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRT  511 (612)
T ss_pred             eeecCCChhheeecCCCCcEEEEEechhhhCchh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCC
Confidence            7999999999999 58899999999998876433    122234667999999998889999999999999999999999


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||.......+.+..+..+  .+...+.++.++.-.|+-
T Consensus       512 p~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  512 LFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             ccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccC
Confidence            998665442333333333  355667777777655544

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.72  E-value=7.5e-18  Score=118.59  Aligned_cols=112  Identities=27%  Similarity=0.301  Sum_probs=76.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++......  .......+..|++||+..+..++.++|+||||++++||.+ +..
T Consensus       133 i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~  210 (270)
T cd05047         133 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  210 (270)
T ss_pred             EeecccccceEEEcCCCeEEECCCCCccccchhh--hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999886321111  1111123557999999988888999999999999999986 889


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||..... .+....+...  .+........+.++..+|
T Consensus       211 pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  247 (270)
T cd05047         211 PYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQC  247 (270)
T ss_pred             CccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHH
Confidence            9864322 1112222111  111122234566777788

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.72  E-value=7e-18  Score=117.99  Aligned_cols=84  Identities=25%  Similarity=0.381  Sum_probs=67.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|+|+||.||+++.++.+|++|||.++..............++..|++||...+..++.++|+||||+++++|.+ +.
T Consensus       120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~  199 (256)
T cd05113         120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGK  199 (256)
T ss_pred             CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999987653322211112234567999999988788899999999999999987 88


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       200 ~p~~~  204 (256)
T cd05113         200 MPYER  204 (256)
T ss_pred             CCcCc
Confidence            88864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.72  E-value=1.5e-17  Score=116.46  Aligned_cols=84  Identities=27%  Similarity=0.420  Sum_probs=67.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+|++++.++.++++|||.++..............++..|++||.+....++.++|+||+|++++++.+ |.
T Consensus       122 ~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~  201 (260)
T cd05073         122 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR  201 (260)
T ss_pred             CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCC
Confidence            37899999999999999999999999987653322221122235567999999988888899999999999999998 88


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       202 ~p~~~  206 (260)
T cd05073         202 IPYPG  206 (260)
T ss_pred             CCCCC
Confidence            88864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.72  E-value=8e-18  Score=119.51  Aligned_cols=82  Identities=29%  Similarity=0.453  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+||+||+++.++.++++|||++........  .....|+..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       123 iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P  200 (285)
T cd05632         123 TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP  200 (285)
T ss_pred             eeecCCCHHHEEECCCCCEEEecCCcceecCCCCc--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999876532211  2234588999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 ~~~~  204 (285)
T cd05632         201 FRGR  204 (285)
T ss_pred             CCCC
Confidence            9653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.72  E-value=1.7e-17  Score=116.09  Aligned_cols=83  Identities=27%  Similarity=0.466  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||++|+||+++.++.++++|||+++........ .....++..|.+||.+.+..++.++|+||+|++++++.++..|
T Consensus       127 i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p  205 (267)
T cd08224         127 IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             EecCCcChhhEEECCCCcEEEeccceeeeccCCCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCC
Confidence            789999999999999999999999998765332221 2223478889999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       206 ~~~~  209 (267)
T cd08224         206 FYGD  209 (267)
T ss_pred             cccC
Confidence            8543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.72  E-value=1e-17  Score=117.45  Aligned_cols=83  Identities=25%  Similarity=0.467  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+||+||+++.++.++++|||++........ ......++..|++||...+..++.++|+||+|+++++|.++..|
T Consensus       127 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p  205 (267)
T cd08229         127 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             eecCCCCHHHEEEcCCCCEEECcchhhhccccCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999998876533222 11233478899999999888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       206 ~~~~  209 (267)
T cd08229         206 FYGD  209 (267)
T ss_pred             cccc
Confidence            8643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.72  E-value=3.5e-18  Score=122.65  Aligned_cols=83  Identities=25%  Similarity=0.345  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEe----CCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCC-CCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill----~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||++    +.++.+||+|||+++........  ......++..|+|||.+.+. .++.++|+||+|++++|
T Consensus       129 ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  208 (317)
T cd07867         129 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (317)
T ss_pred             EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHH
Confidence            7999999999999    45678999999999865332221  11234578899999988664 47889999999999999


Q ss_pred             HHhcccchhh
Q 042492           75 IEIVLINWAY   84 (137)
Q Consensus        75 l~~~~~~~~~   84 (137)
                      |.+|..||..
T Consensus       209 l~tg~~~f~~  218 (317)
T cd07867         209 LLTSEPIFHC  218 (317)
T ss_pred             HHhCCCCccc
Confidence            9999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.72  E-value=8.5e-18  Score=119.46  Aligned_cols=83  Identities=35%  Similarity=0.464  Sum_probs=70.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++++|||++........  .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       122 ~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~  199 (285)
T cd05630         122 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS  199 (285)
T ss_pred             CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCC
Confidence            379999999999999999999999999876532221  123358899999999988889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 Pf~~~  204 (285)
T cd05630         200 PFQQR  204 (285)
T ss_pred             CCCCC
Confidence            99753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.72  E-value=1.4e-17  Score=116.49  Aligned_cols=84  Identities=30%  Similarity=0.439  Sum_probs=68.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+|++++.++.++++|||+++..............++..|++||.+.+..++.++|+||||++++++.+ |..
T Consensus       123 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~  202 (260)
T cd05067         123 YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRI  202 (260)
T ss_pred             eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987654222211122235668999999988888899999999999999998 899


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       203 p~~~~  207 (260)
T cd05067         203 PYPGM  207 (260)
T ss_pred             CCCCC
Confidence            99643

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.72  E-value=1.2e-17  Score=117.28  Aligned_cols=122  Identities=21%  Similarity=0.315  Sum_probs=84.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceee--ecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT--LIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      ++|||+||+||+++.++.++++|||+++...........  ....+..|++||.+.+..++.++|+||+|++++|+.+ |
T Consensus       128 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g  207 (268)
T cd05063         128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFG  207 (268)
T ss_pred             eeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCC
Confidence            789999999999999999999999998765332221111  1112446999999988888999999999999999886 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ..||..... .+....+...  .....+....+.++..+|            ++.+.|++
T Consensus       208 ~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~  266 (268)
T cd05063         208 ERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK  266 (268)
T ss_pred             CCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence            888854321 1222222221  122223445677888888            77777664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.72  E-value=9e-18  Score=120.28  Aligned_cols=84  Identities=31%  Similarity=0.366  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|+|+||+||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||+|++++++.+ |.
T Consensus       162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~  241 (302)
T cd05055         162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS  241 (302)
T ss_pred             eehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999988653322211 112235678999999988888999999999999999987 88


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       242 ~p~~~~  247 (302)
T cd05055         242 NPYPGM  247 (302)
T ss_pred             CCcCCC
Confidence            887643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.71  E-value=5e-18  Score=128.15  Aligned_cols=81  Identities=27%  Similarity=0.342  Sum_probs=66.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++|+|||+++........ ......||..|++||++.+..++.++|+|||||++|||.++..
T Consensus       281 IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~  360 (461)
T PHA03211        281 IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA  360 (461)
T ss_pred             EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999999999865332211 1223458999999999988889999999999999999987664


Q ss_pred             ch
Q 042492           81 NW   82 (137)
Q Consensus        81 ~~   82 (137)
                      ++
T Consensus       361 ~l  362 (461)
T PHA03211        361 SL  362 (461)
T ss_pred             Cc
Confidence            43

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.71  E-value=7.9e-18  Score=122.77  Aligned_cols=83  Identities=28%  Similarity=0.463  Sum_probs=72.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCC-cccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS-VKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+|-+|||+|.++.+||+|||++..+..  ....++++|++-|.+||+..+.+|. +.+|.||+|+++|.|..|..
T Consensus       174 VvHRDLKLENILLD~N~NiKIADFGLSNly~~--~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtM  251 (668)
T KOG0611|consen  174 VVHRDLKLENILLDQNNNIKIADFGLSNLYAD--KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTM  251 (668)
T ss_pred             ceecccchhheeecCCCCeeeeccchhhhhcc--ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhccc
Confidence            68999999999999999999999999987632  3334567899999999999999985 56999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       252 PFDG~D  257 (668)
T KOG0611|consen  252 PFDGRD  257 (668)
T ss_pred             ccCCch
Confidence            998654

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.71  E-value=1.2e-17  Score=121.57  Aligned_cols=85  Identities=31%  Similarity=0.361  Sum_probs=67.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||.||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||||++++++.+ |
T Consensus       199 ~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g  278 (343)
T cd05103         199 KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  278 (343)
T ss_pred             CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCC
Confidence            37999999999999999999999999987643221111 111224567999999888888999999999999999985 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       279 ~~p~~~~  285 (343)
T cd05103         279 ASPYPGV  285 (343)
T ss_pred             CCCCCCc
Confidence            8888654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.71  E-value=1.5e-17  Score=116.84  Aligned_cols=85  Identities=24%  Similarity=0.312  Sum_probs=67.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++..............++..|++||.+....++.++|+||+|++++|+.+ |..
T Consensus       128 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  207 (270)
T cd05056         128 FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVK  207 (270)
T ss_pred             eeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999988654332211222224467999999887888999999999999999875 888


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       208 pf~~~~  213 (270)
T cd05056         208 PFQGVK  213 (270)
T ss_pred             CCCCCC
Confidence            986543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.71  E-value=6.2e-18  Score=120.13  Aligned_cols=122  Identities=25%  Similarity=0.302  Sum_probs=83.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++........ ......++..|++||...+..++.++|+||||+++++|.+ |.
T Consensus       148 ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~  227 (290)
T cd05045         148 LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG  227 (290)
T ss_pred             eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999998765322211 1112234568999999888888999999999999999997 88


Q ss_pred             cchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||.....  +.+...+..   ..........+.++...|            ++.++|+.+
T Consensus       228 ~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~  286 (290)
T cd05045         228 NPYPGIAP--ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM  286 (290)
T ss_pred             CCCCCCCH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence            88864322  111112111   111122234566677777            777777654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.71  E-value=1.3e-17  Score=116.52  Aligned_cols=121  Identities=24%  Similarity=0.371  Sum_probs=84.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||+|++||+++.++.++++|||.+.......... ....++..|++||......++.++|+||+|++++++.+ +..
T Consensus       125 i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~  203 (261)
T cd05148         125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS-SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQV  203 (261)
T ss_pred             eeccccCcceEEEcCCceEEEccccchhhcCCccccc-cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999987653222111 12234567999999988888899999999999999987 788


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ||..... .+.+..+...  ..........+.++..+|            ++.+.|+.
T Consensus       204 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         204 PYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCCcCCH-HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            8864332 2222222222  122233345566777777            66666654

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.71  E-value=1.1e-17  Score=118.17  Aligned_cols=86  Identities=33%  Similarity=0.378  Sum_probs=73.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||++..+...|+.|||+++.-..  .-..+.+..+..|.|||++.+..+...+||||.||++.||..+..-
T Consensus       139 IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~--~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vl  216 (369)
T KOG0665|consen  139 IIHRDLKPSNIVVNSDCTLKILDFGLARTEDT--DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVL  216 (369)
T ss_pred             eeecccCcccceecchhheeeccchhhcccCc--ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEE
Confidence            79999999999999999999999999986422  2234566788899999999988899999999999999999999988


Q ss_pred             hhhhhcch
Q 042492           82 WAYKCFID   89 (137)
Q Consensus        82 ~~~~~~~~   89 (137)
                      |......+
T Consensus       217 f~g~d~id  224 (369)
T KOG0665|consen  217 FPGKDHID  224 (369)
T ss_pred             ecCchHHH
Confidence            87554443

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.71  E-value=9.1e-18  Score=118.70  Aligned_cols=83  Identities=27%  Similarity=0.314  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCceecCCCCcce--eeecccccceecccccCCC-CCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~e   74 (137)
                      |+|||+||.||++..+    |.+||+|+|++|.+.++-...  .....-|.+|.|||.+.+. .|+.+.|+|+.||+..|
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE  232 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE  232 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence            6899999999999876    899999999999875443322  2334568899999988765 47899999999999999


Q ss_pred             HHhcccchhh
Q 042492           75 IEIVLINWAY   84 (137)
Q Consensus        75 l~~~~~~~~~   84 (137)
                      |++...-|..
T Consensus       233 lLtl~PlF~g  242 (438)
T KOG0666|consen  233 LLTLEPLFKG  242 (438)
T ss_pred             HHccCccccc
Confidence            9877766643

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.71  E-value=5.5e-18  Score=128.96  Aligned_cols=85  Identities=31%  Similarity=0.416  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecC---------CCCc------------------------------c--eee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLM---------PDQT------------------------------R--TFT   40 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~---------~~~~------------------------------~--~~~   40 (137)
                      .|||||||+|||+|.+|++||.|||+|..+.         ++.+                              .  ..-
T Consensus       750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ah  829 (1034)
T KOG0608|consen  750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAH  829 (1034)
T ss_pred             ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhh
Confidence            5899999999999999999999999997552         0000                              0  001


Q ss_pred             ecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           41 LIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        41 ~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      ...||.-|+|||++....++..+|.||.||+|+||+.|..||....
T Consensus       830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence            2458999999999988889999999999999999999999997543

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.71  E-value=1.9e-17  Score=115.22  Aligned_cols=84  Identities=25%  Similarity=0.292  Sum_probs=65.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||.||+++.++.++++|||+++.......... .....+..|++||.+.+..++.++|+||+|++++|+.+ +
T Consensus       114 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~  193 (252)
T cd05084         114 HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLG  193 (252)
T ss_pred             CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCC
Confidence            378999999999999999999999999875432211110 11112346999999988888999999999999999986 7


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       194 ~~p~~~  199 (252)
T cd05084         194 AVPYAN  199 (252)
T ss_pred             CCCccc
Confidence            788753

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.71  E-value=1.5e-17  Score=123.76  Aligned_cols=85  Identities=28%  Similarity=0.304  Sum_probs=67.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+|++||+++.++.++++|||+++....... .......++..|++||.+.+..++.++|+||||++++|+.+ +
T Consensus       259 ~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g  338 (401)
T cd05107         259 NCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLG  338 (401)
T ss_pred             CcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcC
Confidence            378999999999999999999999999886532211 11112236778999999988888999999999999999987 7


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       339 ~~P~~~~  345 (401)
T cd05107         339 GTPYPEL  345 (401)
T ss_pred             CCCCCCC
Confidence            7888643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.71  E-value=2.1e-17  Score=114.97  Aligned_cols=85  Identities=34%  Similarity=0.491  Sum_probs=70.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|||+|++||+++.++.++++|||+++........ .....++..|++||+..+..++.++|+||||+++++|.+|..
T Consensus       121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  199 (256)
T cd08529         121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH  199 (256)
T ss_pred             CcccCCCCcceEEEeCCCCEEEcccccceeccCccch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCC
Confidence            3789999999999999999999999998866433221 223357889999999988888999999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       200 p~~~~~  205 (256)
T cd08529         200 PFDANN  205 (256)
T ss_pred             CCCCCC
Confidence            996443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.71  E-value=2.1e-17  Score=117.46  Aligned_cols=83  Identities=25%  Similarity=0.305  Sum_probs=65.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh--c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI--V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~--~   78 (137)
                      |+|||+||+||+++.++.++++|||+++........ ......++..|++||.+.+..++.++|+||||++++|+.+  +
T Consensus       151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~  230 (296)
T cd05051         151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR  230 (296)
T ss_pred             ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence            789999999999999999999999998765332211 1122335678999999888788999999999999999976  5


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       231 ~~p~~~  236 (296)
T cd05051         231 EQPYEH  236 (296)
T ss_pred             CCCCCC
Confidence            566653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.71  E-value=1e-17  Score=119.88  Aligned_cols=84  Identities=26%  Similarity=0.348  Sum_probs=67.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.+|++|||+++........ ......++..|++||.+.+..++.++|+||||++++|+.+ +
T Consensus       129 ~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g  208 (303)
T cd05110         129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG  208 (303)
T ss_pred             CeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999999999865322211 1112234668999999988888999999999999999986 7


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       209 ~~p~~~  214 (303)
T cd05110         209 GKPYDG  214 (303)
T ss_pred             CCCCCC
Confidence            788854

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.71  E-value=1.7e-17  Score=119.27  Aligned_cols=115  Identities=22%  Similarity=0.227  Sum_probs=77.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||||++++++.+ +
T Consensus       154 gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g  233 (314)
T cd05099         154 RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLG  233 (314)
T ss_pred             CeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCC
Confidence            37999999999999999999999999997653221111 111123457999999988888999999999999999987 7


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ..||..... .+.+..+...  .........++.++..+|
T Consensus       234 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  272 (314)
T cd05099         234 GSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMREC  272 (314)
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            788754322 1112222221  112222334556677788

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.70  E-value=1.3e-17  Score=117.75  Aligned_cols=123  Identities=23%  Similarity=0.215  Sum_probs=85.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+|++++.++.+|++|||+++.+....... .....++..|++||.+.+..++.++|+||+|++++|+.+ |.
T Consensus       138 i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~  217 (280)
T cd05043         138 VIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQ  217 (280)
T ss_pred             EeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCC
Confidence            7999999999999999999999999998653332211 122235667999999988888999999999999999988 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||..... .+....+.+.  ..........+.++..+|            ++.++|+..
T Consensus       218 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~  276 (280)
T cd05043         218 TPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF  276 (280)
T ss_pred             CCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            88864321 1111111111  111122234567777788            777776653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.70  E-value=2e-17  Score=116.18  Aligned_cols=82  Identities=35%  Similarity=0.561  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+++.||+++.++.++++|||.+.......  ......++..|++||.+.+..++.++|+||||+++|++.++..|
T Consensus       135 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p  212 (269)
T cd08528         135 IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP  212 (269)
T ss_pred             eeecCCCHHHEEECCCCcEEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence            7899999999999999999999999988653322  22334578899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       213 ~~~~  216 (269)
T cd08528         213 FYST  216 (269)
T ss_pred             cccc
Confidence            8644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.70  E-value=1.3e-17  Score=119.46  Aligned_cols=82  Identities=32%  Similarity=0.358  Sum_probs=64.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++.......  .....++..|++||...+..++.++|+||||++++++.+ |..
T Consensus       145 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  222 (303)
T cd05088         145 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  222 (303)
T ss_pred             ccccccchheEEecCCCcEEeCccccCcccchhhh--cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCC
Confidence            78999999999999999999999999864211111  111123567999999888778899999999999999997 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       223 p~~~~  227 (303)
T cd05088         223 PYCGM  227 (303)
T ss_pred             CcccC
Confidence            98643

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.70  E-value=1.5e-17  Score=116.91  Aligned_cols=115  Identities=21%  Similarity=0.275  Sum_probs=78.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++........ ......++..|++||...+..++.++|+||+|++++++.+ +
T Consensus       133 ~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g  212 (273)
T cd05074         133 NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRG  212 (273)
T ss_pred             CEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCC
Confidence            3799999999999999999999999998865322211 1112234567899999888888899999999999999987 7


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ..||..... ......+...  ..........+.++..+|
T Consensus       213 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  251 (273)
T cd05074         213 QTPYAGVEN-SEIYNYLIKGNRLKQPPDCLEDVYELMCQC  251 (273)
T ss_pred             CCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            777753321 1222222222  111223345677788888

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.70  E-value=1.1e-17  Score=119.42  Aligned_cols=85  Identities=27%  Similarity=0.423  Sum_probs=69.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++++|||+++....... ......++..|++||.+.+..++.++|+||||++++++.+|..
T Consensus       136 gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~  214 (296)
T cd06654         136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP  214 (296)
T ss_pred             CcccCCCCHHHEEEcCCCCEEECccccchhcccccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCC
Confidence            378999999999999999999999998875432221 1122347889999999988888899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       215 pf~~~~  220 (296)
T cd06654         215 PYLNEN  220 (296)
T ss_pred             CCCCCC
Confidence            996543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.70  E-value=2.6e-17  Score=114.69  Aligned_cols=83  Identities=28%  Similarity=0.478  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||+||+||+++.++.++++|||++........ ......++..|+|||...+..++.++|+||+|++++++.++..|
T Consensus       123 i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~  201 (257)
T cd08223         123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHA  201 (257)
T ss_pred             eeccCCCchhEEEecCCcEEEecccceEEecccCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            69999999999999999999999999886633222 22234578899999999888888999999999999999999988


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       202 ~~~~  205 (257)
T cd08223         202 FNAK  205 (257)
T ss_pred             CCCC
Confidence            8643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.70  E-value=1.3e-17  Score=118.19  Aligned_cols=82  Identities=34%  Similarity=0.514  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC---CCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT---PISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|||+||+||+++.++.++++|||+++.......  .....++..|++||.+...   .++.++|+||+|++++++.+|
T Consensus       129 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g  206 (288)
T cd06616         129 IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATG  206 (288)
T ss_pred             eeccCCCHHHEEEccCCcEEEeecchhHHhccCCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhC
Confidence            78999999999999999999999999875532221  1223478889999998765   578899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       207 ~~p~~~~  213 (288)
T cd06616         207 KFPYPKW  213 (288)
T ss_pred             CCCchhc
Confidence            9999654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.70  E-value=2.5e-17  Score=119.40  Aligned_cols=124  Identities=24%  Similarity=0.248  Sum_probs=84.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+|||+||+||+++.++.++++|||+++........ ......++..|++||.+.+..++.++|+||||++++||.+ +.
T Consensus       155 ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  234 (334)
T cd05100         155 CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG  234 (334)
T ss_pred             eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCC
Confidence            799999999999999999999999998765332211 1112224567999999988888999999999999999987 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      .||..... ++....+...  .........++.++..+|            ++.+.|+...
T Consensus       235 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         235 SPYPGIPV-EELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            78754332 2222222222  112222334566777777            6666666543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.70  E-value=3e-17  Score=114.15  Aligned_cols=85  Identities=32%  Similarity=0.380  Sum_probs=69.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .++|||+||+||+++.++.++++|||.++....... .......++..|++||......++.++|+||+|++++++.+ |
T Consensus       125 ~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  204 (262)
T cd00192         125 KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLG  204 (262)
T ss_pred             CcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcC
Confidence            378999999999999999999999999987643221 11223346778999999988788999999999999999988 5


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       205 ~~p~~~~  211 (262)
T cd00192         205 ATPYPGL  211 (262)
T ss_pred             CCCCCCC
Confidence            8888654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.70  E-value=9.7e-18  Score=121.73  Aligned_cols=81  Identities=33%  Similarity=0.526  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||++.......   .....|+..|+|||.+.+..++.++|+||+||+++++.+|..|
T Consensus       125 ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  201 (333)
T cd06650         125 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            7999999999999999999999999987543221   1233588899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       202 ~~~~  205 (333)
T cd06650         202 IPPP  205 (333)
T ss_pred             CCCc
Confidence            8643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.70  E-value=1.3e-17  Score=122.18  Aligned_cols=79  Identities=29%  Similarity=0.395  Sum_probs=65.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++.....  .......|+..|+|||.+.+..++.++|+||+||++|||+++..+
T Consensus       178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~  255 (357)
T PHA03209        178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST  255 (357)
T ss_pred             eecCCCCHHHEEECCCCCEEEecCccccccccC--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence            799999999999999999999999998743211  112234589999999999888899999999999999999875444


Q ss_pred             h
Q 042492           82 W   82 (137)
Q Consensus        82 ~   82 (137)
                      +
T Consensus       256 ~  256 (357)
T PHA03209        256 I  256 (357)
T ss_pred             c
Confidence            3

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.70  E-value=1.5e-17  Score=116.89  Aligned_cols=83  Identities=27%  Similarity=0.354  Sum_probs=67.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el   75 (137)
                      .|+|||+|++||+++.++.++++|||+++....... ......|+..|++||++.     ...++.++|+||+|+++|||
T Consensus       131 ~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el  209 (272)
T cd06637         131 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM  209 (272)
T ss_pred             CCccCCCCHHHEEECCCCCEEEccCCCceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence            379999999999999999999999999876532221 223345888999999875     23467889999999999999


Q ss_pred             Hhcccchhh
Q 042492           76 EIVLINWAY   84 (137)
Q Consensus        76 ~~~~~~~~~   84 (137)
                      .+|..||..
T Consensus       210 ~~g~~p~~~  218 (272)
T cd06637         210 AEGAPPLCD  218 (272)
T ss_pred             HhCCCCccc
Confidence            999999854

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.70  E-value=4.4e-17  Score=113.27  Aligned_cols=84  Identities=25%  Similarity=0.251  Sum_probs=65.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++.......... .....+..|++||.+.+..++.++|+||+|++++++.+ +.
T Consensus       114 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~  193 (251)
T cd05041         114 CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGD  193 (251)
T ss_pred             EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccC
Confidence            78999999999999999999999999876532221111 11123456999999988888999999999999999997 77


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       194 ~p~~~~  199 (251)
T cd05041         194 TPYPGM  199 (251)
T ss_pred             CCCccC
Confidence            787543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.69  E-value=2.9e-17  Score=114.53  Aligned_cols=83  Identities=29%  Similarity=0.394  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      ++|||+||+||+++.++.+|++|||+++........  ......++..|++||.+.+..++.++|+||+|+++++|.+ |
T Consensus       118 i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g  197 (257)
T cd05040         118 FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYG  197 (257)
T ss_pred             ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCC
Confidence            689999999999999999999999998866332211  1112336678999999988888999999999999999997 8


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       198 ~~p~~~  203 (257)
T cd05040         198 EEPWAG  203 (257)
T ss_pred             CCCCCC
Confidence            899853

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.69  E-value=2.1e-17  Score=115.14  Aligned_cols=84  Identities=26%  Similarity=0.402  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++..............++..|++||.+.+..++.++|+||+|++++|+.+ +..
T Consensus       121 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~  200 (256)
T cd05112         121 VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT  200 (256)
T ss_pred             ccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999987653322211112224567999999988888889999999999999987 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       201 p~~~~  205 (256)
T cd05112         201 PYENR  205 (256)
T ss_pred             CCCcC
Confidence            88643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.69  E-value=1.5e-17  Score=133.42  Aligned_cols=82  Identities=27%  Similarity=0.384  Sum_probs=65.3

Q ss_pred             eEecCCCCCCEEeCC-----------------CCcEEEEecCCceecCCCCcceeeecccccceecccccCC--CCCCcc
Q 042492            2 IIHCDIKPHNILMDE-----------------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--TPISVK   62 (137)
Q Consensus         2 iiHrdlk~~nill~~-----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~   62 (137)
                      |+||||||+||+++.                 ...+||+|||+++......  ......|++.|+|||++.+  ..++.+
T Consensus       146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~K  223 (1021)
T PTZ00266        146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDK  223 (1021)
T ss_pred             ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCch
Confidence            899999999999954                 2348999999997653221  1223458999999998854  347889


Q ss_pred             cceeeHHHHHHHHHhcccchhhh
Q 042492           63 ANVFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        63 ~dv~s~G~~l~el~~~~~~~~~~   85 (137)
                      +|||||||++|+|++|..||...
T Consensus       224 SDVWSLG~ILYELLTGk~PF~~~  246 (1021)
T PTZ00266        224 SDMWALGCIIYELCSGKTPFHKA  246 (1021)
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcC
Confidence            99999999999999999999644

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.69  E-value=1e-16  Score=130.06  Aligned_cols=121  Identities=21%  Similarity=0.370  Sum_probs=88.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +|+|||+||+||+++.++..++. ++........     ....++..|+|||++.+..++.++||||||+++|||.+|..
T Consensus       803 ~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~  876 (968)
T PLN00113        803 AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKS  876 (968)
T ss_pred             CeecCCCCHHhEEECCCCceEEE-eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCC
Confidence            48999999999999988888776 6654432111     12247889999999998889999999999999999999999


Q ss_pred             chhhhhcc-------------hhhhhhccCC-----ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           81 NWAYKCFI-------------DREFNKLVHD-----EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        81 ~~~~~~~~-------------~~~~~~~~~~-----~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ||......             +.....++++     .....+++.++.+++.+|            +|+++|+...+
T Consensus       877 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        877 PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            97432111             1112223333     133456778899999999            88888887643

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.69  E-value=2.4e-17  Score=116.41  Aligned_cols=113  Identities=24%  Similarity=0.262  Sum_probs=75.8

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ++|||+||+||+++.++   .++++|||+++......... ......+..|++||.+.+..++.++|+||||++++||.+
T Consensus       137 ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  216 (277)
T cd05036         137 FIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS  216 (277)
T ss_pred             EeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence            79999999999998644   58999999988652221111 111123457999999988889999999999999999986


Q ss_pred             -cccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           78 -VLINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        78 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                       +..||.....  +.....+..   ...+......+.++..+|
T Consensus       217 ~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~c  257 (277)
T cd05036         217 LGYMPYPGRTN--QEVMEFVTGGGRLDPPKGCPGPVYRIMTDC  257 (277)
T ss_pred             CCCCCCCCCCH--HHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence             8888864332  122222221   122222334566677777

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.69  E-value=2.7e-17  Score=116.85  Aligned_cols=115  Identities=19%  Similarity=0.265  Sum_probs=78.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++......... .....++..|++||.+.+..++.++|+||||++++|+.+ +
T Consensus       139 ~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~  218 (288)
T cd05061         139 KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLA  218 (288)
T ss_pred             CCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999987543221111 111234567999999988888999999999999999987 6


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ..||..... ++....+.+.  ..........+.++..+|
T Consensus       219 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  257 (288)
T cd05061         219 EQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMC  257 (288)
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            778854322 2222222222  111222235567777777

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.69  E-value=1e-17  Score=120.15  Aligned_cols=83  Identities=24%  Similarity=0.357  Sum_probs=67.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... ......++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       125 ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~  203 (309)
T cd07872         125 VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRP  203 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccccceecCCCcc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999876432221 1222347889999998764 457889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       204 pf~~~  208 (309)
T cd07872         204 LFPGS  208 (309)
T ss_pred             CCCCC
Confidence            99654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.69  E-value=4.1e-17  Score=114.61  Aligned_cols=84  Identities=26%  Similarity=0.397  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeee--cccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL--IRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~--~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      ++|||+||+|++++.++.++++|||+++............  ..++..|++||.+.+..++.++|+||||++++++.. |
T Consensus       127 i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g  206 (267)
T cd05066         127 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG  206 (267)
T ss_pred             EeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCC
Confidence            7899999999999999999999999988664332211111  112457999999988888999999999999999875 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       207 ~~p~~~~  213 (267)
T cd05066         207 ERPYWEM  213 (267)
T ss_pred             CCCcccC
Confidence            8888643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=2.7e-17  Score=114.91  Aligned_cols=83  Identities=30%  Similarity=0.454  Sum_probs=66.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|+|+||+||+++.++.++++|||+++..............++..|++||.+.+..++.++|+||+|++++++.+ |..
T Consensus       124 i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~  203 (261)
T cd05034         124 YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRV  203 (261)
T ss_pred             cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987654322111112224567999999988888999999999999999997 888


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       204 p~~~  207 (261)
T cd05034         204 PYPG  207 (261)
T ss_pred             CCCC
Confidence            8854

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.69  E-value=3.2e-17  Score=130.79  Aligned_cols=83  Identities=18%  Similarity=0.221  Sum_probs=60.7

Q ss_pred             eEecCCCCCCEEeCC-------------------CCcEEEEecCCceecCCCCc---------------ceeeecccccc
Q 042492            2 IIHCDIKPHNILMDE-------------------FWTAKISDFGLAKLLMPDQT---------------RTFTLIRGTRG   47 (137)
Q Consensus         2 iiHrdlk~~nill~~-------------------~~~~kl~dfg~~~~~~~~~~---------------~~~~~~~~~~~   47 (137)
                      |+||||||+|||++.                   ++.+|++|||+++.......               .......||+.
T Consensus       101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (793)
T PLN00181        101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW  180 (793)
T ss_pred             eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence            799999999999954                   34456666666653211000               00112347888


Q ss_pred             eecccccCCCCCCcccceeeHHHHHHHHHhcccchhh
Q 042492           48 YMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAY   84 (137)
Q Consensus        48 ~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~   84 (137)
                      |+|||++.+..++.++|||||||+++||.++..++..
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence            9999999888899999999999999999988777653

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.69  E-value=4.8e-17  Score=114.22  Aligned_cols=85  Identities=32%  Similarity=0.411  Sum_probs=69.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++.......  .......++..|+|||.+.+..++.++|+||+|++++++.+|
T Consensus       126 ~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g  205 (266)
T cd06651         126 MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTE  205 (266)
T ss_pred             CeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHC
Confidence            479999999999999999999999999876532111  111223478889999999888889999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       206 ~~pf~~~  212 (266)
T cd06651         206 KPPWAEY  212 (266)
T ss_pred             CCCcccc
Confidence            9999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.69  E-value=2.2e-17  Score=118.32  Aligned_cols=83  Identities=30%  Similarity=0.302  Sum_probs=65.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||.++......... .....++..|++||.+.+..++.++|+||+|+++++|.+ +.
T Consensus       161 i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~  240 (307)
T cd05098         161 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG  240 (307)
T ss_pred             cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999987553221111 111123467999999988888999999999999999987 77


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       241 ~p~~~  245 (307)
T cd05098         241 SPYPG  245 (307)
T ss_pred             CCCCc
Confidence            77754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.69  E-value=6.2e-17  Score=113.55  Aligned_cols=83  Identities=27%  Similarity=0.318  Sum_probs=65.9

Q ss_pred             eEecCCCCCCEEeCCCC-----cEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW-----TAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-----~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el   75 (137)
                      ++|+|+||+||+++.+.     .++++|||+++........ ......++..|++||.+.+..++.++|+||||+++++|
T Consensus       127 i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  206 (269)
T cd05044         127 FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEI  206 (269)
T ss_pred             cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHH
Confidence            78999999999999877     8999999998755322111 11122346789999999888889999999999999999


Q ss_pred             Hh-cccchhh
Q 042492           76 EI-VLINWAY   84 (137)
Q Consensus        76 ~~-~~~~~~~   84 (137)
                      .+ |..||..
T Consensus       207 lt~g~~p~~~  216 (269)
T cd05044         207 LTLGQQPYPA  216 (269)
T ss_pred             HHcCCCCCcc
Confidence            87 8888864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=5.1e-17  Score=121.48  Aligned_cols=111  Identities=20%  Similarity=0.329  Sum_probs=83.9

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCC-cccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS-VKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||+||+|+.+- +-|.+|+.|||++..+.+...  .+..+|+..|-|||++.+..|. +++||||+||++|-+..|.
T Consensus       139 VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k--L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq  216 (864)
T KOG4717|consen  139 VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK--LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQ  216 (864)
T ss_pred             hhcccCCcceeEEeeecCceEeeeccccccCCCcch--hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCC
Confidence            68999999999775 678899999999988755444  3455799999999999988884 6799999999999999999


Q ss_pred             cchhhhhcchhhhhhccCC----ccccHHHHHHHHHHHHH
Q 042492           80 INWAYKCFIDREFNKLVHD----EEVNKKTLENMIKVRLW  115 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~  115 (137)
                      .||..... .+.+..+.|-    +.....+-+.++.-+|.
T Consensus       217 ~PFqeAND-SETLTmImDCKYtvPshvS~eCrdLI~sMLv  255 (864)
T KOG4717|consen  217 PPFQEAND-SETLTMIMDCKYTVPSHVSKECRDLIQSMLV  255 (864)
T ss_pred             Cccccccc-hhhhhhhhcccccCchhhhHHHHHHHHHHHh
Confidence            99986543 3456666665    23333444444444443

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.68  E-value=3.2e-17  Score=116.27  Aligned_cols=114  Identities=20%  Similarity=0.257  Sum_probs=77.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++....... ........+..|++||...+..++.++|+||||+++++|.+ +.
T Consensus       151 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~  230 (288)
T cd05050         151 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGM  230 (288)
T ss_pred             eecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999875432211 11112224567999999888888999999999999999986 77


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... ++....+.+.  .........++.++..+|
T Consensus       231 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  268 (288)
T cd05050         231 QPYYGMAH-EEVIYYVRDGNVLSCPDNCPLELYNLMRLC  268 (288)
T ss_pred             CCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            78753322 1222222222  111122334566777777

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.68  E-value=5.5e-17  Score=113.75  Aligned_cols=84  Identities=31%  Similarity=0.405  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|+|+||+||+++.++.++++|||.++.......  .......++..|++||...+..++.++|+||||++++++.+|.
T Consensus       127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~  206 (265)
T cd06652         127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK  206 (265)
T ss_pred             EecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCC
Confidence            79999999999999999999999999875432111  1112234788999999998878889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       207 ~p~~~~  212 (265)
T cd06652         207 PPWAEF  212 (265)
T ss_pred             CCCCcc
Confidence            999644

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.68  E-value=6.5e-17  Score=114.41  Aligned_cols=84  Identities=30%  Similarity=0.356  Sum_probs=66.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el   75 (137)
                      .|+|||+||+||+++.++.++++|||+++....... ......++..|++||.+.     ...++.++|+||+|+++++|
T Consensus       123 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el  201 (282)
T cd06643         123 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM  201 (282)
T ss_pred             CeeecCCCcccEEEccCCCEEEcccccccccccccc-ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH
Confidence            379999999999999999999999999875432211 122345788999999874     34467789999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .++..||...
T Consensus       202 ~~g~~p~~~~  211 (282)
T cd06643         202 AQIEPPHHEL  211 (282)
T ss_pred             ccCCCCcccc
Confidence            9999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.68  E-value=3.2e-17  Score=115.18  Aligned_cols=85  Identities=24%  Similarity=0.272  Sum_probs=63.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCC-------CCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKN-------TPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~-------~~~~~~~dv~s~G~~l   72 (137)
                      .|+|||+||+||+++.++.+|++|||+++....... .......++..|+|||+...       ..++.++|+||+|+++
T Consensus       120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l  199 (269)
T cd05042         120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM  199 (269)
T ss_pred             CEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH
Confidence            379999999999999999999999999865322211 11122234567999998642       3457789999999999


Q ss_pred             HHHHh-cccchhhh
Q 042492           73 LEIEI-VLINWAYK   85 (137)
Q Consensus        73 ~el~~-~~~~~~~~   85 (137)
                      +||.+ +..||...
T Consensus       200 ~el~~~~~~p~~~~  213 (269)
T cd05042         200 WELFTAADQPYPDL  213 (269)
T ss_pred             HHHHhCCCCCCCcC
Confidence            99987 67787643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.68  E-value=1.2e-16  Score=116.22  Aligned_cols=96  Identities=23%  Similarity=0.292  Sum_probs=75.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCC---------------------------------CCc------------
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP---------------------------------DQT------------   36 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~---------------------------------~~~------------   36 (137)
                      ||.|||||+|||+..+|++.|+||-++....-                                 ...            
T Consensus       200 ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~  279 (459)
T KOG0610|consen  200 IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRS  279 (459)
T ss_pred             eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcccccccccccccccc
Confidence            79999999999999999999999988753210                                 000            


Q ss_pred             ----------ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhhhhcchhhhhhccCC
Q 042492           37 ----------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD   98 (137)
Q Consensus        37 ----------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~~~~~~~~~~~~~   98 (137)
                                .......||..|.|||++.+...+.++|.|+||+++|||+.|..||..... ++.+..++..
T Consensus       280 ~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv~~  350 (459)
T KOG0610|consen  280 LPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIVGQ  350 (459)
T ss_pred             chhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHhcC
Confidence                      001234588899999999999999999999999999999999999986554 4556666644

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.68  E-value=5.3e-17  Score=113.24  Aligned_cols=80  Identities=31%  Similarity=0.436  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||.++.......    ....+..|++||.+.+..++.++|+||+|++++++.+ |..
T Consensus       123 i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~  198 (256)
T cd05039         123 FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  198 (256)
T ss_pred             ccchhcccceEEEeCCCCEEEcccccccccccccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCC
Confidence            78999999999999999999999999876532211    2224567999999988888899999999999999986 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       199 p~~~~  203 (256)
T cd05039         199 PYPRI  203 (256)
T ss_pred             CCCCC
Confidence            88644

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.68  E-value=3.7e-17  Score=115.67  Aligned_cols=81  Identities=27%  Similarity=0.510  Sum_probs=69.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+|+|+||+||+++.++.++++|||++.......   .....++..|++||.+.+..++.++|+||+|++++++.+|..
T Consensus       115 ~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~  191 (279)
T cd06619         115 KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF  191 (279)
T ss_pred             CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC
Confidence            47999999999999999999999999987653221   223458889999999988888999999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       192 pf~~  195 (279)
T cd06619         192 PYPQ  195 (279)
T ss_pred             Cchh
Confidence            9864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.68  E-value=5.3e-17  Score=113.15  Aligned_cols=80  Identities=23%  Similarity=0.304  Sum_probs=64.3

Q ss_pred             CeEecCCCCCCEEeCCCC-------cEEEEecCCceecCCCCcceeeecccccceecccccCCC--CCCcccceeeHHHH
Q 042492            1 LIIHCDIKPHNILMDEFW-------TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT--PISVKANVFNYGVV   71 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~dv~s~G~~   71 (137)
                      .|+|||+||+||+++.++       .++++|||+++....     .....++..|++||.+...  .++.++|+||+|++
T Consensus       121 ~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         121 KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             CeecccCccceEEEecCccccCCceeEEeCCCCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence            379999999999999877       799999999876532     1122356789999998766  67889999999999


Q ss_pred             HHHHHh-cccchhhh
Q 042492           72 LLEIEI-VLINWAYK   85 (137)
Q Consensus        72 l~el~~-~~~~~~~~   85 (137)
                      ++++.+ +..||...
T Consensus       196 ~~~l~~~~~~p~~~~  210 (259)
T cd05037         196 LLEICSNGEEPLSTL  210 (259)
T ss_pred             HHHHHhCCCCCcccC
Confidence            999988 56777544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.68  E-value=3.7e-17  Score=120.59  Aligned_cols=83  Identities=31%  Similarity=0.493  Sum_probs=72.0

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||+||+|+++...    +.++++|||++.....  .......+||+.|+|||++....++..+|+||+|++++.|..
T Consensus       156 vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~  233 (382)
T KOG0032|consen  156 VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS  233 (382)
T ss_pred             ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh
Confidence            7999999999999643    4799999999988754  333455679999999999998899999999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       234 G~~PF~~~~  242 (382)
T KOG0032|consen  234 GVPPFWGET  242 (382)
T ss_pred             CCCCCcCCC
Confidence            999997665

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.68  E-value=3.3e-17  Score=116.10  Aligned_cols=81  Identities=33%  Similarity=0.473  Sum_probs=67.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||++........   ....|+..|++||.... ..++.++|+||+|++++++.+|..
T Consensus       118 ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  194 (279)
T cd05633         118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHS  194 (279)
T ss_pred             cCCCCCCHHHEEECCCCCEEEccCCcceeccccCc---cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999875532221   22358899999998863 457889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       195 pf~~~  199 (279)
T cd05633         195 PFRQH  199 (279)
T ss_pred             CcCCC
Confidence            99643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.68  E-value=4.3e-17  Score=115.39  Aligned_cols=81  Identities=32%  Similarity=0.458  Sum_probs=67.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++.......   ....|+..|++||.+.++ .++.++|+||+|+++++|.+|..
T Consensus       118 i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~  194 (278)
T cd05606         118 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS  194 (278)
T ss_pred             EEcCCCCHHHEEECCCCCEEEccCcCccccCccCC---cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCC
Confidence            78999999999999999999999999875532221   223588999999998644 57889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       195 p~~~~  199 (278)
T cd05606         195 PFRQH  199 (278)
T ss_pred             CCCCC
Confidence            99754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=8.8e-18  Score=117.32  Aligned_cols=84  Identities=29%  Similarity=0.363  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||-|++++.+...|+||||++|..........+...-|.+|.|||++.+. .|+.+.||||.||++.|+.....
T Consensus       177 ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrI  256 (449)
T KOG0664|consen  177 ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKI  256 (449)
T ss_pred             hhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhh
Confidence            78999999999999999999999999997654444444555568899999998764 57999999999999999977777


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      -|...
T Consensus       257 LFQAq  261 (449)
T KOG0664|consen  257 LFQAA  261 (449)
T ss_pred             hhhcc
Confidence            66543

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.68  E-value=6e-17  Score=113.33  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=60.9

Q ss_pred             CeEecCCCCCCEEeCCCCc--------EEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWT--------AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVV   71 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~   71 (137)
                      .|+|||+||+||+++.++.        ++++|||++......     ....++..|++||.+.+. .++.++|+||+|++
T Consensus       120 ~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~  194 (258)
T cd05078         120 GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTT  194 (258)
T ss_pred             CeecCCCccceEEEecccccccCCCceEEecccccccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHH
Confidence            3799999999999976654        589999987654221     123477889999998763 46889999999999


Q ss_pred             HHHHHhcc-cchh
Q 042492           72 LLEIEIVL-INWA   83 (137)
Q Consensus        72 l~el~~~~-~~~~   83 (137)
                      ++++.+|. .||.
T Consensus       195 l~~l~~g~~~~~~  207 (258)
T cd05078         195 LWEIFSGGDKPLS  207 (258)
T ss_pred             HHHHHcCCCCChh
Confidence            99999985 5543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.68  E-value=3.8e-17  Score=116.73  Aligned_cols=84  Identities=26%  Similarity=0.445  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||+||+||+++.++.++++|||++......... .....++..|++||.+.+..++.++|+||||++++++.+|..|
T Consensus       136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~p  214 (296)
T cd06655         136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP  214 (296)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccchhccccccc-CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999988765332221 1223477899999999888888999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       215 f~~~~  219 (296)
T cd06655         215 YLNEN  219 (296)
T ss_pred             CCCCC
Confidence            86543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.68  E-value=8.2e-17  Score=112.26  Aligned_cols=80  Identities=33%  Similarity=0.406  Sum_probs=65.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++......    .....+..|++||.+.+..++.++|+||+|++++++.+ +..
T Consensus       121 ~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~  196 (254)
T cd05083         121 LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRA  196 (254)
T ss_pred             eeccccCcceEEEcCCCcEEECCCccceeccccC----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987542211    11224567999999988888999999999999999986 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       197 p~~~~  201 (254)
T cd05083         197 PYPKM  201 (254)
T ss_pred             CCccC
Confidence            88644

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=8.6e-17  Score=112.24  Aligned_cols=84  Identities=27%  Similarity=0.313  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC---CCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT---PISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|+|++|+||+++.++.++++|||.+........ ......++..|++||.....   .++.++|+||+|+++++|.+|
T Consensus       122 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg  200 (262)
T cd06613         122 KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAEL  200 (262)
T ss_pred             ceecCCChhhEEECCCCCEEECccccchhhhhhhh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhC
Confidence            68999999999999999999999999876533221 12234578889999998766   778899999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       201 ~~p~~~~~  208 (262)
T cd06613         201 QPPMFDLH  208 (262)
T ss_pred             CCCCCCCC
Confidence            99986543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=4.9e-17  Score=123.08  Aligned_cols=78  Identities=32%  Similarity=0.391  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .||||||.-|||+...|.+|++|||.+....+     ..+++||++|||||++.   .+.|+.++||||+|+++.|+...
T Consensus       147 ~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAER  221 (948)
T KOG0577|consen  147 RIHRDIKAGNILLSEPGLVKLADFGSASIMAP-----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  221 (948)
T ss_pred             HHhhhccccceEecCCCeeeeccccchhhcCc-----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhc
Confidence            38999999999999999999999998876533     24567999999999875   46789999999999999999777


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      .+|...
T Consensus       222 kPPlFn  227 (948)
T KOG0577|consen  222 KPPLFN  227 (948)
T ss_pred             CCCccC
Confidence            766543

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=5.5e-17  Score=113.81  Aligned_cols=84  Identities=30%  Similarity=0.373  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||+||+||+++.++.++++|||+++.......  .......++..|++||.+.+..++.++|+||+|++++++.+|.
T Consensus       127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  206 (264)
T cd06653         127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEK  206 (264)
T ss_pred             EecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999876532111  1112345788999999998877889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       207 ~p~~~~  212 (264)
T cd06653         207 PPWAEY  212 (264)
T ss_pred             CCCCcc
Confidence            999654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=1.1e-16  Score=106.14  Aligned_cols=76  Identities=25%  Similarity=0.289  Sum_probs=64.6

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccch
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINW   82 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~   82 (137)
                      +|..-||+||+++.++.+++  ||+++......      ..|+..|+|||++.+..++.++||||||+++|||.+|..||
T Consensus        33 lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~  104 (176)
T smart00750       33 LHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQ------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPY  104 (176)
T ss_pred             HHhcCCcccEeEcCccceee--ccceEeecccc------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCc
Confidence            57777999999999999998  99987653321      24789999999999988999999999999999999999998


Q ss_pred             hhhh
Q 042492           83 AYKC   86 (137)
Q Consensus        83 ~~~~   86 (137)
                      ....
T Consensus       105 ~~~~  108 (176)
T smart00750      105 NEER  108 (176)
T ss_pred             cccc
Confidence            6543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.68  E-value=7.5e-17  Score=113.40  Aligned_cols=84  Identities=24%  Similarity=0.291  Sum_probs=64.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCC-------CCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNT-------PISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~-------~~~~~~dv~s~G~~l~   73 (137)
                      ++|||+||+||+++.++.++++|||+++........ ......++..|+|||++...       .++.++|+||||++++
T Consensus       121 i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  200 (269)
T cd05087         121 FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIW  200 (269)
T ss_pred             EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHH
Confidence            799999999999999999999999998654222111 11223467789999987532       3477899999999999


Q ss_pred             HHHh-cccchhhh
Q 042492           74 EIEI-VLINWAYK   85 (137)
Q Consensus        74 el~~-~~~~~~~~   85 (137)
                      |+.+ |..||...
T Consensus       201 el~~~g~~p~~~~  213 (269)
T cd05087         201 ELFELGSQPYRHL  213 (269)
T ss_pred             HHHhCCCCCCCCC
Confidence            9985 88898643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.68  E-value=5.8e-17  Score=115.47  Aligned_cols=83  Identities=23%  Similarity=0.294  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh--c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI--V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~--~   78 (137)
                      ++|||+||+||+++.++.+|++|||+++........ ......++..|+|||...+..++.++|+||||+++++|.+  +
T Consensus       150 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~  229 (295)
T cd05097         150 FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCK  229 (295)
T ss_pred             eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999998765322211 1112234668999999888888999999999999999976  5


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       230 ~~p~~~  235 (295)
T cd05097         230 EQPYSL  235 (295)
T ss_pred             CCCCcc
Confidence            566654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.67  E-value=1.2e-16  Score=113.61  Aligned_cols=83  Identities=29%  Similarity=0.391  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      ++|||+||+||+++.++.++++|||++........ ......++..|++||.+.     ...++.++|+||+|+++|+|.
T Consensus       131 i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~  209 (292)
T cd06644         131 IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ-RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA  209 (292)
T ss_pred             eeecCCCcceEEEcCCCCEEEccCccceecccccc-ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHh
Confidence            78999999999999999999999998875432221 122334788999999874     344677899999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       210 ~g~~p~~~~  218 (292)
T cd06644         210 QIEPPHHEL  218 (292)
T ss_pred             cCCCCCccc
Confidence            999998643

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.67  E-value=1.8e-16  Score=112.22  Aligned_cols=82  Identities=30%  Similarity=0.364  Sum_probs=64.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+|||+||+||+++.++.++++|||+++..........  ....++..|++||...+..++.++|+||+|++++|+.++
T Consensus       128 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~  207 (284)
T cd05081         128 RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY  207 (284)
T ss_pred             CceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhc
Confidence            379999999999999999999999999886533222111  111234468999999888888999999999999999887


Q ss_pred             ccch
Q 042492           79 LINW   82 (137)
Q Consensus        79 ~~~~   82 (137)
                      ..++
T Consensus       208 ~~~~  211 (284)
T cd05081         208 SDKS  211 (284)
T ss_pred             CCcC
Confidence            6554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.67  E-value=8.1e-17  Score=114.79  Aligned_cols=83  Identities=23%  Similarity=0.283  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh--c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI--V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~--~   78 (137)
                      ++|||+||+||+++.++.++++|||+++......... .....++..|++||....+.++.++|+||||+++|||.+  +
T Consensus       151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~  230 (296)
T cd05095         151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK  230 (296)
T ss_pred             eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCC
Confidence            7999999999999999999999999987653222111 111224567999998887888999999999999999987  5


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       231 ~~p~~~  236 (296)
T cd05095         231 EQPYSQ  236 (296)
T ss_pred             CCCccc
Confidence            677753

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.67  E-value=4.1e-17  Score=116.55  Aligned_cols=85  Identities=27%  Similarity=0.437  Sum_probs=70.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++||||||+||+++.++.++++|||++......... .....++..|++||.+.+..++.++|+||+|++++++.+|..
T Consensus       135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~  213 (297)
T cd06656         135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP  213 (297)
T ss_pred             CcccCCCCHHHEEECCCCCEEECcCccceEccCCccC-cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            3789999999999999999999999998765332221 123347888999999988888899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       214 pf~~~~  219 (297)
T cd06656         214 PYLNEN  219 (297)
T ss_pred             CCCCCC
Confidence            996543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.67  E-value=1.2e-16  Score=112.32  Aligned_cols=85  Identities=27%  Similarity=0.385  Sum_probs=65.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecc---cccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIR---GTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~---~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      .++|||+||+||+++.++.++++|||+++........ ......   .+..|++||.+.+..++.++|+||+|++++|+.
T Consensus       126 g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l  205 (269)
T cd05065         126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM  205 (269)
T ss_pred             CEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHh
Confidence            3799999999999999999999999998755322111 111111   134699999998888899999999999999987


Q ss_pred             h-cccchhhh
Q 042492           77 I-VLINWAYK   85 (137)
Q Consensus        77 ~-~~~~~~~~   85 (137)
                      + |..||...
T Consensus       206 ~~g~~p~~~~  215 (269)
T cd05065         206 SYGERPYWDM  215 (269)
T ss_pred             cCCCCCCCCC
Confidence            5 88888543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.67  E-value=8.3e-17  Score=111.99  Aligned_cols=84  Identities=30%  Similarity=0.375  Sum_probs=69.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|||++|.||+++.++.++++|||++........ ......++..|++||.+.+..++.++|+||||+++++|.+|..
T Consensus       119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~  197 (256)
T cd06612         119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKP  197 (256)
T ss_pred             CcccCCCCcceEEECCCCcEEEcccccchhcccCcc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCC
Confidence            378999999999999999999999999876543321 1222347788999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       198 p~~~~  202 (256)
T cd06612         198 PYSDI  202 (256)
T ss_pred             CCCCc
Confidence            98654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=2.9e-17  Score=120.99  Aligned_cols=77  Identities=38%  Similarity=0.508  Sum_probs=62.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCC-CC-----cccceeeHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTP-IS-----VKANVFNYGVVLL   73 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~-~~-----~~~dv~s~G~~l~   73 (137)
                      +|+|||+|++|||+..+..+-|+|||++..+........ ....||.+|||||++.+.. +.     .+.||||+|.++|
T Consensus       336 ~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLW  415 (534)
T KOG3653|consen  336 PIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLW  415 (534)
T ss_pred             ccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999998865444322 2356999999999986532 22     3589999999999


Q ss_pred             HHHh
Q 042492           74 EIEI   77 (137)
Q Consensus        74 el~~   77 (137)
                      |+..
T Consensus       416 Ei~S  419 (534)
T KOG3653|consen  416 EIAS  419 (534)
T ss_pred             HHHh
Confidence            9943

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.67  E-value=1.1e-16  Score=112.99  Aligned_cols=81  Identities=30%  Similarity=0.539  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC----CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN----TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~----~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ++|||+||+||+++.++.+|++|||+++......  ......++..|++||.+.+    ..++.++|+||+|+++++|.+
T Consensus       125 i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~  202 (283)
T cd06617         125 VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELAT  202 (283)
T ss_pred             eecCCCCHHHEEECCCCCEEEeeccccccccccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHh
Confidence            7999999999999999999999999987653221  1122347888999998754    345788999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       203 g~~p~~~  209 (283)
T cd06617         203 GRFPYDS  209 (283)
T ss_pred             CCCCCCc
Confidence            9999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.67  E-value=4.9e-17  Score=124.34  Aligned_cols=83  Identities=29%  Similarity=0.454  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCC--CC--cEEEEecCCceecCCCCcceeeecccccceecccccC-CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDE--FW--TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||.||++-.  ++  ..|++|||.+|.+..+.  ...+..||..|.+||... ...|+..+|.|||||++|+..
T Consensus       141 IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  141 IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             ceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence            899999999999842  22  34999999999875443  456677999999999988 477888999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       219 TG~lPF~p~~  228 (732)
T KOG4250|consen  219 TGELPFIPFG  228 (732)
T ss_pred             ccCCCCCcCC
Confidence            9999986544

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.67  E-value=1.2e-16  Score=113.56  Aligned_cols=84  Identities=27%  Similarity=0.311  Sum_probs=66.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-----CCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-----PISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~dv~s~G~~l~el   75 (137)
                      .++|||+||+||+++.++.++++|||+++........ .....++..|++||.+...     .++.++|+||+|+++++|
T Consensus       148 ~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el  226 (291)
T cd06639         148 RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL  226 (291)
T ss_pred             CeeccCCCHHHEEEcCCCCEEEeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHH
Confidence            4799999999999999999999999998765322211 1223478889999987543     257899999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       227 ~~g~~p~~~~  236 (291)
T cd06639         227 GDGDPPLFDM  236 (291)
T ss_pred             hhCCCCCCCC
Confidence            9999998643

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.67  E-value=6.4e-17  Score=115.32  Aligned_cols=82  Identities=32%  Similarity=0.522  Sum_probs=66.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC----CCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP----ISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~dv~s~G~~l~el~   76 (137)
                      .|+|||++|+||+++.++.++++|||++........  .....++..|++||.+.+..    ++.++|+||||+++++|.
T Consensus       135 ~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~  212 (296)
T cd06618         135 GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA  212 (296)
T ss_pred             CEecCCCcHHHEEEcCCCCEEECccccchhccCCCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHH
Confidence            379999999999999999999999999876532222  12223677899999886543    678999999999999999


Q ss_pred             hcccchhh
Q 042492           77 IVLINWAY   84 (137)
Q Consensus        77 ~~~~~~~~   84 (137)
                      +|..||..
T Consensus       213 ~g~~p~~~  220 (296)
T cd06618         213 TGQFPYKN  220 (296)
T ss_pred             hCCCCCCc
Confidence            99999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=1.1e-16  Score=113.08  Aligned_cols=85  Identities=28%  Similarity=0.327  Sum_probs=67.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+|||+||+||+++.++.++++|||.++.......... ....++..|++||......++.++|+||||++++|+.+ |
T Consensus       129 ~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g  208 (279)
T cd05057         129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFG  208 (279)
T ss_pred             CEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCC
Confidence            379999999999999999999999999986643222111 11123467999999887888999999999999999987 8


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       209 ~~p~~~~  215 (279)
T cd05057         209 AKPYEGI  215 (279)
T ss_pred             CCCCCCC
Confidence            8998654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=2.5e-17  Score=125.60  Aligned_cols=81  Identities=30%  Similarity=0.442  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc-----CCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS-----KNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~-----~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |||||+|.-|||+..+|.++++|||++....... ..-..++||++|||||+.     ...+|++++||||||+++.||.
T Consensus       151 iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~-qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMA  229 (1187)
T KOG0579|consen  151 IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR-QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMA  229 (1187)
T ss_pred             hhhhhccccceEEEecCcEeeecccccccchhHH-hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHh
Confidence            7999999999999999999999999986543222 223456799999999975     4567899999999999999997


Q ss_pred             hcccchh
Q 042492           77 IVLINWA   83 (137)
Q Consensus        77 ~~~~~~~   83 (137)
                      .+..|..
T Consensus       230 qiEPPHh  236 (1187)
T KOG0579|consen  230 QIEPPHH  236 (1187)
T ss_pred             ccCCCcc
Confidence            6666543

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1.1e-17  Score=125.11  Aligned_cols=122  Identities=28%  Similarity=0.275  Sum_probs=84.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceee-ecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-LIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .+|||||-.+|+|+..++.+|++|||+++...  ...... ...-...|+|||.+..+.|+.++|||||||++||+.. |
T Consensus       282 ~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g  359 (474)
T KOG0194|consen  282 NCIHRDIAARNCLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG  359 (474)
T ss_pred             CCcchhHhHHHheecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence            37999999999999999999999999987542  111111 1123568999999999999999999999999999966 5


Q ss_pred             ccchhhhhcchhhhhhc-cCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKL-VHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||...... +-...+ ...  ...+...+..+..+.-+|            ++.+.|+..
T Consensus       360 ~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~  420 (474)
T KOG0194|consen  360 AEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL  420 (474)
T ss_pred             CCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence            6677654432 222333 222  223334445555555577            666666654

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.66  E-value=2.9e-17  Score=115.28  Aligned_cols=114  Identities=25%  Similarity=0.366  Sum_probs=79.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|++|+++||+++.++.+|++|||+++........ ..........|++||.+....++.++||||||+++||+.+ +.
T Consensus       124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~  203 (259)
T PF07714_consen  124 IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGK  203 (259)
T ss_dssp             EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            799999999999999999999999999876322221 1122235668999999988888999999999999999998 66


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||.... ..+....+.+.  ..........+.++...|
T Consensus       204 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C  241 (259)
T PF07714_consen  204 FPFSDYD-NEEIIEKLKQGQRLPIPDNCPKDIYSLIQQC  241 (259)
T ss_dssp             GTTTTSC-HHHHHHHHHTTEETTSBTTSBHHHHHHHHHH
T ss_pred             ccccccc-cccccccccccccceeccchhHHHHHHHHHH
Confidence            8876442 22223333333  222333445566777777

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.66  E-value=1.7e-16  Score=112.45  Aligned_cols=81  Identities=31%  Similarity=0.520  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC------CCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP------ISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~------~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.++.++++|||+++.......   ....++..|++||.+.+..      ++.++|+||+|++++++
T Consensus       124 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l  200 (286)
T cd06622         124 IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEM  200 (286)
T ss_pred             EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHH
Confidence            79999999999999999999999999876532211   2234778899999885443      47789999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       201 ~~g~~pf~~~  210 (286)
T cd06622         201 ALGRYPYPPE  210 (286)
T ss_pred             HhCCCCCCCc
Confidence            9999999643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.66  E-value=1.6e-17  Score=117.32  Aligned_cols=85  Identities=29%  Similarity=0.391  Sum_probs=73.1

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccch
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINW   82 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~   82 (137)
                      ||||+|.-|||+..+|..|++|||++..++...... ...+||+.|||||++..-.|+.++||||+|+...||..|..||
T Consensus       151 IHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR-NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPY  229 (502)
T KOG0574|consen  151 IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR-NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPY  229 (502)
T ss_pred             HHhhcccccEEEcccchhhhhhccccchhhhhHHhh-CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCc
Confidence            799999999999999999999999998775433333 3467999999999998888999999999999999999999998


Q ss_pred             hhhhcc
Q 042492           83 AYKCFI   88 (137)
Q Consensus        83 ~~~~~~   88 (137)
                      ..-...
T Consensus       230 sDIHPM  235 (502)
T KOG0574|consen  230 SDIHPM  235 (502)
T ss_pred             cccccc
Confidence            754433

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.66  E-value=8e-17  Score=112.88  Aligned_cols=84  Identities=35%  Similarity=0.443  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-----eeeecccccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-----TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      ++|||++|+||+++.++.++++|||.++........     ......++..|++||.+.+..++.++|+||+|++++++.
T Consensus       127 ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~  206 (267)
T cd06628         127 IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML  206 (267)
T ss_pred             cccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh
Confidence            789999999999999999999999998766421111     111234778899999998888888999999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       207 ~g~~p~~~~  215 (267)
T cd06628         207 TGKHPFPDC  215 (267)
T ss_pred             hCCCCCCCc
Confidence            999999754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.66  E-value=7.2e-17  Score=124.53  Aligned_cols=82  Identities=24%  Similarity=0.299  Sum_probs=61.1

Q ss_pred             CeEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCC----------------------
Q 042492            1 LIIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT----------------------   57 (137)
Q Consensus         1 ~iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~----------------------   57 (137)
                      .|+||||||+|||++. ++.+|++|||+++.+............+++.|+|||.+...                      
T Consensus       275 gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~  354 (566)
T PLN03225        275 GIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQL  354 (566)
T ss_pred             CEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccc
Confidence            3899999999999985 57899999999986533322223345688999999955321                      


Q ss_pred             CCCcccceeeHHHHHHHHHhcccch
Q 042492           58 PISVKANVFNYGVVLLEIEIVLINW   82 (137)
Q Consensus        58 ~~~~~~dv~s~G~~l~el~~~~~~~   82 (137)
                      .++.++|+||+||+++||.++..++
T Consensus       355 ~~~~k~DVwSlGviL~el~~~~~~~  379 (566)
T PLN03225        355 NLPDRFDIYSAGLIFLQMAFPNLRS  379 (566)
T ss_pred             cCCCCcccHHHHHHHHHHHhCcCCC
Confidence            1334569999999999998765543

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.66  E-value=7.3e-17  Score=112.49  Aligned_cols=83  Identities=29%  Similarity=0.462  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|+|+||+||+++.++.++++|||.++....... ......++..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       121 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHP  199 (255)
T ss_pred             cccCCCCcceEEECCCCcEEEcccCcceeeccccc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCC
Confidence            78999999999999999999999999876533222 11234478889999999888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       200 ~~~~  203 (255)
T cd08219         200 FQAN  203 (255)
T ss_pred             CCCC
Confidence            9754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.66  E-value=1.9e-16  Score=111.88  Aligned_cols=83  Identities=30%  Similarity=0.386  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++|+||+++.++.++++|||++......... .....++..|++||.+.+..++.++|+||||++++||.+|..|
T Consensus       122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p  200 (277)
T cd06640         122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK-RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             ccCcCCChhhEEEcCCCCEEEcccccceeccCCccc-cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCC
Confidence            789999999999999999999999998765432221 1223477889999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 ~~~~  204 (277)
T cd06640         201 NSDM  204 (277)
T ss_pred             CCCc
Confidence            8643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.66  E-value=1.1e-16  Score=112.99  Aligned_cols=83  Identities=31%  Similarity=0.338  Sum_probs=66.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||+||+||+++.++.++++|||.+..........  .....++..|++||...+..++.++|+||||++++||.++.
T Consensus       130 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~  209 (284)
T cd05038         130 YIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG  209 (284)
T ss_pred             eecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccC
Confidence            7899999999999999999999999988764222111  11122455699999998888899999999999999999988


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .|+..
T Consensus       210 ~p~~~  214 (284)
T cd05038         210 DPSQS  214 (284)
T ss_pred             CCccc
Confidence            87754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=2e-16  Score=111.13  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=61.9

Q ss_pred             eEecCCCCCCEEeCCCCc-------EEEEecCCceecCCCCcceeeecccccceecccccC-CCCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWT-------AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~   73 (137)
                      |+|||+||+||+++.++.       ++++|||++......     ....++..|+|||.+. +..++.++|+||||+++|
T Consensus       126 ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  200 (262)
T cd05077         126 LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLW  200 (262)
T ss_pred             eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHH
Confidence            799999999999976543       799999988654221     1234778899999886 456788999999999999


Q ss_pred             HHH-hcccchhhh
Q 042492           74 EIE-IVLINWAYK   85 (137)
Q Consensus        74 el~-~~~~~~~~~   85 (137)
                      ||. .+..||...
T Consensus       201 el~~~~~~p~~~~  213 (262)
T cd05077         201 EICYNGEIPLKDK  213 (262)
T ss_pred             HHHhCCCCCCCCc
Confidence            997 477777543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.66  E-value=7.2e-17  Score=117.88  Aligned_cols=81  Identities=31%  Similarity=0.345  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++.......  .....++..|++||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~p  216 (353)
T cd07850         139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVL  216 (353)
T ss_pred             eeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCC
Confidence            79999999999999999999999999986532211  2233478889999999888899999999999999999999988


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       217 f~~  219 (353)
T cd07850         217 FPG  219 (353)
T ss_pred             CCC
Confidence            854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.66  E-value=1e-16  Score=120.99  Aligned_cols=115  Identities=21%  Similarity=0.251  Sum_probs=84.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-cceeeecccccceecccccCCCCCCcccceeeHHHHHHHHH--hc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE--IV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~--~~   78 (137)
                      ++|||+.+.|+|+++.+.+|++|||.+|.+-... .+......-..+|||+|.+..++|+.++|+|+||+++||+.  ..
T Consensus       658 fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~  737 (807)
T KOG1094|consen  658 FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCR  737 (807)
T ss_pred             hhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHh
Confidence            6899999999999999999999999998552222 22222333467899999999999999999999999999984  45


Q ss_pred             ccchhhhhcch--hhhhhccCC------ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFID--REFNKLVHD------EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~l~C  116 (137)
                      ..||.....++  ++...+.+.      ..-+.-+...+.++++.|
T Consensus       738 e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~C  783 (807)
T KOG1094|consen  738 EQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRC  783 (807)
T ss_pred             hCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHH
Confidence            56775443322  233444443      123445667788999999

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.66  E-value=1.6e-16  Score=112.58  Aligned_cols=81  Identities=25%  Similarity=0.384  Sum_probs=64.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .++|||+||+||+++.++.++++|||+++........  ......++..|++||.+.+..++.++|+||+|++++++.++
T Consensus       129 gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~  208 (284)
T cd05079         129 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTY  208 (284)
T ss_pred             CeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcC
Confidence            3799999999999999999999999998865332221  11123356679999998888888999999999999999876


Q ss_pred             ccc
Q 042492           79 LIN   81 (137)
Q Consensus        79 ~~~   81 (137)
                      ..+
T Consensus       209 ~~~  211 (284)
T cd05079         209 CDS  211 (284)
T ss_pred             CCC
Confidence            544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.66  E-value=1.4e-16  Score=113.22  Aligned_cols=81  Identities=27%  Similarity=0.362  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||++|.||+++.++.++++|||+++.....    .....++..|++||.+.+...+.++|+||+|+++++|.+|..|
T Consensus       122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  197 (290)
T cd05580         122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPP  197 (290)
T ss_pred             EecCCCCHHHEEECCCCCEEEeeCCCccccCCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999998765332    1233478899999999887788899999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       198 ~~~~~  202 (290)
T cd05580         198 FFDDN  202 (290)
T ss_pred             CCCCC
Confidence            86443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.66  E-value=5.8e-17  Score=115.59  Aligned_cols=83  Identities=25%  Similarity=0.400  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+||+||+++.++.++++|||++......... .....++..|+|||...+..++.++|+||+|++++|+.+|..|
T Consensus       139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p  217 (292)
T cd06658         139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP  217 (292)
T ss_pred             EeecCCCHHHEEEcCCCCEEEccCcchhhccccccc-CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999998754322211 1223478899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       218 ~~~~  221 (292)
T cd06658         218 YFNE  221 (292)
T ss_pred             CCCC
Confidence            8643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.65  E-value=2.2e-16  Score=109.80  Aligned_cols=84  Identities=32%  Similarity=0.369  Sum_probs=67.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .++|||+||+||+++.++.++++|||+++..............++..|++||...+..++.++|+||+|++++++.+ +.
T Consensus       123 ~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~  202 (258)
T smart00219      123 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE  202 (258)
T ss_pred             CeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCC
Confidence            37899999999999999999999999998764432221112236678999999887778999999999999999987 67


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       203 ~p~~~  207 (258)
T smart00219      203 SPYPG  207 (258)
T ss_pred             CCCCC
Confidence            77754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.65  E-value=1.1e-16  Score=113.17  Aligned_cols=83  Identities=25%  Similarity=0.355  Sum_probs=66.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+|||+|++||+++.++.++++|||++........ ......++..|+|||.+.     ...++.++|+||+|+++++|.
T Consensus       142 ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~  220 (282)
T cd06636         142 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA  220 (282)
T ss_pred             cccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHH
Confidence            78999999999999999999999999875432111 122345788999999875     345678899999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      ++..||...
T Consensus       221 ~g~~p~~~~  229 (282)
T cd06636         221 EGAPPLCDM  229 (282)
T ss_pred             hCCCCcccc
Confidence            999999643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.65  E-value=1.3e-16  Score=124.39  Aligned_cols=114  Identities=23%  Similarity=0.255  Sum_probs=88.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-----CCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-----PISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----~~~~~~dv~s~G~~l~el~   76 (137)
                      +||||+|..|||+..++.+|++|||++..++....+. .+.+||+.|||||++...     .|+.++|+||+|++..||.
T Consensus       144 viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grR-nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEla  222 (953)
T KOG0587|consen  144 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRR-NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMA  222 (953)
T ss_pred             eeeecccCceEEEeccCcEEEeeeeeeeeeecccccc-cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhc
Confidence            6999999999999999999999999998875444333 345699999999988533     3678899999999999999


Q ss_pred             hcccchhhhhcchhhhhhccCCc---cccHHHHHHHHHHHHHh
Q 042492           77 IVLINWAYKCFIDREFNKLVHDE---EVNKKTLENMIKVRLWC  116 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~C  116 (137)
                      .|-+|+.........+.-...++   .-+...-++..+....|
T Consensus       223 dG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~c  265 (953)
T KOG0587|consen  223 EGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTC  265 (953)
T ss_pred             CCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHH
Confidence            99999887665554444444442   23456667777778888

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.65  E-value=1.4e-16  Score=111.04  Aligned_cols=85  Identities=29%  Similarity=0.476  Sum_probs=70.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|+|++|+||+++.++.++++|||++......... .....++..|++||.+.+..++.++|+||+|++++++.+|..
T Consensus       130 ~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  208 (265)
T cd08217         130 TVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP  208 (265)
T ss_pred             cceecCCCHHHEEEecCCCEEEecccccccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence            3799999999999999999999999998876433221 223357889999999988888899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       209 p~~~~~  214 (265)
T cd08217         209 PFTARN  214 (265)
T ss_pred             cccCcC
Confidence            987543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.65  E-value=9.9e-17  Score=111.71  Aligned_cols=84  Identities=33%  Similarity=0.516  Sum_probs=70.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-CCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.++++|||.+...... ........++..|+|||... +...+.++|+||+|+++++|.++.
T Consensus       118 ~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~  196 (260)
T PF00069_consen  118 GIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN-NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGK  196 (260)
T ss_dssp             TEEESSBSGGGEEESTTSEEEESSGTTTEESTST-TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3799999999999999999999999998764222 22233445788999999988 777889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       197 ~p~~~~  202 (260)
T PF00069_consen  197 LPFEES  202 (260)
T ss_dssp             SSSTTS
T ss_pred             cccccc
Confidence            999865

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.65  E-value=5.5e-17  Score=124.52  Aligned_cols=113  Identities=23%  Similarity=0.296  Sum_probs=86.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-ee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      +|||||-.+|+++.....+||+|||+.|.+..+... .. ....-.+.|.|||.+....|+.++|+|+|||++|||++ |
T Consensus       233 lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyG  312 (1039)
T KOG0199|consen  233 LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYG  312 (1039)
T ss_pred             hhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccC
Confidence            589999999999999999999999999977543321 11 11223457999999999999999999999999999976 5


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                      .-||.....  ..+.+.+|.   -.-+..+.+++..+++.|
T Consensus       313 EePW~G~~g--~qIL~~iD~~erLpRPk~csedIY~imk~c  351 (1039)
T KOG0199|consen  313 EEPWVGCRG--IQILKNIDAGERLPRPKYCSEDIYQIMKNC  351 (1039)
T ss_pred             CCCCCCCCH--HHHHHhccccccCCCCCCChHHHHHHHHHh
Confidence            689975432  223344444   234567888899999999

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.65  E-value=2.1e-16  Score=110.18  Aligned_cols=83  Identities=29%  Similarity=0.480  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++|+||+++.++.+|++|||+++....... ......++..|.+||...+..++.++|+||+|+++++|.++..|
T Consensus       122 i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08221         122 ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRT  200 (256)
T ss_pred             ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999886643332 22234578899999999887788899999999999999999988


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 ~~~~  204 (256)
T cd08221         201 FDAT  204 (256)
T ss_pred             CCCC
Confidence            8643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.65  E-value=6.8e-17  Score=115.50  Aligned_cols=83  Identities=28%  Similarity=0.417  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||+|++||+++.++.++++|||+++........ .....++..|++||.+.+..++.++|+||+|++++||.+|..|
T Consensus       138 ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  216 (297)
T cd06659         138 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPP  216 (297)
T ss_pred             eecCCCCHHHeEEccCCcEEEeechhHhhccccccc-ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999998754322211 2234578899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       217 ~~~~  220 (297)
T cd06659         217 YFSD  220 (297)
T ss_pred             CCCC
Confidence            8643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.5e-16  Score=112.01  Aligned_cols=82  Identities=30%  Similarity=0.385  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++|+||+++.++.++++|||+++....... ......++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p  197 (274)
T cd06609         119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP  197 (274)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccceeeccccc-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999987643322 12233477889999999888889999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       198 ~~~  200 (274)
T cd06609         198 LSD  200 (274)
T ss_pred             ccc
Confidence            864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.65  E-value=1.7e-16  Score=111.98  Aligned_cols=83  Identities=31%  Similarity=0.384  Sum_probs=68.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|+|++|+||+++.++.++++|||+++....... ......++..|++||.+.+..++.++|+||||++++|+.+|..
T Consensus       121 ~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~  199 (277)
T cd06642         121 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP  199 (277)
T ss_pred             CeeccCCChheEEEeCCCCEEEccccccccccCcch-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCC
Confidence            378999999999999999999999999876533221 1122347788999999988888999999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       200 p~~~  203 (277)
T cd06642         200 PNSD  203 (277)
T ss_pred             CCcc
Confidence            8853

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.65  E-value=2.7e-16  Score=110.65  Aligned_cols=83  Identities=20%  Similarity=0.270  Sum_probs=62.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCC-------CCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKN-------TPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~-------~~~~~~~dv~s~G~~l~   73 (137)
                      ++|||+||+||+++.++.++++|||++........ .......++..|++||++..       ..++.++|+||||++++
T Consensus       120 i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~  199 (268)
T cd05086         120 FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLW  199 (268)
T ss_pred             eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHH
Confidence            79999999999999999999999998754211111 11123347788999998742       23467899999999999


Q ss_pred             HHHh-cccchhh
Q 042492           74 EIEI-VLINWAY   84 (137)
Q Consensus        74 el~~-~~~~~~~   84 (137)
                      ||.+ +..||..
T Consensus       200 el~~~~~~p~~~  211 (268)
T cd05086         200 ELFENAAQPYSH  211 (268)
T ss_pred             HHHhCCCCCCCC
Confidence            9976 4567743

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.65  E-value=9.6e-17  Score=112.97  Aligned_cols=83  Identities=24%  Similarity=0.281  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |.|||+||+|+|...   +...|++|||+++.-..  .....+.+-|++|.|||++...+|+..+|+||+||++|-|+.|
T Consensus       182 IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG  259 (400)
T KOG0604|consen  182 IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG  259 (400)
T ss_pred             hhhccCChhheeeecCCCCcceEecccccccccCC--CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence            679999999999963   55679999999986432  2223345579999999999988899999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       260 yPPFYS~h  267 (400)
T KOG0604|consen  260 YPPFYSNH  267 (400)
T ss_pred             CCcccccC
Confidence            99998754

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.64  E-value=2.4e-16  Score=111.58  Aligned_cols=84  Identities=27%  Similarity=0.314  Sum_probs=67.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el   75 (137)
                      .|+|||+||+||+++.++.++++|||+++........ .....|+..|+|||.+..     ..++.++|+||+|+++++|
T Consensus       144 ~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el  222 (286)
T cd06638         144 KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL  222 (286)
T ss_pred             CccccCCCHHhEEECCCCCEEEccCCceeecccCCCc-cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHH
Confidence            3789999999999999999999999998865332221 223358889999998753     3467899999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .++..||...
T Consensus       223 ~~g~~p~~~~  232 (286)
T cd06638         223 GDGDPPLADL  232 (286)
T ss_pred             hcCCCCCCCC
Confidence            9999998644

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.64  E-value=2e-16  Score=111.00  Aligned_cols=84  Identities=25%  Similarity=0.309  Sum_probs=66.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      .|+|||+||.||+++.++.++++|||+++........ .....++..|++||.+.   ...++.++|+||+|+++++|.+
T Consensus       126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~  204 (267)
T cd06646         126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK-RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE  204 (267)
T ss_pred             CccccCCCHHHEEECCCCCEEECcCccceeecccccc-cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh
Confidence            3799999999999999999999999998865322211 12234788999999874   3446788999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      +..||...
T Consensus       205 g~~p~~~~  212 (267)
T cd06646         205 LQPPMFDL  212 (267)
T ss_pred             CCCCcccc
Confidence            99998543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.64  E-value=8.7e-16  Score=110.06  Aligned_cols=79  Identities=34%  Similarity=0.401  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|||++|+||+++.++.++++|||++.......     ...++..|++||.+.   ...++.++|+||||+++|++.+|
T Consensus       136 i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg  210 (307)
T cd06607         136 RIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN-----SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (307)
T ss_pred             ceecCCCcccEEECCCCCEEEeecCcceecCCCC-----CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC
Confidence            6899999999999999999999999987653221     234778899999874   34578899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       211 ~~p~~~~  217 (307)
T cd06607         211 KPPLFNM  217 (307)
T ss_pred             CCCCCCc
Confidence            9998643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.64  E-value=2.6e-16  Score=110.76  Aligned_cols=83  Identities=20%  Similarity=0.279  Sum_probs=65.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++..............++..|++||.+.+...+.++|+||+|++++++.+ +..
T Consensus       138 i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~  217 (275)
T cd05046         138 FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGEL  217 (275)
T ss_pred             cccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999886542222111122335667999999887778889999999999999987 677


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       218 p~~~  221 (275)
T cd05046         218 PFYG  221 (275)
T ss_pred             Cccc
Confidence            8753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.64  E-value=1e-16  Score=121.88  Aligned_cols=114  Identities=21%  Similarity=0.270  Sum_probs=86.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHH-Hhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI-EIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el-~~~~~   80 (137)
                      .+||||..+|||+....-+|++|||++|.+........+...-...||+||.+....|+.++|||=||+.+||+ ..|..
T Consensus       512 fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvk  591 (974)
T KOG4257|consen  512 FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVK  591 (974)
T ss_pred             hhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCC
Confidence            48999999999999999999999999997744333222222235689999999999999999999999999997 56889


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||.+-...+ -+..+-.+  .+.+..++-.+..++-+|
T Consensus       592 PfqgvkNsD-VI~~iEnGeRlP~P~nCPp~LYslmskc  628 (974)
T KOG4257|consen  592 PFQGVKNSD-VIGHIENGERLPCPPNCPPALYSLMSKC  628 (974)
T ss_pred             ccccccccc-eEEEecCCCCCCCCCCCChHHHHHHHHH
Confidence            998654322 22233333  345667777788888888

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.64  E-value=1.5e-16  Score=111.52  Aligned_cols=82  Identities=23%  Similarity=0.316  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|||+||+||+++.++.++++|||++........ ......|+..|+|||.+.   ...++.++|+||+|+++++|.++
T Consensus       127 i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~  205 (267)
T cd06645         127 KMHRDIKGANILLTDNGHVKLADFGVSAQITATIA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAEL  205 (267)
T ss_pred             eecCCCCHHHEEECCCCCEEECcceeeeEccCccc-ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcC
Confidence            78999999999999999999999999876532211 122335888999999874   44578899999999999999999


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       206 ~~p~~~  211 (267)
T cd06645         206 QPPMFD  211 (267)
T ss_pred             CCCccc
Confidence            988854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.3e-16  Score=113.34  Aligned_cols=85  Identities=26%  Similarity=0.318  Sum_probs=68.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc----------------------------eeeecccccceecccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR----------------------------TFTLIRGTRGYMAPEW   53 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~----------------------------~~~~~~~~~~~~ape~   53 (137)
                      ++||||||+||+++.++.++++|||++.........                            ......|+..|++||.
T Consensus       124 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~  203 (316)
T cd05574         124 IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEV  203 (316)
T ss_pred             eeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHH
Confidence            689999999999999999999999988654221110                            0112347788999999


Q ss_pred             cCCCCCCcccceeeHHHHHHHHHhcccchhhhh
Q 042492           54 SKNTPISVKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        54 ~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      +.+..++.++|+||+|++++++.+|..||....
T Consensus       204 ~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         204 ISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             HcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            988888999999999999999999999986443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.64  E-value=1.8e-16  Score=112.08  Aligned_cols=83  Identities=33%  Similarity=0.384  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||++++||+++.++.++++|||++...............++..|++||.+.+. .++.++|+||+|++++++.+|..
T Consensus       121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  200 (288)
T cd07833         121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP  200 (288)
T ss_pred             eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999876643332122334578889999999877 77889999999999999999998


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      +|..
T Consensus       201 ~~~~  204 (288)
T cd07833         201 LFPG  204 (288)
T ss_pred             CCCC
Confidence            8864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.64  E-value=1.7e-16  Score=112.79  Aligned_cols=83  Identities=24%  Similarity=0.332  Sum_probs=66.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... ......++..|++||.+.+. .++.++|+||+|++++++.+|..
T Consensus       124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  202 (291)
T cd07870         124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQP  202 (291)
T ss_pred             cccCCCChHHEEEcCCCcEEEeccccccccCCCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999875422211 11223467889999988653 46788999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       203 ~f~~~  207 (291)
T cd07870         203 AFPGV  207 (291)
T ss_pred             CCCCc
Confidence            98643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.64  E-value=1.4e-16  Score=111.45  Aligned_cols=81  Identities=33%  Similarity=0.563  Sum_probs=68.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+|++||+++.++.++++|||.+.........   ...++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       122 i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  198 (265)
T cd06605         122 IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFP  198 (265)
T ss_pred             eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999988654322111   14578889999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       199 ~~~~  202 (265)
T cd06605         199 YPPE  202 (265)
T ss_pred             CCcc
Confidence            8654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.64  E-value=1.1e-16  Score=113.10  Aligned_cols=81  Identities=22%  Similarity=0.317  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++....... ......++..|+|||.+.+.. ++.++|+||+|+++++|.+|..
T Consensus       120 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~  198 (284)
T cd07839         120 VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR  198 (284)
T ss_pred             EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999876532211 122334678899999876543 6889999999999999999888


Q ss_pred             chh
Q 042492           81 NWA   83 (137)
Q Consensus        81 ~~~   83 (137)
                      |+.
T Consensus       199 p~~  201 (284)
T cd07839         199 PLF  201 (284)
T ss_pred             CCc
Confidence            764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.63  E-value=4e-16  Score=109.55  Aligned_cols=83  Identities=31%  Similarity=0.427  Sum_probs=65.8

Q ss_pred             CeEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~   77 (137)
                      .|+|||+||+||+++. ++.++++|||++........ ......++..|++||.+....  ++.++|+||+|++++++.+
T Consensus       128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~  206 (268)
T cd06624         128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT  206 (268)
T ss_pred             CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh
Confidence            3799999999999976 67899999999876532222 122234788999999886543  6788999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      +..||..
T Consensus       207 g~~p~~~  213 (268)
T cd06624         207 GKPPFIE  213 (268)
T ss_pred             CCCCCcc
Confidence            9999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.63  E-value=3.9e-16  Score=111.80  Aligned_cols=85  Identities=27%  Similarity=0.394  Sum_probs=67.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--------------ceeeecccccceecccccCCCCCCccccee
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--------------RTFTLIRGTRGYMAPEWSKNTPISVKANVF   66 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~   66 (137)
                      .++|||+||.||+++.++.++++|||+++.......              .......++..|++||.+.+..++.++|+|
T Consensus       121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  200 (305)
T cd05609         121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWW  200 (305)
T ss_pred             CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHH
Confidence            378999999999999999999999998864211000              001123467789999999888889999999


Q ss_pred             eHHHHHHHHHhcccchhhh
Q 042492           67 NYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        67 s~G~~l~el~~~~~~~~~~   85 (137)
                      |||++++|+.+|..||...
T Consensus       201 slG~vl~el~~g~~pf~~~  219 (305)
T cd05609         201 AMGIILYEFLVGCVPFFGD  219 (305)
T ss_pred             HHHHHHHHHHhCCCCCCCC
Confidence            9999999999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.63  E-value=4.5e-16  Score=107.45  Aligned_cols=82  Identities=32%  Similarity=0.436  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++|+||+++.++.++|+|||.+........  .....++..|++||.+.+...+.++|+||+|++++++.+|..|
T Consensus       119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  196 (253)
T cd05122         119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP  196 (253)
T ss_pred             EecCCCCHHHEEEccCCeEEEeecccccccccccc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999876643322  2233478889999999887788999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       197 ~~~~  200 (253)
T cd05122         197 YSEL  200 (253)
T ss_pred             CCCC
Confidence            8654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.63  E-value=2.9e-16  Score=111.51  Aligned_cols=83  Identities=25%  Similarity=0.395  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||++|+||+++.++.++++|||.+........ ......|+..|++||...+..++.++|+||+|++++++.+|..|
T Consensus       136 i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p  214 (285)
T cd06648         136 VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPP  214 (285)
T ss_pred             eecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999998765432221 11233478899999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       215 ~~~~  218 (285)
T cd06648         215 YFNE  218 (285)
T ss_pred             CcCC
Confidence            8643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.63  E-value=3.8e-16  Score=111.37  Aligned_cols=84  Identities=27%  Similarity=0.439  Sum_probs=69.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|||+|++||+++.++.++++|||++........ ......++..|++||.+....++.++|+||||+++|++.+|..
T Consensus       135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~  213 (293)
T cd06647         135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP  213 (293)
T ss_pred             CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            378999999999999999999999998875533222 1222347888999999988888899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       214 pf~~~  218 (293)
T cd06647         214 PYLNE  218 (293)
T ss_pred             CCCCC
Confidence            99654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.63  E-value=4.6e-16  Score=110.37  Aligned_cols=83  Identities=29%  Similarity=0.382  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||++|.||+++.++.++++|||+++..............++..|++||...+..  .+.++|+||+|+++++|.+|.
T Consensus       126 ~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~  205 (288)
T cd05583         126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA  205 (288)
T ss_pred             eeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC
Confidence            789999999999999999999999998765433222222334788999999886654  678899999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       206 ~p~~~  210 (288)
T cd05583         206 SPFTV  210 (288)
T ss_pred             CCccc
Confidence            99853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.63  E-value=3.1e-16  Score=110.52  Aligned_cols=79  Identities=29%  Similarity=0.381  Sum_probs=67.9

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+||+||+++.++ .++++|||+++......     ...++..|+|||.+.+..++.++|+||+|++++++.+|..
T Consensus       130 i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~  204 (267)
T PHA03390        130 IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKH  204 (267)
T ss_pred             eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            68999999999999888 89999999987653221     2347889999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       205 p~~~~  209 (267)
T PHA03390        205 PFKED  209 (267)
T ss_pred             CCCCC
Confidence            99743

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.63  E-value=4e-16  Score=109.14  Aligned_cols=83  Identities=31%  Similarity=0.399  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++++||+++.++.++++|||+++......  ......++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       114 ~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p  191 (262)
T cd05572         114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPP  191 (262)
T ss_pred             cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCC
Confidence            7899999999999999999999999988664332  12223578889999998877788999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       192 ~~~~~  196 (262)
T cd05572         192 FGEDD  196 (262)
T ss_pred             cCCCC
Confidence            97554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.63  E-value=3.6e-16  Score=108.95  Aligned_cols=83  Identities=31%  Similarity=0.480  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++++||+++.++.++++|||++......... .....++..|++||...+...+.++|+||||++++++.+|..|
T Consensus       122 i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08218         122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHA  200 (256)
T ss_pred             EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCC
Confidence            789999999999999999999999998765332211 1223477889999999888888999999999999999999998


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 ~~~~  204 (256)
T cd08218         201 FEAG  204 (256)
T ss_pred             ccCC
Confidence            8644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.63  E-value=4.7e-16  Score=108.65  Aligned_cols=84  Identities=35%  Similarity=0.483  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceee---ecccccceecccccCCCC---CCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT---LIRGTRGYMAPEWSKNTP---ISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~ape~~~~~~---~~~~~dv~s~G~~l~el   75 (137)
                      |+|+|+++.||+++.++.++++|||++............   ...++..|++||.+.+..   .+.++|+||||++++++
T Consensus       120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l  199 (264)
T cd06626         120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM  199 (264)
T ss_pred             cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHH
Confidence            689999999999999999999999998765433221111   234678899999987665   78899999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       200 ~~g~~pf~~~  209 (264)
T cd06626         200 ATGKRPWSEL  209 (264)
T ss_pred             HhCCCCccCC
Confidence            9999999643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.63  E-value=1.5e-16  Score=113.65  Aligned_cols=83  Identities=25%  Similarity=0.358  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... ......++..|++||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       125 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~  203 (301)
T cd07873         125 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRP  203 (301)
T ss_pred             eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999875432221 1122346788999998764 346788999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       204 ~f~~~  208 (301)
T cd07873         204 LFPGS  208 (301)
T ss_pred             CCCCC
Confidence            98654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=3.4e-16  Score=115.47  Aligned_cols=89  Identities=31%  Similarity=0.373  Sum_probs=71.1

Q ss_pred             CeEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCC----CCCcccceee
Q 042492            1 LIIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNT----PISVKANVFN   67 (137)
Q Consensus         1 ~iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~----~~~~~~dv~s   67 (137)
                      ||||-|+||.|||+..   .|.+||.|||+++++......      ...-..||.+|++||.+.-+    +++.|+||||
T Consensus       590 PIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS  669 (775)
T KOG1151|consen  590 PIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS  669 (775)
T ss_pred             CeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEe
Confidence            8999999999999953   578899999999987433321      11234589999999988644    3688999999


Q ss_pred             HHHHHHHHHhcccchhhhhcch
Q 042492           68 YGVVLLEIEIVLINWAYKCFID   89 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~~~~~~   89 (137)
                      +||++|+.+.|..||......+
T Consensus       670 vGVIFyQClYGrKPFGhnqsQQ  691 (775)
T KOG1151|consen  670 VGVIFYQCLYGRKPFGHNQSQQ  691 (775)
T ss_pred             eehhhhhhhccCCCCCCchhHH
Confidence            9999999999999998765443

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.62  E-value=3.3e-16  Score=112.43  Aligned_cols=81  Identities=32%  Similarity=0.518  Sum_probs=68.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|||+||+||+++.++.++++|||++.......   .....++..|++||.+.+..++.++|+||||++++++.+|..
T Consensus       120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~  196 (308)
T cd06615         120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRY  196 (308)
T ss_pred             CEEECCCChHHEEEecCCcEEEccCCCcccccccc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCC
Confidence            37999999999999999999999999887543221   123457889999999888788899999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       197 p~~~  200 (308)
T cd06615         197 PIPP  200 (308)
T ss_pred             CCCC
Confidence            8853

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.62  E-value=2.2e-16  Score=114.55  Aligned_cols=83  Identities=30%  Similarity=0.447  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.++++|||+++........  ......++..|+|||.+.+ ..++.++|+||+|+++++|.+|
T Consensus       127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G  206 (336)
T cd07849         127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN  206 (336)
T ss_pred             eeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999998765322211  1123457889999998654 4578899999999999999999


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       207 ~~~f~~  212 (336)
T cd07849         207 RPLFPG  212 (336)
T ss_pred             CCCCCC
Confidence            999854

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.62  E-value=3.7e-16  Score=110.73  Aligned_cols=81  Identities=32%  Similarity=0.578  Sum_probs=68.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||+||+||+++.++.++++|||++........   ....++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       125 i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p  201 (284)
T cd06620         125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA---DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP  201 (284)
T ss_pred             eeccCCCHHHEEECCCCcEEEccCCcccchhhhcc---CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999998865422211   223578899999998888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       202 ~~~~  205 (284)
T cd06620         202 FAFS  205 (284)
T ss_pred             Cccc
Confidence            9743

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.62  E-value=2.8e-16  Score=110.07  Aligned_cols=83  Identities=25%  Similarity=0.346  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-----cceeeecccccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-----TRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+|+|++|+||+++.++.++++|||+++......     ........++..|++||...+..++.++|+||+|++++++.
T Consensus       123 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~  202 (265)
T cd06631         123 VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMA  202 (265)
T ss_pred             cccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHH
Confidence            7899999999999999999999999887542111     11112345788999999998888889999999999999999


Q ss_pred             hcccchhh
Q 042492           77 IVLINWAY   84 (137)
Q Consensus        77 ~~~~~~~~   84 (137)
                      +|..||..
T Consensus       203 ~g~~p~~~  210 (265)
T cd06631         203 TGKPPLAS  210 (265)
T ss_pred             hCCCcccc
Confidence            99999964

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.62  E-value=4.6e-16  Score=110.46  Aligned_cols=83  Identities=29%  Similarity=0.377  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC--CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT--PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|||++|+||+++.++.++++|||+++..............++..|++||.+...  .++.++|+||+|++++++.+|.
T Consensus       126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~  205 (290)
T cd05613         126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGA  205 (290)
T ss_pred             eeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999876533222222234578899999988653  3567899999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       206 ~p~~~  210 (290)
T cd05613         206 SPFTV  210 (290)
T ss_pred             CCCCc
Confidence            99853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=6.1e-16  Score=108.45  Aligned_cols=83  Identities=27%  Similarity=0.338  Sum_probs=66.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-----CCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-----TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s~G~~l~el~   76 (137)
                      ++|+|++|+||+++.++.++++|||.+........ ......++..|+|||.+..     ..++.++|+||+|++++++.
T Consensus       134 i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~  212 (275)
T cd06608         134 VIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA  212 (275)
T ss_pred             cccCCCCHHHEEEccCCeEEECCCccceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence            68999999999999999999999999876533222 1223347888999998743     23567899999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       213 ~g~~p~~~~  221 (275)
T cd06608         213 DGKPPLCDM  221 (275)
T ss_pred             hCCCCcccc
Confidence            999999643

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.62  E-value=5.1e-16  Score=108.37  Aligned_cols=84  Identities=33%  Similarity=0.509  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++++||+++.++.++++|||++.......... ....++..|++||...+..++.++|+||||++++++.+|..|
T Consensus       121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p  199 (264)
T cd06623         121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFP  199 (264)
T ss_pred             CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999988764333221 223477889999999888888999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       200 ~~~~~  204 (264)
T cd06623         200 FLPPG  204 (264)
T ss_pred             Ccccc
Confidence            86553

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.62  E-value=1e-15  Score=110.29  Aligned_cols=79  Identities=32%  Similarity=0.393  Sum_probs=65.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|||++|+||+++.++.++++|||++......     ....++..|++||.+.   ...++.++|+||||+++++|.+|
T Consensus       146 i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g  220 (317)
T cd06635         146 MIHRDIKAGNILLTEPGQVKLADFGSASIASPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  220 (317)
T ss_pred             cccCCCCcccEEECCCCCEEEecCCCccccCCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhC
Confidence            789999999999999999999999988654321     1234788899999873   34578899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       221 ~~p~~~~  227 (317)
T cd06635         221 KPPLFNM  227 (317)
T ss_pred             CCCCCCc
Confidence            9998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.62  E-value=4.1e-16  Score=110.19  Aligned_cols=84  Identities=33%  Similarity=0.451  Sum_probs=68.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+||+||+++.++.++++|||++........ ......++..|++||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~  199 (286)
T cd07847         121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQP  199 (286)
T ss_pred             ceecCCChhhEEEcCCCcEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999987643321 1122346788999998765 446889999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       200 p~~~~~  205 (286)
T cd07847         200 LWPGKS  205 (286)
T ss_pred             CCCCCC
Confidence            996543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.62  E-value=5.4e-16  Score=109.30  Aligned_cols=83  Identities=30%  Similarity=0.443  Sum_probs=68.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|+|++|+||+++.++.++++|||++......... .....|+..|++||.+.++ .++.++|+||+|+++|+|.+|..
T Consensus       122 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~  200 (277)
T cd06917         122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK-RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNP  200 (277)
T ss_pred             cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc-cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999998876443321 2233578899999987653 46889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       201 p~~~~  205 (277)
T cd06917         201 PYSDV  205 (277)
T ss_pred             CCCCC
Confidence            99643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.62  E-value=2.9e-16  Score=113.07  Aligned_cols=81  Identities=30%  Similarity=0.363  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEeC--------------------CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCc
Q 042492            2 IIHCDIKPHNILMD--------------------EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV   61 (137)
Q Consensus         2 iiHrdlk~~nill~--------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~   61 (137)
                      ++|-|+||+||++.                    ++..++++|||.++.-....    .....|..|.|||++.+-.++.
T Consensus       213 l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~  288 (415)
T KOG0671|consen  213 LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQ  288 (415)
T ss_pred             eeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCC
Confidence            78999999999982                    13457899999987642222    3445788999999999999999


Q ss_pred             ccceeeHHHHHHHHHhcccchhhhh
Q 042492           62 KANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        62 ~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      ++|+||+||++.|+.+|..-|....
T Consensus       289 pCDvWSiGCIL~ElytG~~LFqtHe  313 (415)
T KOG0671|consen  289 PCDVWSIGCILVELYTGETLFQTHE  313 (415)
T ss_pred             ccCceeeeeEEEEeeccceecccCC
Confidence            9999999999999999988877554

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.62  E-value=7.1e-16  Score=107.66  Aligned_cols=83  Identities=39%  Similarity=0.470  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++|+||+++.++.++++|||++.......  ......++..|++||...+..++.++|+||+|++++++.+|..|
T Consensus       121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  198 (258)
T cd05578         121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRP  198 (258)
T ss_pred             eeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCC
Confidence            7899999999999999999999999987653322  12234477889999999887789999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       199 ~~~~~  203 (258)
T cd05578         199 YRGHS  203 (258)
T ss_pred             CCCCC
Confidence            87554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.61  E-value=5.7e-16  Score=108.25  Aligned_cols=84  Identities=31%  Similarity=0.449  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~   77 (137)
                      ++|||++|+||+++.++.++++|||++.........   ......++..|++||.+... .++.++|+||+|+++++|.+
T Consensus       123 i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~  202 (267)
T cd06610         123 QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT  202 (267)
T ss_pred             eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh
Confidence            789999999999999999999999998765433221   11233478899999988766 67889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       203 g~~p~~~~  210 (267)
T cd06610         203 GAAPYSKY  210 (267)
T ss_pred             CCCCcccc
Confidence            99999644

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.61  E-value=8.9e-16  Score=106.97  Aligned_cols=85  Identities=32%  Similarity=0.448  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-------ceeeecccccceecccccCCCCCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~e   74 (137)
                      ++|||++++||+++.++.++++|||++........       .......++..|++||.......+.++|+||+|+++++
T Consensus       114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~  193 (265)
T cd05579         114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYE  193 (265)
T ss_pred             eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHH
Confidence            78999999999999999999999998875432211       11223347788999999888778889999999999999


Q ss_pred             HHhcccchhhhh
Q 042492           75 IEIVLINWAYKC   86 (137)
Q Consensus        75 l~~~~~~~~~~~   86 (137)
                      +.+|..||....
T Consensus       194 l~~g~~p~~~~~  205 (265)
T cd05579         194 FLVGIPPFHGET  205 (265)
T ss_pred             HHhCCCCCCCCC
Confidence            999999986443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=5e-16  Score=111.31  Aligned_cols=82  Identities=24%  Similarity=0.365  Sum_probs=71.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||.||+|.+|+|++..+++|+.|+|.++.-..+... ..+.+||+-|.|||++.+..|...+|.|++|++++||+.|+.|
T Consensus       372 iiyrdlkldnvlldaeghikltdygmcke~l~~gd~-tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrsp  450 (593)
T KOG0695|consen  372 IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT-TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP  450 (593)
T ss_pred             eeeeeccccceEEccCCceeecccchhhcCCCCCcc-cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999864332222 2356799999999999999999999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |.-
T Consensus       451 fdi  453 (593)
T KOG0695|consen  451 FDI  453 (593)
T ss_pred             cce
Confidence            954

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.61  E-value=5.1e-16  Score=107.35  Aligned_cols=82  Identities=23%  Similarity=0.291  Sum_probs=65.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||+|+.|+|+++++..+++|||++|.+.....   ...+...-|.+|.+||.+.+ ..++.+.|+|+.||++.||.+
T Consensus       145 ilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt  224 (376)
T KOG0669|consen  145 ILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT  224 (376)
T ss_pred             HHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence            68999999999999999999999999987632222   12233445889999998875 457889999999999999966


Q ss_pred             cccchh
Q 042492           78 VLINWA   83 (137)
Q Consensus        78 ~~~~~~   83 (137)
                      +.+-+.
T Consensus       225 rspimq  230 (376)
T KOG0669|consen  225 RSPIMQ  230 (376)
T ss_pred             cCcccc
Confidence            665543

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.61  E-value=4.5e-16  Score=109.94  Aligned_cols=83  Identities=31%  Similarity=0.434  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++||||+|+||+++.++.++++|||.++......  ......++..|++||...+..++.++|+||+|++++++.+|..|
T Consensus       116 i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p  193 (277)
T cd05577         116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP  193 (277)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCC
Confidence            6899999999999999999999999887553211  11223467789999998887788999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       194 ~~~~~  198 (277)
T cd05577         194 FRQRK  198 (277)
T ss_pred             CCCCc
Confidence            96543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.61  E-value=3.3e-16  Score=110.68  Aligned_cols=84  Identities=27%  Similarity=0.371  Sum_probs=67.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+|||+||+||+++.++.++++|||++....... .......++..|+|||.+.+. .++.++|+||+|+++++|.+|.
T Consensus       121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~  199 (285)
T cd07861         121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK  199 (285)
T ss_pred             CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCC
Confidence            37999999999999999999999999987553221 112233467889999987643 4688899999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       200 ~~~~~~  205 (285)
T cd07861         200 PLFHGD  205 (285)
T ss_pred             CCCCCC
Confidence            888643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.61  E-value=1e-15  Score=106.53  Aligned_cols=82  Identities=32%  Similarity=0.582  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||++|+||+++.+ +.++++|||.+........  .....++..|++||.+.+..++.++|+||+|++++++.++..
T Consensus       122 i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~  199 (256)
T cd08220         122 ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKR  199 (256)
T ss_pred             eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCC
Confidence            7999999999999854 4579999999886643222  122347889999999988888899999999999999999998


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 ~~~~~  204 (256)
T cd08220         200 AFEAA  204 (256)
T ss_pred             CcccC
Confidence            88644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.61  E-value=7.8e-16  Score=107.09  Aligned_cols=83  Identities=29%  Similarity=0.423  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|+|++++||+++.++.+|++|||++.......  ......++..|++||...... ++.++|+||+|++++++.+|..
T Consensus       123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~  200 (258)
T cd06632         123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKP  200 (258)
T ss_pred             cccCCCCHHHEEECCCCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999987653332  122344788899999887665 7889999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       201 pf~~~~  206 (258)
T cd06632         201 PWSQLE  206 (258)
T ss_pred             CcccCc
Confidence            986443

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.61  E-value=3.3e-16  Score=111.15  Aligned_cols=83  Identities=25%  Similarity=0.355  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++...... .......++..|++||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       124 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~  202 (291)
T cd07844         124 VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRP  202 (291)
T ss_pred             eecccCCHHHEEEcCCCCEEECccccccccCCCC-ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999987542211 11122235778999998865 447889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       203 ~~~~~  207 (291)
T cd07844         203 LFPGS  207 (291)
T ss_pred             CCCCC
Confidence            98543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.60  E-value=1.2e-15  Score=109.59  Aligned_cols=79  Identities=30%  Similarity=0.404  Sum_probs=65.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      .++|||++|+||+++.++.++++|||++.......     ...++..|++||.+.   ...++.++|+||+|++++++.+
T Consensus       135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  209 (308)
T cd06634         135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-----XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  209 (308)
T ss_pred             CcccCCCCHHhEEECCCCcEEECCcccceeecCcc-----cccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence            37899999999999999999999999987653321     234778899999874   3456789999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       210 g~~p~~~  216 (308)
T cd06634         210 RKPPLFN  216 (308)
T ss_pred             CCCCCcc
Confidence            9988754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.60  E-value=1.3e-15  Score=108.02  Aligned_cols=84  Identities=29%  Similarity=0.426  Sum_probs=68.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .++|+|++|+||+++.++.++++|||++........ ......++..|++||.+.+..++.++|+||+|++++++.+|..
T Consensus       136 gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~  214 (286)
T cd06614         136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP  214 (286)
T ss_pred             CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCC
Confidence            378999999999999999999999998765432221 1122346788999999888888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       215 p~~~~  219 (286)
T cd06614         215 PYLRE  219 (286)
T ss_pred             CCCCC
Confidence            98643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.60  E-value=7.6e-16  Score=111.73  Aligned_cols=84  Identities=31%  Similarity=0.380  Sum_probs=67.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----ceeeecccccceecccccCC-CCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----RTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el   75 (137)
                      .|+|||+||+||+++.++.++++|||+++.......    .......++..|++||.+.+ ..++.++|+||||+++++|
T Consensus       127 ~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el  206 (337)
T cd07852         127 NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEM  206 (337)
T ss_pred             CeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHH
Confidence            379999999999999999999999999876533221    11223457889999998754 4467889999999999999


Q ss_pred             Hhcccchhh
Q 042492           76 EIVLINWAY   84 (137)
Q Consensus        76 ~~~~~~~~~   84 (137)
                      .+|..||..
T Consensus       207 ~tg~~pf~~  215 (337)
T cd07852         207 LLGKPLFPG  215 (337)
T ss_pred             HhCCCCCCC
Confidence            999999854

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.60  E-value=4.8e-16  Score=112.65  Aligned_cols=84  Identities=30%  Similarity=0.373  Sum_probs=67.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||+||+||+++.++.++|+|||+++........   ......|+..|++||...+ ..++.++|+||+|++++++..
T Consensus       126 ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~  205 (332)
T cd07857         126 VLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLG  205 (332)
T ss_pred             cccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999865322211   1123457889999998765 457889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       206 g~~pf~~~  213 (332)
T cd07857         206 RKPVFKGK  213 (332)
T ss_pred             CCcCCCCC
Confidence            99888643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.60  E-value=1.3e-15  Score=107.53  Aligned_cols=82  Identities=32%  Similarity=0.415  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++|.||+++.++.++++|||++........ ......++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       122 i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p  200 (277)
T cd06641         122 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPP  200 (277)
T ss_pred             eecCCCCHHhEEECCCCCEEEeecccceecccchh-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999876533221 11223477889999999888888899999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       201 ~~~  203 (277)
T cd06641         201 HSE  203 (277)
T ss_pred             CCc
Confidence            864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.60  E-value=1.7e-15  Score=106.54  Aligned_cols=83  Identities=31%  Similarity=0.420  Sum_probs=66.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|||++++||+++.++.++++|||+++........ ......++..|++||......  ++.++|+||+|++++++.+|
T Consensus       129 i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g  208 (272)
T cd06629         129 ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG  208 (272)
T ss_pred             eeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence            789999999999999999999999998754322111 122334788899999887654  68899999999999999999


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       209 ~~p~~~  214 (272)
T cd06629         209 RRPWSD  214 (272)
T ss_pred             CCCCcC
Confidence            999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.60  E-value=1.2e-15  Score=107.70  Aligned_cols=82  Identities=28%  Similarity=0.368  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++++||+++.++.++++|||++........  .....++..|++||.+.+..++.++|+||+|+++++|.++..+
T Consensus       128 i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~  205 (287)
T cd07838         128 IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPL  205 (287)
T ss_pred             eeeccCChhhEEEccCCCEEEeccCcceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCc
Confidence            78999999999999999999999999877643322  1222367789999999888889999999999999999999888


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       206 ~~~~  209 (287)
T cd07838         206 FRGT  209 (287)
T ss_pred             ccCC
Confidence            8643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.60  E-value=2.3e-16  Score=122.48  Aligned_cols=88  Identities=31%  Similarity=0.406  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEeCC---C--CcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDE---F--WTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~---~--~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~e   74 (137)
                      |+|||+||+|||+..   +  ..++|+|||+++.+.......  .....||.+|.|||.+....-+.++|++|+||++++
T Consensus       627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyY  706 (903)
T KOG1027|consen  627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYY  706 (903)
T ss_pred             cccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEE
Confidence            799999999999975   2  457999999999886554432  234568999999999988777789999999999998


Q ss_pred             HHhc-ccchhhhhcch
Q 042492           75 IEIV-LINWAYKCFID   89 (137)
Q Consensus        75 l~~~-~~~~~~~~~~~   89 (137)
                      .+++ .+||......+
T Consensus       707 vltgG~HpFGd~~~R~  722 (903)
T KOG1027|consen  707 VLTGGSHPFGDSLERQ  722 (903)
T ss_pred             EecCCccCCCchHHhh
Confidence            7665 79998665443

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.59  E-value=8.5e-16  Score=111.41  Aligned_cols=84  Identities=30%  Similarity=0.401  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||+||+||+++.++.++++|||+++........   ......++..|++||.+.+ ..++.++|+||+|+++++|.+
T Consensus       128 ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~  207 (334)
T cd07855         128 VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG  207 (334)
T ss_pred             eecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc
Confidence            799999999999999999999999998765332211   1123357889999998755 457889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       208 g~~pf~~~  215 (334)
T cd07855         208 RRQLFPGK  215 (334)
T ss_pred             CCCccCCC
Confidence            99998543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.59  E-value=1.9e-15  Score=105.06  Aligned_cols=82  Identities=33%  Similarity=0.480  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+++.||+++.++.++++|||+++......   .....++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       124 i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  200 (256)
T cd08530         124 ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPP  200 (256)
T ss_pred             cccCCCCcceEEEecCCcEEEeeccchhhhccCC---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999987664331   1223478889999999888888899999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       201 ~~~~~  205 (256)
T cd08530         201 FEARS  205 (256)
T ss_pred             CCCCC
Confidence            86443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.59  E-value=6.8e-16  Score=112.35  Aligned_cols=80  Identities=33%  Similarity=0.382  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++.....    .....++..|++||.+.+ ..++.++|+||+|++++||.+|..
T Consensus       138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~  213 (342)
T cd07879         138 IIHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKT  213 (342)
T ss_pred             cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999998754221    122346778999998865 457889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       214 pf~~~  218 (342)
T cd07879         214 LFKGK  218 (342)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=9.7e-16  Score=107.09  Aligned_cols=79  Identities=30%  Similarity=0.428  Sum_probs=67.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++|+||+++.++.++++|||+++....     .....++..|++||.+.+..++.++|+||+|++++++.+|..|
T Consensus       118 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p  192 (260)
T cd05611         118 IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPP  192 (260)
T ss_pred             eecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCC
Confidence            78999999999999999999999998875432     1223477889999998877788999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       193 ~~~~  196 (260)
T cd05611         193 FHAE  196 (260)
T ss_pred             CCCC
Confidence            9643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.59  E-value=5.3e-16  Score=111.12  Aligned_cols=84  Identities=25%  Similarity=0.335  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCC----CCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCC-CCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDE----FWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~----~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||+++.    ++.+|++|||+++.......  .......++..|+|||.+.+. .++.++|+||+|+++++
T Consensus       129 i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~  208 (316)
T cd07842         129 VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAE  208 (316)
T ss_pred             EeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            799999999999998    89999999999886532222  112233467889999987653 46888999999999999


Q ss_pred             HHhcccchhhh
Q 042492           75 IEIVLINWAYK   85 (137)
Q Consensus        75 l~~~~~~~~~~   85 (137)
                      |.++..||...
T Consensus       209 l~~~~~~~~~~  219 (316)
T cd07842         209 LLTLEPIFKGR  219 (316)
T ss_pred             HHhcCCCCcCC
Confidence            99999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=1.4e-15  Score=107.43  Aligned_cols=83  Identities=28%  Similarity=0.392  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+|||+||+||+++.++.++++|||++......... .....++..|++||.+.     ...++.++|+||+|+++|++.
T Consensus       124 i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~  202 (280)
T cd06611         124 VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK-RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELA  202 (280)
T ss_pred             cccCCCChhhEEECCCCCEEEccCccchhhcccccc-cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHH
Confidence            689999999999999999999999987654322221 22334788999999874     344677899999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       203 ~g~~p~~~~  211 (280)
T cd06611         203 QMEPPHHEL  211 (280)
T ss_pred             hCCCCcccC
Confidence            999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.59  E-value=3.7e-16  Score=117.90  Aligned_cols=83  Identities=28%  Similarity=0.434  Sum_probs=72.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||||.+|++|+.+..+||+|||++..+..  .......+|++.|.|||+..+..+ ...+|+||+|+++|.+..|.+
T Consensus       176 ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~--~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsL  253 (596)
T KOG0586|consen  176 IVHRDLKAENILLDENMNIKIADFGFSTFFDY--GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSL  253 (596)
T ss_pred             eeccccchhhcccccccceeeeccccceeecc--cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccc
Confidence            79999999999999999999999999988753  223455679999999999988777 567999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       254 PFDG~~  259 (596)
T KOG0586|consen  254 PFDGQN  259 (596)
T ss_pred             ccCCcc
Confidence            997544

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.59  E-value=1e-15  Score=110.60  Aligned_cols=84  Identities=31%  Similarity=0.428  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|||+||.||+++.++.++++|||.+........  .......++..|++||.+.+. .++.++|+||+|+++++|.+|
T Consensus       124 i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g  203 (330)
T cd07834         124 VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR  203 (330)
T ss_pred             eecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcC
Confidence            78999999999999999999999999887643321  112234578889999998877 678899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       204 ~~pf~~~  210 (330)
T cd07834         204 KPLFPGR  210 (330)
T ss_pred             CCCcCCC
Confidence            9998644

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.59  E-value=1.1e-15  Score=111.38  Aligned_cols=79  Identities=32%  Similarity=0.398  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++.....    .....++..|++||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~  216 (345)
T cd07877         141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT  216 (345)
T ss_pred             eeecCCChHHEEEcCCCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999998754221    123347888999998765 457889999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       217 pf~~  220 (345)
T cd07877         217 LFPG  220 (345)
T ss_pred             CCCC
Confidence            9854

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=1.7e-15  Score=105.08  Aligned_cols=83  Identities=28%  Similarity=0.328  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||++|+||+++.++.++++|||.+......... .....++..|++||...+...+.++|+|++|++++++.++..|
T Consensus       120 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p  198 (254)
T cd06627         120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP  198 (254)
T ss_pred             cccCCCCHHHEEECCCCCEEEeccccceecCCCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence            789999999999999999999999999876433321 1233478889999998877788899999999999999999998


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       199 ~~~~  202 (254)
T cd06627         199 YYDL  202 (254)
T ss_pred             CCCc
Confidence            8643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.59  E-value=9.9e-16  Score=108.22  Aligned_cols=83  Identities=29%  Similarity=0.413  Sum_probs=66.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|+||+||+++.++.++++|||++...............++..|++||.+.+. .++.++|+||+|++++++.++..
T Consensus       120 i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~  199 (286)
T cd07832         120 IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSP  199 (286)
T ss_pred             eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCc
Confidence            78999999999999999999999999876643322222334578899999987654 35889999999999999999977


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      +|..
T Consensus       200 ~~~~  203 (286)
T cd07832         200 LFPG  203 (286)
T ss_pred             CcCC
Confidence            6643

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.59  E-value=8.7e-16  Score=123.14  Aligned_cols=74  Identities=41%  Similarity=0.618  Sum_probs=61.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecC-----------------CCCcceeeecccccceecccccCCCC---CCc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLM-----------------PDQTRTFTLIRGTRGYMAPEWSKNTP---ISV   61 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~-----------------~~~~~~~~~~~~~~~~~ape~~~~~~---~~~   61 (137)
                      |||||+||.||+++.+..+||.|||++....                 .......+..+||.-|+|||.+.+..   |+.
T Consensus       718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~  797 (1351)
T KOG1035|consen  718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS  797 (1351)
T ss_pred             eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence            7999999999999999999999999997621                 00111234567999999999987554   899


Q ss_pred             ccceeeHHHHHHHH
Q 042492           62 KANVFNYGVVLLEI   75 (137)
Q Consensus        62 ~~dv~s~G~~l~el   75 (137)
                      |+|+||+|++++||
T Consensus       798 KiDmYSLGIVlFEM  811 (1351)
T KOG1035|consen  798 KIDMYSLGIVLFEM  811 (1351)
T ss_pred             hhhhHHHHHHHHHH
Confidence            99999999999999

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.59  E-value=1.1e-15  Score=105.86  Aligned_cols=78  Identities=19%  Similarity=0.192  Sum_probs=64.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+|||+||+||+++.++.++++|||.+......    .....++..|++||...+..++.++|+||+|++++|+.+|..+
T Consensus       106 i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~  181 (237)
T cd05576         106 IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTL  181 (237)
T ss_pred             eeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcch
Confidence            799999999999999999999999987654321    1122356679999998877788999999999999999999877


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      +.
T Consensus       182 ~~  183 (237)
T cd05576         182 VE  183 (237)
T ss_pred             hh
Confidence            64

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.59  E-value=3e-16  Score=117.70  Aligned_cols=89  Identities=26%  Similarity=0.449  Sum_probs=73.5

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+|.|+||+|+|+...   -.+|+||||++|...+..-  .....||+.|+|||++.+..|+..-|+||.|+++|--+.|
T Consensus       685 IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSG  762 (888)
T KOG4236|consen  685 IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSG  762 (888)
T ss_pred             eeeccCCchheeeccCCCCCceeeccccceeecchhhh--hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecc
Confidence            7999999999999743   3579999999998865443  2356799999999999999999999999999999988899


Q ss_pred             ccchhhhhcchhhh
Q 042492           79 LINWAYKCFIDREF   92 (137)
Q Consensus        79 ~~~~~~~~~~~~~~   92 (137)
                      ..||......++.+
T Consensus       763 TFPFNEdEdIndQI  776 (888)
T KOG4236|consen  763 TFPFNEDEDINDQI  776 (888)
T ss_pred             cccCCCccchhHHh
Confidence            99997654444434

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.58  E-value=1.4e-15  Score=108.08  Aligned_cols=82  Identities=27%  Similarity=0.349  Sum_probs=65.6

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||+|++||+++. ++.++++|||+++....... ......+++.|+|||.+.+ ..++.++|+||+|+++++|.+|.
T Consensus       131 i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~  209 (295)
T cd07837         131 VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ  209 (295)
T ss_pred             eeecCCChHHEEEecCCCeEEEeecccceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC
Confidence            799999999999998 88999999999876532211 1122246778999998764 44688999999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       210 ~~~~~  214 (295)
T cd07837         210 PLFPG  214 (295)
T ss_pred             CCCCC
Confidence            98864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.58  E-value=9.9e-16  Score=109.80  Aligned_cols=83  Identities=30%  Similarity=0.299  Sum_probs=66.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++||||||+||+++.++.++++|||+++....... ......++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       129 i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~  207 (309)
T cd07845         129 IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP  207 (309)
T ss_pred             eecCCCCHHHEEECCCCCEEECccceeeecCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999886643221 1122235678999998865 446889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       208 ~f~~~  212 (309)
T cd07845         208 LLPGK  212 (309)
T ss_pred             CCCCC
Confidence            88643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.58  E-value=2.4e-15  Score=105.37  Aligned_cols=84  Identities=31%  Similarity=0.478  Sum_probs=67.5

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcce---eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRT---FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ++||||++.||+++.++ .++++|||.+..........   .....++..|++||.+.+..++.++|+||+|++++++.+
T Consensus       124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~  203 (268)
T cd06630         124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT  203 (268)
T ss_pred             eecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh
Confidence            78999999999998765 58999999987654322111   112347889999999988788899999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       204 g~~p~~~~  211 (268)
T cd06630         204 AKPPWNAE  211 (268)
T ss_pred             CCCCCCCC
Confidence            99998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.58  E-value=2.4e-15  Score=106.34  Aligned_cols=80  Identities=23%  Similarity=0.300  Sum_probs=60.9

Q ss_pred             CeEecCCCCCCEEeCCCC-------cEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFW-------TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l   72 (137)
                      .|+||||||+||+++..+       .++++|||++.......     ...++..|++||.+.+ ..++.++|+||||+++
T Consensus       137 ~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~-----~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l  211 (274)
T cd05076         137 NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE-----ERVERIPWIAPECVPGGNSLSTAADKWSFGTTL  211 (274)
T ss_pred             CccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc-----ccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence            479999999999997533       37999999876432211     1236778999998865 4578899999999999


Q ss_pred             HHHH-hcccchhhh
Q 042492           73 LEIE-IVLINWAYK   85 (137)
Q Consensus        73 ~el~-~~~~~~~~~   85 (137)
                      ||+. .+..||...
T Consensus       212 ~el~~~g~~p~~~~  225 (274)
T cd05076         212 LEICFDGEVPLKER  225 (274)
T ss_pred             HHHHhCCCCCcccc
Confidence            9984 577887643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.58  E-value=1.6e-15  Score=107.85  Aligned_cols=83  Identities=28%  Similarity=0.343  Sum_probs=67.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++||||||+||+++.++.++++|||+++....... ......++..|++||.+.+.. ++.++|+||+|+++++|.+|..
T Consensus       127 i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  205 (293)
T cd07843         127 ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP  205 (293)
T ss_pred             eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999886643321 122234678899999886543 5788999999999999999998


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       206 ~f~~~  210 (293)
T cd07843         206 LFPGK  210 (293)
T ss_pred             CCCCC
Confidence            88643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.58  E-value=1.6e-15  Score=106.96  Aligned_cols=81  Identities=31%  Similarity=0.429  Sum_probs=65.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+||+||+++. +.++++|||+++.......  .....++..|++||.... ..++.++|+||+|++++||.++..
T Consensus       121 i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~  197 (282)
T cd07831         121 IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFP  197 (282)
T ss_pred             ceecccCHHHEEEcC-CCeEEEecccccccccCCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCc
Confidence            799999999999999 9999999999876532221  122347889999997643 446889999999999999999988


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       198 p~~~~  202 (282)
T cd07831         198 LFPGT  202 (282)
T ss_pred             CCCCC
Confidence            88643

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.58  E-value=1.4e-15  Score=105.80  Aligned_cols=83  Identities=31%  Similarity=0.478  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|+||+||+++.++ .++++|||.+........ ......|+..|++||...+..++.++|+||+|++++++.++..
T Consensus       122 i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~  200 (257)
T cd08225         122 ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKH  200 (257)
T ss_pred             cccccCCHHHEEEcCCCCeEEecccccchhccCCcc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            68999999999998775 469999998876543222 1223347888999999888888899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       201 p~~~~  205 (257)
T cd08225         201 PFEGN  205 (257)
T ss_pred             CCCCc
Confidence            98643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.58  E-value=2.5e-15  Score=104.09  Aligned_cols=85  Identities=33%  Similarity=0.425  Sum_probs=70.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|++|+||+++.++.++++|||.+......... ......++..|.+||.......+.++|+||+|++++++.+|..
T Consensus       122 ~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~  201 (260)
T cd06606         122 IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP  201 (260)
T ss_pred             ccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999998876443321 1223457889999999988778899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       202 p~~~~~  207 (260)
T cd06606         202 PWSELG  207 (260)
T ss_pred             CCCCCC
Confidence            997554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.58  E-value=1.4e-15  Score=110.53  Aligned_cols=82  Identities=29%  Similarity=0.374  Sum_probs=66.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++...... .......++..|++||.+.. ..++.++|+||+|+++++|.+|..
T Consensus       129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  207 (337)
T cd07858         129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP  207 (337)
T ss_pred             EecCCCCHHHEEEcCCCCEEECcCccccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999987653321 11223347788999998754 457889999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       208 pf~~  211 (337)
T cd07858         208 LFPG  211 (337)
T ss_pred             CCCC
Confidence            9854

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.57  E-value=1.5e-15  Score=108.37  Aligned_cols=83  Identities=25%  Similarity=0.396  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++|+||+++.++.++++|||++........ ......++..|++||...+..++.++|+||+|++++++.+|..|
T Consensus       137 ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p  215 (292)
T cd06657         137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  215 (292)
T ss_pred             eecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999998875532221 12234478899999998887888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       216 ~~~~  219 (292)
T cd06657         216 YFNE  219 (292)
T ss_pred             CCCC
Confidence            8643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.57  E-value=1.3e-15  Score=107.63  Aligned_cols=83  Identities=28%  Similarity=0.386  Sum_probs=66.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||++|+||+++.++.++++|||+++...... .......++..|++||...+.. ++.++|+||+|++++++.+|..
T Consensus       121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~  199 (284)
T cd07860         121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA  199 (284)
T ss_pred             eecCCCCHHHEEECCCCCEEEeeccchhhcccCc-cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            7899999999999999999999999987543221 1122234677899999876544 5788999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 p~~~~  204 (284)
T cd07860         200 LFPGD  204 (284)
T ss_pred             CCCCC
Confidence            98644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.57  E-value=2.9e-15  Score=103.91  Aligned_cols=83  Identities=31%  Similarity=0.539  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++++||+++.++.++++|||.+........ ......++..|++||...+..++.++|+||+|++++++..+..|
T Consensus       124 ~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p  202 (258)
T cd08215         124 ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP  202 (258)
T ss_pred             EecccCChHHeEEcCCCcEEECCccceeecccCcc-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999876644321 12233578889999998888888999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       203 ~~~~  206 (258)
T cd08215         203 FEGE  206 (258)
T ss_pred             CCCC
Confidence            8644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.57  E-value=1.3e-15  Score=108.82  Aligned_cols=83  Identities=31%  Similarity=0.366  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----------ceeeecccccceecccccCCC-CCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----------RTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~   70 (137)
                      |+|||+||+||+++.++.++++|||+++.......          ...+...++..|++||.+.+. .++.++|+||+|+
T Consensus       136 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  215 (311)
T cd07866         136 ILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC  215 (311)
T ss_pred             eecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHH
Confidence            78999999999999999999999999875532211          111223467789999987543 4688999999999


Q ss_pred             HHHHHHhcccchhh
Q 042492           71 VLLEIEIVLINWAY   84 (137)
Q Consensus        71 ~l~el~~~~~~~~~   84 (137)
                      ++++|.+|..+|..
T Consensus       216 il~el~~g~~~~~~  229 (311)
T cd07866         216 VFAEMFTRRPILQG  229 (311)
T ss_pred             HHHHHHhCCCCCCC
Confidence            99999999988854

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.57  E-value=1.6e-15  Score=107.06  Aligned_cols=84  Identities=27%  Similarity=0.320  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|++|+||+++.++.++++|||.+...............++..|++||.+.+ ..++.++|+||||++++++.++..
T Consensus       121 ~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~  200 (287)
T cd07840         121 ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKP  200 (287)
T ss_pred             ceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999988764433222233346778999997654 456889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       201 p~~~~  205 (287)
T cd07840         201 IFQGS  205 (287)
T ss_pred             CCCCC
Confidence            88643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.57  E-value=4.7e-15  Score=106.72  Aligned_cols=79  Identities=32%  Similarity=0.368  Sum_probs=65.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|||++|+||+++.++.++++|||++......     ....++..|++||.+.   ...++.++|+||+|+++++|.+|
T Consensus       142 i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g  216 (313)
T cd06633         142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  216 (313)
T ss_pred             eecCCCChhhEEECCCCCEEEeecCCCcccCCC-----CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhC
Confidence            789999999999999999999999987643211     2234788899999874   35578889999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       217 ~~p~~~~  223 (313)
T cd06633         217 KPPLFNM  223 (313)
T ss_pred             CCCCCCC
Confidence            9988643

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.57  E-value=2.7e-15  Score=107.62  Aligned_cols=85  Identities=14%  Similarity=0.173  Sum_probs=66.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc------eeeecccccceecccccCC--CCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l   72 (137)
                      .|+|||+|++||+++.++.++++|||.+.........      ......++..|++||.+..  ..++.++|+||+|+++
T Consensus       121 ~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il  200 (314)
T cd08216         121 GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITA  200 (314)
T ss_pred             CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHH
Confidence            4799999999999999999999999988654321110      1122336678999998865  3477899999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      +|+.+|..||...
T Consensus       201 ~el~~g~~pf~~~  213 (314)
T cd08216         201 CELANGHVPFKDM  213 (314)
T ss_pred             HHHHhCCCCCCCC
Confidence            9999999999743

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.57  E-value=1.6e-15  Score=107.31  Aligned_cols=82  Identities=30%  Similarity=0.397  Sum_probs=66.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||++|+||+++.++.++++|||++....... .......++..|++||...+. .++.++|+||||+++++|.+|..
T Consensus       121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~  199 (286)
T cd07846         121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEP  199 (286)
T ss_pred             ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999987653332 222334578889999988653 46788999999999999999988


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      +|..
T Consensus       200 ~~~~  203 (286)
T cd07846         200 LFPG  203 (286)
T ss_pred             CCCC
Confidence            8753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.57  E-value=2e-15  Score=106.43  Aligned_cols=83  Identities=30%  Similarity=0.407  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|+|+||+||+++.++.++++|||.+....... .......++..|++||.+.+. ..+.++|+||+|++++++.+|..
T Consensus       119 i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~  197 (283)
T cd05118         119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRP  197 (283)
T ss_pred             eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999987664332 122233477889999988766 67889999999999999999998


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      +|...
T Consensus       198 ~~~~~  202 (283)
T cd05118         198 LFPGK  202 (283)
T ss_pred             CCCCC
Confidence            88543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.57  E-value=1.9e-15  Score=109.30  Aligned_cols=83  Identities=13%  Similarity=0.182  Sum_probs=63.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce------eeecccccceecccccCC--CCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT------FTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~   73 (137)
                      |+|||+||+||+++.++.+++.||+............      .....++..|+|||++.+  ..++.++|+||+|++++
T Consensus       122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~  201 (327)
T cd08227         122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  201 (327)
T ss_pred             EecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHH
Confidence            7999999999999999999999997644321111100      011235667999999865  35788999999999999


Q ss_pred             HHHhcccchhh
Q 042492           74 EIEIVLINWAY   84 (137)
Q Consensus        74 el~~~~~~~~~   84 (137)
                      |+.+|..||..
T Consensus       202 el~~g~~pf~~  212 (327)
T cd08227         202 ELANGHVPFKD  212 (327)
T ss_pred             HHHHCCCCCCC
Confidence            99999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.57  E-value=2e-15  Score=107.73  Aligned_cols=84  Identities=24%  Similarity=0.261  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~   77 (137)
                      ++|||+||+||+++.++.++++|||++.........   ......++..|+|||.+.+.. ++.++|+||+|+++++|.+
T Consensus       140 i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t  219 (310)
T cd07865         140 ILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT  219 (310)
T ss_pred             eeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHh
Confidence            789999999999999999999999998765322111   112234677899999876543 6788999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      +..+|...
T Consensus       220 ~~~~~~~~  227 (310)
T cd07865         220 RSPIMQGN  227 (310)
T ss_pred             CCCCCCCC
Confidence            98888543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.56  E-value=5.7e-15  Score=102.39  Aligned_cols=84  Identities=32%  Similarity=0.393  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|++|.||+++.++.++++|||.+........ ......++..|++||...+...+.++|+||+|++++++.+|..|
T Consensus       114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p  192 (250)
T cd05123         114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS-RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP  192 (250)
T ss_pred             ceecCCCcceEEEcCCCcEEEeecCcceecccCCC-cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            68999999999999999999999999876533221 12234477889999999877788899999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       193 ~~~~~  197 (250)
T cd05123         193 FYAED  197 (250)
T ss_pred             CCCCC
Confidence            96443

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.56  E-value=5e-15  Score=105.15  Aligned_cols=81  Identities=36%  Similarity=0.557  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+++.||+++.++.++++|||++........   ....++..|++||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       126 i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  202 (287)
T cd06621         126 IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFP  202 (287)
T ss_pred             cccCCCCHHHEEEecCCeEEEeecccccccccccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999875432221   123467789999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       203 ~~~~  206 (287)
T cd06621         203 FPPE  206 (287)
T ss_pred             CCcc
Confidence            9755

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.56  E-value=8.6e-16  Score=114.85  Aligned_cols=82  Identities=30%  Similarity=0.408  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|.||||.|||+..+. ..||||||.+-....+   ..+.+.-+..|.|||++.+.+|++..|+||.||.+|||.+|.+
T Consensus       557 vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI  633 (752)
T KOG0670|consen  557 VLHADIKPDNILVNESKNILKLCDFGSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI  633 (752)
T ss_pred             eeecccCccceEeccCcceeeeccCccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce
Confidence            79999999999998654 5699999988654322   2344556778999999999999999999999999999988888


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      .|....
T Consensus       634 lFpG~T  639 (752)
T KOG0670|consen  634 LFPGRT  639 (752)
T ss_pred             ecCCCC
Confidence            886543

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.56  E-value=2.5e-15  Score=107.11  Aligned_cols=84  Identities=29%  Similarity=0.335  Sum_probs=66.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+|||+|++||+++.++.+|++|||++...............++..|++||.+.+ ..++.++|+||+|++++++.+|.
T Consensus       136 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~  215 (302)
T cd07864         136 NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK  215 (302)
T ss_pred             CeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence            37999999999999999999999999987654332222222235678999997754 34678999999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       216 ~~~~~  220 (302)
T cd07864         216 PIFQA  220 (302)
T ss_pred             CCCCC
Confidence            88864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.55  E-value=3.1e-15  Score=106.37  Aligned_cols=84  Identities=30%  Similarity=0.383  Sum_probs=65.3

Q ss_pred             CeEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .++|||++|+||+++. ++.+|++|||+++...... .......++..|++||.+.+. .++.++|+||+|+++++|.+|
T Consensus       122 ~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg  200 (294)
T PLN00009        122 RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQ  200 (294)
T ss_pred             CeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            3799999999999985 5578999999987543221 112233467889999987653 468899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       201 ~~pf~~~  207 (294)
T PLN00009        201 KPLFPGD  207 (294)
T ss_pred             CCCCCCC
Confidence            9998643

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.55  E-value=2.9e-15  Score=105.85  Aligned_cols=83  Identities=29%  Similarity=0.386  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||++|+||+++.++.++++|||+++...... .......++..|++||.+.+. .++.++|+||+|++++++.+|..
T Consensus       120 ~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  198 (283)
T cd07835         120 VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRP  198 (283)
T ss_pred             eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999987543221 111222467889999987654 46888999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       199 pf~~~  203 (283)
T cd07835         199 LFPGD  203 (283)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.55  E-value=4.4e-15  Score=104.42  Aligned_cols=85  Identities=33%  Similarity=0.562  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-------------------ceeeecccccceecccccCCCCCCcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-------------------RTFTLIRGTRGYMAPEWSKNTPISVK   62 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------------------~~~~~~~~~~~~~ape~~~~~~~~~~   62 (137)
                      ++|+|++++||+++.++.++++|||++........                   .......++..|++||.......+.+
T Consensus       123 ~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~  202 (280)
T cd05581         123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKS  202 (280)
T ss_pred             eeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChh
Confidence            68999999999999999999999999876533221                   11122346788999999888778889


Q ss_pred             cceeeHHHHHHHHHhcccchhhhh
Q 042492           63 ANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        63 ~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      +|+||+|++++++.+|..||....
T Consensus       203 ~Di~slG~~l~~l~~g~~p~~~~~  226 (280)
T cd05581         203 SDLWALGCIIYQMLTGKPPFRGSN  226 (280)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCcc
Confidence            999999999999999999987543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.55  E-value=4.2e-15  Score=105.86  Aligned_cols=82  Identities=28%  Similarity=0.383  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|+||||+||+++.++.++++|||+++........ .....++..|++||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       123 i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~  201 (298)
T cd07841         123 ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVP  201 (298)
T ss_pred             eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999998866432221 122236778999998754 456888999999999999999976


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      +|..
T Consensus       202 ~~~~  205 (298)
T cd07841         202 FLPG  205 (298)
T ss_pred             cccC
Confidence            6643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.54  E-value=6.5e-15  Score=103.78  Aligned_cols=83  Identities=29%  Similarity=0.353  Sum_probs=67.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||++++||+++.++.++++|||+++....... ......++..|++||.+.+. .++.++|+||+|++++|+.++..
T Consensus       119 i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~  197 (282)
T cd07829         119 ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKP  197 (282)
T ss_pred             cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999876533221 12223356789999988765 67889999999999999999988


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      +|...
T Consensus       198 ~~~~~  202 (282)
T cd07829         198 LFPGD  202 (282)
T ss_pred             CCCCc
Confidence            88654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.54  E-value=1.1e-14  Score=102.79  Aligned_cols=82  Identities=29%  Similarity=0.413  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-CCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-NTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|+++.||+++.++.++++|||+++.......  .....++..|++||.+. ...++.++|+||||++++++.++..
T Consensus       120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~  197 (283)
T cd07830         120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRP  197 (283)
T ss_pred             cccCCCChhhEEEcCCCCEEEeecccceeccCCCC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCC
Confidence            68999999999999999999999999876533221  22345788899999774 3446889999999999999999988


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      +|...
T Consensus       198 ~~~~~  202 (283)
T cd07830         198 LFPGS  202 (283)
T ss_pred             ccCCC
Confidence            88543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.53  E-value=3.9e-15  Score=105.16  Aligned_cols=84  Identities=25%  Similarity=0.341  Sum_probs=66.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|||+||+||+++.++.++++|||+++...... .......++..|++||.+.+. .++.++|+||+|++++++.+|..
T Consensus       121 i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~  199 (284)
T cd07836         121 VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRP  199 (284)
T ss_pred             eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999987543221 111223467889999987653 46788999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       200 ~~~~~~  205 (284)
T cd07836         200 LFPGTN  205 (284)
T ss_pred             CCCCCC
Confidence            986543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.53  E-value=4.2e-15  Score=108.27  Aligned_cols=80  Identities=33%  Similarity=0.399  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||++......    .....++..|++||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       139 i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~  214 (343)
T cd07851         139 IIHRDLKPSNIAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKT  214 (343)
T ss_pred             eecCCCCHHHeEECCCCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999998765322    123347788999998754 356789999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       215 pf~~~  219 (343)
T cd07851         215 LFPGS  219 (343)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.53  E-value=1.5e-14  Score=101.03  Aligned_cols=81  Identities=32%  Similarity=0.498  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+|++|++++. +.++++|||+++....... ......++..|++||...+..++.++|+||+|++++++.++..|
T Consensus       127 i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~  204 (260)
T cd08222         127 ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA  204 (260)
T ss_pred             ccccCCChhheEeec-CCEeecccCceeecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            689999999999975 4699999999876533222 12233477889999998877788899999999999999999988


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       205 ~~~  207 (260)
T cd08222         205 FEG  207 (260)
T ss_pred             CCC
Confidence            854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.52  E-value=1.1e-14  Score=99.76  Aligned_cols=81  Identities=40%  Similarity=0.537  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|+|+++.||+++.++.++++|||.+.......  ......++..|++||......++.++|+|++|++++++.++..|
T Consensus       108 i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p  185 (244)
T smart00220      108 IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPP  185 (244)
T ss_pred             eecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999988764332  12234477889999999877888899999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       186 ~~~  188 (244)
T smart00220      186 FPG  188 (244)
T ss_pred             CCC
Confidence            865

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.52  E-value=7.7e-15  Score=106.94  Aligned_cols=80  Identities=31%  Similarity=0.366  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||+||+||+++.++.++++|||+++.....    .....++..|++||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       139 i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~  214 (343)
T cd07880         139 IIHRDLKPGNLAVNEDCELKILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP  214 (343)
T ss_pred             eecCCCCHHHEEEcCCCCEEEeecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999998754221    122346788999998865 347888999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       215 pf~~~  219 (343)
T cd07880         215 LFKGH  219 (343)
T ss_pred             CCCCC
Confidence            98643

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.51  E-value=7.4e-15  Score=106.92  Aligned_cols=83  Identities=23%  Similarity=0.359  Sum_probs=63.8

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcce--eeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+|||+|++||+++. ++.++++|||.++.........  .....++..|+|||.+.. ..++.++|+||+|+++++|.+
T Consensus       135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~  214 (342)
T cd07854         135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT  214 (342)
T ss_pred             cccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh
Confidence            789999999999974 5678999999987653221111  112246778999997654 456788999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       215 g~~pf~~  221 (342)
T cd07854         215 GKPLFAG  221 (342)
T ss_pred             CCCCCCC
Confidence            9999954

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.51  E-value=1.2e-14  Score=103.48  Aligned_cols=88  Identities=28%  Similarity=0.383  Sum_probs=65.3

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCC------cceeeecccccceecccccC-----CCCCCcccceee
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQ------TRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~------~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s   67 (137)
                      |.|||+||+|||-.....   +||+||.+........      +....+.+|+-.|||||+..     ...|+.++|.||
T Consensus       197 IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwS  276 (463)
T KOG0607|consen  197 IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWS  276 (463)
T ss_pred             cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHH
Confidence            689999999999975433   5999997765432111      11112345888999999763     334788999999


Q ss_pred             HHHHHHHHHhcccchhhhhcch
Q 042492           68 YGVVLLEIEIVLINWAYKCFID   89 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~~~~~~   89 (137)
                      +|+++|-|+.|..||...+..+
T Consensus       277 LGvIlYImLsGYpPFvG~Cg~d  298 (463)
T KOG0607|consen  277 LGVILYIMLSGYPPFVGHCGAD  298 (463)
T ss_pred             HHHHHHHHHhCCCCccCccCCc
Confidence            9999999999999998876443

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.51  E-value=1e-14  Score=105.68  Aligned_cols=84  Identities=24%  Similarity=0.286  Sum_probs=66.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-------------cceeeecccccceecccccCCC-CCCcccceee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-------------TRTFTLIRGTRGYMAPEWSKNT-PISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s   67 (137)
                      |+||||+++||+++.++.++++|||.++......             ........++..|++||.+.+. .++.++|+||
T Consensus       140 i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s  219 (335)
T PTZ00024        140 FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS  219 (335)
T ss_pred             eecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHH
Confidence            7999999999999999999999999987654111             1111122357789999988654 3588999999


Q ss_pred             HHHHHHHHHhcccchhhh
Q 042492           68 YGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~~   85 (137)
                      +|++++++.+|..||...
T Consensus       220 lG~~l~el~tg~~p~~~~  237 (335)
T PTZ00024        220 VGCIFAELLTGKPLFPGE  237 (335)
T ss_pred             HHHHHHHHHhCCCCCCCC
Confidence            999999999999998644

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.50  E-value=1.4e-14  Score=104.98  Aligned_cols=79  Identities=33%  Similarity=0.471  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+|||++|+|++++.++.++++|||.++.....    .....++..|++||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~  204 (328)
T cd07856         129 VVHRDLKPSNILINENCDLKICDFGLARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKP  204 (328)
T ss_pred             cccCCCCHHHEeECCCCCEEeCccccccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999998754221    122346778999998765 457889999999999999999998


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       205 ~f~~  208 (328)
T cd07856         205 LFPG  208 (328)
T ss_pred             CCCC
Confidence            8854

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.50  E-value=4.3e-14  Score=107.67  Aligned_cols=82  Identities=26%  Similarity=0.233  Sum_probs=60.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC--------------------C--
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP--------------------I--   59 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--------------------~--   59 (137)
                      |+|||+||+||+++.++.++++|||+++..............+++.|++||.+....                    +  
T Consensus       330 ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~  409 (507)
T PLN03224        330 IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGR  409 (507)
T ss_pred             eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCC
Confidence            799999999999999999999999998754322211111223478999999875322                    1  


Q ss_pred             CcccceeeHHHHHHHHHhccc-chh
Q 042492           60 SVKANVFNYGVVLLEIEIVLI-NWA   83 (137)
Q Consensus        60 ~~~~dv~s~G~~l~el~~~~~-~~~   83 (137)
                      ..+.|+||+||++++|.++.. |+.
T Consensus       410 ~~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        410 PDLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             CCccchhhHHHHHHHHHhCCCCCcc
Confidence            124699999999999988764 553

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.50  E-value=9e-15  Score=96.93  Aligned_cols=84  Identities=23%  Similarity=0.311  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++|||+||+|+++..+|..|++|||+++-+.-+- .......-|.+|.+|.++.+.+ |+...|+||.||++.|+.. |.
T Consensus       122 vlhrdlkpqnllin~ngelkladfglarafgipv-rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagr  200 (292)
T KOG0662|consen  122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR  200 (292)
T ss_pred             hhhccCCcceEEeccCCcEEecccchhhhcCCce-EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCC
Confidence            5799999999999999999999999998764322 1223344688999999887655 6888999999999999954 34


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .-|....
T Consensus       201 plfpg~d  207 (292)
T KOG0662|consen  201 PLFPGND  207 (292)
T ss_pred             CCCCCCc
Confidence            4444433

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.50  E-value=7.8e-15  Score=110.80  Aligned_cols=79  Identities=29%  Similarity=0.402  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcc-cceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK-ANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~dv~s~G~~l~el~~~~~   80 (137)
                      |||||||-+|++++.+|-+|++|||.+....++.   .....||..|.|||++.+.+|-.| .|||++|+++|.+.....
T Consensus       691 ivhrdikdenvivd~~g~~klidfgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken  767 (772)
T KOG1152|consen  691 IVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN  767 (772)
T ss_pred             ceecccccccEEEecCCeEEEeeccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence            7999999999999999999999999886543322   344569999999999999988544 899999999999887777


Q ss_pred             chh
Q 042492           81 NWA   83 (137)
Q Consensus        81 ~~~   83 (137)
                      ||.
T Consensus       768 pyy  770 (772)
T KOG1152|consen  768 PYY  770 (772)
T ss_pred             CCc
Confidence            765

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.49  E-value=1.5e-14  Score=104.63  Aligned_cols=84  Identities=17%  Similarity=0.247  Sum_probs=62.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-cc--e---eeecccccceecccccCCC--CCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TR--T---FTLIRGTRGYMAPEWSKNT--PISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~--~---~~~~~~~~~~~ape~~~~~--~~~~~~dv~s~G~~l~   73 (137)
                      |+|||+||+||+++.++.+++.||+......... ..  .   .....++..|++||.+.+.  .++.++|+||+|++++
T Consensus       122 ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~  201 (328)
T cd08226         122 YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITAC  201 (328)
T ss_pred             eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence            7999999999999999999999997543221111 00  0   0111245679999998653  4678999999999999


Q ss_pred             HHHhcccchhhh
Q 042492           74 EIEIVLINWAYK   85 (137)
Q Consensus        74 el~~~~~~~~~~   85 (137)
                      ++.+|..||...
T Consensus       202 el~~g~~p~~~~  213 (328)
T cd08226         202 ELATGRVPFQDM  213 (328)
T ss_pred             HHHhCCCCCCCc
Confidence            999999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.48  E-value=1.9e-14  Score=104.67  Aligned_cols=114  Identities=21%  Similarity=0.258  Sum_probs=87.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |||.||..+|.++++.-.+|++|=.++|-+.+...+.. ...-....||++|.+.+..|+.++|+||||+++|||++ |.
T Consensus       417 ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~  496 (563)
T KOG1024|consen  417 VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGK  496 (563)
T ss_pred             cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCC
Confidence            79999999999999999999999999997765544321 12224568999999999999999999999999999976 56


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .|++.-. ..+-...+.|+  -..+..++.++..++..|
T Consensus       497 ~PyaeID-PfEm~~ylkdGyRlaQP~NCPDeLf~vMacC  534 (563)
T KOG1024|consen  497 LPYAEID-PFEMEHYLKDGYRLAQPFNCPDELFTVMACC  534 (563)
T ss_pred             CCccccC-HHHHHHHHhccceecCCCCCcHHHHHHHHHH
Confidence            7776432 22222333444  345667778889999999

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.46  E-value=6.5e-14  Score=95.28  Aligned_cols=83  Identities=30%  Similarity=0.467  Sum_probs=68.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc-CCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS-KNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~-~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ++|+|+++.|++++.++.++++|||.+...............++..|++||.. ....++.++|+|++|++++++.+|..
T Consensus       119 i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~  198 (225)
T smart00221      119 IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPE  198 (225)
T ss_pred             eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            68999999999999999999999999887644321112233467789999988 66667789999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       199 pf~~  202 (225)
T smart00221      199 PFSG  202 (225)
T ss_pred             Cccc
Confidence            9965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.43  E-value=8.5e-14  Score=95.31  Aligned_cols=84  Identities=23%  Similarity=0.401  Sum_probs=66.5

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||+||.|++++ .....+++|+|++...-+...-+  -...+..|.-||.+... .++..-|+|||||++..|.+..
T Consensus       153 ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrk  230 (338)
T KOG0668|consen  153 IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  230 (338)
T ss_pred             cccccCCcceeeechhhceeeeeecchHhhcCCCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhcc
Confidence            78999999999999 46778999999998764444322  23467788999988653 4688899999999999998888


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      -||-.+..
T Consensus       231 epFFhG~d  238 (338)
T KOG0668|consen  231 EPFFHGHD  238 (338)
T ss_pred             CcccCCCC
Confidence            88765543

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.39  E-value=3.5e-13  Score=105.49  Aligned_cols=113  Identities=24%  Similarity=0.304  Sum_probs=84.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeee-cccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL-IRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      ++||||-.+|+|+....++|+.|||+++.+......-... ..-.+.|+|-|.+....|++++|||||||++||+++ |.
T Consensus       819 lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa  898 (1177)
T KOG1025|consen  819 LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGA  898 (1177)
T ss_pred             hhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCC
Confidence            5899999999999999999999999999886544332221 112457999999999999999999999999999865 67


Q ss_pred             cchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C  116 (137)
                      .|+.....  +++.+.+..   -..+.-...++.-+.+.|
T Consensus       899 ~Py~gi~~--~eI~dlle~geRLsqPpiCtiDVy~~mvkC  936 (1177)
T KOG1025|consen  899 KPYDGIPA--EEIPDLLEKGERLSQPPICTIDVYMVMVKC  936 (1177)
T ss_pred             CccCCCCH--HHhhHHHhccccCCCCCCccHHHHHHHHHH
Confidence            78765443  334444433   234555666677778888

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=7.9e-13  Score=102.68  Aligned_cols=90  Identities=24%  Similarity=0.351  Sum_probs=75.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCCCCCCcc-cceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKNTPISVK-ANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~-~dv~s~G~~l~el~~   77 (137)
                      |.|||+|++|+++..++.+|++|||.+..+.....   .......|+..|+|||.+....|... .|+||.|+++..|..
T Consensus       441 iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~  520 (601)
T KOG0590|consen  441 LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL  520 (601)
T ss_pred             ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec
Confidence            57999999999999999999999999887643322   23345668999999999998888655 999999999999999


Q ss_pred             cccchhhhhcchhh
Q 042492           78 VLINWAYKCFIDRE   91 (137)
Q Consensus        78 ~~~~~~~~~~~~~~   91 (137)
                      +..||......+..
T Consensus       521 ~~~~Wk~a~~~~~~  534 (601)
T KOG0590|consen  521 GRFPWKVAKKSDNS  534 (601)
T ss_pred             CCCccccccccccc
Confidence            99999887765544

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.31  E-value=3.6e-13  Score=94.13  Aligned_cols=87  Identities=23%  Similarity=0.542  Sum_probs=62.4

Q ss_pred             eEecCCCCCCEEeC--CCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCC--CCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTP--ISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~--~~~~~dv~s~G~~l~e   74 (137)
                      ++|||||.+|||+-  +...+|+||||..+.....-..    ..-+..|.+||.+.   ...  .....|+|.||++++.
T Consensus       142 lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~  217 (378)
T KOG1345|consen  142 LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFY  217 (378)
T ss_pred             hhhcccccceEEEecCCccEEEeeecccccccCceehh----hhhhcccCCcHHHhhccccceEecccccchheeeeeee
Confidence            68999999999984  3457899999998764221111    11234577887553   222  3567899999999999


Q ss_pred             HHhcccchhhhhcchhhh
Q 042492           75 IEIVLINWAYKCFIDREF   92 (137)
Q Consensus        75 l~~~~~~~~~~~~~~~~~   92 (137)
                      .++|..||......+..+
T Consensus       218 cltG~~PWQka~~~d~~Y  235 (378)
T KOG1345|consen  218 CLTGKFPWQKASIMDKPY  235 (378)
T ss_pred             eecCCCcchhhhccCchH
Confidence            999999999766665433

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.26  E-value=1.4e-12  Score=97.53  Aligned_cols=76  Identities=36%  Similarity=0.528  Sum_probs=63.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-----cceeeecccccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-----TRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      .+|||+||.||....+...||.|||+........     ....+...||..||+||.+.+..|+.++||||+|++++|+.
T Consensus       377 ~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~  456 (516)
T KOG1033|consen  377 LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELL  456 (516)
T ss_pred             chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHH
Confidence            3699999999999999899999999976653332     11233456999999999999999999999999999999996


Q ss_pred             h
Q 042492           77 I   77 (137)
Q Consensus        77 ~   77 (137)
                      .
T Consensus       457 ~  457 (516)
T KOG1033|consen  457 I  457 (516)
T ss_pred             H
Confidence            5

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.25  E-value=2.1e-12  Score=94.24  Aligned_cols=86  Identities=29%  Similarity=0.391  Sum_probs=64.4

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecC-----------------C--------------------------CCcc
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLM-----------------P--------------------------DQTR   37 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~-----------------~--------------------------~~~~   37 (137)
                      |||||+||.|++.+. .+.-.|.|||++....                 .                          +...
T Consensus       153 IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~  232 (418)
T KOG1167|consen  153 IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPS  232 (418)
T ss_pred             ccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccc
Confidence            799999999999984 4566899999987210                 0                          0000


Q ss_pred             eeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhcccchhhhhc
Q 042492           38 TFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLINWAYKCF   87 (137)
Q Consensus        38 ~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~~~~~~~~   87 (137)
                      ......||++|.|||++...+ -+.+.|+||.|++++-++.+..||.....
T Consensus       233 ~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~d  283 (418)
T KOG1167|consen  233 ERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKD  283 (418)
T ss_pred             eecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCcc
Confidence            011245899999999886544 47889999999999999999999876544

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.23  E-value=6.1e-12  Score=100.57  Aligned_cols=115  Identities=23%  Similarity=0.395  Sum_probs=84.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-c-------------eeeecccccceecccccCCCCCCccccee
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-R-------------TFTLIRGTRGYMAPEWSKNTPISVKANVF   66 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~-------------~~~~~~~~~~~~ape~~~~~~~~~~~dv~   66 (137)
                      .|+|||+|++|.++...|+.|+.|||+++....... .             .....+||+.|.|||++.-..|...+|.|
T Consensus       163 givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdww  242 (1205)
T KOG0606|consen  163 GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWW  242 (1205)
T ss_pred             CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHH
Confidence            489999999999999999999999999875421111 0             01234699999999999888888889999


Q ss_pred             eHHHHHHHHHhcccchhhhhcchhhhhhccCC-------c----cccHHHHHHHHHHHHHh
Q 042492           67 NYGVVLLEIEIVLINWAYKCFIDREFNKLVHD-------E----EVNKKTLENMIKVRLWC  116 (137)
Q Consensus        67 s~G~~l~el~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~l~C  116 (137)
                      ++|++++|...+..||..... ++.+..++..       .    ....+.+.++++-+-+|
T Consensus       243 amGiIlyeFLVgcvpffGdtp-eelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~  302 (1205)
T KOG0606|consen  243 AMGIILYEFLVGCVPFFGDTP-EELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLC  302 (1205)
T ss_pred             HHHHHHHHHheeeeeccCCCH-HHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHh
Confidence            999999999999999875432 2333333322       1    22345566666666666

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.22  E-value=5e-12  Score=96.28  Aligned_cols=76  Identities=28%  Similarity=0.329  Sum_probs=66.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |++||+|++||+++..|++++.|||+++........     +|+..|||||+..  .....+|.||||++++||++|..|
T Consensus       118 iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~p  190 (612)
T KOG0603|consen  118 IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLP  190 (612)
T ss_pred             HHHhcccccceeecccCccccCCchhhhHhHhhhhc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCC
Confidence            689999999999999999999999999876433221     6899999999997  346788999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       191 f~~  193 (612)
T KOG0603|consen  191 FGG  193 (612)
T ss_pred             Cch
Confidence            986

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.18  E-value=2e-11  Score=85.99  Aligned_cols=85  Identities=39%  Similarity=0.494  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcc-----eeeecccccceecccccCC---CCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTR-----TFTLIRGTRGYMAPEWSKN---TPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~~ape~~~~---~~~~~~~dv~s~G~~l   72 (137)
                      ++|||+||+|++++... .+++.|||.++........     ......|+..|++||...+   ...+...|+|++|+++
T Consensus       122 ~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~  201 (384)
T COG0515         122 IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITL  201 (384)
T ss_pred             eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHH
Confidence            68999999999999888 7999999998865433321     2345568999999999987   4677889999999999


Q ss_pred             HHHHhcccchhhhh
Q 042492           73 LEIEIVLINWAYKC   86 (137)
Q Consensus        73 ~el~~~~~~~~~~~   86 (137)
                      +++..+..||....
T Consensus       202 ~~~~~~~~p~~~~~  215 (384)
T COG0515         202 YELLTGLPPFEGEK  215 (384)
T ss_pred             HHHHhCCCCCCCCC
Confidence            99999998865443

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.11  E-value=7.7e-11  Score=78.65  Aligned_cols=73  Identities=45%  Similarity=0.712  Sum_probs=59.2

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el   75 (137)
                      ++|+|+++.||+++. ++.++++|||.+........ ......+...|++||..... ..+.+.|+|++|++++++
T Consensus       113 ~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         113 IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            689999999999998 89999999999886643321 11223467789999988776 678889999999999998

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.10  E-value=7.3e-11  Score=85.65  Aligned_cols=85  Identities=27%  Similarity=0.330  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEeCCC-----CcEEEEecCCce--ecCCCC-----cc-e-eeecccccceecccccCCCCCCcccceee
Q 042492            2 IIHCDIKPHNILMDEF-----WTAKISDFGLAK--LLMPDQ-----TR-T-FTLIRGTRGYMAPEWSKNTPISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~-----~~~kl~dfg~~~--~~~~~~-----~~-~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s   67 (137)
                      .+||||||.|+++...     ..+.+.|||+++  ......     .. . .....||..|+++....+...+.+.|+||
T Consensus       143 ~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles  222 (322)
T KOG1164|consen  143 FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLES  222 (322)
T ss_pred             cccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhh
Confidence            5899999999999854     458999999998  331111     11 1 12344999999999998888899999999


Q ss_pred             HHHHHHHHHhcccchhhhh
Q 042492           68 YGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~~~   86 (137)
                      ++.++.++..+.+||....
T Consensus       223 ~~Y~l~el~~g~LPW~~~~  241 (322)
T KOG1164|consen  223 LFYMLLELLKGSLPWEALE  241 (322)
T ss_pred             HHHHHHHHhcCCCCCcccc
Confidence            9999999999999996443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.09  E-value=2.8e-11  Score=83.63  Aligned_cols=95  Identities=27%  Similarity=0.293  Sum_probs=71.4

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcce------eeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRT------FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      .|||||||+|.|..-+   ..+.++|||+++.+....+..      .....||.+|.+-....+-..+.+.|+-|+|.++
T Consensus       132 fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvL  211 (341)
T KOG1163|consen  132 FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVL  211 (341)
T ss_pred             cccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhccee
Confidence            5899999999999754   445799999999775444322      2345588889887766666667889999999999


Q ss_pred             HHHHhcccchhhhh--cchhhhhhcc
Q 042492           73 LEIEIVLINWAYKC--FIDREFNKLV   96 (137)
Q Consensus        73 ~el~~~~~~~~~~~--~~~~~~~~~~   96 (137)
                      .....|.+||..-.  ...+.++++.
T Consensus       212 mYfnrG~LPWQglka~tk~QKyEkI~  237 (341)
T KOG1163|consen  212 MYFNRGSLPWQGLKAATKKQKYEKIS  237 (341)
T ss_pred             eeeecCCCcccccchhhHHHHHHHHH
Confidence            99999999997643  3345555554

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.08  E-value=4.9e-11  Score=91.75  Aligned_cols=74  Identities=27%  Similarity=0.421  Sum_probs=59.8

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc---CCCCCCcccceeeHHHHHHHHHh
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS---KNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~---~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      +|||+|..||++...+.+|++|||.+-.++-.-. .....+||++|||||+.   ..+.|..++|+|+.|+...|+..
T Consensus       134 ~hRdiKGanilltd~gDvklaDfgvsaqitati~-KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~e  210 (829)
T KOG0576|consen  134 IHRDIKGANILLTDEGDVKLADFGVSAQITATIA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE  210 (829)
T ss_pred             ccccccccceeecccCceeecccCchhhhhhhhh-hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhh
Confidence            7999999999999999999999999875532111 12346799999999976   35568889999999999988843

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.07  E-value=1.1e-10  Score=83.76  Aligned_cols=97  Identities=24%  Similarity=0.289  Sum_probs=75.5

Q ss_pred             eEecCCCCCCEEeCCC-----CcEEEEecCCceecCCCCcce------eeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEF-----WTAKISDFGLAKLLMPDQTRT------FTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~-----~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      +|.|||||+|.|+...     ..+.++|||+++....+.+..      .....||-+||+-....+..-+.+.|.-|+|-
T Consensus       145 LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGH  224 (449)
T KOG1165|consen  145 LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGH  224 (449)
T ss_pred             eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhh
Confidence            5899999999999743     457899999999875544422      23456999999999888888899999999999


Q ss_pred             HHHHHHhcccchhhhhc--chhhhhhccCC
Q 042492           71 VLLEIEIVLINWAYKCF--IDREFNKLVHD   98 (137)
Q Consensus        71 ~l~el~~~~~~~~~~~~--~~~~~~~~~~~   98 (137)
                      +++..+.|.+||..-..  ..+.+++|-+.
T Consensus       225 vFmYFLRGsLPWQGLKA~tnK~kYeKIGe~  254 (449)
T KOG1165|consen  225 VFMYFLRGSLPWQGLKADTNKEKYEKIGET  254 (449)
T ss_pred             hhhhhccCCCccccccCcchHHHHHHhccc
Confidence            99999999999986442  23455666443

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.07  E-value=9.7e-11  Score=83.41  Aligned_cols=81  Identities=19%  Similarity=0.274  Sum_probs=54.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--------CCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--------TPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~dv~s~G~~l~   73 (137)
                      |+|+|++++|++++.+|.+.++||+......  .. ... ...+..|.+||....        ..++.+.|.|++|+++|
T Consensus       166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g--~~-~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly  241 (288)
T PF14531_consen  166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAG--TR-YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY  241 (288)
T ss_dssp             EEEST-SGGGEEE-TTS-EEE--GGGEEETT--EE-EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred             eEecccceeeEEEcCCCCEEEcChHHHeecC--ce-eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence            7999999999999999999999998655431  11 111 234567889986643        24678899999999999


Q ss_pred             HHHhcccchhhhh
Q 042492           74 EIEIVLINWAYKC   86 (137)
Q Consensus        74 el~~~~~~~~~~~   86 (137)
                      .+..+..||....
T Consensus       242 ~lWC~~lPf~~~~  254 (288)
T PF14531_consen  242 SLWCGRLPFGLSS  254 (288)
T ss_dssp             HHHHSS-STCCCG
T ss_pred             HHHHccCCCCCCC
Confidence            9999999997554

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.93  E-value=5.7e-10  Score=88.13  Aligned_cols=80  Identities=20%  Similarity=0.222  Sum_probs=59.0

Q ss_pred             CCCCC-CEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchh
Q 042492            6 DIKPH-NILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWA   83 (137)
Q Consensus         6 dlk~~-nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~   83 (137)
                      +.+|. |++.......++.+||.++....... .......||+.|+|||++.+..++.++|+|||||++|||.+|..||.
T Consensus       502 ~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~  581 (669)
T cd05610         502 KPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFN  581 (669)
T ss_pred             CCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            33444 45555555567888888776532222 11233468999999999988889999999999999999999999986


Q ss_pred             hh
Q 042492           84 YK   85 (137)
Q Consensus        84 ~~   85 (137)
                      ..
T Consensus       582 ~~  583 (669)
T cd05610         582 DE  583 (669)
T ss_pred             CC
Confidence            44

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.86  E-value=3.1e-09  Score=78.31  Aligned_cols=55  Identities=27%  Similarity=0.285  Sum_probs=42.2

Q ss_pred             CeEecCC-CCCCEEeCCCCcEEEEecCCceecCCCCcce-------eeecccccceecccccC
Q 042492            1 LIIHCDI-KPHNILMDEFWTAKISDFGLAKLLMPDQTRT-------FTLIRGTRGYMAPEWSK   55 (137)
Q Consensus         1 ~iiHrdl-k~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~ape~~~   55 (137)
                      .|+|||| ||+||+++.++.++|+|||+++.+.......       .....+++.|++||.+.
T Consensus       131 gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        131 GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             CCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            3799999 9999999988999999999998764332211       12345777899999875

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.86  E-value=1.6e-09  Score=87.62  Aligned_cols=85  Identities=27%  Similarity=0.373  Sum_probs=59.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec--CCCCcceee----ecccccceecccccCCC----------C-CCcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL--MPDQTRTFT----LIRGTRGYMAPEWSKNT----------P-ISVKAN   64 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~--~~~~~~~~~----~~~~~~~~~ape~~~~~----------~-~~~~~d   64 (137)
                      |+|+|||.+|||+..=..+.++||...+..  ++......+    +...-.+|.|||.+...          . .+++.|
T Consensus       141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMD  220 (1431)
T KOG1240|consen  141 VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMD  220 (1431)
T ss_pred             ccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhh
Confidence            789999999999999889999999876542  222221111    11122369999977431          1 467899


Q ss_pred             eeeHHHHHHHHHh-cccchhhhh
Q 042492           65 VFNYGVVLLEIEI-VLINWAYKC   86 (137)
Q Consensus        65 v~s~G~~l~el~~-~~~~~~~~~   86 (137)
                      |+|.||++.|+.. |..+|...+
T Consensus       221 IFS~GCViaELf~Eg~PlF~LSQ  243 (1431)
T KOG1240|consen  221 IFSAGCVIAELFLEGRPLFTLSQ  243 (1431)
T ss_pred             hhhhhHHHHHHHhcCCCcccHHH
Confidence            9999999999854 567775544

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.77  E-value=6.1e-09  Score=82.35  Aligned_cols=69  Identities=28%  Similarity=0.370  Sum_probs=50.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVV   71 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~   71 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......+++.|.+||...... -...+++|++|+-
T Consensus       125 IiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~-~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         125 IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNREL-NMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             EEeCCccHHHEEEcCCCCEEEEeCCCCccccCCcc-cccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            79999999999999999999999999986543222 223345888999998654332 2344677888743

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.74  E-value=3.1e-09  Score=82.87  Aligned_cols=95  Identities=29%  Similarity=0.439  Sum_probs=75.7

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCC--CCcceeeeccc-ccceecccccCCCCC-CcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMP--DQTRTFTLIRG-TRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~--~~~~~~~~~~~-~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~   76 (137)
                      +.|||+||+|.+++.++ ..+.+|||++..+..  +.........| ++.|++||...+..+ ....|+||.|+++..+.
T Consensus       145 ~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~  224 (601)
T KOG0590|consen  145 VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAML  224 (601)
T ss_pred             cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccc
Confidence            57999999999999998 899999999987755  33333445568 999999999877433 56789999999999999


Q ss_pred             hcccchhhhhcchhhhhhcc
Q 042492           77 IVLINWAYKCFIDREFNKLV   96 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~   96 (137)
                      .+..||......++.+....
T Consensus       225 ~g~~p~~~~~~~~~~~~~~~  244 (601)
T KOG0590|consen  225 TGELPWDFPSRKDGRYSSWK  244 (601)
T ss_pred             cCCCCccccccccccceeec
Confidence            99999987776665444443

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=4.2e-09  Score=78.88  Aligned_cols=65  Identities=25%  Similarity=0.207  Sum_probs=52.8

Q ss_pred             CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhh
Q 042492           16 EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAY   84 (137)
Q Consensus        16 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~   84 (137)
                      .+..+||+|||.+-...    .-.+.-+.|..|.+||++.+..|+..+|+||++|+++||.+|-..|..
T Consensus       389 ~di~vKIaDlGNACW~~----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFeP  453 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVH----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEP  453 (590)
T ss_pred             cceeEEEeeccchhhhh----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecC
Confidence            34678999999886541    123445688999999999999999999999999999999888776654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.66  E-value=4e-09  Score=73.14  Aligned_cols=68  Identities=13%  Similarity=0.166  Sum_probs=46.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ++|||++|.|++++.++ ++++|||..+........             ..+.....+..++|+|++|+.+.-+..-...
T Consensus       156 i~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~~k~~~  221 (232)
T PRK10359        156 MVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYKKKLRK  221 (232)
T ss_pred             CccCCCChHHEEEeCCC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHHHHHHH
Confidence            78999999999999888 999999977644211110             0122333456789999999998766444444


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      |.
T Consensus       222 ~~  223 (232)
T PRK10359        222 FI  223 (232)
T ss_pred             HH
Confidence            43

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=1.2e-07  Score=70.18  Aligned_cols=83  Identities=24%  Similarity=0.268  Sum_probs=56.3

Q ss_pred             eEecCCCCCCEEeC--CCC--cEEEEecCCceecCCCCc----ce-eeecccccceecccccCCCC-----C-Cccccee
Q 042492            2 IIHCDIKPHNILMD--EFW--TAKISDFGLAKLLMPDQT----RT-FTLIRGTRGYMAPEWSKNTP-----I-SVKANVF   66 (137)
Q Consensus         2 iiHrdlk~~nill~--~~~--~~kl~dfg~~~~~~~~~~----~~-~~~~~~~~~~~ape~~~~~~-----~-~~~~dv~   66 (137)
                      |.|||+|++|||+.  .+.  ...++|||.+---.+..-    .+ .....|.-..||||+....+     . -.|+|.|
T Consensus       362 vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~W  441 (598)
T KOG4158|consen  362 VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTW  441 (598)
T ss_pred             chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhh
Confidence            57999999999984  333  347899998743211000    00 11122555689999875432     1 1479999


Q ss_pred             eHHHHHHHHHhcccchhh
Q 042492           67 NYGVVLLEIEIVLINWAY   84 (137)
Q Consensus        67 s~G~~l~el~~~~~~~~~   84 (137)
                      +.|.+.||+.....||+.
T Consensus       442 A~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  442 AAGALAYEIFGRSNPFYK  459 (598)
T ss_pred             hhhhhHHHHhccCCcccc
Confidence            999999999888889876

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.55  E-value=9.9e-08  Score=77.30  Aligned_cols=77  Identities=25%  Similarity=0.334  Sum_probs=61.5

Q ss_pred             eEecCCCCCCEEeC-------CCCcEEEEecCCceecC--CCCcceeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMD-------EFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~-------~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      |||+||||+|.+|.       .+..++|+|||.+.-+.  +.. ......++|-.+.++|...+.++++.+|.|.++.++
T Consensus       815 IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~  893 (974)
T KOG1166|consen  815 IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATV  893 (974)
T ss_pred             eecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHH
Confidence            89999999999994       24567999999886432  222 223445578889999999999999999999999999


Q ss_pred             HHHHhcc
Q 042492           73 LEIEIVL   79 (137)
Q Consensus        73 ~el~~~~   79 (137)
                      +-|++|.
T Consensus       894 h~mLFG~  900 (974)
T KOG1166|consen  894 HVMLFGK  900 (974)
T ss_pred             HHHHHHH
Confidence            9987765

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.53  E-value=5e-08  Score=73.96  Aligned_cols=114  Identities=20%  Similarity=0.385  Sum_probs=75.7

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCC-------CCcccceeeHHHHHHH
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTP-------ISVKANVFNYGVVLLE   74 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~-------~~~~~dv~s~G~~l~e   74 (137)
                      .|+.+++.|.+++..+.+|++|||+......... .......-..-|.+||.+....       .+.++|+||||++++|
T Consensus        71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~e  150 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYE  150 (484)
T ss_pred             eeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHH
Confidence            7999999999999999999999999876532000 0011111234589999887531       3567999999999999


Q ss_pred             HHhcccchhhhhcchh---hhhhccC-C------ccc-cHHHHHHHHHHHHHh
Q 042492           75 IEIVLINWAYKCFIDR---EFNKLVH-D------EEV-NKKTLENMIKVRLWC  116 (137)
Q Consensus        75 l~~~~~~~~~~~~~~~---~~~~~~~-~------~~~-~~~~~~~~~~~~l~C  116 (137)
                      +.+...||........   ....+.+ .      ... ..+....++.+...|
T Consensus       151 i~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~c  203 (484)
T KOG1023|consen  151 ILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARC  203 (484)
T ss_pred             HHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHh
Confidence            9999999987543322   2222222 1      111 113333678888888

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.41  E-value=1.1e-07  Score=65.18  Aligned_cols=81  Identities=19%  Similarity=0.112  Sum_probs=52.5

Q ss_pred             eEecCC-CCCCEEeCCCCcEEEEecCCceecCCCCcc----e--e-----e-ecccccceecccccCC-CCCC-ccccee
Q 042492            2 IIHCDI-KPHNILMDEFWTAKISDFGLAKLLMPDQTR----T--F-----T-LIRGTRGYMAPEWSKN-TPIS-VKANVF   66 (137)
Q Consensus         2 iiHrdl-k~~nill~~~~~~kl~dfg~~~~~~~~~~~----~--~-----~-~~~~~~~~~ape~~~~-~~~~-~~~dv~   66 (137)
                      |+|||| ||.||+++.++.++|+|||++.........    .  .     . ....++.+++|+...- ...+ .+.+.+
T Consensus       112 IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~  191 (218)
T PRK12274        112 VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWF  191 (218)
T ss_pred             CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHH
Confidence            799999 799999999999999999999854332210    0  0     0 0113445555542211 1122 345677


Q ss_pred             eHHHHHHHHHhcccch
Q 042492           67 NYGVVLLEIEIVLINW   82 (137)
Q Consensus        67 s~G~~l~el~~~~~~~   82 (137)
                      +-|.-++.+.++..+.
T Consensus       192 ~~g~~~~~~~~~~~~~  207 (218)
T PRK12274        192 ATGKPVYRFVTRRVLH  207 (218)
T ss_pred             HhcchHHHHHhccCCc
Confidence            7899999998887664

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.35  E-value=3e-07  Score=65.10  Aligned_cols=103  Identities=17%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             CCCCCCEEeCCCCcEEEE--ecCCceecCCCCcceeeecccccceecccccCCCCCC---cccceeeHHHHHHHHHhccc
Q 042492            6 DIKPHNILMDEFWTAKIS--DFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS---VKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         6 dlk~~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~---~~~dv~s~G~~l~el~~~~~   80 (137)
                      .+.+.+++++.+...+++  |--++..  .      ....-++.|++||.++..+-+   ..+|+|||++++||+.+...
T Consensus       316 ~lns~hvmidedltarismad~kfsfq--e------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trev  387 (448)
T KOG0195|consen  316 YLNSKHVMIDEDLTARISMADTKFSFQ--E------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREV  387 (448)
T ss_pred             hcccceEEecchhhhheecccceeeee--c------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccc
Confidence            467888999887776654  3222211  1      011235789999998765432   45899999999999999999


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      ||+.-...+..+.-.+.+  ...+......|.+++.-|
T Consensus       388 pfadlspmecgmkialeglrv~ippgis~hm~klm~ic  425 (448)
T KOG0195|consen  388 PFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNIC  425 (448)
T ss_pred             ccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHH
Confidence            998776666555544544  223333444455666666

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.32  E-value=4.8e-07  Score=60.97  Aligned_cols=29  Identities=31%  Similarity=0.281  Sum_probs=26.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++ ++.++++|||++...
T Consensus       139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         139 LVHGDLSEYNILYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EecCCCChhhEEEE-CCCEEEEEcccceec
Confidence            79999999999998 789999999998765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.23  E-value=6.3e-07  Score=60.56  Aligned_cols=29  Identities=21%  Similarity=0.196  Sum_probs=25.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++ ++.++++|||++...
T Consensus       139 iiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         139 LVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             cccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            79999999999998 478999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.03  E-value=4.7e-06  Score=56.37  Aligned_cols=30  Identities=33%  Similarity=0.332  Sum_probs=27.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++.++.++++|||.+...
T Consensus       146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         146 IIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             CCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            789999999999999999999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.90  E-value=8.2e-06  Score=57.07  Aligned_cols=30  Identities=33%  Similarity=0.470  Sum_probs=27.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++.++.++++|||.++..
T Consensus       163 I~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        163 VYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            789999999999998889999999988754

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.79  E-value=1.6e-05  Score=52.96  Aligned_cols=29  Identities=31%  Similarity=0.312  Sum_probs=26.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++ ++.++++|||.+...
T Consensus       136 ivH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         136 LVHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             cCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            78999999999999 889999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.77  E-value=2e-05  Score=64.35  Aligned_cols=94  Identities=23%  Similarity=0.326  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecC--CCC-----------------------c-----ceeeecccccceecc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQ-----------------------T-----RTFTLIRGTRGYMAP   51 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~--~~~-----------------------~-----~~~~~~~~~~~~~ap   51 (137)
                      ++|||+++.|++...+++.++.+|+......  +..                       .     .......+++.|.+|
T Consensus       925 r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laP 1004 (1205)
T KOG0606|consen  925 RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAP 1004 (1205)
T ss_pred             hhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCC
Confidence            6899999999999999999999987332110  000                       0     001123478899999


Q ss_pred             cccCCCCCCcccceeeHHHHHHHHHhcccchhhhhcchhhhhhcc
Q 042492           52 EWSKNTPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLV   96 (137)
Q Consensus        52 e~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~~~~~~~~~~~~~   96 (137)
                      |...+......+|+|++|+.++|..+|..||..... ++.++.+.
T Consensus      1005 e~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp-q~~f~ni~ 1048 (1205)
T KOG0606|consen 1005 EILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP-QQIFENIL 1048 (1205)
T ss_pred             cccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch-hhhhhccc
Confidence            999988888899999999999999999999875443 33344444

>smart00090 RIO RIO-like kinase

Probab=97.76  E-value=1.9e-05  Score=55.18  Aligned_cols=29  Identities=28%  Similarity=0.289  Sum_probs=26.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||+||+++ ++.++++|||.+...
T Consensus       170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      170 LVHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            89999999999999 788999999987654

>PRK10345 hypothetical protein; Provisional

Probab=97.57  E-value=4.7e-05  Score=52.32  Aligned_cols=25  Identities=28%  Similarity=0.367  Sum_probs=21.1

Q ss_pred             eEecCCCCCCEEeCC----CCcEEEEecC
Q 042492            2 IIHCDIKPHNILMDE----FWTAKISDFG   26 (137)
Q Consensus         2 iiHrdlk~~nill~~----~~~~kl~dfg   26 (137)
                      |+|||+||+||+++.    +..++|+|++
T Consensus       126 IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345        126 IVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            899999999999974    3479999954

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.51  E-value=9.4e-05  Score=46.79  Aligned_cols=29  Identities=34%  Similarity=0.463  Sum_probs=26.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.|++++..+.+++.||+.++.
T Consensus       110 i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120         110 LCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             EEecCCCcceEEEECCcEEEEEecccccC
Confidence            78999999999999888999999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.44  E-value=6.2e-05  Score=58.43  Aligned_cols=29  Identities=31%  Similarity=0.460  Sum_probs=25.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|||+||+||++ .++.++++|||+++..
T Consensus       449 iiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        449 IVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             CccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            7899999999999 5778999999998753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.39  E-value=0.00015  Score=48.87  Aligned_cols=28  Identities=36%  Similarity=0.532  Sum_probs=25.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|++|.|++++ ++.+++.|||+++.
T Consensus       111 i~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724       111 IVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            78999999999999 78899999998765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.38  E-value=0.00014  Score=49.37  Aligned_cols=28  Identities=36%  Similarity=0.581  Sum_probs=25.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|||++|.||+++ ++.++++|||.++.
T Consensus       116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            68999999999999 78899999998764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.28  E-value=0.00011  Score=57.81  Aligned_cols=75  Identities=21%  Similarity=0.356  Sum_probs=56.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--------ceeeecccccceecccccCCCCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~   73 (137)
                      +||+++.|++|.++.++.-|++.|+.+....++..        .......-..-|.+||++.+..-+.++|++|+|++++
T Consensus       121 ~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~  200 (700)
T KOG2137|consen  121 VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIY  200 (700)
T ss_pred             eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEE
Confidence            68999999999999999999999987764433111        1111122344699999998877788999999999987


Q ss_pred             HHH
Q 042492           74 EIE   76 (137)
Q Consensus        74 el~   76 (137)
                      .+.
T Consensus       201 ~i~  203 (700)
T KOG2137|consen  201 TIY  203 (700)
T ss_pred             EEe
Confidence            774

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.22  E-value=0.00035  Score=53.10  Aligned_cols=31  Identities=29%  Similarity=0.406  Sum_probs=28.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecC
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLM   32 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~   32 (137)
                      ++|+|++|.||+++.++.+++.|||++..+.
T Consensus       278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            6899999999999999999999999987764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.21  E-value=0.00036  Score=53.73  Aligned_cols=84  Identities=25%  Similarity=0.309  Sum_probs=62.2

Q ss_pred             CeEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCccee----eecccccceecccccCCCCCCcccceeeHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTF----TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el   75 (137)
                      .++|-|+|+.|+.+..+ ..+++.|||+...+....-...    ....|...|++||...+. ++...|++++|.+.++.
T Consensus       242 ~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~  320 (524)
T KOG0601|consen  242 NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEA  320 (524)
T ss_pred             cccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhh
Confidence            37899999999999988 8889999999887644332111    111356679999988643 56789999999999998


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      ..+......+
T Consensus       321 ~l~~~~~~~g  330 (524)
T KOG0601|consen  321 ILGSHLPSVG  330 (524)
T ss_pred             HhhcccccCC
Confidence            7666554433

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.19  E-value=0.00034  Score=45.67  Aligned_cols=28  Identities=29%  Similarity=0.330  Sum_probs=24.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.|++++ ++.++++||+.+..
T Consensus       109 ~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151         109 PCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             eecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            58999999999998 56789999997653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.00  E-value=0.0024  Score=48.44  Aligned_cols=79  Identities=10%  Similarity=0.112  Sum_probs=57.0

Q ss_pred             ecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHHhc
Q 042492            4 HCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         4 Hrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      -+|++++|+|+++++.+.+.|-.....-.+  ........|...|++||.-.     +..-+...|.+.+|+++++++.+
T Consensus       140 vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~g  217 (637)
T COG4248         140 VGDVNQNSFLVSDDSKVVLVDSDSFQINAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFG  217 (637)
T ss_pred             ccccCccceeeecCceEEEEcccceeeccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhc
Confidence            379999999999999999988543333222  22234456888999999654     22234568999999999998765


Q ss_pred             -ccchhh
Q 042492           79 -LINWAY   84 (137)
Q Consensus        79 -~~~~~~   84 (137)
                       .+||..
T Consensus       218 grHPysG  224 (637)
T COG4248         218 GRHPYSG  224 (637)
T ss_pred             CCCCCCc
Confidence             788865

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.86  E-value=0.00092  Score=45.52  Aligned_cols=29  Identities=17%  Similarity=0.226  Sum_probs=25.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|+|+++.||++.. +.+.++|||.+...
T Consensus       146 lVHGDLs~~NIL~~~-~~v~iIDF~qav~~  174 (197)
T cd05146         146 LVHADLSEYNMLWHD-GKVWFIDVSQSVEP  174 (197)
T ss_pred             eecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence            799999999999974 67899999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.85  E-value=0.0011  Score=44.78  Aligned_cols=28  Identities=32%  Similarity=0.563  Sum_probs=24.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      |+|+|+.++|+++.... +.++|||++..
T Consensus       113 ivHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642         113 IVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             eecCCCccceEEEeCCc-EEEEECCcccc
Confidence            79999999999998765 88999999864

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.52  E-value=0.0018  Score=50.39  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=27.8

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecC
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLM   32 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~   32 (137)
                      ++|+|++|.||+++.++    .+++.|||+...+.
T Consensus       281 ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        281 FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            68999999999999887    89999999987664

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.48  E-value=0.0042  Score=42.00  Aligned_cols=29  Identities=41%  Similarity=0.497  Sum_probs=23.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|+|+...||+++.+ .+.++|||.+...
T Consensus       128 ivHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  128 IVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             EEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             ceecCCChhhEEeecc-eEEEEecCcceec
Confidence            7999999999999887 8999999987654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.22  E-value=0.002  Score=49.78  Aligned_cols=75  Identities=28%  Similarity=0.348  Sum_probs=51.7

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCcceeeecccccce-ecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGY-MAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~-~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      ++|+|+|++||++..+ +..++.|||....+....   .........| .++.......+..++|++++|..+.+..++.
T Consensus       387 ~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~---~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~  463 (524)
T KOG0601|consen  387 FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS---GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGS  463 (524)
T ss_pred             hhcccccccceeeccchhhhhccccccccccceec---ccccccccccccchhhccccccccccccccccccccccccCc
Confidence            4799999999999876 778999998875432111   1111123334 3555566667788999999998888876554

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.93  E-value=0.0054  Score=41.64  Aligned_cols=29  Identities=41%  Similarity=0.604  Sum_probs=23.7

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~   30 (137)
                      |||+||..+||++..++   .+.++|||++..
T Consensus       134 iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  134 IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             eecccccccceEEecCCCcCceEEEeecchhc
Confidence            79999999999996543   347999998764

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.90  E-value=0.0095  Score=40.34  Aligned_cols=29  Identities=28%  Similarity=0.445  Sum_probs=24.8

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++.  ++...++||+.+..
T Consensus       176 l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         176 LVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             EEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            699999999999998  56678999987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.47  E-value=0.017  Score=42.58  Aligned_cols=77  Identities=19%  Similarity=0.314  Sum_probs=50.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCcee--cCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKL--LMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~--~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      ||+|+++.-+.+.+..++.+|+.--.-...  ..+..... .....+-++|.+|++-.....+..+|||+||...++|..
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            789999999999999888877653211110  00000000 011125668889998777777788999999998888843

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.36  E-value=0.013  Score=41.88  Aligned_cols=29  Identities=21%  Similarity=0.164  Sum_probs=24.4

Q ss_pred             eEecCCCCCCEEeCC-------CCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDE-------FWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~-------~~~~kl~dfg~~~~   30 (137)
                      |+|+|+++.||+++.       ...+.++||+.++.
T Consensus       159 i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        159 INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             CccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            689999999999975       46789999997753

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.33  E-value=0.013  Score=40.07  Aligned_cols=30  Identities=30%  Similarity=0.376  Sum_probs=25.7

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~~   31 (137)
                      |+|+|+++.|||++.+.   .+.++||..++..
T Consensus       139 i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  139 IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            68999999999999776   7889999877653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.08  E-value=0.027  Score=39.09  Aligned_cols=29  Identities=28%  Similarity=0.489  Sum_probs=24.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++......+.||+.+..
T Consensus       166 l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         166 WFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             EEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            69999999999998776678999987643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=94.64  E-value=0.028  Score=40.72  Aligned_cols=28  Identities=29%  Similarity=0.392  Sum_probs=24.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      +||+|+.+.|++++.+....++||+.+.
T Consensus       189 liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        189 VIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cCCCCCCCCcEEEECCceEEEEeccccc
Confidence            7999999999999876666899998764

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=94.57  E-value=0.028  Score=38.16  Aligned_cols=29  Identities=41%  Similarity=0.489  Sum_probs=19.6

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++ .++.+.+.||+.+..
T Consensus       168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  168 LIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             EE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             EEEeccccccceeeeccceeEEEecccceE
Confidence            69999999999999 556668999986643

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.24  E-value=0.053  Score=37.68  Aligned_cols=28  Identities=25%  Similarity=0.213  Sum_probs=24.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++.+....|+||+.+.
T Consensus       165 l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         165 VTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EECCCCCCccEEEeCCcEEEEEEccccc
Confidence            6899999999999987777899998664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.06  E-value=0.058  Score=39.74  Aligned_cols=29  Identities=38%  Similarity=0.538  Sum_probs=25.3

Q ss_pred             CeEecCCCCCCEEeCCCCc-EEEEecCCce
Q 042492            1 LIIHCDIKPHNILMDEFWT-AKISDFGLAK   29 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~-~kl~dfg~~~   29 (137)
                      ++||.|+.+.|++++.... +.+.||+-+.
T Consensus       198 ~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         198 QIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            4899999999999998774 8999998764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.98  E-value=0.069  Score=36.80  Aligned_cols=28  Identities=29%  Similarity=0.383  Sum_probs=24.1

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.||+++. +..+.++||-.+.
T Consensus       172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            589999999999997 5779999997653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.89  E-value=0.075  Score=38.18  Aligned_cols=28  Identities=29%  Similarity=0.323  Sum_probs=24.5

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~   29 (137)
                      ++|.|+.+.||+++.+    +.+.++||..+.
T Consensus       181 lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         181 FCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             EEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            5899999999999874    789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.73  E-value=0.057  Score=39.01  Aligned_cols=28  Identities=36%  Similarity=0.518  Sum_probs=24.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++.++...+.||+.+.
T Consensus       189 l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       189 VIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCCCCcCcEEEECCceEEEeeccccc
Confidence            6899999999999988777899998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.62  E-value=0.053  Score=38.76  Aligned_cols=28  Identities=32%  Similarity=0.408  Sum_probs=24.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++.+..+.+.||..+.
T Consensus       177 l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         177 VIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CCccCcCcccEEEeCCceEEEeehhhhc
Confidence            6899999999999988777899998654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.49  E-value=0.083  Score=36.68  Aligned_cols=27  Identities=19%  Similarity=0.137  Sum_probs=23.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++.++ +.++||+.+.
T Consensus       155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             eEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            47999999999999877 9999998664

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=93.42  E-value=0.18  Score=40.26  Aligned_cols=74  Identities=11%  Similarity=0.112  Sum_probs=47.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ++|.++.-..+.++..|.-||.+|-++........ .......-..|..|+......  -..|.|-||++++++..+
T Consensus       126 lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  126 LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence            58999999999999999999999866543211110 001111122355565443222  346999999999999777

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.22  E-value=0.12  Score=35.07  Aligned_cols=29  Identities=24%  Similarity=0.311  Sum_probs=23.6

Q ss_pred             eEecCCCCCCEEeCCCC-----cEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFW-----TAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-----~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|+++..+.     .+.+.||..++.
T Consensus       122 l~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      122 LNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             EeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            68999999999997543     578999987653

subfamily of choline kinases

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=93.16  E-value=0.089  Score=37.65  Aligned_cols=29  Identities=34%  Similarity=0.557  Sum_probs=23.9

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++.++ ...+.||+.+..
T Consensus       187 lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         187 LVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            68999999999998744 457999987654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=93.15  E-value=0.077  Score=38.15  Aligned_cols=28  Identities=32%  Similarity=0.373  Sum_probs=25.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+..-||+++.++.+.++||--+.
T Consensus       223 iVHGDlSefNIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         223 IVHGDLSEFNILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             ccccCCchheEEEecCCCEEEEeCcccc
Confidence            6999999999999999999999996443

>TIGR02721 ycfN_thiK thiamine kinase

Probab=93.08  E-value=0.091  Score=36.87  Aligned_cols=28  Identities=21%  Similarity=0.284  Sum_probs=23.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++.++ +.++||..+..
T Consensus       148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       148 PLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            58999999999998876 68999986643

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.63  E-value=0.13  Score=34.78  Aligned_cols=28  Identities=18%  Similarity=0.248  Sum_probs=23.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      .+|+|+.|.|+++..++ ++++||+.+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            37999999999998776 88999987643

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=92.41  E-value=0.13  Score=36.88  Aligned_cols=27  Identities=30%  Similarity=0.443  Sum_probs=23.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++. +.+.+.||+.+.
T Consensus       189 liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       189 FCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             eEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            699999999999987 567899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.69  E-value=0.24  Score=36.41  Aligned_cols=30  Identities=30%  Similarity=0.515  Sum_probs=27.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+|..+.|++++......|.||+.+...
T Consensus       200 lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         200 LVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             eeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            799999999999999888999999988754

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=90.80  E-value=0.25  Score=33.63  Aligned_cols=28  Identities=36%  Similarity=0.527  Sum_probs=19.4

Q ss_pred             eEecCCCCCCEEe-CCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILM-DEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill-~~~~~~kl~dfg~~~   29 (137)
                      +.|.|+.+.||++ ..++.++++||-.+.
T Consensus       145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  145 FCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             EeeccCccccEEeccCCCeEEEecHHHHh
Confidence            4799999999999 788999999997764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02236 choline kinase

Probab=90.61  E-value=0.29  Score=36.19  Aligned_cols=29  Identities=31%  Similarity=0.458  Sum_probs=24.3

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.||+++. ++.+.++||..+..
T Consensus       202 ~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        202 FCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             EEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            589999999999976 46799999977653

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=90.59  E-value=0.021  Score=49.93  Aligned_cols=80  Identities=13%  Similarity=0.090  Sum_probs=61.3

Q ss_pred             EecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccch
Q 042492            3 IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINW   82 (137)
Q Consensus         3 iHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~   82 (137)
                      +|+++|..|.++..+..+++.++|+.+...+ .........+++.|+.++....-.++.+.|+|..|+.+++...+..++
T Consensus      1362 v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1362 VSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             hhhhhhhhccceecCCcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            6899999999999999999999999984432 222223345777888888877777787899999999998886665555


Q ss_pred             h
Q 042492           83 A   83 (137)
Q Consensus        83 ~   83 (137)
                      .
T Consensus      1441 i 1441 (2724)
T KOG1826|consen 1441 I 1441 (2724)
T ss_pred             H
Confidence            4

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=90.47  E-value=0.21  Score=36.21  Aligned_cols=28  Identities=21%  Similarity=0.318  Sum_probs=25.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.|++++.++...++||-.+.
T Consensus       198 lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       198 LVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            6999999999999988889999997654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.30  E-value=0.31  Score=34.84  Aligned_cols=28  Identities=25%  Similarity=0.335  Sum_probs=25.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|.|+.+.|++.+..+.+.++||--+.
T Consensus       155 ~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         155 PCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             eecCCCCccceEEcCCCcEEEEecccCC
Confidence            5899999999999998999999996554

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=90.11  E-value=0.2  Score=37.40  Aligned_cols=16  Identities=44%  Similarity=0.796  Sum_probs=13.3

Q ss_pred             eEecCCCCCCEEeCCC
Q 042492            2 IIHCDIKPHNILMDEF   17 (137)
Q Consensus         2 iiHrdlk~~nill~~~   17 (137)
                      .+|-|+||.|||+-.+
T Consensus       300 F~H~DLKPdNILiFds  315 (434)
T PF05445_consen  300 FLHVDLKPDNILIFDS  315 (434)
T ss_pred             eeecccCcCcEEEecC
Confidence            4899999999998443

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PRK06148 hypothetical protein; Provisional

Probab=89.23  E-value=0.39  Score=40.63  Aligned_cols=29  Identities=38%  Similarity=0.412  Sum_probs=24.0

Q ss_pred             CeEecCCCCCCEEeCCCC--c-EEEEecCCce
Q 042492            1 LIIHCDIKPHNILMDEFW--T-AKISDFGLAK   29 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~--~-~kl~dfg~~~   29 (137)
                      ++||.|+.+.||+++.+.  . ..|+|||-+.
T Consensus       204 ~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        204 QVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             ceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            479999999999998764  3 4699999764

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=88.89  E-value=0.3  Score=34.90  Aligned_cols=29  Identities=31%  Similarity=0.359  Sum_probs=23.5

Q ss_pred             eEecCCCCCCEEeCCC--C---cEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEF--W---TAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~--~---~~kl~dfg~~~~   30 (137)
                      ++|+|+...|++...+  +   .+.+.||..++.
T Consensus       217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             EEcCccCHHhEeEccccccccccceeeccccccC
Confidence            6899999999999654  2   578999987653

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=88.25  E-value=0.47  Score=33.77  Aligned_cols=29  Identities=28%  Similarity=0.303  Sum_probs=25.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+||.-=|||+. ++.+.++|+|-+...
T Consensus       188 LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         188 LVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             cccccchhhheEEE-CCeEEEEECcccccc
Confidence            68999999999999 788999999877544

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=88.10  E-value=0.4  Score=36.27  Aligned_cols=30  Identities=30%  Similarity=0.402  Sum_probs=26.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |.=||++...||+++ .|.+.++||.++|..
T Consensus       342 ~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         342 PFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             Ccccccccccceeee-cCceEEEEeeeeecc
Confidence            345999999999999 899999999999853

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=86.86  E-value=0.31  Score=37.81  Aligned_cols=16  Identities=50%  Similarity=0.847  Sum_probs=13.9

Q ss_pred             eEecCCCCCCEEeCCC
Q 042492            2 IIHCDIKPHNILMDEF   17 (137)
Q Consensus         2 iiHrdlk~~nill~~~   17 (137)
                      |||.||||+|||+..+
T Consensus       209 IIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  209 IIHTDLKPENVLLCST  224 (590)
T ss_pred             ccccCCCcceeeeecc
Confidence            7999999999999543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=86.84  E-value=0.35  Score=38.90  Aligned_cols=65  Identities=23%  Similarity=0.181  Sum_probs=47.6

Q ss_pred             CEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492           11 NILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus        11 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ||+... ...+..+|+....+....  ......+++.+++||....+.+....|.|+.+.-..++--+
T Consensus       362 ~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~  426 (829)
T KOG0576|consen  362 NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPG  426 (829)
T ss_pred             cccccc-cccccccccCCcccCccc--ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCC
Confidence            555544 567888999877664433  22344588999999999888888999999999866666333

>PRK06149 hypothetical protein; Provisional

Probab=85.23  E-value=0.75  Score=38.82  Aligned_cols=29  Identities=24%  Similarity=0.264  Sum_probs=23.2

Q ss_pred             CeEecCCCCCCEEeCCCC--c---EEEEecCCce
Q 042492            1 LIIHCDIKPHNILMDEFW--T---AKISDFGLAK   29 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~--~---~kl~dfg~~~   29 (137)
                      ++||.|+...||+++.+.  .   ..++|||-+.
T Consensus       209 g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        209 QAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            479999999999998642  2   4799999754

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=84.65  E-value=0.99  Score=34.27  Aligned_cols=28  Identities=25%  Similarity=0.368  Sum_probs=23.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||++..+ .++++|+-++..
T Consensus       225 l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        225 LLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             eeeccCCcccEEeeCC-CcEEEecccccc
Confidence            6899999999999765 589999976653

>PRK09902 hypothetical protein; Provisional

Probab=84.63  E-value=0.77  Score=31.82  Aligned_cols=29  Identities=14%  Similarity=-0.031  Sum_probs=23.7

Q ss_pred             eEecCCCCCCEEeCCCCc--EEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWT--AKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~--~kl~dfg~~~~   30 (137)
                      +.|+|+.+.||+++..+.  ++++||-.++.
T Consensus       149 v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        149 RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            579999999999985556  89999976553

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=84.60  E-value=0.69  Score=32.74  Aligned_cols=25  Identities=36%  Similarity=0.484  Sum_probs=22.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecC
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFG   26 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg   26 (137)
                      .+|+|..|+||+-|+.|.+|+.|=+
T Consensus       164 ~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  164 CLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             eecCCCChhheeecCCCCEEecChh
Confidence            4799999999999999999999954

The function of this family is unknown.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=83.85  E-value=1.3  Score=32.54  Aligned_cols=28  Identities=21%  Similarity=0.316  Sum_probs=23.6

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~   29 (137)
                      .+|.|+.+.||+++. ++.++++||..+.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            489999999999974 5689999997654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=82.75  E-value=1.4  Score=30.79  Aligned_cols=27  Identities=26%  Similarity=0.302  Sum_probs=22.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      +.|+|..|.|+++..+ .+++.|++..+
T Consensus       156 ~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  156 FYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             CccCCCCcCcEEEECC-cEEEEECcccc
Confidence            4799999999999865 48899997654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK11768 serine/threonine protein kinase; Provisional

Probab=82.66  E-value=1  Score=33.03  Aligned_cols=26  Identities=31%  Similarity=0.367  Sum_probs=22.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      +||+|+.+.|++++ + ...+.||+-+.
T Consensus       198 liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        198 RLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            68999999999995 3 57899998765

>PHA03111 Ser/Thr kinase; Provisional

Probab=80.10  E-value=2  Score=32.18  Aligned_cols=17  Identities=41%  Similarity=0.647  Sum_probs=14.0

Q ss_pred             eEecCCCCCCEEeCCCC
Q 042492            2 IIHCDIKPHNILMDEFW   18 (137)
Q Consensus         2 iiHrdlk~~nill~~~~   18 (137)
                      .+|-|+||.|||+-.+.
T Consensus       304 F~H~DLKPdNILiFds~  320 (444)
T PHA03111        304 FLHVDLKPDNILIFDSD  320 (444)
T ss_pred             eeeccCCCCcEEEecCC
Confidence            48999999999995443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	137
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		6e-15
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-13
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		8e-12
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		7e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-09
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		6e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		7e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		7e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		7e-09
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-09
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		3e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		3e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		3e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		9e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		1e-07
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-07
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-07
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-07
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-07
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-07
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-07
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-07
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-07
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-07
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-07
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-07
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-07
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		3e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-07
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		3e-07
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		3e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		3e-07
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		3e-07
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-07
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-07
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-07
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		6e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		7e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		7e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		8e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		8e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		9e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		9e-07
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-06
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-06
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-06
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-06
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-06
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-06
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-06
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-06
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-06
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-06
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-06
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-06
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-06
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-06
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-06
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		3e-06
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		3e-06
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		3e-06
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-06
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-06
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		3e-06
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-06
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-06
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-06
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-06
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-06
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-06
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-06
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-06
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-06
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		3e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-06
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-06
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-06
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-06
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-06
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-06
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-06
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		3e-06
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-06
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-06
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		4e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		4e-06
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-06
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-06
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-06
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-06
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-06
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-06
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-06
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		4e-06
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		4e-06
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		4e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-06
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-06
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-06
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-06
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		7e-06
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-06
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		8e-06
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		8e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		8e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		8e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		9e-06
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-06
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		9e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		9e-06
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-05
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-05
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		1e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		1e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-05
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-05
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		1e-05
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-05
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-05
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-05
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-05
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		3e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		3e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		3e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		3e-05
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-05
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-05
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		4e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		4e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-05
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-05
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-05
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-05
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-05
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		5e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-05
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		6e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		6e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		6e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		7e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		7e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		7e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		7e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		7e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		7e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		7e-05
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		7e-05
3kk9_A	282	Camkii Substrate Complex B Length = 282		7e-05
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		8e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		8e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		8e-05
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		8e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		8e-05
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		8e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		9e-05
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		9e-05
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		9e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		9e-05
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		9e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		9e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		9e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		9e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		9e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		9e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		9e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		9e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		1e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		1e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-04
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-04
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		1e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		1e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-04
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		2e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-04
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		2e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		2e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		2e-04
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-04
3soa_A	444	Full-Length Human Camkii Length = 444		2e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-04
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-04
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-04
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-04
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		4e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-04
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		4e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		4e-04
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		5e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		5e-04
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		5e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-04
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		5e-04
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		5e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		5e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		5e-04
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		5e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		5e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		5e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		5e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		6e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		6e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-04
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		7e-04
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-04
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		7e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		7e-04
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		7e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		7e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		7e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		7e-04
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		7e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-04
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		7e-04
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-04
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		7e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		7e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		7e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		7e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		7e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-04
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		7e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		7e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		7e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		7e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		7e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		7e-04
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		7e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-04
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		7e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		7e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		7e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		8e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		8e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		8e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		8e-04
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		8e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		8e-04
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		8e-04
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		8e-04
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		8e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		8e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		8e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		8e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		8e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		9e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		9e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		9e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		9e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		9e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		9e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 31/154 (20%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+K  NIL+DE + A + DFGLAKL+          +RGT G++APE+      S 
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 62  KANVFNYGVVLLEI----------------EIVLINWAYKCFIDREFNKLVH-DEEVNKK 104
           K +VF YGV+LLE+                +++L++W      +++   LV  D + N K
Sbjct: 223 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 282
Query: 105 --TLENMIKVRLWCS------------VVMMLEG 124
              +E +I+V L C+            VV MLEG
Sbjct: 283 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 31/154 (20%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+K  NIL+DE + A + DFGLAKL+          +RG  G++APE+      S 
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 62  KANVFNYGVVLLEI----------------EIVLINWAYKCFIDREFNKLVH-DEEVNKK 104
           K +VF YGV+LLE+                +++L++W      +++   LV  D + N K
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274
Query: 105 --TLENMIKVRLWCS------------VVMMLEG 124
              +E +I+V L C+            VV MLEG
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH DIK  NIL+DE +TAKISDFGLA+      QT   + I GT  YMAPE  +   I+ 
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITP 213
Query: 62  KANVFNYGVVLLEI 75
           K++++++GVVLLEI
Sbjct: 214 KSDIYSFGVVLLEI 227

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH DIK  NIL+DE +TAKISDFGLA+      QT     I GT  YMAPE  +   I+ 
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITP 213
Query: 62  KANVFNYGVVLLEI 75
           K++++++GVVLLEI
Sbjct: 214 KSDIYSFGVVLLEI 227

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH DIK  NIL+DE +TAKISDFGLA+      Q      I GT  YMAPE  +   I+ 
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITP 207
Query: 62  KANVFNYGVVLLEI 75
           K++++++GVVLLEI
Sbjct: 208 KSDIYSFGVVLLEI 221

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NIL+DE +  KI+DFG++K     DQT    +++GT GY+ PE+     ++
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 61  VKANVFNYGVVLLEI 75
            K++V+++GVVL E+
Sbjct: 220 EKSDVYSFGVVLFEV 234

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IH DIK  NIL+DE +TAKISDFGLA+      Q    + I GT  Y APE  +   I+ 
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITP 204
Query: 62  KANVFNYGVVLLEI 75
           K++++++GVVLLEI
Sbjct: 205 KSDIYSFGVVLLEI 218

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NIL+DE +  KI+DFG++K      QT    +++GT GY+ PE+     ++
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 61  VKANVFNYGVVLLEI 75
            K++V+++GVVL E+
Sbjct: 220 EKSDVYSFGVVLFEV 234

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YMAPE  + T  SV
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPERLQGTHYSV 192
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 193 QSDIWSMGLSLVELAV 208

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIKP NIL+D   T KI DFG+AK L          + GT  Y +PE +K      
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 62  KANVFNYGVVLLEI 75
             ++++ G+VL E+
Sbjct: 192 CTDIYSIGIVLYEM 205

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 201
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 202 QSDIWSMGLSLVEMAV 217

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 183 QSDIWSMGLSLVEMAV 198

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 183 QSDIWSMGLSLVEMAV 198

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 209
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 210 QSDIWSMGLSLVEMAV 225

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 183 QSDIWSMGLSLVEMAV 198

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 183 QSDIWSMGLSLVEMAV 198

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+ +    F    GTR YM+PE  + T  SV
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSV 185
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 186 QSDIWSMGLSLVEMAV 201

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 183 QSDIWSMGLSLVEMAV 198

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 244
Query: 62  KANVFNYGVVLLEIEI 77
           ++++++ G+ L+E+ +
Sbjct: 245 QSDIWSMGLSLVEMAV 260

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I+H D+K  N+L+D+ +T K+ DFGL++L    +   F   +   GT  +MAPE  ++ P
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 59  ISVKANVFNYGVVLLEIEIVLINWA 83
            + K++V+++GV+L E+  +   W 
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWG 240

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 53/85 (62%), Gaps = 7/85 (8%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I+H ++K  N+L+D+ +T K+ DFGL++L    +  TF   +   GT  +MAPE  ++ P
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 59  ISVKANVFNYGVVLLEIEIVLINWA 83
            + K++V+++GV+L E+  +   W 
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWG 240

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE       S 
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEVVNRQGHSH 209
Query: 62  KANVFNYGVVLLEI 75
            A+ ++YGV++ E+
Sbjct: 210 SADWWSYGVLMFEM 223

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 212
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 213 VDARSDVYSLGCVLYEV 229

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 195
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 196 VDARSDVYSLGCVLYEV 212

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 195
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 196 VDARSDVYSLGCVLYEV 212

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 195
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 196 VDARSDVYSLGCVLYEV 212

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 195
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 196 VDARSDVYSLGCVLYEV 212

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NIL+      K+ DFG+A+ +        +T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI-GTAQYLSPEQARGDS 195
Query: 59  ISVKANVFNYGVVLLEI 75
           +  +++V++ G VL E+
Sbjct: 196 VDARSDVYSLGCVLYEV 212

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+ +D     K+ DFGLA++L  D +   T + GT  YM+PE       + 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNE 195
Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 196 KSDIWSLGCLLYEL 209

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      ++      G+  +MAPE      N 
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V++YG+VL E+
Sbjct: 213 PFSFQSDVYSYGIVLYEL 230

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D+    +ISD GLA  L   QT+T     GT G+MAPE         
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDF 368
Query: 62  KANVFNYGVVLLEI 75
             + F  GV L E+
Sbjct: 369 SVDYFALGVTLYEM 382

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D+    +ISD GLA  L   QT+T     GT G+MAPE         
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDF 368
Query: 62  KANVFNYGVVLLEI 75
             + F  GV L E+
Sbjct: 369 SVDYFALGVTLYEM 382

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D+    +ISD GLA  L   QT+T     GT G+MAPE         
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDF 368
Query: 62  KANVFNYGVVLLEI 75
             + F  GV L E+
Sbjct: 369 SVDYFALGVTLYEM 382

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D+    +ISD GLA  L   QT+T     GT G+MAPE         
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLLGEEYDF 368
Query: 62  KANVFNYGVVLLEI 75
             + F  GV L E+
Sbjct: 369 SVDYFALGVTLYEM 382

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 174 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 230
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 270

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 242
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 236
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 276

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-----SKN 56
           +IH D+KP NIL+DE    K+ DFG++  L+ D+ +  +   G   YMAPE         
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYK-CFIDREFNKLVHDEE 100
               ++A+V++ G+ L  +E+    + YK C  D E    V  EE
Sbjct: 204 PDYDIRADVWSLGISL--VELATGQFPYKNCKTDFEVLTKVLQEE 246

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 242
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 282

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE       + 
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQ 206
Query: 62  KANVFNYGVVLLEI 75
            A+ +++GV++ E+
Sbjct: 207 SADWWSFGVLMFEM 220

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 182 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 238
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 278

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE       + 
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQ 205
Query: 62  KANVFNYGVVLLEI 75
            A+ +++GV++ E+
Sbjct: 206 SADWWSFGVLMFEM 219

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE       + 
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGHTQ 205
Query: 62  KANVFNYGVVLLEI 75
            A+ +++GV++ E+
Sbjct: 206 SADWWSFGVLMFEM 219

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  K +    K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 184
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 185 ADIWSLGITAIEL 197

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   N+L+     AKI DFGLA+ +M D      +++G       +MAPE   +  
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 244
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            +V+++V++YG++L EI  + +N      ++ +F KLV D
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD 284

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  K +    K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 204
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 205 ADIWSLGITAIEL 217

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM--------------PDQTRTFTLIRGTRG 47
           IIH D+  HN L+ E     ++DFGLA+L++              PD+ + +T++ G   
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV-GNPY 187
Query: 48  YMAPEWSKNTPISVKANVFNYGVVLLEI 75
           +MAPE         K +VF++G+VL EI
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEI 215

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+ +D     K+ DFGLA++L  D +     + GT  YM+PE       + 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRMSYNE 195
Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 196 KSDIWSLGCLLYEL 209

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+ +D     K+ DFGLA++L  D+      + GT  YM+PE       + 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNE 195
Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 196 KSDIWSLGCLLYEL 209

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R  + + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
           S  ++++  G ++ ++
Sbjct: 212 SKSSDLWALGCIIYQL 227

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 190 PYSFQSDVYAFGIVLYEL 207

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 190 PYSFQSDVYAFGIVLYEL 207

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 187 PYSFQSDVYAFGIVLYEL 204

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 212 PYSFQSDVYAFGIVLYEL 229

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 185 PYSFQSDVYAFGIVLYEL 202

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 185 PYSFQSDVYAFGIVLYEL 202

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 213 PYSFQSDVYAFGIVLYEL 230

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE      + 
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 189 PYSFQSDVYAFGIVLYEL 206

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNT 57
           IIH DIKP NIL+D     K+ DFG++  L+    +T     G R YMAPE     +   
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQ 204
Query: 58  PISVKANVFNYGVVLLEI 75
              V+++V++ G+ L E+
Sbjct: 205 GYDVRSDVWSLGITLYEL 222

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW---SKNTP 58
           IIH D+KP NIL+DE     I+DF +A +L P +T+  T + GT+ YMAPE     K   
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQ-ITTMAGTKPYMAPEMFSSRKGAG 193
Query: 59  ISVKANVFNYGVVLLEI 75
            S   + ++ GV   E+
Sbjct: 194 YSFAVDWWSLGVTAYEL 210

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEWSKNTP 58
           I+H DIK  NI + +  T ++ DFG+A++L      T  L R   GT  Y++PE  +N P
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVL----NSTVELARACIGTPYYLSPEICENKP 201
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++++  G VL E+
Sbjct: 202 YNNKSDIWALGCVLYEL 218

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+KP NI + +    KI DFGL   L  D  RT +  +GT  YM+PE   +     
Sbjct: 157 LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQDYGK 214
Query: 62  KANVFNYGVVLLEI 75
           + +++  G++L E+
Sbjct: 215 EVDLYALGLILAEL 228

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  + +    K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSK 200
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 201 ADIWSLGITAIEL 213

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +    + GT  +MAPE  K +    K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 184
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 185 ADIWSLGITAIEL 197

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE        
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 185 PYSFQSDVYAFGIVLYEL 202

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +    + GT  +MAPE  K +    K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 199
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 200 ADIWSLGITAIEL 212

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE        
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 205 PYSFQSDVYAFGIVLYEL 222

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE        
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 213 PYSFQSDVYAFGIVLYEL 230

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE      + 
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 201 PYSFQSDVYAFGIVLYEL 218

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE      + 
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 201 PYSFQSDVYAFGIVLYEL 218

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP NIL+D+    +ISD GLA  +   QT    +  GT GYMAPE  KN   + 
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 364
Query: 62  KANVFNYGVVLLEI 75
             + +  G +L E+
Sbjct: 365 SPDWWALGCLLYEM 378

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP NIL+D+    +ISD GLA  +   QT    +  GT GYMAPE  KN   + 
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV--GTVGYMAPEVVKNERYTF 364
Query: 62  KANVFNYGVVLLEI 75
             + +  G +L E+
Sbjct: 365 SPDWWALGCLLYEM 378

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 195
Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMAIEM 209

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  N+L+ E    K++DFG+A  L   Q +    + GT  +MAPE  K +    K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFK 196
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 197 ADIWSLGITAIEL 209

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R  + + GT  Y++PE       
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 208
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 209 CKSSDLWALGCIIYQL 224

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L   +DE     ISDFGL+K  M D     +   GT GY+APE     P
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 195 YSKAVDCWSIGVI 207

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNT 57
           +IH D+KP N+L++     K+ DFG++  L+ D  +      G + YMAPE         
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPELNQK 188
Query: 58  PISVKANVFNYGVVLLEIEIV 78
             SVK+++++ G+ ++E+ I+
Sbjct: 189 GYSVKSDIWSLGITMIELAIL 209

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R  + + GT  Y++PE       
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKSA 212
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 213 CKSSDLWALGCIIYQL 228

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+D+    KI+DFG AK + PD T       GT  Y+APE     P + 
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYXLC---GTPDYIAPEVVSTKPYNK 182
Query: 62  KANVFNYGVVLLEI 75
             + +++G+++ E+
Sbjct: 183 SIDWWSFGILIYEM 196

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L   +DE     ISDFGL+K  M D     +   GT GY+APE     P
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 195 YSKAVDCWSIGVI 207

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L   +DE     ISDFGL+K  M D     +   GT GY+APE     P
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 195 YSKAVDCWSIGVI 207

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQYVSPELLTEKSA 209
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 210 CKSSDLWALGCIIYQL 225

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 212 XKSSDLWALGCIIYQL 227

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L   +DE     ISDFGL+K  M D     +   GT GY+APE     P
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 195 YSKAVDCWSIGVI 207

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNT 57
           +IH D+KP N+L++     K+ DFG++  L+    +T     G + YMAPE         
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA--GCKPYMAPERINPELNQK 232
Query: 58  PISVKANVFNYGVVLLEIEIVLINW 82
             SVK+++++ G+ ++E+ I+   +
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPY 257

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 187
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 188 CKSSDLWALGCIIYQL 203

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 193
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 194 CKSSDLWALGCIIYQL 209

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 186
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 187 CKSSDLWALGCIIYQL 202

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 208
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 209 CKSSDLWALGCIIYQL 224

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 188
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 189 CKSSDLWALGCIIYQL 204

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 189
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 190 CKSSDLWALGCIIYQL 205

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 205 YTKSIDIWSVGCILAEM 221

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 212 CKSSDLWALGCIIYQL 227

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 216
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 217 CKSSDLWALGCIIYQL 232

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 210 CKSSDLWALGCIIYQL 225

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 212 CKSSDLWALGCIIYQL 227

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 210 CKSSDLWALGCIIYQL 225

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 212 CKSSDLWALGCIIYQL 227

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 209
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 210 CKSSDLWALGCIIYQL 225

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 212
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 213 CKSSDLWALGCIIYQL 228

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 211
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 212 CKSSDLWALGCIIYQL 227

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD--QTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NIL++E    +I+DFG AK+L P+  Q R    + GT  Y++PE       
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKSA 214
Query: 60  SVKANVFNYGVVLLEI 75
              ++++  G ++ ++
Sbjct: 215 CKSSDLWALGCIIYQL 230

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 184 AEPVDVWSCGIVL 196

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 205 YTKSIDIWSVGCILAEM 221

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L+    +    K++DFGLA  +  DQ   F    GT GY++PE  +  P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLRKDP 182
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 183 YGKPVDMWACGVILY---ILLV--GYPPFWDEDQHRL 214

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 205 YTKSIDIWSVGCILAEM 221

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 205 YTKSIDIWSVGCILAEM 221

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 207 YTKSIDIWSVGCILAEM 223

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 207 YTKSIDIWSVGCILAEM 223

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 225 YTKSIDIWSVGCILAEM 241

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 210 YTKSIDIWSVGCILAEM 226

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 203 YTKSIDIWSVGCILAEM 219

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L+    +    K++DFGLA  +  DQ   F    GT GY++PE  +  P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLRKDP 182
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 183 YGKPVDMWACGVILY---ILLV--GYPPFWDEDQHRL 214

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 211 YTKSIDIWSVGCILAEM 227

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 202 YTKSIDIWSVGCILAEM 218

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 213 YTKSIDIWSVGCILAEM 229

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 205 YTKSIDIWSVGCILAEM 221

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 203 YTKSIDIWSVGCILAEM 219

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 207 YTKSIDIWSVGCILAEM 223

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 209 YTKSIDIWSVGCILAEM 225

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 210 YTKSIDIWSVGCILAEM 226

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE   N+  
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 225 YTKSIDIWSVGCILAEM 241

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           +H D+   N+L+      KI DFGLA+ +M D      ++RG       +MAPE      
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---YVVRGNARLPVKWMAPESLFEGI 250
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
            ++K++V++YG++L EI  + +N      +D  F KL+ +
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN 290

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 186 AEPVDVWSCGIVL 198

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH +IK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 196
Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 197 KVDIWSLGIMAIEM 210

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP N+L+DE    KISDFGLA +    ++ R    + GT  Y+APE  K     
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 61  VK-ANVFNYGVVL 72
            +  +V++ G+VL
Sbjct: 185 AEPVDVWSCGIVL 197

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++   ++ GT  +MAPE         
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGP 196
Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 197 KVDIWSLGIMAIEM 210

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++   ++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGP 195
Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMAIEM 209

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   TFT   G +    + APE      
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TFTAHAGAKFPIKWTAPESLAYNK 186
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 187 FSIKSDVWAFGVLLWEI 203

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++   ++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGP 195
Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMAIEM 209

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L+    +    K++DFGLA  +  +Q   F    GT GY++PE  +  P
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-GTPGYLSPEVLRKDP 209
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + +KL
Sbjct: 210 YGKPVDIWACGVILY---ILLV--GYPPFWDEDQHKL 241

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 182
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 183 TIKSDVWSFGILLTEI 198

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 193 TIKSDVWSFGILLTEI 208

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 187
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 188 TIKSDVWSFGILLTEI 203

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 185 KSDVWSFGVLMWEV 198

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 193
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 194 TIKSDVWSFGILLTEI 209

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 182 KSDVWSFGVLMWEV 195

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 187 KSDVWSFGVLMWEV 200

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 184 KSDVWSFGVLMWEV 197

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 191 SDVWSFGILLTEI 203

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 192 SDVWSFGILLTEI 204

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 204 KSDVWSFGVLMWEV 217

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+   +   +T   G +    + APE       
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTF 197
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 198 TIKSDVWSFGILLTEI 213

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
            +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K    
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAY 368
Query: 60  SVKANVFNYGVVLLEI 75
              A+ F+ G +L ++
Sbjct: 369 DSSADWFSLGCMLFKL 384

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
            +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K    
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAY 368
Query: 60  SVKANVFNYGVVLLEI 75
              A+ F+ G +L ++
Sbjct: 369 DSSADWFSLGCMLFKL 384

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
            +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K    
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAY 368
Query: 60  SVKANVFNYGVVLLEI 75
              A+ F+ G +L ++
Sbjct: 369 DSSADWFSLGCMLFKL 384

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 184 KSDVWSFGVLMWEV 197

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
            +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K    
Sbjct: 311 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAY 367
Query: 60  SVKANVFNYGVVLLEI 75
              A+ F+ G +L ++
Sbjct: 368 DSSADWFSLGCMLFKL 383

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 193 SDVWSFGILLTEI 205

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNT 207
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 208 FSIKSDVWAFGVLLWEI 224

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 191 SDVWSFGILLTEI 203

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 200 SDVWSFGILLTEI 212

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 201
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 202 FSIKSDVWAFGVLLWEI 218

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 190
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 191 FSIKSDVWAFGVLLWEI 207

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 190
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 191 FSIKSDVWAFGVLLWEI 207

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAYNK 189
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 190 FSIKSDVWAFGVLLWEI 206

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 197 SDVWSFGILLTEI 209

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 188
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 193
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 194 FSIKSDVWAFGVLLWEI 210

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 193
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 194 FSIKSDVWAFGVLLWEI 210

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 199 SDVWSFGILLTEI 211

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 193
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 194 FSIKSDVWAFGVLLWEI 210

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L    DE     ISDFGL+K  M  +    +   GT GY+APE     P
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSK--MEGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 199 YSKAVDCWSIGVI 211

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 193
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 194 FSIKSDVWAFGVLLWEI 210

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAYNK 190
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 191 FSIKSDVWAFGVLLWEI 207

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGLA++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-- 59
           I H D+KP NILMD+    K+SDFG ++ ++  + +     RGT  +M PE+  N     
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG---SRGTYEFMPPEFFSNESSYN 229
Query: 60  SVKANVFNYGVVL 72
             K ++++ G+ L
Sbjct: 230 GAKVDIWSLGICL 242

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP--DQTRTFTLIRGTRGYMAPEWSKNTPI 59
           ++H D+KP N+L++     KI DFGLA++  P  D T   T    TR Y APE   N+  
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 60  SVKA-NVFNYGVVLLEI 75
             K+ ++++ G +L E+
Sbjct: 225 YTKSIDIWSVGCILAEM 241

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 358
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 358
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 358
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 2   IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           ++H D+KP NIL  +       KI DFGLA+L   D+  T     GT  YMAPE  K   
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTALYMAPEVFKRD- 201
Query: 59  ISVKANVFNYGVVL 72
           ++ K ++++ GVV+
Sbjct: 202 VTFKCDIWSAGVVM 215

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            IH D+   N L+ E    K++DFGL++L+  D   T+T   G +    + APE      
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNK 192
Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 193 FSIKSDVWAFGVLLWEI 209

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 441
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 442 TIKSDVWSFGILLTEL 457

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H DIKP N+ +      K+ D GL +      T   +L+ GT  YM+PE       + 
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 215
Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 216 KSDIWSLGCLLYEM 229

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 185
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 186 TIKSDVWSFGILLTEL 201

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 189
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 190 TIKSDVWSFGILLTEL 205

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 182 TIKSDVWSFGILLTEL 197

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    ++SDFG +  L P +      + GT GY+APE
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPE 269

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 184 TIKSDVWSFGILLTEL 199

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  N+L+ E    KI+DFGLA+++   +   +T   G +    + APE       
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 60  SVKANVFNYGVVLLEI 75
           ++K+NV+++G++L EI
Sbjct: 188 TIKSNVWSFGILLYEI 203

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           ++H D+KP N+L+    +    K++DFGLA  +  DQ   F    GT GY++PE  +   
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA-GTPGYLSPEVLRKEA 182
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + +KL
Sbjct: 183 YGKPVDIWACGVILY---ILLV--GYPPFWDEDQHKL 214

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 62  KANVFNYGVVLLEI 75
           K++V+ +GV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 62  KANVFNYGVVLLEI 75
           K++V+ +GV+L EI
Sbjct: 190 KSDVWAFGVLLWEI 203

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D++  NIL+ E    K++DFGLA+L+  ++       +    + APE +     ++K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L E+
Sbjct: 186 SDVWSFGILLTEL 198

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 62  KANVFNYGVVLLEI 75
           K++V+ +GV+L EI
Sbjct: 193 KSDVWAFGVLLWEI 206

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +I+ D+KP NI + +    KI DFGL   L  D  R  +  +GT  YM+PE   +     
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRYMSPEQISSQDYGK 200
Query: 62  KANVFNYGVVLLEI 75
           + +++  G++L E+
Sbjct: 201 EVDLYALGLILAEL 214

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 44/73 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D++  NIL+ E    K++DFGLA+L+  ++       +    + APE +     ++K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L E+
Sbjct: 196 SDVWSFGILLTEL 208

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 195
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 196 RKFTSASDVWSYGIVLWEV 214

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+ +  + KI+DFGLA+L+   +       +    + APE       ++K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 191 SDVWSFGILLTEI 203

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 195
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 196 RKFTSASDVWSYGIVLWEV 214

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 62  KANVFNYGVVLLEI 75
           K++V+ +GV+L EI
Sbjct: 197 KSDVWAFGVLLWEI 210

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 157 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 212
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 213 RKFTSASDVWSYGIVLWEV 231

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-------------MPDQTRTFTLIRGTRGY 48
           IIH D+KP NI +DE    KI DFGLAK +             +P  +   T   GT  Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 49  MAPEWSKNTP-ISVKANVFNYGVVLLEI 75
           +A E    T   + K ++++ G++  E+
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-------------MPDQTRTFTLIRGTRGY 48
           IIH D+KP NI +DE    KI DFGLAK +             +P  +   T   GT  Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 49  MAPEWSKNTP-ISVKANVFNYGVVLLEI 75
           +A E    T   + K ++++ G++  E+
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEM 224

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   S
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGD-TRLPLKWMAPESIFDKIYS 279
Query: 61  VKANVFNYGVVLLEI 75
            K++V++YGV+L EI
Sbjct: 280 TKSDVWSYGVLLWEI 294

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-SKNTPI 59
           ++H DIK  NIL+D     AK+ DFG   LL       +T   GTR Y  PEW S++   
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDGTRVYSPPEWISRHQYH 216
Query: 60  SVKANVFNYGVVLLEI 75
           ++ A V++ G++L ++
Sbjct: 217 ALPATVWSLGILLYDM 232

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGL K     Q      ++    + APE  +    S 
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREAAFST 184
Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 185 KSDVWSFGILLWEI 198

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 2   IIHCDIKPHNILMDEFWTA-KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +IH D+KP N+L+    T  KI DFG A     D     T  +G+  +MAPE  + +  S
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 61  VKANVFNYGVVLLEI 75
            K +VF++G++L E+
Sbjct: 182 EKCDVFSWGIILWEV 196

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG   P  W+    I+ 
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 222
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 223 RKFTSASDVWSYGIVLWEV 241

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH +++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 183
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 184 TIKSDVWSFGILLTEI 199

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 2   IIHCDIKPHNILMDEFWTA-KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +IH D+KP N+L+    T  KI DFG A     D     T  +G+  +MAPE  + +  S
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 61  VKANVFNYGVVLLEI 75
            K +VF++G++L E+
Sbjct: 183 EKCDVFSWGIILWEV 197

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGLA+L+  ++   +T  +G +    + APE +     
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTARQGAKFPIKWTAPEAALYGRF 189
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 190 TIKSDVWSFGILLTEL 205

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+      KI+DFGLA+++   +   +T   G +    + APE       
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L+EI
Sbjct: 190 TIKSDVWSFGILLMEI 205

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-EWSKNTPISV 61
           +H D+   NIL++     K+SDFGL ++L  D    +T    TRG   P  W+    I+ 
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224
Query: 62  K-----ANVFNYGVVLLEI 75
           +     ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   NIL+ E    K++DFGLA+L+   +   +T  +G +    + APE +     
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-----------GTRGYMA 50
           ++H D+KP NI        K+ DFGL   +  D+     L             GT+ YM+
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198
Query: 51  PEWSKNTPISVKANVFNYGVVLLEI 75
           PE       S K ++F+ G++L E+
Sbjct: 199 PEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW----SKNT 57
           +IH D+KP N+L++     K  DFG++  L+ D  +      G + Y APE         
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA--GCKPYXAPERINPELNQK 215
Query: 58  PISVKANVFNYGVVLLEIEIV 78
             SVK+++++ G+  +E+ I+
Sbjct: 216 GYSVKSDIWSLGITXIELAIL 236

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           +H D+   NIL++     KI+DFGLAKLL  D+        G     + APE   +   S
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFS 192
Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GVVL E+
Sbjct: 193 RQSDVWSFGVVLYEL 207

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D+   N+L+ E   AK+SDFGL K     Q      ++ T    APE  +    S K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 366
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 367 SDVWSFGILLWEI 379

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+      KI+DFGLA+++  ++   +T   G +    + APE       
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGSF 362
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L+EI
Sbjct: 363 TIKSDVWSFGILLMEI 378

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ--TRTFTLIRGTRGYMAPEWSKNTPI 59
           II+ D+K  N+++D     KI+DFG+ K  M D   TR F    GT  Y+APE     P 
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC---GTPDYIAPEIIAYQPY 197
Query: 60  SVKANVFNYGVVLLEI 75
               + + YGV+L E+
Sbjct: 198 GKSVDWWAYGVLLYEM 213

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           ++H D+KP N+L+    +    K++DFGLA  +  +Q   F    GT GY++PE  +  P
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLRKDP 200
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 201 YGKPVDLWACGVILY---ILLV--GYPPFWDEDQHRL 232

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGL K     Q      ++ T    APE  +    S 
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFST 193
Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 194 KSDVWSFGILLWEI 207

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
           +++H D+KP N+L+D    AKI+DFGL+ ++   +    +   G+  Y APE  S     
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYA 193
Query: 60  SVKANVFNYGVVL 72
             + ++++ GV+L
Sbjct: 194 GPEVDIWSSGVIL 206

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D++  NIL+ E    K++DFGL +L+  ++   +T  +G +    + APE +     
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNE---YTARQGAKFPIKWTAPEAALYGRF 359
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L E+
Sbjct: 360 TIKSDVWSFGILLTEL 375

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGL K     Q      ++ T    APE  +    S 
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFST 178
Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 179 KSDVWSFGILLWEI 192

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L    +E     I+DFGL+K+   +Q    +   GT GY+APE     P
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 59  ISVKANVFNYGVV 71
            S   + ++ GV+
Sbjct: 184 YSKAVDCWSIGVI 196

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  N+L+ E    KI+DFGLA+++   +   +T   G +    + APE       
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 189 TIKSDVWSFGILLYEI 204

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 18/88 (20%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I+H D+KP+N+L+DE    K++DFGLAK    P++     ++  TR Y APE      + 
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPE------LL 184
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFI 88
             A ++  GV +         WA  C +
Sbjct: 185 FGARMYGVGVDM---------WAVGCIL 203

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH ++   N L+ E    K++DFGL++L+  D   T+T   G +    + APE       
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 60  SVKANVFNYGVVLLEI 75
           S+K++V+ +GV+L EI
Sbjct: 436 SIKSDVWAFGVLLWEI 451

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFGL+++L  D    +T    TRG      + APE    
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAF 201
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+V+ E+
Sbjct: 202 RKFTSASDVWSYGIVMWEV 220

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT---RGYMAPEWSKNTPI 59
           +H D+   N+L+D     K+SDFGL+++L  D    +T   G    R + APE       
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR-WTAPEAIAFRTF 231
Query: 60  SVKANVFNYGVVLLEI 75
           S  ++V+++GVV+ E+
Sbjct: 232 SSASDVWSFGVVMWEV 247

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 2   IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP NIL+   +     KI DFG+++ +          I GT  Y+APE     P
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEILNYDP 209
Query: 59  ISVKANVFNYGVV 71
           I+   +++N G++
Sbjct: 210 ITTATDMWNIGII 222

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH ++   N L+ E    K++DFGL++L+  D   T+T   G +    + APE       
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 60  SVKANVFNYGVVLLEI 75
           S+K++V+ +GV+L EI
Sbjct: 397 SIKSDVWAFGVLLWEI 412

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFG++++L  D    +T    TRG      + APE    
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAY 187
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+V+ E+
Sbjct: 188 RKFTSASDVWSYGIVMWEV 206

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFG++++L  D    +T    TRG      + APE    
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAY 193
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+V+ E+
Sbjct: 194 RKFTSASDVWSYGIVMWEV 212

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP NILMD     +++DFG    LM D T   ++  GT  Y++PE
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH D++  NIL+      KI+DFGLA+L+  ++       +    + APE +     ++K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L E+
Sbjct: 187 SDVWSFGILLTEL 199

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NI+++     K++DFGL K  + D T T T   GT  YMAPE
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPE 191

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R  TL  GT  Y+APE       S 
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSF 196
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 197 EVDVWSIGCIM 207

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFG++++L  D    +T    TRG      + APE    
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT----TRGGKIPIRWTAPEAIAY 208
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+V+ E+
Sbjct: 209 RKFTSASDVWSYGIVMWEV 227

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R  TL  GT  Y+APE       S 
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSF 196
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 197 EVDVWSIGCIM 207

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP NI +      K+ DFGL  L+         +  G   YMAPE  + +    
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGS-YGT 234
Query: 62  KANVFNYGVVLLEI 75
            A+VF+ G+ +LE+
Sbjct: 235 AADVFSLGLTILEV 248

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-----------GTRGYMA 50
           ++H D+KP NI        K+ DFGL   +  D+     L             GT+ YM+
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 51  PEWSKNTPISVKANVFNYGVVLLEI 75
           PE       S K ++F+ G++L E+
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R  TL  GT  Y+APE       S 
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC-GTPNYIAPEVLSKKGHSF 200
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 201 EVDVWSIGCIM 211

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           +H D+   NIL++     KI+DFGLAKLL  D+        G     + APE   +   S
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GVVL E+
Sbjct: 209 RQSDVWSFGVVLYEL 223

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 148 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKD 203
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 204 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 244

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           +H D+   NIL++     KI+DFGLAKLL  D+        G     + APE   +   S
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GVVL E+
Sbjct: 196 RQSDVWSFGVVLYEL 210

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +  + +  +    GT GY++PE  K  P
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
            S   +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 184 YSKPVDIWACGVILY---ILLV--GYPPFWDEDQHRL 215

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           +H D+   NIL++     KI+DFGLAKLL  D+        G     + APE   +   S
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GVVL E+
Sbjct: 197 RQSDVWSFGVVLYEL 211

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 151 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKD 206
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 207 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 247

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 224
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREFNK 94
           ++++V+++GV+L EI  +  +      ID EF +
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR 258

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +H D+   N+L+D     K+SDFGL+++L   PD   T T  +    + APE       S
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
Query: 61  VKANVFNYGVVLLEI 75
             ++V+++GVV+ E+
Sbjct: 233 SASDVWSFGVVMWEV 247

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 151 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMAPESLKD 206
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 207 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 247

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPIS 60
           +H D+   NIL++     K+SDFGL++++  D    +T   G     + APE  +    +
Sbjct: 167 VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
Query: 61  VKANVFNYGVVLLEI 75
             ++V++YG+V+ E+
Sbjct: 227 SASDVWSYGIVMWEV 241

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +  + +  +    GT GY++PE  K  P
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
            S   +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 184 YSKPVDIWACGVILY---ILLV--GYPPFWDEDQHRL 215

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 326
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 327 EVDIWSLGIMVIEM 340

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPE-WSKNTP 58
           +++H D+KP N+L+D    AKI+DFGL+ ++   +  RT     G+  Y APE  S    
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGRLY 187
Query: 59  ISVKANVFNYGVVL 72
              + ++++ GV+L
Sbjct: 188 AGPEVDIWSCGVIL 201

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +  + +  +    GT GY++PE  K  P
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
            S   +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 183 YSKPVDIWACGVILY---ILLV--GYPPFWDEDQHRL 214

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTR---GYMAPEWSKNTP 58
           +H D+   NIL++     K+SDFGL++ L  D +  T+T   G +    + APE  +   
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 59  ISVKANVFNYGVVLLEI 75
            +  ++V++YG+V+ E+
Sbjct: 217 FTSASDVWSYGIVMWEV 233

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGL-AKLLMPDQTRTFTLIRGTRGYMAP-----EWSK 55
           IIH D+K  N+LM      +++DFG+ AK L   Q R   +  GT  +MAP     E  K
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMK 195
Query: 56  NTPISVKANVFNYGVVLLEI 75
           +TP   KA++++ G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGL-AKLLMPDQTRTFTLIRGTRGYMAP-----EWSK 55
           IIH D+K  N+LM      +++DFG+ AK L   Q R   +  GT  +MAP     E  K
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMK 187
Query: 56  NTPISVKANVFNYGVVLLEI 75
           +TP   KA++++ G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 144 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKD 199
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 200 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 240

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ ++  +  +     G +    +MA E  +   
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 215 FTTKSDVWSFGVLLWEL 231

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    K++DFG +  L P +      + GT  Y+APE
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLRSVCGTPSYLAPE 193

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 151 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLPVRWMAPESLKD 206
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 207 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 247

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +  + +  +    GT GY++PE  K  P
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
            S   +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 207 YSKPVDIWACGVILY---ILLV--GYPPFWDEDQHRL 238

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           I+H D+KP N+L+DE    KI+DFGL+  +M D     T   G+  Y APE  S      
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 191
Query: 61  VKANVFNYGVVL 72
            + +V++ GV+L
Sbjct: 192 PEVDVWSCGVIL 203

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    K++DFG +  L P +      + GT  Y+APE
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPE 180

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-------------MPDQTRTFTLIRGTRGY 48
           IIH ++KP NI +DE    KI DFGLAK +             +P  +   T   GT  Y
Sbjct: 137 IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXY 196
Query: 49  MAPEWSKNTP-ISVKANVFNYGVVLLE 74
           +A E    T   + K + ++ G++  E
Sbjct: 197 VATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           I+H D+KP N+L+DE    KI+DFGL+  +M D     T   G+  Y APE  S      
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 190
Query: 61  VKANVFNYGVVL 72
            + +V++ GV+L
Sbjct: 191 PEVDVWSCGVIL 202

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 140 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 199
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 200 VASDVWSFGVVLYEL 214

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR----GTRGYMAPE-WSKNT 57
           IH D+K  NIL+ E  + +I+DFG++  L      T   +R    GT  +MAPE   +  
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 58  PISVKANVFNYGVVLLEI 75
               KA+++++G+  +E+
Sbjct: 203 GYDFKADIWSFGITAIEL 220

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 213 FTTKSDVWSFGVLLWEL 229

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR----GTRGYMAPEWSKNT- 57
           IH D+K  NIL+ E  + +I+DFG++  L      T   +R    GT  +MAPE  +   
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 58  PISVKANVFNYGVVLLEI 75
               KA+++++G+  +E+
Sbjct: 198 GYDFKADIWSFGITAIEL 215

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVRWMSPESLKD 208
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 209 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 249

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPIS 60
           +H D+   NIL++     K+SDFGL+++L  D   T+T   G     + APE       +
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
Query: 61  VKANVFNYGVVLLEI 75
             ++V+++G+V+ E+
Sbjct: 229 SASDVWSFGIVMWEV 243

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 199 VASDVWSFGVVLYEL 213

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 199 VASDVWSFGVVLYEL 213

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           I+H D+KP N+L+DE    KI+DFGL+  +M D     T   G+  Y APE  S      
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPEVISGKLYAG 185
Query: 61  VKANVFNYGVVL 72
            + +V++ GV+L
Sbjct: 186 PEVDVWSCGVIL 197

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 135 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 194
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 195 VASDVWSFGVVLYEL 209

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 134 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 193
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 194 VASDVWSFGVVLYEL 208

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 196 VASDVWSFGVVLYEL 210

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           I+H D+KP N+L+DE    KI+DFGL+ ++        +   G+  Y APE  S      
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--GSPNYAAPEVISGKLYAG 181
Query: 61  VKANVFNYGVVL 72
            + +V++ GV+L
Sbjct: 182 PEVDVWSCGVIL 193

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    K++DFG +  L P +      + GT  Y+APE
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPE 193

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 195
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 196 VASDVWSFGVVLYEL 210

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 141 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 200
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 201 VASDVWSFGVVLYEL 215

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 142 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 201
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 202 VASDVWSFGVVLYEL 216

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 139 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 198
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 199 VASDVWSFGVVLYEL 213

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 214 VASDVWSFGVVLYEL 228

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 167 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 226
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 227 VASDVWSFGVVLYEL 241

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 143 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 202
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 203 VASDVWSFGVVLYEL 217

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 219
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH D+   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 154 IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFS 213
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 214 VASDVWSFGVVLYEL 228

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-----EWSKN 56
           IIH D+K  NIL       K++DFG++        R  + I GT  +MAP     E SK+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKD 214
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   KA+V++ G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 219
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-----EWSKN 56
           IIH D+K  NIL       K++DFG++        R  + I GT  +MAP     E SK+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKD 214
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   KA+V++ G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-SKNTPI 59
           + H DIKPHN+L++E   T K+ DFG AK L P +     +   +R Y APE    N   
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRYYRAPELIFGNQHY 209
Query: 60  SVKANVFNYGVVLLEI 75
           +   ++++ G +  E+
Sbjct: 210 TTAVDIWSVGCIFAEM 225

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 1   LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
           +++H D+KP N+L+D    AKI+DFGL+ ++   +    +   G+  Y APE  S     
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYA 188
Query: 60  SVKANVFNYGVVL 72
             + ++++ GV+L
Sbjct: 189 GPEVDIWSCGVIL 201

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 192 SSKSDVWSFGVLMWE 206

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 265
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 266 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 297

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 230
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 231 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 262

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 188 SSKSDVWSFGVLMWE 202

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 229 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 260

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 214 FTTKSDVWSFGVLLWEL 230

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 151 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKD 206
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 207 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 247

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 224
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 225 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 256

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 211 FTTKSDVWSFGVLLWEL 227

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 214 FTTKSDVWSFGVLLWEL 230

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 205
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 206 FTTKSDVWSFGVLLWEL 222

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 209 FTTKSDVWSFGVLLWEL 225

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 213 FTTKSDVWSFGVLLWEL 229

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 191
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 192 SSKSDVWSFGVLMWE 206

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 197
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 198 SSKSDVWSFGVLMWE 212

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 212 FTTKSDVWSFGVLLWEL 228

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 150 FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKD 205
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 206 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 246

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 219
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 280
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 281 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 208 SSKSDVWSFGVLMWE 222

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 207
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 208 SSKSDVWSFGVLMWE 222

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 204
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 205 EVDIWSLGIMVIEM 218

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 185
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 186 SSKSDVWSFGVLMWE 200

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 278
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 279 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTPI 59
           IH D+   NIL++     KI DFGL K+L P     F +         + APE    +  
Sbjct: 136 IHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 60  SVKANVFNYGVVLLEI 75
           SV ++V+++GVVL E+
Sbjct: 195 SVASDVWSFGVVLYEL 210

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 273
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 274 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 219
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 220 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 251

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 233 FTTKSDVWSFGVLLWEL 249

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IH D+   NIL+ E    KI DFGLA+ +   PD  R     R    +MAPE   +   +
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 271
Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREF 92
           ++++V+++GV+L EI  +  +      ID EF
Sbjct: 272 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 195
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 196 EVDIWSLGIMVIEM 209

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 199
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 200 EVDIWSLGIMVIEM 213

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 232 FTTKSDVWSFGVLLWEL 248

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           IH DIK  NIL++    AK++DFG+A  L     +   +I GT  +MAPE  +    +  
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCV 205
Query: 63  ANVFNYGVVLLEI 75
           A++++ G+  +E+
Sbjct: 206 ADIWSLGITAIEM 218

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ ++  +  +    R  R    + A E  +   
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 205 FTTKSDVWSFGVLLWEL 221

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 206
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 207 EVDIWSLGIMVIEM 220

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 207
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 208 GVFTTYSDVWSFGVVLWEI 226

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+        G     + APE       
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 205
Query: 60  SVKANVFNYGVVLLE 74
           S K++V+++GV++ E
Sbjct: 206 SSKSDVWSFGVLMWE 220

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 146 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 201
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 202 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 242

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 214
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 215 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 255

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++    +    KI D G AK L  DQ    T   GT  Y+APE  +   
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKK 200
Query: 59  ISVKANVFNYGVVLLE 74
            +V  + +++G +  E
Sbjct: 201 YTVTVDYWSFGTLAFE 216

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 207
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 208 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 248

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++    +    KI D G AK L  DQ    T   GT  Y+APE  +   
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLEQKK 199
Query: 59  ISVKANVFNYGVVLLE 74
            +V  + +++G +  E
Sbjct: 200 YTVTVDYWSFGTLAFE 215

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 208
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 209 GVFTTYSDVWSFGVVLWEI 227

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 212 FTTKSDVWSFGVLLWEL 228

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 214
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 215 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 255

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 150 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 205
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 206 GVFTTYSDVWSFGVVLWEI 224

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+TL  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPE 209

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 214 FTTKSDVWSFGVLLWEL 230

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 181 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 236
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 237 GVFTTYSDVWSFGVVLWEI 255

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N ++ E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 149 FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 204
Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 205 GVFTTYSDVWSFGVVLWEI 223

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R   L  GT  Y+APE       S 
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHSF 194
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 195 EVDVWSIGCIM 205

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 215 FTTKSDVWSFGVLLWEL 231

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+TL  GT  Y+APE
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPE 194

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAP-----EWSKN 56
           IIH D+K  NIL       K++DFG++        R    I GT  +MAP     E SK+
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKD 214
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   KA+V++ G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLM--PDQTRTF-TLIRGTRGYMAPE 52
           +IH D+KP N+L++E    KI DFG+A+ L   P + + F T    TR Y APE
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 214 FTTKSDVWSFGVLLWEL 230

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 219 FTTKSDVWSFGVLLWEL 235

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N L+++    K+SDFGL++ ++ D+   +T  RG++    +  PE    + 
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSK 182
Query: 59  ISVKANVFNYGVVLLEI 75
            S K++++ +GV++ EI
Sbjct: 183 FSSKSDIWAFGVLMWEI 199

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  R   L+ GT  +MAPE     P   
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 249
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 250 EVDIWSLGIMVIEM 263

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+   N+L+      KI+DFGLA  L     + +TL  GT  Y++PE +  +   +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTPNYISPEIATRSAHGL 191
Query: 62  KANVFNYGVVLLEI-----------------EIVLINWAYKCFIDREFNKLVHD 98
           +++V++ G +   +                 ++VL ++    F+  E   L+H 
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ 245

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGT--RGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D +       G     + APE       
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 60  SVKANVFNYGVVLLE 74
           S +++V++YGV + E
Sbjct: 191 SSRSDVWSYGVTMWE 205

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NI+++     K++DFGL K  + D T T     GT  YMAPE
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC-GTIEYMAPE 191

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R   L  GT  Y+APE       S 
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHSF 218
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 219 EVDVWSIGCIM 229

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +  +     G +    +MA E  +   
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 273 FTTKSDVWSFGVLLWEL 289

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFGLAK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ ++E    KI DFGLA  +  D  R   L  GT  Y+APE       S 
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPEVLSKKGHSF 220
Query: 62  KANVFNYGVVL 72
           + +V++ G ++
Sbjct: 221 EVDVWSIGCIM 231

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPIS 60
           +H D+   N+L+     AKISDFGL+K L  D+   +  T  +    + APE       S
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 61  VKANVFNYGVVLLE 74
            K++V+++GV++ E
Sbjct: 551 SKSDVWSFGVLMWE 564

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPIS 60
           +H D+   N+L+     AKISDFGL+K L  D+   +  T  +    + APE       S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 61  VKANVFNYGVVLLE 74
            K++V+++GV++ E
Sbjct: 552 SKSDVWSFGVLMWE 565

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 2   IIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I+H DIKP NI+ +  +  + KI DFGLA  L PD+    T    T  + APE     P+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPV 227
Query: 60  SVKANVFNYGVV 71
               +++  GV+
Sbjct: 228 GFYTDMWAIGVL 239

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 2   IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           ++H ++KP N+L+         K++DFGLA  +  +Q   F    GT GY++PE  +  P
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLRKDP 189
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
                +++  GV+L    I+L+   Y  F D + ++L
Sbjct: 190 YGKPVDLWACGVILY---ILLV--GYPPFWDEDQHRL 221

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+D     K+SDFG+ + ++ DQ  +    +    + APE       S 
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 62  KANVFNYGVVLLEI 75
           K++V+ +G+++ E+
Sbjct: 185 KSDVWAFGILMWEV 198

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 2   IIHCDIKPHNILMDEFWTA-KISDFGLAKLLMPDQ--TRTFTLIRGTRGYMAPEWSKNTP 58
           I+H DIK  N+L++ +    KISDFG +K L      T TFT   GT  YMAPE     P
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGP 199
Query: 59  --ISVKANVFNYGVVLLEI 75
                 A++++ G  ++E+
Sbjct: 200 RGYGKAADIWSLGCTIIEM 218

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL--MPDQTRTF-TLIRGTRGYMAPE 52
           +IH D+KP N+L++E    KI DFG+A+ L   P + + F T    TR Y APE
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+DE    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 195

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 2   IIHCDIKPHNILMDEFWTA-KISDFGLAKLLMPDQ--TRTFTLIRGTRGYMAPEWSKNTP 58
           I+H DIK  N+L++ +    KISDFG +K L      T TFT   GT  YMAPE     P
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGP 185
Query: 59  --ISVKANVFNYGVVLLEI 75
                 A++++ G  ++E+
Sbjct: 186 RGYGKAADIWSLGCTIIEM 204

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N  + E +T KI DFG+ +    D   T    +G +G     +M+PE  K+
Sbjct: 146 FVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKD 201
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++V+++GVVL EI   L    Y+   + +  + V +
Sbjct: 202 GVFTTYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVME 242

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP N+L+   +     K+ DFG+A  L          + GT  +MAPE  K  P
Sbjct: 151 IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREP 209
Query: 59  ISVKANVFNYGVVLL 73
                +V+  GV+L 
Sbjct: 210 YGKPVDVWGCGVILF 224

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+K  N+++D     KI+DFG+ K  + D   T     GT  Y+APE     P   
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC-GTPDYIAPEIIAYQPYGK 521
Query: 62  KANVFNYGVVLLEI 75
             + + +GV+L E+
Sbjct: 522 SVDWWAFGVLLYEM 535

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ DIK  NIL+D      ++DFGL+K  + D+T       GT  YMAP+  +      
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 62  KANV--FNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLEN 108
              V  ++ GV++ E    L+  A    +D E N      E++++ L++
Sbjct: 240 DKAVDWWSLGVLMYE----LLTGASPFTVDGEKNSQA---EISRRILKS 281

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 3   IHCDIKPHNILMDEFWT--AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +H D+KP NI+     +   K+ DFGL   L P Q+   T   GT  + APE ++  P+ 
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVG 228
Query: 61  VKANVFNYGVV 71
              ++++ GV+
Sbjct: 229 YYTDMWSVGVL 239

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+KP NIL+D      ++DFGL K  +   + T T   GT  Y+APE     P   
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC-GTPEYLAPEVLHKQPYDR 218
Query: 62  KANVFNYGVVLLEI 75
             + +  G VL E+
Sbjct: 219 TVDWWCLGAVLYEM 232

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+K  N+ +++    KI DFGLA  +  D  R  TL  GT  Y+APE       S 
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC-GTPNYIAPEVLCKKGHSF 221
Query: 62  KANVFNYGVVL 72
           + ++++ G +L
Sbjct: 222 EVDIWSLGCIL 232

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLA-GTPEYLAPE 208

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H DIKP NIL++        KI DFGL+     D      L  GT  Y+APE  K   
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAYYIAPEVLKKK- 223
Query: 59  ISVKANVFNYGVVL 72
            + K +V++ GV++
Sbjct: 224 YNEKCDVWSCGVIM 237

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP----DQTRTFTLIRGTRGYMAPEWSK-- 55
           I+H DIKP N+L+    T KIS  G+A+ L P    D  RT    +G+  +  PE +   
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT---SQGSPAFQPPEIANGL 186
Query: 56  NTPISVKANVFNYGVVLLEIEIVLINWA----YKCF 87
           +T    K ++++ GV L  I   L  +     YK F
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF 222

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTR---GYMAPEWSKNTP 58
           +H  +   NIL++     K+SDFGL++ L  D +  T+T   G +    + APE  +   
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 59  ISVKANVFNYGVVLLEI 75
            +  ++V++YG+V+ E+
Sbjct: 191 FTSASDVWSYGIVMWEV 207

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLX-GTPEYLAPE 208

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H ++   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 152 FVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKD 207
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 208 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 248

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +H DIKP NIL+D     +++DFG    L  D T    +  GT  Y++PE
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H ++   N ++   +T KI DFG+ +    D   T    +G +G     +MAPE  K+
Sbjct: 151 FVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMAPESLKD 206
Query: 57  TPISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHD 98
              +  ++++++GVVL EI   L    Y+   + +  K V D
Sbjct: 207 GVFTTSSDMWSFGVVLWEI-TSLAEQPYQGLSNEQVLKFVMD 247

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-GTRGYMAPE 52
           I H DIK  N+L+    TA I+DFGLA      ++   T  + GTR YMAPE
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+D+    KI+DFGL+  +M D     T   G+  Y APE
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSC-GSPNYAAPE 177

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  +  +   L+ GT  +MAPE     P   
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGT 220
Query: 62  KANVFNYGVVLLEI 75
           + ++++ G++++E+
Sbjct: 221 EVDIWSLGIMVIEM 234

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL+    T K++DFGLA++       T  ++  T  Y APE    +  + 
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPEVLLQSTYAT 198
Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 199 PVDMWSVGCIFAEM 212

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEXIEGRXHDE 190
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 191 KVDLWSLGVLCYEF 204

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 35/51 (68%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    +++DFGLAK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIHCD+KP NIL+ +   +  K+ DFG +     +  R +T I+ +R Y APE       
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQ-SRFYRAPEVILGARY 276
Query: 60  SVKANVFNYGVVLLEI 75
            +  ++++ G +L E+
Sbjct: 277 GMPIDMWSLGCILAEL 292

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           IIHCD+KP NIL+ +   +  K+ DFG +     +  R +T I+ +R Y APE       
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCY---EHQRVYTXIQ-SRFYRAPEVILGARY 276
Query: 60  SVKANVFNYGVVLLEI 75
            +  ++++ G +L E+
Sbjct: 277 GMPIDMWSLGCILAEL 292

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+++D+    K++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG--YMAPEWSKNTPIS 60
           IH ++   NIL++     KI DFGL K+L  D+        G     + APE    +  S
Sbjct: 137 IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFS 196
Query: 61  VKANVFNYGVVLLEI 75
           V ++V+++GVVL E+
Sbjct: 197 VASDVWSFGVVLYEL 211

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-GTRGYMAPE 52
           I H D K  N+L+    TA ++DFGLA    P +    T  + GTR YMAPE
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+KP NI++    T KI DFGLA+    +   T  ++  TR Y APE       + 
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEVILGMGYAA 204
Query: 62  KANVFNYGVVLLEI 75
             ++++ G ++ E+
Sbjct: 205 NVDIWSVGCIMGEL 218

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 190 AVDWWGLGVVMYEM 203

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 203

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 2   IIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTR----TFTLIRGTRGYMAPEWSKN 56
           I+H D+K  N+L+    + A + DFG A  L PD       T   I GT  +MAPE    
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   K ++++   ++L +
Sbjct: 247 KPCDAKVDIWSSCCMMLHM 265

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 209

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 201

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 201

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 2   IIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTR----TFTLIRGTRGYMAPEWSKN 56
           I+H D+K  N+L+    + A + DFG A  L PD       T   I GT  +MAPE    
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   K ++++   ++L +
Sbjct: 231 KPCDAKVDIWSSCCMMLHM 249

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 229

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 208

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK +   + RT+ L  GT  Y+APE
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWXLC-GTPEYLAPE 229

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 2   IIHCDIKPHNILMDEFWTAK----ISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++ +    K    I DFGLA  +  D    F  I GT  ++APE     
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 58  PISVKANVFNYGVV 71
           P+ ++A++++ GV+
Sbjct: 193 PLGLEADMWSIGVI 206

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 2   IIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTR----TFTLIRGTRGYMAPEWSKN 56
           I+H D+K  N+L+    + A + DFG A  L PD       T   I GT  +MAPE    
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 57  TPISVKANVFNYGVVLLEI 75
            P   K ++++   ++L +
Sbjct: 245 KPCDAKVDIWSSCCMMLHM 263

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 190
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 191 KVDLWSLGVLCYEF 204

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 188
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 189 KVDLWSLGVLCYEF 202

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG +    P   R  T + GT  Y+ PE  +      
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRR--TTLSGTLDYLPPEMIEGRMHDE 186
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 187 KVDLWSLGVLCYEF 200

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 185
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 186 KVDLWSLGVLCYEF 199

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR----GYMAPEWSKNTP 58
           IH D+   NIL+      KI DFGLA+ +  D      +++G       +MAPE   N  
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSN---YVVKGNARLPVKWMAPESIFNCV 246
Query: 59  ISVKANVFNYGVVLLEIEIVLINWAYKCF-IDREFNKLVHD 98
            + +++V++YG+ L E+   L +  Y    +D +F K++ +
Sbjct: 247 YTFESDVWSYGIFLWEL-FSLGSSPYPGMPVDSKFYKMIKE 286

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 188
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 189 KVDLWSLGVLCYEF 202

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+K  NIL+D+    KI+DFG+ K  M    +T     GT  Y+APE       + 
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NXFCGTPDYIAPEILLGQKYNH 197
Query: 62  KANVFNYGVVLLEIEI 77
             + +++GV+L E+ I
Sbjct: 198 SVDWWSFGVLLYEMLI 213

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-- 59
           ++H D+   NIL+ E    KISDFGL++    D     + ++ ++G +  +W     +  
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 60  ---SVKANVFNYGVVLLEIEIVLINWAYKCFIDREFN--KLVHDEEVNKKTLENMIKVRL 114
              + +++V+++GV+L EI  +  N       +R FN  K  H  E      E M ++ L
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML 286
Query: 115 WC 116
            C
Sbjct: 287 QC 288

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 202
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 203 KVDLWSLGVLCYEF 216

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 184
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 185 KVDLWSLGVLCYEF 198

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-- 59
           ++H D+   NIL+ E    KISDFGL++    D     + ++ ++G +  +W     +  
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSYVKRSQGRIPVKWMAIESLFD 226
Query: 60  ---SVKANVFNYGVVLLEIEIVLINWAYKCFIDREFN--KLVHDEEVNKKTLENMIKVRL 114
              + +++V+++GV+L EI  +  N       +R FN  K  H  E      E M ++ L
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML 286
Query: 115 WC 116
            C
Sbjct: 287 QC 288

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-- 59
           ++H D+   NIL+ E    KISDFGL++    D     + ++ ++G +  +W     +  
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 60  ---SVKANVFNYGVVLLEIEIVLINWAYKCFIDREFN--KLVHDEEVNKKTLENMIKVRL 114
              + +++V+++GV+L EI  +  N       +R FN  K  H  E      E M ++ L
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLML 286
Query: 115 WC 116
            C
Sbjct: 287 QC 288

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 190
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 191 KVDLWSLGVLCYEF 204

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 182
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 183 KVDLWSLGVLCYEF 196

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR 187
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 188 AVDWWGLGVVMYEM 201

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 211
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 212 KVDLWSLGVLCYEF 225

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+K  NIL+D+    KI+DFG+ K  M    +T     GT  Y+APE       + 
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPDYIAPEILLGQKYNH 198
Query: 62  KANVFNYGVVLLEIEI 77
             + +++GV+L E+ I
Sbjct: 199 SVDWWSFGVLLYEMLI 214

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG + +  P   RT TL  GT  Y+ PE  +      
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRT-TLC-GTLDYLPPEMIEGRMHDE 189
Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 190 KVDLWSLGVLCYEF 203

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 2   IIHCDIKPHNILMDE-----FWTAKISDFGLAKLLMPDQTRTFTL---IRGTRGYMAPEW 53
           I+H D+KPHNIL+          A ISDFGL K L   +  +F+    + GT G++APE 
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR-HSFSRRSGVPGTEGWIAPEM 197
Query: 54  ----SKNTPISVKANVFNYGVVL 72
                K  P +   ++F+ G V 
Sbjct: 198 LSEDCKENP-TYTVDIFSAGCVF 219

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP N+L+   +E    KI+DFG +K+L   +T     + GT  Y+APE      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPE----VL 188
Query: 59  ISVKANVFNYGV 70
           +SV    +N  V
Sbjct: 189 VSVGTAGYNRAV 200

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP N+L+   +E    KI+DFG +K+L   +T     + GT  Y+APE      
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPE----VL 188
Query: 59  ISVKANVFNYGV 70
           +SV    +N  V
Sbjct: 189 VSVGTAGYNRAV 200

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D   T     GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+L+   +E    KI+DFG +K+L   +T     + GT  Y+APE
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPTYLAPE 192

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	137
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-41
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-32
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-31
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-23
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-21
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-19
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-18
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-18
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	8e-18
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-17
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	5e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-15
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-15
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-15
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-14
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-14
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-14
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-14
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-13
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-13
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-13
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-13
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-12
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-12
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-12
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-12
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-12
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-11
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-11
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-11
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-11
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-11
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-11
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-11
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-11
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-11
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-11
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	7e-11
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-11
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	9e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	9e-11
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-11
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-10
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-10
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-10
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-10
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-10
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-10
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	6e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-10
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	9e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-09
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-09
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-09
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-09
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	8e-09
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-08
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-08
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-08
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	3e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-08
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-08
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-08
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-08
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	7e-08
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	9e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	9e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-07
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-07
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-07
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-07
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-07
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-07
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-07
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-07
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-07
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-07
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-07
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-07
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-07
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	6e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-07
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-07
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-06
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-06
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-06
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-06
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-06
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	5e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  139 bits (353), Expect = 1e-41
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 31/154 (20%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+K  NIL+DE + A + DFGLAKL+    T   T +RGT G++APE+      S 
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE 214

Query: 62  KANVFNYGVVLLEI----------------EIVLINWAYKCFIDREFNKLVH---DEEVN 102
           K +VF YGV+LLE+                +++L++W      +++   LV         
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274

Query: 103 KKTLENMIKVRLWC------------SVVMMLEG 124
            + +E +I+V L C             VV MLEG
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  114 bits (288), Expect = 3e-32
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 31/155 (20%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
            IH DIK  NIL+DE +TAKISDFGLA+      QT   + I GT  YMAPE  +   I+
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-IT 212

Query: 61  VKANVFNYGVVLLEI------------EIVLINWAYKCFID-REFNKLVHD---EEVNKK 104
            K++++++GVVLLEI              +L++   +   + +     + D    + +  
Sbjct: 213 PKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI-DKKMNDADST 271

Query: 105 TLENMIKVRLWC------------SVVMMLEGITD 127
           ++E M  V   C             V  +L+ +T 
Sbjct: 272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  113 bits (285), Expect = 1e-31
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 32/158 (20%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL-LMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NIL+DE +  KI+DFG++K     DQT   T+++GT GY+ PE+     ++
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLT 219

Query: 61  VKANVFNYGVVLLEI--------------EIVLINWAYKCFIDREFNKLVHD----EEVN 102
            K++V+++GVVL E+               + L  WA +   + +  ++V D    +++ 
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV-DPNLADKIR 278

Query: 103 KKTLENMIKVRLWC------------SVVMMLEGITDI 128
            ++L       + C             V+  LE    +
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 90.9 bits (226), Expect = 4e-23
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-GTRGYMAPE-----WSK 55
           I H DIK  N+L+    TA I+DFGLA      ++   T  + GTR YMAPE      + 
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211

Query: 56  NTPISVKANVFNYGVVLLEI 75
                ++ +++  G+VL E+
Sbjct: 212 QRDAFLRIDMYAMGLVLWEL 231

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 88.9 bits (221), Expect = 2e-22
 Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H ++K  N+L+D+ +T K+ DFGL++ L      +     GT  +MAPE  ++ P + 
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218

Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV+L E+
Sbjct: 219 KSDVYSFGVILWEL 232

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 84.7 bits (210), Expect = 6e-21
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 2   IIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           +IH D+KP N+L+    T  KI DFG A     D     T  +G+  +MAPE  + +  S
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGSNYS 181

Query: 61  VKANVFNYGVVLLEI 75
            K +VF++G++L E+
Sbjct: 182 EKCDVFSWGIILWEV 196

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 81.0 bits (200), Expect = 2e-19
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 14/88 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-------QTRTFTLIRGTRGYMAPE-- 52
           I H D+   N+L+    T  ISDFGL+  L  +       +        GT  YMAPE  
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200

Query: 53  -----WSKNTPISVKANVFNYGVVLLEI 75
                         + +++  G++  EI
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEI 228

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 79.6 bits (197), Expect = 3e-19
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 2   IIHCDIKPHNILMDEF--------WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW 53
           IIH D+K  NIL+ +            KI+DFGLA+        +     G   +MAPE 
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA---GAYAWMAPEV 185

Query: 54  SKNTPISVKANVFNYGVVLLEI 75
            + +  S  ++V++YGV+L E+
Sbjct: 186 IRASMFSKGSDVWSYGVLLWEL 207

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 79.6 bits (197), Expect = 4e-19
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPE---WSKNT 57
           IIH D+K +NI + E  T KI DFGLA        +  F  + G+  +MAPE      + 
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200

Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 201 PYSFQSDVYAFGIVLYEL 218

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 80.2 bits (198), Expect = 4e-19
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF---TLIRGTRGYMAPE------ 52
           I H D+K  NIL+ +  T  I+D GLA   + D            GT+ YM PE      
Sbjct: 163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222

Query: 53  WSKNTPISVKANVFNYGVVLLEI 75
              +    + A+++++G++L E+
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEV 245

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.9 bits (195), Expect = 8e-19
 Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 11/81 (13%)

Query: 2   IIHCDIKPHNILMDEFW-----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE--WS 54
           I+H D++  NI +          AK++DFGL++        + + + G   +MAPE   +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETIGA 200

Query: 55  KNTPISVKANVFNYGVVLLEI 75
           +    + KA+ +++ ++L  I
Sbjct: 201 EEESYTEKADTYSFAMILYTI 221

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 78.2 bits (193), Expect = 2e-18
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP 58
           I H D+K  NIL+ +     I+D GLA +      +         GT+ YMAPE    T 
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193

Query: 59  ISV------KANVFNYGVVLLEI 75
                    + +++ +G+VL E+
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEV 216

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 77.8 bits (192), Expect = 3e-18
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-------------RTFTLIRGTRGY 48
           IIH D+  HN L+ E     ++DFGLA+L++ ++T             +    + G   +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188

Query: 49  MAPEWSKNTPISVKANVFNYGVVLLEI 75
           MAPE         K +VF++G+VL EI
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEI 215

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 77.4 bits (191), Expect = 4e-18
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 14/87 (16%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKL----LMPDQTRTFTLIRGTRGYMAPE----- 52
           I+H D+K  N+  D      I+DFGL  +        +     +  G   ++APE     
Sbjct: 151 ILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209

Query: 53  ----WSKNTPISVKANVFNYGVVLLEI 75
                    P S  ++VF  G +  E+
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYEL 236

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 76.7 bits (189), Expect = 8e-18
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLI---RGTRGYMAPE------ 52
           I H D+K  NIL+ +  T  I+D GLA                  GT+ YMAPE      
Sbjct: 168 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 227

Query: 53  WSKNTPISVKANVFNYGVVLLEI 75
             K+     +A+++  G+V  EI
Sbjct: 228 NMKHFESFKRADIYAMGLVFWEI 250

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 75.3 bits (186), Expect = 1e-17
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 9/77 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE---WSKNTP 58
           I    +   ++++DE  TA+IS   +        +           ++APE         
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKF------SFQSPGRMYAPAWVAPEALQKKPEDT 187

Query: 59  ISVKANVFNYGVVLLEI 75
               A+++++ V+L E+
Sbjct: 188 NRRSADMWSFAVLLWEL 204

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-LIRGTRGYMAPEWSKNTPIS 60
           I+H DIKP NIL+D   T KI DFG+AK L  + + T T  + GT  Y +PE +K     
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATD 190

Query: 61  VKANVFNYGVVLLE 74
              ++++ G+VL E
Sbjct: 191 ECTDIYSIGIVLYE 204

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 71.5 bits (176), Expect = 5e-16
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-LIRGTRGYMAPEWSKNTPIS 60
             H D+KP NIL+     A + DFG+A     D+  T      GT  YMAPE    +  +
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYMAPERFSESHAT 213

Query: 61  VKANVFNYGVVLLE 74
            +A+++    VL E
Sbjct: 214 YRADIYALTCVLYE 227

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 72.2 bits (177), Expect = 6e-16
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ D+KP NI++ E    K+ D G    +         L  GT G+ APE  +  P +V
Sbjct: 203 LVYNDLKPENIMLTEE-QLKLIDLGAVSRI----NSFGYLY-GTPGFQAPEIVRTGP-TV 255

Query: 62  KANVFNYGVVLLE 74
             +++  G  L  
Sbjct: 256 ATDIYTVGRTLAA 268

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 70.7 bits (174), Expect = 1e-15
 Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++      K+ DFG+A+ +       T+T  +I GT  Y++PE ++   
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDS 195

Query: 59  ISVKANVFNYGVVLLE 74
           +  +++V++ G VL E
Sbjct: 196 VDARSDVYSLGCVLYE 211

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 70.6 bits (173), Expect = 2e-15
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 10/84 (11%)

Query: 2   IIHCDIKPHNILMDE-----FWTAKISDFGLAKLLMPDQTRTFTL--IRGTRGYMAPE-- 52
           I+H D+KPHNIL+          A ISDFGL K L   +        + GT G++APE  
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198

Query: 53  -WSKNTPISVKANVFNYGVVLLEI 75
                   +   ++F+ G V   +
Sbjct: 199 SEDCKENPTYTVDIFSAGCVFYYV 222

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +I+ D+KP NI + +    KI DFGL   L  D  RT     GT  YM+PE   +     
Sbjct: 143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT-RSK-GTLRYMSPEQISSQDYGK 200

Query: 62  KANVFNYGVVLLEI 75
           + +++  G++L E+
Sbjct: 201 EVDLYALGLILAEL 214

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 69.9 bits (171), Expect = 4e-15
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K     
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKGVAYD 369

Query: 61  VKANVFNYGVVLLE 74
             A+ F+ G +L +
Sbjct: 370 SSADWFSLGCMLFK 383

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 69.1 bits (169), Expect = 4e-15
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-----------GTRGYMA 50
           ++H D+KP NI        K+ DFGL   +  D+     L             GT+ YM+
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244

Query: 51  PEWSKNTPISVKANVFNYGVVLLE 74
           PE       S K ++F+ G++L E
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFE 268

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 69.1 bits (169), Expect = 5e-15
 Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 209

Query: 62  KANVFNYGVVLLEI 75
           ++++++ G+ L+E+
Sbjct: 210 QSDIWSMGLSLVEM 223

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 69.0 bits (169), Expect = 7e-15
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP N+L+D+    +ISD GLA  L   QT+T     GT G+MAPE         
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEEYDF 368

Query: 62  KANVFNYGVVLLE 74
             + F  GV L E
Sbjct: 369 SVDYFALGVTLYE 381

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 68.1 bits (167), Expect = 9e-15
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H DIKP N+ +      K+ D GL +      T   +L+ GT  YM+PE       + 
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 215

Query: 62  KANVFNYGVVLLE 74
           K+++++ G +L E
Sbjct: 216 KSDIWSLGCLLYE 228

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+ +D     K+ DFGLA++L  D +   T + GT  YM+PE       + 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNE 195

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 196 KSDIWSLGCLLYEL 209

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 67.8 bits (166), Expect = 2e-14
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H DIK  NI + +  T ++ DFG+A++L          I GT  Y++PE  +N P + 
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENKPYNN 204

Query: 62  KANVFNYGVVLLEI 75
           K++++  G VL E+
Sbjct: 205 KSDIWALGCVLYEL 218

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 67.1 bits (164), Expect = 3e-14
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 23/94 (24%)

Query: 2   IIHCDIKPHNILMD-------------EFWTAKISDFGLAKLLMPDQTRTFTLIR---GT 45
           IIH D+KP NIL+              E     ISDFGL K L   Q+   T +    GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195

Query: 46  RGYMAPE-------WSKNTPISVKANVFNYGVVL 72
            G+ APE             ++   ++F+ G V 
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 66.6 bits (163), Expect = 3e-14
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL-MPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           ++H D+KP NI +      K+ DFGL   L             G   YMAPE  +     
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPELLQG-SYG 233

Query: 61  VKANVFNYGVVLLEI 75
             A+VF+ G+ +LE+
Sbjct: 234 TAADVFSLGLTILEV 248

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 66.0 bits (161), Expect = 9e-14
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSKNTPIS 60
           I++ D+KP NIL+D+    +ISD GLA  +   Q  +      GT GYMAPE  KN   +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV---GTVGYMAPEVVKNERYT 363

Query: 61  VKANVFNYGVVLLE 74
              + +  G +L E
Sbjct: 364 FSPDWWALGCLLYE 377

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 65.1 bits (159), Expect = 1e-13
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-----------GTRGYMA 50
           ++H D+KP NI        K+ DFGL   +  D+     L             GT+ YM+
Sbjct: 139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198

Query: 51  PEWSKNTPISVKANVFNYGVVLLEI 75
           PE       S K ++F+ G++L E+
Sbjct: 199 PEQIHGNSYSHKVDIFSLGLILFEL 223

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 65.4 bits (159), Expect = 1e-13
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 16/85 (18%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-------- 53
           ++H  ++P +I++D+     ++ F        D  R  +    +RG+  PE         
Sbjct: 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLV---RDGARVVS--SVSRGFEPPELEARRATIS 281

Query: 54  ---SKNTPISVKANVFNYGVVLLEI 75
               + T ++   + +  G+V+  I
Sbjct: 282 YHRDRRTLMTFSFDAWALGLVIYWI 306

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 64.7 bits (158), Expect = 2e-13
 Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NIL+DE     I+DF +A  ++P +T+  T+  GT+ YMAPE
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAA-MLPRETQITTMA-GTKPYMAPE 184

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 64.2 bits (157), Expect = 3e-13
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KPH +L+   +     K+  FG+A  L          + GT  +MAPE  K  P
Sbjct: 151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKREP 209

Query: 59  ISVKANVFNYGVVL 72
                +V+  GV+L
Sbjct: 210 YGKPVDVWGCGVIL 223

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 63.0 bits (154), Expect = 5e-13
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    K++DFG +  L P +      + GT  Y+APE
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTPSYLAPE 193

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 63.2 bits (154), Expect = 5e-13
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPE 52
           I+H D+KP N L+ +    K+ DFG+A  + PD T        GT  YM PE
Sbjct: 129 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 63.5 bits (154), Expect = 6e-13
 Identities = 8/76 (10%), Positives = 21/76 (27%), Gaps = 6/76 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW--SKNTPI 59
           ++H    P N+ +       + D      +                Y   E+  +     
Sbjct: 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKV----GTRGPASSVPVTYAPREFLNASTATF 270

Query: 60  SVKANVFNYGVVLLEI 75
           +   N +  G+ +  +
Sbjct: 271 THALNAWQLGLSIYRV 286

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 63.3 bits (154), Expect = 6e-13
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPE 52
           I+H D+KP N L+ +    K+ DFG+A  + PD T        G   YM PE
Sbjct: 176 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 63.1 bits (154), Expect = 6e-13
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPE 52
           I+H D+KP N L+ +    K+ DFG+A  + PD T        GT  YM PE
Sbjct: 148 IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H DIK  N+L++ +    KISDFG +K L      T T   GT  YMAPE
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF-TGTLQYMAPE 193

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP NIL+         KI DFG+++ +          I GT  Y+APE     P
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDP 209

Query: 59  ISVKANVFNYGVVL 72
           I+   +++N G++ 
Sbjct: 210 ITTATDMWNIGIIA 223

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 61.7 bits (150), Expect = 2e-12
 Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+D+    ++SDFG +  L P +      + GT GY+APE
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLRELCGTPGYLAPE 269

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 61.3 bits (149), Expect = 3e-12
 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTL----IRGTRGYMAPEWSKN 56
           I+H D+K  N+L+      A + DFG A  L PD      L    I GT  +MAPE    
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230

Query: 57  TPISVKANVFNYGVVLLE 74
            P   K ++++   ++L 
Sbjct: 231 KPCDAKVDIWSSCCMMLH 248

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 61.1 bits (149), Expect = 3e-12
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++          K+ DFGLA  +       F  I GT  ++APE     
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYE 193

Query: 58  PISVKANVFNYGVVL 72
           P+ ++A++++ GV+ 
Sbjct: 194 PLGLEADMWSIGVIT 208

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP--DQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NIL++E    +I+DFG AK+L P   Q R  + + GT  Y++PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPE 202

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 60.5 bits (146), Expect = 5e-12
 Identities = 9/79 (11%), Positives = 25/79 (31%), Gaps = 5/79 (6%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----N 56
           ++H  ++P +I++D+     ++ F                        A           
Sbjct: 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHP 291

Query: 57  TPISVKANVFNYGVVLLEI 75
           T ++   + +  G+ +  I
Sbjct: 292 TLMTFAFDTWTLGLAIYWI 310

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 60.4 bits (147), Expect = 6e-12
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE----WSKNT 57
           IIH DIKP NIL+D     K+ DFG++  L+    +T     G R YMAPE     +   
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSASRQ 204

Query: 58  PISVKANVFNYGVVLLEI 75
              V+++V++ G+ L E+
Sbjct: 205 GYDVRSDVWSLGITLYEL 222

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 60.4 bits (147), Expect = 7e-12
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           ++H ++KP N+L+    +    K++DFGLA  +  +Q   F    GT GY++PE  +  P
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-GTPGYLSPEVLRKDP 189

Query: 59  ISVKANVFNYGVVL 72
                +++  GV+L
Sbjct: 190 YGKPVDLWACGVIL 203

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 59.7 bits (145), Expect = 9e-12
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 7/79 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-----WSKN 56
           +IH D+KP NIL+DE    K+ DFG++  L+ D+ +  +   G   YMAPE         
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203

Query: 57  TPISVKANVFNYGVVLLEI 75
               ++A+V++ G+ L+E+
Sbjct: 204 PDYDIRADVWSLGISLVEL 222

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.6 bits (145), Expect = 1e-11
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +   +   +    GT GY++PE  K  P
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDP 206

Query: 59  ISVKANVFNYGVVL 72
            S   +++  GV+L
Sbjct: 207 YSKPVDIWACGVIL 220

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++          K+ DFGLA  +       F  I GT  ++APE     
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYE 193

Query: 58  PISVKANVFNYGVVL 72
           P+ ++A++++ GV+ 
Sbjct: 194 PLGLEADMWSIGVIT 208

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 59.7 bits (145), Expect = 1e-11
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 21/108 (19%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR-------------GTRGY 48
           IIH D+KP NI +DE    KI DFGLAK +           +             GT  Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196

Query: 49  MAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKL 95
           +A E    T   + K ++++ G++  E+        Y      E   +
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEM-------IYPFSTGMERVNI 237

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 59.8 bits (145), Expect = 1e-11
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
            +H DIKP NILMD     +++DFG    LM D T ++   + GT  Y++PE
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPE 246

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH D+K  N+ ++E    KI DFGLA  +  D  R   L  GT  Y+APE
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPE 185

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.9 bits (145), Expect = 1e-11
 Identities = 21/73 (28%), Positives = 44/73 (60%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D++  NIL+ E    K++DFGLA+L+  ++       +    + APE +     ++K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444

Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L E+
Sbjct: 445 SDVWSFGILLTEL 457

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++          K+ DFG+A  +       F  I GT  ++APE     
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYE 186

Query: 58  PISVKANVFNYGVVL 72
           P+ ++A++++ GV+ 
Sbjct: 187 PLGLEADMWSIGVIT 201

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIKP N+LM      KI+DFG +        R  T+  GT  Y+ PE
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRTMC-GTLDYLPPE 182

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 59.1 bits (144), Expect = 1e-11
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H ++KP N+L+    +    K++DFGLA  +   +   +    GT GY++PE  K  P
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--AWHGFAGTPGYLSPEVLKKDP 183

Query: 59  ISVKANVFNYGVVL 72
            S   +++  GV+L
Sbjct: 184 YSKPVDIWACGVIL 197

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 2   IIHCDIKPHNILM--DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I+H DIKP NI+    +  + KI DFGLA  L PD+     +   T  + APE     P+
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPV 227

Query: 60  SVKANVFNYGVVL 72
               +++  GV+ 
Sbjct: 228 GFYTDMWAIGVLG 240

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 23/74 (31%), Positives = 39/74 (52%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH ++   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398

Query: 62  KANVFNYGVVLLEI 75
           K++V+ +GV+L EI
Sbjct: 399 KSDVWAFGVLLWEI 412

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 58.9 bits (143), Expect = 2e-11
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH D+K  N+ ++E    KI DFGLA  +  D  R   L  GT  Y+APE
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC-GTPNYIAPE 211

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 2   IIHCDIKPHNILM--DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I H DI+P NI+       T KI +FG A+ L P     F L+     Y APE  ++  +
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--NFRLLFTAPEYYAPEVHQHDVV 180

Query: 60  SVKANVFNYGVVL 72
           S   ++++ G ++
Sbjct: 181 STATDMWSLGTLV 193

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 58.8 bits (143), Expect = 2e-11
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 6/75 (8%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++          KI DFGLA  +       F  I GT  ++APE     
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYE 192

Query: 58  PISVKANVFNYGVVL 72
           P+ ++A++++ GV+ 
Sbjct: 193 PLGLEADMWSIGVIT 207

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 58.4 bits (142), Expect = 2e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG +       +R   L  GT  Y+ PE  +      
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSV--HAPSSRRTDLC-GTLDYLPPEMIEGRMHDE 186

Query: 62  KANVFNYGVVLLE 74
           K ++++ GV+  E
Sbjct: 187 KVDLWSLGVLCYE 199

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.5 bits (142), Expect = 3e-11
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  +IL+      K+SDFG    +  D  +  +L+ GT  +MAPE    +  + 
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV-GTPYWMAPEVISRSLYAT 220

Query: 62  KANVFNYGVVLLE 74
           + ++++ G++++E
Sbjct: 221 EVDIWSLGIMVIE 233

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 58.6 bits (142), Expect = 3e-11
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H D+KP NILMD+    K+SDFG ++ ++  + +     RGT  +M PE
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPE 220

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I++ D+KP NIL+D      ++DFGL K  +   + T T   GT  Y+APE
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC-GTPEYLAPE 209

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 8/79 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPE----WSKN 56
           +IH D+KP N+L++     K+ DFG++  L+ D  +       G + YMAPE        
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQ 187

Query: 57  TPISVKANVFNYGVVLLEI 75
              SVK+++++ G+ ++E+
Sbjct: 188 KGYSVKSDIWSLGITMIEL 206

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 58.2 bits (141), Expect = 3e-11
 Identities = 21/74 (28%), Positives = 44/74 (59%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D++  NIL+ E    K++DFGLA+L+  ++       +    + APE +     ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L E+
Sbjct: 361 KSDVWSFGILLTEL 374

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I+H D+KP NIL         KI DFGLA+   P +     +  GT  ++APE      +
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDFV 265

Query: 60  SVKANVFNYGVVL 72
           S   ++++ GV+ 
Sbjct: 266 SFPTDMWSVGVIA 278

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)

Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L    +E     I+DFGL+K+       T     GT GY+APE     P
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC---GTPGYVAPEVLAQKP 183

Query: 59  ISVKANVFNYGVVL 72
            S   + ++ GV+ 
Sbjct: 184 YSKAVDCWSIGVIT 197

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 58.2 bits (141), Expect = 4e-11
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK-LLMPDQTRTFTLIRGTRGYMAPE 52
            IH D+KP N+L+D+    K++DFG    +      R  T + GT  Y++PE
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPE 239

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.1 bits (141), Expect = 4e-11
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L          KI+DFGL+K++          + GT GY APE  +   
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCA 226

Query: 59  ISVKANVFNYGVVL 72
              + ++++ G++ 
Sbjct: 227 YGPEVDMWSVGIIT 240

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 58.2 bits (140), Expect = 4e-11
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           IIH D+KP NI++    +    KI D G AK L   +  T   + GT  Y+APE  +   
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT-EFV-GTLQYLAPELLEQKK 199

Query: 59  ISVKANVFNYGVVL 72
            +V  + +++G + 
Sbjct: 200 YTVTVDYWSFGTLA 213

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +++ DIK  N+++D+    KI+DFGL K  + D     T   GT  Y+APE
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPE 175

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 57.5 bits (140), Expect = 5e-11
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+   N+L+      KI+DFGLA  L     + +TL  GT  Y++PE
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC-GTPNYISPE 182

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 57.7 bits (140), Expect = 5e-11
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L    ++    KI DFG A+L  PD     T    T  Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPE 179

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+K  N+L+D     K++DFG+ K  + +   T T   GT  Y+APE
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC-GTPDYIAPE 194

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NI+++     K++DFGL K  + D T T T   GT  YMAPE
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC-GTIEYMAPE 191

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 57.6 bits (140), Expect = 6e-11
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NIL+DE    K++DFGL+K  +  + + ++   GT  YMAPE
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPE 196

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 57.5 bits (139), Expect = 6e-11
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 7/78 (8%)

Query: 2   IIHCDIKPHNILM--DEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPE--WS 54
           I H DIKP N L   ++ +  K+ DFGL+K         +  +    GT  ++APE   +
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248

Query: 55  KNTPISVKANVFNYGVVL 72
            N     K + ++ GV+L
Sbjct: 249 TNESYGPKCDAWSAGVLL 266

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 57.5 bits (139), Expect = 7e-11
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
            +H D+KP NI+     +   K+ DFGL   L P Q+    +  GT  + APE ++  P+
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPV 333

Query: 60  SVKANVFNYGVVL 72
               ++++ GV+ 
Sbjct: 334 GYYTDMWSVGVLS 346

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 56.9 bits (138), Expect = 8e-11
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 195

Query: 62  KANVFNYGVVLLE 74
           K ++++ G++ +E
Sbjct: 196 KVDIWSLGIMAIE 208

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 57.0 bits (138), Expect = 9e-11
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-QTRTFTLIRGTRGYMAPE 52
            +H DIKP NIL+D     +++DFG    L  D   R+   + GT  Y++PE
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPE 233

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 56.9 bits (138), Expect = 9e-11
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+K  N+L+D     K++D+G+ K  +     T T   GT  Y+APE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPE 180

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 57.0 bits (138), Expect = 9e-11
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +++ D+K  N+++D+    KI+DFGL K  + D     T   GT  Y+APE
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPE 319

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+L+   +E    KI+DFG +K ++ + +   TL  GT  Y+APE
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPE 311

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 56.7 bits (137), Expect = 1e-10
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H +IKP NI+     D     K++DFG A+ L  D+   F  + GT  Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPD 185

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP NIL         + +I DFG AK L  +     T    T  ++APE
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC-YTANFVAPE 190

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 56.4 bits (136), Expect = 1e-10
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 2   IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H +IKP NI+     D     K++DFG A+ L  D+    +L  GT  Y+ P+
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV-SLY-GTEEYLHPD 185

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 56.5 bits (136), Expect = 1e-10
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 12/86 (13%)

Query: 2   IIHCDIKPHNILMDEFWTA-----------KISDFGLAK-LLMPDQTRTFTLIRGTRGYM 49
           IIH DIKP N ++   +              + D G +  + +  +   FT    T G+ 
Sbjct: 193 IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQ 252

Query: 50  APEWSKNTPISVKANVFNYGVVLLEI 75
             E   N P + + + F     +  +
Sbjct: 253 CVEMLSNKPWNYQIDYFGVAATVYCM 278

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPE 52
           II+ DIK  NIL+D      ++DFGL+K  + D+  R +    GT  YMAP+
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC-GTIEYMAPD 230

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 56.6 bits (137), Expect = 2e-10
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+   ++    KI DFGL+     +         GT  Y+APE
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPE 193

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+L+   +E    KI+DFG +K ++ + +   TL  GT  Y+APE
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTLC-GTPTYLAPE 186

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H DIKP NIL+   +     KI DFGL+     D         GT  Y+APE
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPE 218

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I++ D+K  NIL+D+    KI+DFG+ K  M    +T T   GT  Y+APE
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFC-GTPDYIAPE 188

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 56.2 bits (136), Expect = 2e-10
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+K  N+L+D     K++D+G+ K  +     T T   GT  Y+APE
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC-GTPNYIAPE 223

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+K  N+++D     KI+DFG+ K  + D   T T   GT  Y+APE
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC-GTPDYIAPE 512

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            IH D++  NIL+      KI+DFGLA+++  ++   +T   G +    + APE      
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGS 361

Query: 59  ISVKANVFNYGVVLLEI 75
            ++K++V+++G++L+EI
Sbjct: 362 FTIKSDVWSFGILLMEI 378

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+    +    +I DFGL+      +        GT  Y+APE
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMKDKIGTAYYIAPE 198

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 55.8 bits (135), Expect = 2e-10
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 25/94 (26%)

Query: 2   IIHCDIKPHNILMDE-------------------FWTAKISDFGLAKLLMPDQTRTFTLI 42
           ++H DIKP NI +                         KI D G    +   Q       
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE---- 191

Query: 43  RGTRGYMAPE-WSKNTPISVKANVFNYGVVLLEI 75
            G   ++A E   +N     KA++F   + ++  
Sbjct: 192 -GDSRFLANEVLQENYTHLPKADIFALALTVVCA 224

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+   ++    KI DFGL+ +    +        GT  Y+APE
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK--KMKERLGTAYYIAPE 208

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H D+KP N+L          K++DFG AK        + T    T  Y+APE
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPE 233

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+   ++    KI DFGL+     +         GT  Y+APE
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPE 193

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+K  N+++D     KI+DFG+ K  + D   T T   GT  Y+APE
Sbjct: 142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFC-GTPDYIAPE 191

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NI +     + KI D GLA L      +      GT  +MAPE  +     
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV---IGTPEFMAPEMYEE-KYD 207

Query: 61  VKANVFNYGVVLLE 74
              +V+ +G+ +LE
Sbjct: 208 ESVDVYAFGMCMLE 221

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           + H D+KP N L          K+ DFGLA    P +        GT  Y++P+
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVSPQ 178

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 55.0 bits (133), Expect = 5e-10
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +I+ D+KP N+L+D+    +++DFG AK     + RT+TL  GT   +APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKR---VKGRTWTL-CGTPEALAPE 208

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 54.5 bits (132), Expect = 6e-10
 Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP NIL          KI DFGLA+L   D+    T   GT  YMAPE
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALYMAPE 196

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 54.7 bits (132), Expect = 6e-10
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H D+KP N+L    ++    K++DFG AK    +  +T      T  Y+APE
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPC---YTPYYVAPE 199

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 54.6 bits (131), Expect = 7e-10
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   NIL+ E    KI DFGLA+ +  D       +R         +MAPE   +
Sbjct: 214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP----DYVRKGDARLPLKWMAPETIFD 269

Query: 57  TPISVKANVFNYGVVLLEI 75
              +++++V+++GV+L EI
Sbjct: 270 RVYTIQSDVWSFGVLLWEI 288

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           II+ D+KP NIL+D+    KI+DFG AK + PD T T     GT  Y+APE
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYTL---CGTPDYIAPE 173

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH DIK  NIL++    AK++DFG+A  L     +  T+I GT  +MAPE  +    + 
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-GTPFWMAPEVIQEIGYNC 204

Query: 62  KANVFNYGVVLLE 74
            A++++ G+  +E
Sbjct: 205 VADIWSLGITAIE 217

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 53.0 bits (128), Expect = 2e-09
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH DIKP N+L+ E    KI+DFG++             + GT  +MAPE
Sbjct: 158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV-GTPAFMAPE 207

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--------GTRGYMAPE- 52
             H D+KP NIL+ +     + D G           +   +          T  Y APE 
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214

Query: 53  WS--KNTPISVKANVFNYGVVL 72
           +S   +  I  + +V++ G VL
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVL 236

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 52.7 bits (127), Expect = 2e-09
 Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW 53
           ++H DIK  NIL+D      K+ DFG   LL       F    GTR Y  PEW
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPEW 219

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW 53
           ++H DIK  NIL+D     AK+ DFG   LL  +    F    GTR Y  PEW
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD---GTRVYSPPEW 209

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H DIKP N+L++ +  T K+ DFG AK L+P +     +   +R Y APE
Sbjct: 162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYIC--SRFYRAPE 211

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.1 bits (125), Expect = 4e-09
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLI-----------RGTRGYMA 50
           IIH D+K  N+L+    T K+ DFG A  +      +++               T  Y  
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRT 218

Query: 51  PE---WSKNTPISVKANVFNYGVVLLEI 75
           PE      N PI  K +++  G +L  +
Sbjct: 219 PEIIDLYSNFPIGEKQDIWALGCILYLL 246

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 51.9 bits (125), Expect = 5e-09
 Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH DIK  N+L+ E    K++DFG+A  L   Q +  T + GT  +MAPE  K +    
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 198

Query: 62  KANVFNYGVVLLEI 75
           KA++++ G+  +E+
Sbjct: 199 KADIWSLGITAIEL 212

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 51.9 bits (125), Expect = 6e-09
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           + H DIKPHN+L++E   T K+ DFG AK L P +     +   +R Y APE
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC--SRYYRAPE 201

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 51.5 bits (124), Expect = 7e-09
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           I+H D+K  N+L+D     KI+DFG +           F    G   Y APE
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPE 183

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 51.3 bits (123), Expect = 8e-09
 Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           IIH DIK  NI++ E +T K+ DFG A  L   +   TF    GT  Y APE
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPE 199

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D    AKI+DFGL+ ++   +  RT     G+  Y APE
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE 185

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPE 52
           I+H DIKP N+L+    T KIS  G+A+             R   G+  +  PE
Sbjct: 130 IVHKDIKPGNLLLTTGGTLKISALGVAEA--LHPFAADDTCRTSQGSPAFQPPE 181

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 51.2 bits (123), Expect = 1e-08
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H DIKP N+L+D +    K+ DFG AK L+  +     +   +R Y APE
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRAPE 226

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIR------GTRGYMAPE 52
           I H D+KP NIL    ++    KI DF L   +  +   +           G+  YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH DIK  N+L+ E    K+ DFG++  L     R  T I GT  +MAPE
Sbjct: 150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPE 199

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 50.7 bits (122), Expect = 1e-08
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPE 52
           ++H D+KP N+L++     KI DFGLA++  PD   T  L     TR Y APE
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I H DIKP N+L+D      K+ DFG AK+L+  +     +   +R Y APE
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC--SRYYRAPE 211

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+D+    KI+DFGL+ ++      +T     G+  Y APE
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 177

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPE 52
           I H DIKP N+L+DE    KISDFGLA +          L+    GT  Y+APE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATV--FRYNNRERLLNKMCGTLPYVAPE 177

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NI++    T KI DFGLA+          T    TR Y APE
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPE 196

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 50.1 bits (120), Expect = 2e-08
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 6/54 (11%)

Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           I H D+K  N L+D       KI DFG +K  +     ++     GT  Y+APE
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV---GTPAYIAPE 187

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 50.0 bits (120), Expect = 2e-08
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFGL+++L  D   T+T    T G      + APE    
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT----TSGGKIPIRWTAPEAISY 224

Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++G+V+ E+
Sbjct: 225 RKFTSASDVWSFGIVMWEV 243

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 7/78 (8%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGY----MAPEWSKNT 57
            IH D+   N L+ E    KISDFG+++         +    G R       APE     
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADG---VYAASGGLRQVPVKWTAPEALNYG 290

Query: 58  PISVKANVFNYGVVLLEI 75
             S +++V+++G++L E 
Sbjct: 291 RYSSESDVWSFGILLWET 308

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPE 52
           I H DIKP N+L+DE    KISDFGLA +          L+    GT  Y+APE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATV--FRYNNRERLLNKMCGTLPYVAPE 177

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPE 52
           ++H D+KP N+L+D    AKI+DFGL+ ++   +  RT     G+  Y APE
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE 180

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 49.6 bits (118), Expect = 4e-08
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H ++   N+L+     AKISDFGL+K L  D +  +T     +    + APE       
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRKF 516

Query: 60  SVKANVFNYGVVLLEI 75
           S +++V++YGV + E 
Sbjct: 517 SSRSDVWSYGVTMWEA 532

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 49.3 bits (118), Expect = 4e-08
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+ ++E    KI DFGLA+    + T        TR Y APE
Sbjct: 153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA----TRWYRAPE 199

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP N+ ++E    KI DFGLA+    + T        TR Y APE
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVV----TRWYRAPE 195

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 49.2 bits (118), Expect = 4e-08
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+ P NIL+ +     I DF LA+    D  +T  +    R Y APE
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT--HRWYRAPE 203

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D++  NIL+ +  + KI+DFGLA+L+  ++   +T   G +    + APE       
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTF 187

Query: 60  SVKANVFNYGVVLLEI 75
           ++K++V+++G++L EI
Sbjct: 188 TIKSDVWSFGILLTEI 203

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 49.1 bits (118), Expect = 5e-08
 Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH DIKP NIL+ +    K+ DFG A+ L       +     TR Y APE
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPE 194

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+ ++E    KI DFGLA+    + T        TR Y APE
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYRAPE 193

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 49.1 bits (117), Expect = 6e-08
 Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+KP NI++    T KI DFGLA+          T    TR Y APE
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPE 233

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 48.7 bits (117), Expect = 7e-08
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
            IH D+KP NIL+ +    K+ DFG A+LL    +  +     TR Y +PE
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPE 172

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGL K     Q      ++    + APE  +    S 
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFST 365

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 366 KSDVWSFGILLWEI 379

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 10/79 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   NIL++     K+SDFGL ++L  D    +T    TRG      + +PE    
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT----TRGGKIPIRWTSPEAIAY 224

Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V++YG+VL E+
Sbjct: 225 RKFTSASDVWSYGIVLWEV 243

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 48.3 bits (116), Expect = 7e-08
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N L+D     K+SDFG+ + ++ DQ   +    GT+    + APE       
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFKY 182

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+ +G+++ E+
Sbjct: 183 SSKSDVWAFGILMWEV 198

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 48.5 bits (116), Expect = 8e-08
 Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H ++   N+L+      +++DFG+A LL PD  +        +    +MA E       
Sbjct: 137 VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMALESIHFGKY 194

Query: 60  SVKANVFNYGVVLLEI 75
           + +++V++YGV + E+
Sbjct: 195 THQSDVWSYGVTVWEL 210

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 48.4 bits (116), Expect = 8e-08
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            IH D+   NIL++     KI DFGL K+L P     F +         + APE    + 
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESK 193

Query: 59  ISVKANVFNYGVVLLEI 75
            SV ++V+++GVVL E+
Sbjct: 194 FSVASDVWSFGVVLYEL 210

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.7 bits (116), Expect = 9e-08
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H DI   N+L+      K+ DFGL++ +           + ++G     +MAPE     
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINFR 567

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V+ +GV + EI
Sbjct: 568 RFTSASDVWMFGVCMWEI 585

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N L+++    K+SDFGL++ ++ D+   +T   G++    +  PE    +  
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 198

Query: 60  SVKANVFNYGVVLLEI 75
           S K++++ +GV++ EI
Sbjct: 199 SSKSDIWAFGVLMWEI 214

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 48.4 bits (116), Expect = 9e-08
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KPHN+++D E    ++ D+GLA+   P Q     +   +R +  PE
Sbjct: 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPE 200

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H D+   N+L+D     K+SDFGL+++L  D    +T    T G     + APE     
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT---TTGGKIPIRWTAPEAIAFR 229

Query: 58  PISVKANVFNYGVVLLEI 75
             S  ++V+++GVV+ E+
Sbjct: 230 TFSSASDVWSFGVVMWEV 247

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 48.1 bits (115), Expect = 1e-07
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIH D+K  N+LM      +++DFG++   +    +  + I GT  +MAPE
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPE 187

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL----IRGTRGYMAPEWSKNTP 58
           IH D+   N L+ E    K++DFGL++L+  D           I+    + APE      
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK----WTAPESLAYNK 188

Query: 59  ISVKANVFNYGVVLLEI 75
            S+K++V+ +GV+L EI
Sbjct: 189 FSIKSDVWAFGVLLWEI 205

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 47.8 bits (114), Expect = 1e-07
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            IH D+   NIL++     KI DFGL K+L P     + +         + APE    + 
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPESLTESK 224

Query: 59  ISVKANVFNYGVVLLEI 75
            SV ++V+++GVVL E+
Sbjct: 225 FSVASDVWSFGVVLYEL 241

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 47.6 bits (114), Expect = 1e-07
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   N+L+     AKI DFGLA+ +M D                  +MAPE   +
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI----VKGNARLPVKWMAPESIFD 240

Query: 57  TPISVKANVFNYGVVLLEI 75
              +V+++V++YG++L EI
Sbjct: 241 CVYTVQSDVWSYGILLWEI 259

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L+++    K+ DFGLA+        TF+    T  Y AP+
Sbjct: 129 ILHRDLKPQNLLINKRGQLKLGDFGLAR-AFGIPVNTFSSEVVTLWYRAPD 178

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG---YMAPEWSKNTP 58
            +H D+   NIL++     KI+DFGLAKLL  D+   + +    +    + APE   +  
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD-YYVVREPGQSPIFWYAPESLSDNI 206

Query: 59  ISVKANVFNYGVVLLEI 75
            S +++V+++GVVL E+
Sbjct: 207 FSRQSDVWSFGVVLYEL 223

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 9/60 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG---------TRGYMAPE 52
           +IH D+KP N+L++     K+ DFGLA+++                      TR Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP N+L++     K++DFGLA+       R++T    T  Y AP+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR-AFGIPVRSYTHEVVTLWYRAPD 189

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++     K+++FGLA+       R ++    T  Y  P+
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCYSAEVVTLWYRPPD 171

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N L+ E    K+SDFG+ + ++ DQ   +T   GT+    + +PE    +  
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 182

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+++GV++ E+
Sbjct: 183 SSKSDVWSFGVLMWEV 198

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   N ++DE +T K++DFGLA+ +     R +  ++  R       + A E  + 
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDI---LDREYYSVQQHRHARLPVKWTALESLQT 202

Query: 57  TPISVKANVFNYGVVLLEI 75
              + K++V+++GV+L E+
Sbjct: 203 YRFTTKSDVWSFGVLLWEL 221

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   NIL+      KI DFGLA+ +  D                  +MAPE   N
Sbjct: 166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV----VKGNARLPVKWMAPESIFN 221

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V++YG+ L E+
Sbjct: 222 CVYTFESDVWSYGIFLWEL 240

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N+L+      KI+DFGLAKLL  ++        G +    +MA E   +   
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRIY 196

Query: 60  SVKANVFNYGVVLLEI 75
           + +++V++YGV + E+
Sbjct: 197 THQSDVWSYGVTVWEL 212

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 4/55 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR----GTRGYMAPE 52
            IH D+K  NIL+ E  + +I+DFG++  L      T   +R    GT  +MAPE
Sbjct: 142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++E    K++DFGLA+      T+T+     T  Y  P+
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPD 170

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H DI   N+L+      K+ DFGL++ +           + ++G     +MAPE     
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY-----YKASKGKLPIKWMAPESINFR 192

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V+ +GV + EI
Sbjct: 193 RFTSASDVWMFGVCMWEI 210

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++     K++DFGLA+       RT+T    T  Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYTHEVVTLWYRAPE 173

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP N+L++     KI+DFGLA+       R +T    T  Y AP+
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR-AFGIPVRKYTHEIVTLWYRAPD 170

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTP 58
            +H D+   N+L++     KI DFGL K +       +T+         + APE    + 
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAI-ETDKEYYTVKDDRDSPVFWYAPECLMQSK 205

Query: 59  ISVKANVFNYGVVLLEI 75
             + ++V+++GV L E+
Sbjct: 206 FYIASDVWSFGVTLHEL 222

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP+N+L+DE    K++DFGLAK       R +T    TR Y APE
Sbjct: 133 ILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRAYTHQVVTRWYRAPE 182

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N+L+     AKISDFGL+K L  D+   +      +    + APE       
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN-YYKAQTHGKWPVKWYAPECINYYKF 197

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+++GV++ E 
Sbjct: 198 SSKSDVWSFGVLMWEA 213

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIR--GTRGYMAPE 52
           ++H D+KP N+ ++ E    KI DFGLA+++ P  +    L     T+ Y +P 
Sbjct: 141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           I+H D+KP NIL+    T K++DFGLA++       T  ++  T  Y APE
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPE 189

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N+L+     AKISDFGL+K L  D +  +T     +    + APE       
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDS-YYTARSAGKWPLKWYAPECINFRKF 190

Query: 60  SVKANVFNYGVVLLEI 75
           S +++V++YGV + E 
Sbjct: 191 SSRSDVWSYGVTMWEA 206

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.1 bits (110), Expect = 6e-07
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            +H D+   N+L+      KI DFGLA+ +M D                  +MAPE    
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV----VRGNARLPVKWMAPESLFE 248

Query: 57  TPISVKANVFNYGVVLLEI 75
              ++K++V++YG++L EI
Sbjct: 249 GIYTIKSDVWSYGILLWEI 267

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   N+L+ E    KI+DFGLA+ +           + T G     +MAPE   +
Sbjct: 212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFD 267

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GV+L EI
Sbjct: 268 RIYTHQSDVWSFGVLLWEI 286

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 45.7 bits (109), Expect = 7e-07
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N+L+      KI DFGL + L  +    + +    +    + APE  K    
Sbjct: 143 IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD-HYVMQEHRKVPFAWCAPESLKTRTF 201

Query: 60  SVKANVFNYGVVLLEI 75
           S  ++ + +GV L E+
Sbjct: 202 SHASDTWMFGVTLWEM 217

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 45.7 bits (109), Expect = 8e-07
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           ++H D+KP NIL+      K++DFGLA++       T  ++  T  Y APE
Sbjct: 141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPE 189

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 45.7 bits (109), Expect = 9e-07
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 2   IIHCDIKPHNILMDEFWTA-----KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
            +H D+KP N+L+     +     KI DFGLA+       R FT    T  Y  PE
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFGIPIRQFTHEIITLWYRPPE 207

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   N ++DE +T K++DFGLA+ +     + F  +    G      +MA E  + 
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEFDSVHNKTGAKLPVKWMALESLQT 270

Query: 57  TPISVKANVFNYGVVLLEI 75
              + K++V+++GV+L E+
Sbjct: 271 QKFTTKSDVWSFGVLLWEL 289

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           +H D+   N+L+      KI+DFGLAKLL  ++        G +    +MA E   +   
Sbjct: 139 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRIY 196

Query: 60  SVKANVFNYGVVLLEI 75
           + +++V++YGV + E+
Sbjct: 197 THQSDVWSYGVTVWEL 212

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H DI   NIL+      K+ DFGL++ +  +        + +       +M+PE     
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY-----YKASVTRLPIKWMSPESINFR 189

Query: 58  PISVKANVFNYGVVLLEI 75
             +  ++V+ + V + EI
Sbjct: 190 RFTTASDVWMFAVCMWEI 207

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 45.3 bits (108), Expect = 1e-06
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   NIL+ E    KI DFGLA+ +  D        R         +MAPE   +
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV----RKGDARLPLKWMAPETIFD 224

Query: 57  TPISVKANVFNYGVVLLEI 75
              +++++V+++GV+L EI
Sbjct: 225 RVYTIQSDVWSFGVLLWEI 243

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           +IH D+K  NIL+ E    K+ DFG A ++        + + GT  +MAPE
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANSFV-GTPYWMAPE 220

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 6/57 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR------GTRGYMAPE 52
            +H  +K  +IL+       +S       ++    R   +            +++PE
Sbjct: 149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE 205

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLL---MPDQTRTFTLIRGTRGYMAPE 52
           I+H D+K  N+L+      K++DFGLA+        Q   +T    T  Y  PE
Sbjct: 145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE 198

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIHCD+KP NIL+ +   +  K+ DFG +     +  R +T I+ +R Y APE
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQ-SRFYRAPE 269

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 44.4 bits (105), Expect = 2e-06
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 21/72 (29%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG----------------- 44
           IIH D+KP N L+++  + K+ DFGLA+ +  ++                          
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209

Query: 45  ----TRGYMAPE 52
               TR Y APE
Sbjct: 210 SHVVTRWYRAPE 221

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 20/71 (28%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRG----------------- 44
           ++H D+KP NIL++     K++DFGL++  +  +  T  +                    
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189

Query: 45  ---TRGYMAPE 52
              TR Y APE
Sbjct: 190 YVATRWYRAPE 200

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 10/80 (12%)

Query: 2   IIHCDIKPHNILMDE------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK 55
           IIH DIKP N+LM+           KI+D G A             I+ TR Y +PE   
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQ-TREYRSPEVLL 208

Query: 56  NTPISVKANVFNYGVVLLEI 75
             P    A++++   ++ E+
Sbjct: 209 GAPWGCGADIWSTACLIFEL 228

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 43.5 bits (103), Expect = 4e-06
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTR---GYMAPEWSKNTPI 59
           IH D+   N+L+D     KI DFGLAK + P+    + +         + APE  K    
Sbjct: 156 IHRDLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKF 214

Query: 60  SVKANVFNYGVVLLEI 75
              ++V+++GV L E+
Sbjct: 215 YYASDVWSFGVTLYEL 230

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK 62
           +H D+   N+L+ E   AK+SDFGL K     Q      ++    + APE  +    S K
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREKKFSTK 194

Query: 63  ANVFNYGVVLLEI 75
           ++V+++G++L EI
Sbjct: 195 SDVWSFGILLWEI 207

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   N+L+ E    KI+DFGLA+ +           + T G     +MAPE   +
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK----KTTNGRLPVKWMAPEALFD 233

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GV++ EI
Sbjct: 234 RVYTHQSDVWSFGVLMWEI 252

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG------YMAPEWSKN 56
           +H D+   N ++DE +T K++DFGLA+ +     + +  +    G      +MA E  + 
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEYYSVHNKTGAKLPVKWMALESLQT 206

Query: 57  TPISVKANVFNYGVVLLEI 75
              + K++V+++GV+L E+
Sbjct: 207 QKFTTKSDVWSFGVLLWEL 225

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-----QTRTFTLIRGTRGYMAPEWSKNT 57
           +H D+   N L+      KI DFG+++ +           T   IR    +M PE     
Sbjct: 155 VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIMYR 210

Query: 58  PISVKANVFNYGVVLLEI 75
             + +++V+++GV+L EI
Sbjct: 211 KFTTESDVWSFGVILWEI 228

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.0 bits (102), Expect = 6e-06
 Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
           ++H D+   NIL+ E    KISDFGL++ +  + +      + ++G     +MA E   +
Sbjct: 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV----KRSQGRIPVKWMAIESLFD 226

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GV+L EI
Sbjct: 227 HIYTTQSDVWSFGVLLWEI 245

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 43.1 bits (102), Expect = 6e-06
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   N+L+ E    KI+DFGLA+ +           + T G     +MAPE   +
Sbjct: 224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK----KTTNGRLPVKWMAPEALFD 279

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GV++ EI
Sbjct: 280 RVYTHQSDVWSFGVLMWEI 298

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 3   IHCDIKPHNILMDEFWT--------AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS 54
           IH ++   NIL+              K+SD G++  ++P        I     ++ PE  
Sbjct: 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER-IP----WVPPECI 189

Query: 55  KNTPI-SVKANVFNYGVVLLEI 75
           +N    ++  + +++G  L EI
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEI 211

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 43.2 bits (102), Expect = 7e-06
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 2   IIHCDIKPHNILMDEFWTA----KISDFGLAKLLMPDQTRTFTLIRG---TRGYMAPE 52
           ++H D+KP NIL+          KI+D G A+ L     +    +     T  Y APE
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFAR-LFNSPLKPLADLDPVVVTFWYRAPE 205

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.1 bits (102), Expect = 7e-06
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           IH D+   N ++ E  T  ++DFGL++ +           +G        ++A E   + 
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR----QGCASKLPVKWLALESLADN 214

Query: 58  PISVKANVFNYGVVLLEI 75
             +V ++V+ +GV + EI
Sbjct: 215 LYTVHSDVWAFGVTMWEI 232

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 42.9 bits (101), Expect = 8e-06
 Identities = 13/27 (48%), Positives = 20/27 (74%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLA 28
           I+H D+KP N L+++  + K+ DFGLA
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLA 203

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 42.7 bits (101), Expect = 8e-06
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKNT 57
           +H D+   N ++ +  T  ++DFGL+K +           +G        ++A E   + 
Sbjct: 169 LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR----QGRIAKMPVKWIAIESLADR 224

Query: 58  PISVKANVFNYGVVLLEI 75
             + K++V+ +GV + EI
Sbjct: 225 VYTSKSDVWAFGVTMWEI 242

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 42.4 bits (100), Expect = 1e-05
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)

Query: 2   IIHCDIKPHNILMDEFWTA--KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE 52
           IIHCD+KP NIL+     +  KI DFG +        R +  I+ +R Y +PE
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQYIQ-SRFYRSPE 228

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM-PDQTRTFTLIRGTRG-----YMAPEWSKN 56
           +H D+   N L+ +    KI DFG+++ +   D  R      G R      +M PE    
Sbjct: 180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR-----VGGRTMLPIRWMPPESILY 234

Query: 57  TPISVKANVFNYGVVLLEI 75
              + +++V+++GVVL EI
Sbjct: 235 RKFTTESDVWSFGVVLWEI 253

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 11/79 (13%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLM-PDQTRTFTLIRGTRGY-----MAPEWSKN 56
           +H D+   N ++ E +T KI DFG+ + +   D  R     +G +G      M+PE  K+
Sbjct: 160 VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR-----KGGKGLLPVRWMSPESLKD 214

Query: 57  TPISVKANVFNYGVVLLEI 75
              +  ++V+++GVVL EI
Sbjct: 215 GVFTTYSDVWSFGVVLWEI 233

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 3   IHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-----QTRTFTLIRGTRGYMAPEWSKNT 57
           +H D+   N+L+ +    KISD GL + +           +   IR    +MAPE     
Sbjct: 150 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR----WMAPEAIMYG 205

Query: 58  PISVKANVFNYGVVLLEI 75
             S+ +++++YGVVL E+
Sbjct: 206 KFSIDSDIWSYGVVLWEV 223

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 5/33 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAK-----ISDFGLAK 29
           +++ DIKP N L+    +       + DFG+ K
Sbjct: 127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 5/33 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAK-----ISDFGLAK 29
           +I+ D+KP N L+            I DF LAK
Sbjct: 126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 12/81 (14%)

Query: 3   IHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGY-----MAPEWS 54
           IH DI   N L+        AKI DFG+A+ +           +G         M PE  
Sbjct: 162 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR----KGGCAMLPVKWMPPEAF 217

Query: 55  KNTPISVKANVFNYGVVLLEI 75
                + K + +++GV+L EI
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEI 238

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 1/27 (3%), Positives = 6/27 (22%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLA 28
           +      P  + +       ++     
Sbjct: 150 VALSIDHPSRVRVSIDGDVVLAYPATM 176

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 14/82 (17%)

Query: 3   IHCDIKPHNILMDEFW---TAKISDFGLAKLLM-PDQTRTFTLIRGTRGY-----MAPEW 53
           IH DI   N L+        AKI DFG+A+ +      R     +G         M PE 
Sbjct: 203 IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR-----KGGCAMLPVKWMPPEA 257

Query: 54  SKNTPISVKANVFNYGVVLLEI 75
                 + K + +++GV+L EI
Sbjct: 258 FMEGIFTSKTDTWSFGVLLWEI 279

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 39.6 bits (93), Expect = 9e-05
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 23/86 (26%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-----QTRTFTLIRGTRGYMAPEWSKN 56
            +H D+   N L+ E    KI+DFGL++ +               IR    +M PE    
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR----WMPPE---- 246

Query: 57  TPISVKANVFN-------YGVVLLEI 75
              S+  N +        YGVVL EI
Sbjct: 247 ---SIFYNRYTTESDVWAYGVVLWEI 269

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 8/56 (14%)

Query: 2   IIHCDIKPHNILMDEFWTAKI--SDFGLAKLLMPDQT------RTFTLIRGTRGYM 49
            +H DIK  N+L+      ++  +D+GL+    P+               GT  + 
Sbjct: 172 YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFT 227

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAK 29
           I H D+KP N+L          K++DFG AK
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKI--SDFGLAKLLMPDQTR 37
            +H DIK  N+L++     ++   D+GLA    P+   
Sbjct: 173 YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH 210

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 9/57 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAK---ISDFGLAKLLMPDQT------RTFTLIRGTRGYM 49
            +H DIKP N LM     A    I DFGLAK      T      R    + GT  Y 
Sbjct: 124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 12/79 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRG-----YMAPEWSKN 56
            IH D+   NIL+ E + AKI+DFGL++    +        + T G     +MA E    
Sbjct: 163 FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYV-----KKTMGRLPVRWMAIESLNY 215

Query: 57  TPISVKANVFNYGVVLLEI 75
           +  +  ++V++YGV+L EI
Sbjct: 216 SVYTTNSDVWSYGVLLWEI 234

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 23/70 (32%)

Query: 2   IIHCDIKPHNILMDEFWTA-------------------KISDFGLAKLLMPDQTRTFTLI 42
           + H D+KP NIL                          +++DFG A     D     T++
Sbjct: 144 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEHHTTIV 200

Query: 43  RGTRGYMAPE 52
             TR Y  PE
Sbjct: 201 A-TRHYRPPE 209

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 7/37 (18%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKI--SDFGLAKLLMPDQT 36
            +H ++   NI +D    +++  + +G A    P   
Sbjct: 180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGK 216

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 37.7 bits (88), Expect = 5e-04
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 9/57 (15%)

Query: 2   IIHCDIKPHNILMDEFWTAK---ISDFGLAKLLMPDQT------RTFTLIRGTRGYM 49
            IH D+KP N LM          I DFGLAK     +T      R    + GT  Y 
Sbjct: 126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.94
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.94
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.94
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.92
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.92
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.91
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.88
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.87
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.87
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.87
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.84
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.84
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.84
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.84
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.84
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.83
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.83
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.83
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.83
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.83
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.83
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.82
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.82
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.82
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.82
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.82
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.82
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.82
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.82
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.82
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.82
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.82
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.82
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.82
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.82
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.82
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.82
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.82
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.81
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.81
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.81
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.81
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.81
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.81
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.81
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.81
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.81
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.81
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.81
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.81
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.81
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.81
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.8
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.8
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.8
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.8
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.8
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.8
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.8
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.8
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.8
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.8
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.8
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.8
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.79
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.79
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.79
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.79
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.79
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.79
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.79
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.79
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.79
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.79
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.79
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.79
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.79
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.79
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.79
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.79
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.79
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.79
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.79
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.79
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.79
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.78
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.78
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.78
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.78
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.78
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.78
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.78
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.78
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.78
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.78
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.78
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.78
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.78
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.78
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.78
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.78
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.78
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.78
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.78
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.78
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.78
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.78
3niz_A	311	Rhodanese family protein; structural genomics, str	99.78
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.77
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.77
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.77
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.77
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.77
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.77
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.77
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.77
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.77
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.77
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.77
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.77
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.77
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.77
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.77
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.77
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.77
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.76
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.76
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.76
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.76
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.76
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.76
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.76
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.76
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.76
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.76
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.76
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.76
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.76
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.76
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.76
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.76
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.76
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.76
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.76
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.76
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.76
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.76
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.76
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.76
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.76
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.75
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.75
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.75
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.75
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.75
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.75
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.75
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.75
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.75
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.75
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.75
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.75
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.75
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.75
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.75
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.75
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.75
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.75
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.74
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.74
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.74
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.74
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.74
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.74
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.74
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.74
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.74
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.74
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.74
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.74
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.73
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.73
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.73
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.73
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.73
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.73
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.73
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.73
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.73
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.72
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.72
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.72
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.72
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.72
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.72
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.72
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.72
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.72
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.72
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.72
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.71
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.71
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.71
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.71
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.71
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.71
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.71
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.7
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.7
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.7
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.7
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.7
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.7
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.7
3bhy_A	283	Death-associated protein kinase 3; death associate	99.69
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.69
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.69
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.69
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.69
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.68
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.68
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.68
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.67
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.67
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.66
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.66
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.66
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.65
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.64
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.61
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.6
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.4
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.21
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.39
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.25
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.06
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.72
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.64
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.17
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.86
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.3
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	94.68
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.53
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.28
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	94.06
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	93.93
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	93.8
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	93.71
3ats_A	357	Putative uncharacterized protein; hypothetical pro	93.17
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	91.97
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	90.45
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	90.33
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	90.3
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	89.19
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	86.9
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	86.83
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	85.85
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	85.34
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	84.45

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=2.5e-28  Score=174.46  Aligned_cols=125  Identities=28%  Similarity=0.398  Sum_probs=87.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-cceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~   76 (137)
                      .||||||||+|||++.++.+||+|||+++...... ........||+.|||||++.   ...++.++|||||||++|||.
T Consensus       152 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell  231 (307)
T 3omv_A          152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM  231 (307)
T ss_dssp             TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH
Confidence            48999999999999999999999999998653322 22233456999999999985   345889999999999999999


Q ss_pred             hcccchhhhhcchhhhhhc----cCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           77 IVLINWAYKCFIDREFNKL----VHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      +|..||............+    ..+  ..........+.++..+|            +|+++|+.+
T Consensus       232 tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          232 TGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             HSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             HCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999997543222111111    111  223334456677888889            788877754

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.94  E-value=2e-28  Score=175.21  Aligned_cols=126  Identities=19%  Similarity=0.238  Sum_probs=95.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .||||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||.+ |
T Consensus       165 ~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g  244 (308)
T 4gt4_A          165 HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG  244 (308)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence            379999999999999999999999999986532221 22234568999999999999999999999999999999997 7


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ..||..... .+-+..+...  .+.+......+.+++.+|            +|+++|+....
T Consensus       245 ~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          245 LQPYCGYSN-QDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             CCTTTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence            899975432 2223333333  233445566778889999            89999986543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.94  E-value=2.3e-28  Score=176.22  Aligned_cols=127  Identities=20%  Similarity=0.267  Sum_probs=88.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .||||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||.+ |
T Consensus       178 ~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G  257 (329)
T 4aoj_A          178 HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYG  257 (329)
T ss_dssp             TCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCC
Confidence            389999999999999999999999999986633322 22234568999999999999999999999999999999998 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      ..||..... .+.+..+...  .+.+.....++.++..+|            +|+++|+.+.+.
T Consensus       258 ~~Pf~~~~~-~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          258 KQPWYQLSN-TEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             CCTTCSSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            999975432 2222333222  223333445677888899            899999876543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.94  E-value=1.7e-27  Score=169.01  Aligned_cols=82  Identities=29%  Similarity=0.419  Sum_probs=69.6

Q ss_pred             CeEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      +|+||||||+|||++. ++.+||+|||+++.....   .....+||+.|+|||++.+ .++.++||||+||++|||.+|.
T Consensus       151 ~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~  226 (290)
T 3fpq_A          151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             CCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEEecccChhheeEECCCCCEEEEeCcCCEeCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCC
Confidence            5999999999999974 789999999999854322   2344579999999998864 6899999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       227 ~Pf~~~~  233 (290)
T 3fpq_A          227 YPYSECQ  233 (290)
T ss_dssp             CTTTTCS
T ss_pred             CCCCCCC
Confidence            9997543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.94  E-value=2.9e-28  Score=177.18  Aligned_cols=125  Identities=26%  Similarity=0.294  Sum_probs=92.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .||||||||+|||++.++.+||+|||+++........ ......||+.|||||++.+..++.++|||||||++|||++ |
T Consensus       205 ~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G  284 (353)
T 4ase_A          205 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  284 (353)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred             CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCC
Confidence            3799999999999999999999999999876433322 2234458999999999999999999999999999999987 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||......+.....+.+.  ...+.....++.++..+|            ++++.|+..
T Consensus       285 ~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l  345 (353)
T 4ase_A          285 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  345 (353)
T ss_dssp             CCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            99997544333222222222  222233344567777888            777777654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.93  E-value=5.4e-28  Score=172.29  Aligned_cols=124  Identities=19%  Similarity=0.275  Sum_probs=93.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .||||||||+|||++.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||.+ |
T Consensus       148 ~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G  227 (299)
T 4asz_A          148 HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYG  227 (299)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCC
Confidence            48999999999999999999999999998653322211 222358999999999999999999999999999999997 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||..... .+-+..+...  ...+.....++.++..+|            ++.++|+..
T Consensus       228 ~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          228 KQPWYQLSN-NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             CCTTTTSCH-HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999975432 2223333322  223334455677888899            888888765

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=4.7e-27  Score=167.68  Aligned_cols=125  Identities=26%  Similarity=0.270  Sum_probs=86.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce---eeecccccceecccccCCC------CCCcccceeeHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT---FTLIRGTRGYMAPEWSKNT------PISVKANVFNYGVV   71 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~------~~~~~~dv~s~G~~   71 (137)
                      +||||||||+|||++.++.+||+|||+++.........   .....||+.|+|||++.+.      .++.++|||||||+
T Consensus       128 ~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv  207 (303)
T 3hmm_A          128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  207 (303)
T ss_dssp             CEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred             CEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence            48999999999999999999999999998764333221   1234699999999998653      35678999999999


Q ss_pred             HHHHHhcccchhhhhcch-------------hhhhh-ccC----C----ccccHHHHHHHHHHHHHh------------H
Q 042492           72 LLEIEIVLINWAYKCFID-------------REFNK-LVH----D----EEVNKKTLENMIKVRLWC------------S  117 (137)
Q Consensus        72 l~el~~~~~~~~~~~~~~-------------~~~~~-~~~----~----~~~~~~~~~~~~~~~l~C------------~  117 (137)
                      +|||.++..||......+             +.+.. +..    +    .....+....+.+++.+|            +
T Consensus       208 l~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e  287 (303)
T 3hmm_A          208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             HHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence            999999876654221110             11111 111    1    112335667788999999            8


Q ss_pred             HHHHHhcC
Q 042492          118 VVMMLEGI  125 (137)
Q Consensus       118 v~~~L~~~  125 (137)
                      |+++|+.+
T Consensus       288 i~~~L~~l  295 (303)
T 3hmm_A          288 IKKTLSQL  295 (303)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=9.5e-27  Score=168.02  Aligned_cols=85  Identities=31%  Similarity=0.411  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcc----eeeecccccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTR----TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      ||||||||+|||++.++ .+||+|||+++.+......    .....+||+.|+|||++.+..++.++||||+||++|||+
T Consensus       171 IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml  250 (336)
T 4g3f_A          171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML  250 (336)
T ss_dssp             EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence            89999999999999887 6999999999876432211    122346999999999999999999999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       251 tG~~Pf~~~~  260 (336)
T 4g3f_A          251 NGCHPWTQYF  260 (336)
T ss_dssp             HSSCSSTTTC
T ss_pred             HCcCCCCCCC
Confidence            9999997543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.93  E-value=1.7e-26  Score=167.21  Aligned_cols=84  Identities=25%  Similarity=0.379  Sum_probs=73.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||||||||+|||++.++.+||+|||+++.+..... .....+||+.|+|||++.+..|+.++||||+||++|||.+|..|
T Consensus       191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  269 (346)
T 4fih_A          191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  269 (346)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            89999999999999999999999999987643322 23345799999999999988999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       270 F~~~~  274 (346)
T 4fih_A          270 YFNEP  274 (346)
T ss_dssp             TTTSC
T ss_pred             CCCcC
Confidence            97543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.92  E-value=8.8e-27  Score=166.59  Aligned_cols=84  Identities=30%  Similarity=0.510  Sum_probs=73.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+|||++.++.+||+|||+++.+..... ......+||+.|+|||++.+..++.++|+||+||++|||.+|..
T Consensus       153 IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~  232 (311)
T 4aw0_A          153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP  232 (311)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999999998743332 22345679999999999998889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       233 PF~~~  237 (311)
T 4aw0_A          233 PFRAG  237 (311)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            99754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=7.7e-27  Score=166.58  Aligned_cols=84  Identities=33%  Similarity=0.458  Sum_probs=71.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       147 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~P  225 (304)
T 3ubd_A          147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP  225 (304)
T ss_dssp             CCCSSCCGGGEEECTTSCEEEESSEEEEC-----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcCCCCCHHHeEEcCCCCEEecccccceeccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCC
Confidence            79999999999999999999999999986533222 22345699999999999988999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       226 F~~~~  230 (304)
T 3ubd_A          226 FQGKD  230 (304)
T ss_dssp             SCCSS
T ss_pred             CCCcC
Confidence            97543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.92  E-value=3.3e-27  Score=171.19  Aligned_cols=84  Identities=30%  Similarity=0.486  Sum_probs=72.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++..... .......+||+.|+|||++.+..++.++||||+||++|||++|..|
T Consensus       146 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~P  224 (350)
T 4b9d_A          146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHA  224 (350)
T ss_dssp             CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeeccCCHHHEEECCCCCEEEcccccceeecCC-cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            899999999999999999999999999865321 1122345699999999999998999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       225 F~~~~  229 (350)
T 4b9d_A          225 FEAGS  229 (350)
T ss_dssp             CCCSS
T ss_pred             CCCcC
Confidence            97543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.91  E-value=1.1e-25  Score=166.58  Aligned_cols=84  Identities=26%  Similarity=0.398  Sum_probs=73.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      ||||||||+|||++.++.+||+|||+++.+...... ....+||+.|||||++.+..|+.++||||+||++|||++|..|
T Consensus       268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~P  346 (423)
T 4fie_A          268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP  346 (423)
T ss_dssp             EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             eecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            899999999999999999999999999876433222 2345699999999999998999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       347 F~~~~  351 (423)
T 4fie_A          347 YFNEP  351 (423)
T ss_dssp             TTTSC
T ss_pred             CCCcC
Confidence            97543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=1.3e-25  Score=159.98  Aligned_cols=80  Identities=31%  Similarity=0.512  Sum_probs=61.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-----------eeeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-----------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      |+||||||+|||++.++.+||+|||+++........           ..+..+||+.|+|||++.+..++.++||||+||
T Consensus       139 IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGv  218 (299)
T 4g31_A          139 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGL  218 (299)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHH
T ss_pred             CccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHH
Confidence            799999999999999999999999999876432211           122346999999999999999999999999999


Q ss_pred             HHHHHHhcccchhh
Q 042492           71 VLLEIEIVLINWAY   84 (137)
Q Consensus        71 ~l~el~~~~~~~~~   84 (137)
                      ++|||++   ||..
T Consensus       219 ilyell~---Pf~~  229 (299)
T 4g31_A          219 ILFELLY---PFST  229 (299)
T ss_dssp             HHHHHHS---CCSS
T ss_pred             HHHHHcc---CCCC
Confidence            9999975   6643

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.91  E-value=9.1e-26  Score=159.05  Aligned_cols=82  Identities=29%  Similarity=0.519  Sum_probs=62.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......||+.|+|||++.+..+ +.++|+||+||++++|.+|..
T Consensus       133 IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~  210 (275)
T 3hyh_A          133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL  210 (275)
T ss_dssp             CCCCCCCTTTEEECTTCCEEECCSSCC-----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccccCChHHeEECCCCCEEEeecCCCeecCCCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCC
Confidence            7999999999999999999999999998653322  2234569999999999988776 578999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       211 PF~~~  215 (275)
T 3hyh_A          211 PFDDE  215 (275)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            99754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=7.8e-24  Score=163.81  Aligned_cols=83  Identities=31%  Similarity=0.432  Sum_probs=71.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ||||||||+|||++.++++||+|||+++.......   ...+||+.|+|||++.. ..++.++|+||+||++|||++|..
T Consensus       313 IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~---~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~  389 (689)
T 3v5w_A          313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS  389 (689)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccCCchHHeEEeCCCCEEecccceeeecCCCCC---CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            89999999999999999999999999987643332   34569999999999864 568999999999999999999999


Q ss_pred             chhhhhc
Q 042492           81 NWAYKCF   87 (137)
Q Consensus        81 ~~~~~~~   87 (137)
                      ||.....
T Consensus       390 PF~~~~~  396 (689)
T 3v5w_A          390 PFRQHKT  396 (689)
T ss_dssp             TTCGGGC
T ss_pred             CCCCCCh
Confidence            9976543

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.88  E-value=7e-24  Score=154.55  Aligned_cols=84  Identities=25%  Similarity=0.358  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCc---------------------------ceeeecccccceecccc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQT---------------------------RTFTLIRGTRGYMAPEW   53 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~---------------------------~~~~~~~~~~~~~ape~   53 (137)
                      |+||||||+|||++.+ +.+||+|||+++.......                           ......+||+.|+|||+
T Consensus       138 IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~  217 (361)
T 4f9c_A          138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEV  217 (361)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHH
T ss_pred             eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHH
Confidence            7999999999999876 7899999999986532211                           11123469999999999


Q ss_pred             cCCC-CCCcccceeeHHHHHHHHHhcccchhhh
Q 042492           54 SKNT-PISVKANVFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        54 ~~~~-~~~~~~dv~s~G~~l~el~~~~~~~~~~   85 (137)
                      +.+. .++.++|+||+||+++||.+|..||...
T Consensus       218 l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          218 LTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             HcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            8765 4788999999999999999999999644

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.87  E-value=8.8e-23  Score=145.83  Aligned_cols=125  Identities=40%  Similarity=0.593  Sum_probs=98.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.++|+|||+++..............||..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       154 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  233 (326)
T 3uim_A          154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR  233 (326)
T ss_dssp             CEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCC
T ss_pred             CeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCC
Confidence            38999999999999999999999999998765444444445568999999999988888999999999999999999999


Q ss_pred             chhhhhcch----------------hhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFID----------------REFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~----------------~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||......+                .....+.+.   ..........+.++..+|            +++++|++.
T Consensus       234 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          234 AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             SBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             cccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            996432211                111222222   345678888999999999            999999875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.87  E-value=1.6e-23  Score=154.41  Aligned_cols=84  Identities=30%  Similarity=0.385  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC---cceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~   77 (137)
                      ||||||||+|||++.++.+|++|||+++.+....   .......+||+.|+|||++.+. .++.++|+||+||+++||.+
T Consensus       179 iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~  258 (398)
T 4b99_A          179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA  258 (398)
T ss_dssp             CBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred             CcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH
Confidence            7999999999999999999999999998653221   1123456799999999998765 46889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       259 G~~pF~g~  266 (398)
T 4b99_A          259 RRQLFPGK  266 (398)
T ss_dssp             TSCSSCCS
T ss_pred             CCCCCCCC
Confidence            99999654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.87  E-value=3.7e-23  Score=147.52  Aligned_cols=126  Identities=24%  Similarity=0.416  Sum_probs=81.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +|+||||||+||+++.++.+||+|||+++...... .......||..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       159 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  237 (309)
T 3p86_A          159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQ  237 (309)
T ss_dssp             CCCCTTCCGGGEEECTTCCEEECCCC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCC
T ss_pred             CEECCCCChhhEEEeCCCcEEECCCCCCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999987543221 11233458999999999998889999999999999999999999


Q ss_pred             chhhhhcchhhhhhcc---CCccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           81 NWAYKCFIDREFNKLV---HDEEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      ||......+ ....+.   .....+.....++.++..+|            ++.++|+....-
T Consensus       238 Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          238 PWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             TTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            997543222 111111   11122222223455666677            888888876443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.84  E-value=1.1e-21  Score=142.53  Aligned_cols=84  Identities=21%  Similarity=0.243  Sum_probs=71.4

Q ss_pred             eEecCCCCCCEEeCC-----------CCcEEEEecCCceecCC-CCcceeeecccccceecccccCCCCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDE-----------FWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~-----------~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G   69 (137)
                      |+||||||+||+++.           ++.+||+|||+++.... ..........||..|+|||++.+..++.++|+||+|
T Consensus       193 ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  272 (365)
T 3e7e_A          193 IIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVA  272 (365)
T ss_dssp             EECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHH
T ss_pred             eecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHH
Confidence            799999999999988           89999999999976532 222233455699999999999988899999999999


Q ss_pred             HHHHHHHhcccchhhh
Q 042492           70 VVLLEIEIVLINWAYK   85 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~   85 (137)
                      ++++||.+|..||...
T Consensus       273 ~il~elltg~~pf~~~  288 (365)
T 3e7e_A          273 ATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             HHHHHHHHSSCCCEEE
T ss_pred             HHHHHHHhCCCccccC
Confidence            9999999999888543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.84  E-value=6.1e-22  Score=140.11  Aligned_cols=85  Identities=34%  Similarity=0.486  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++..............||+.|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       132 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p  211 (294)
T 4eqm_A          132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP  211 (294)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999876533322223344589999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       212 f~~~~  216 (294)
T 4eqm_A          212 FNGET  216 (294)
T ss_dssp             SCSSC
T ss_pred             CCCCC
Confidence            97544

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.84  E-value=4.1e-22  Score=140.62  Aligned_cols=123  Identities=26%  Similarity=0.330  Sum_probs=87.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce---eeecccccceecccccCCC------CCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT---FTLIRGTRGYMAPEWSKNT------PISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~------~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||+++.++.+||+|||+++.........   .....||..|+|||.+.+.      .++.++|+||+|+++
T Consensus       134 ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il  213 (301)
T 3q4u_A          134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL  213 (301)
T ss_dssp             EECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             eecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHH
Confidence            7999999999999999999999999998664333221   1233589999999998765      345689999999999


Q ss_pred             HHHHhc----------ccchhhhhcch---hhhhhccC--C-------ccccHHHHHHHHHHHHHh------------HH
Q 042492           73 LEIEIV----------LINWAYKCFID---REFNKLVH--D-------EEVNKKTLENMIKVRLWC------------SV  118 (137)
Q Consensus        73 ~el~~~----------~~~~~~~~~~~---~~~~~~~~--~-------~~~~~~~~~~~~~~~l~C------------~v  118 (137)
                      +||.++          ..||......+   ......+.  .       ..........+.++..+|            ++
T Consensus       214 ~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i  293 (301)
T 3q4u_A          214 WEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI  293 (301)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence            999998          67775432221   11111111  1       112345667788888888            77


Q ss_pred             HHHHhc
Q 042492          119 VMMLEG  124 (137)
Q Consensus       119 ~~~L~~  124 (137)
                      .++|+.
T Consensus       294 ~~~L~~  299 (301)
T 3q4u_A          294 KKTLTK  299 (301)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            777764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.84  E-value=7e-22  Score=143.47  Aligned_cols=85  Identities=19%  Similarity=0.264  Sum_probs=71.2

Q ss_pred             CeEecCCCCCCEEeC--CCCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      .|+||||||+||+++  .++.+||+|||+++........      ......||..|+|||.+.+..++.++|+||||+++
T Consensus       172 ~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  251 (364)
T 3op5_A          172 EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCM  251 (364)
T ss_dssp             TEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             CeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHH
Confidence            389999999999998  8899999999999876322111      11233489999999999988899999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      +||.+|..||...
T Consensus       252 ~el~~g~~Pf~~~  264 (364)
T 3op5_A          252 IQWLTGHLPWEDN  264 (364)
T ss_dssp             HHHHHSCCTTGGG
T ss_pred             HHHHhCCCCcccc
Confidence            9999999999854

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.84  E-value=7.8e-22  Score=151.15  Aligned_cols=83  Identities=28%  Similarity=0.457  Sum_probs=71.8

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+|||++.  .+.+||+|||+++.+....  .....+||+.|+|||++.+..++.++|+||+||++|||++|.
T Consensus       276 iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~  353 (573)
T 3uto_A          276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL  353 (573)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             eeeccCChhhccccCCCCCCEEEeeccceeEccCCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            799999999999985  4889999999999874432  234456999999999999999999999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       354 ~Pf~~~~  360 (573)
T 3uto_A          354 SPFGGEN  360 (573)
T ss_dssp             CSSCCSS
T ss_pred             CCCCCcC
Confidence            9997543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.83  E-value=1.6e-22  Score=144.98  Aligned_cols=123  Identities=20%  Similarity=0.252  Sum_probs=86.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|+||||++++|+.+ |
T Consensus       137 ~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  216 (327)
T 3poz_A          137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG  216 (327)
T ss_dssp             TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcC
Confidence            3799999999999999999999999999876433322 1223346778999999988889999999999999999998 9


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||......  .+...+..   ..........+.++..+|            +++++|+..
T Consensus       217 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~  276 (327)
T 3poz_A          217 SKPYDGIPAS--EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  276 (327)
T ss_dssp             CCTTTTCCGG--GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred             CCCccCCCHH--HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            9999754322  22222211   122223334566777788            777776543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.83  E-value=8.8e-22  Score=146.64  Aligned_cols=85  Identities=29%  Similarity=0.412  Sum_probs=72.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.+||+|||+++..............||+.|+|||++.     ...++.++|+||+|++++||.
T Consensus       196 iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ell  275 (437)
T 4aw2_A          196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML  275 (437)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHH
T ss_pred             eEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHH
Confidence            799999999999999999999999999876544443344457999999999986     456788999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       276 tG~~Pf~~~~  285 (437)
T 4aw2_A          276 YGETPFYAES  285 (437)
T ss_dssp             HSSCTTCCSS
T ss_pred             hCCCCCCCCC
Confidence            9999997543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.83  E-value=4.1e-21  Score=137.10  Aligned_cols=128  Identities=28%  Similarity=0.467  Sum_probs=95.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+|++|||+++....... .......|+..|+|||.+.+..++.++|+||+|+++++|.+|.
T Consensus       159 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~  238 (321)
T 2qkw_B          159 AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR  238 (321)
T ss_dssp             TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCC
T ss_pred             CeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCC
Confidence            379999999999999999999999999986532221 1223345889999999998888899999999999999999999


Q ss_pred             cchhhhhcch--------------hhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           80 INWAYKCFID--------------REFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        80 ~~~~~~~~~~--------------~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      .||......+              +.+...+++   ..........+.++..+|            ++.+.|+...++
T Consensus       239 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          239 SAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             TTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            9886432211              112223333   234567788888999999            888888765444

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=2.1e-21  Score=140.16  Aligned_cols=83  Identities=29%  Similarity=0.422  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       126 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  204 (337)
T 1o6l_A          126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             eecCcCCHHHEEECCCCCEEEeeccchhhcccCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCC
Confidence            79999999999999999999999999986432222 22344689999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       205 f~~~  208 (337)
T 1o6l_A          205 FYNQ  208 (337)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.83  E-value=1.3e-21  Score=138.91  Aligned_cols=84  Identities=33%  Similarity=0.470  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-------------eeecccccceecccccCCCCCCcccceeeH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-------------FTLIRGTRGYMAPEWSKNTPISVKANVFNY   68 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-------------~~~~~~~~~~~ape~~~~~~~~~~~dv~s~   68 (137)
                      |+||||||+||+++.++.+||+|||+++.........             .....||+.|+|||.+.+..++.++|+||+
T Consensus       129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  208 (310)
T 3s95_A          129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF  208 (310)
T ss_dssp             EECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred             ccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHH
Confidence            7999999999999999999999999998764322211             013458999999999998889999999999


Q ss_pred             HHHHHHHHhcccchhhh
Q 042492           69 GVVLLEIEIVLINWAYK   85 (137)
Q Consensus        69 G~~l~el~~~~~~~~~~   85 (137)
                      |++++++.++..||...
T Consensus       209 G~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          209 GIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             HHHHHHHHHTCCSSTTT
T ss_pred             HHHHHHHhcCCCCCcch
Confidence            99999999998888654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.83  E-value=2.3e-21  Score=141.35  Aligned_cols=123  Identities=24%  Similarity=0.237  Sum_probs=87.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|+||||+++|||.+ |.
T Consensus       224 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~  303 (370)
T 2psq_A          224 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG  303 (370)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999866432221 1122346778999999988889999999999999999998 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||...... +....+...  ...+......+.++..+|            ++++.|+.+
T Consensus       304 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          304 SPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             CSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            998754322 222222222  122222334456666677            777777654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.83  E-value=3.4e-21  Score=149.96  Aligned_cols=95  Identities=28%  Similarity=0.382  Sum_probs=76.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|+++|||++|..|
T Consensus       463 IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~P  541 (674)
T 3pfq_A          463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  541 (674)
T ss_dssp             EECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eEeccCChhhEEEcCCCcEEEeecceeeccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCC
Confidence            89999999999999999999999999986432222 23345699999999999988999999999999999999999999


Q ss_pred             hhhhhcchhhhhhccCC
Q 042492           82 WAYKCFIDREFNKLVHD   98 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~   98 (137)
                      |..... .+.+..+...
T Consensus       542 f~~~~~-~~~~~~i~~~  557 (674)
T 3pfq_A          542 FEGEDE-DELFQSIMEH  557 (674)
T ss_dssp             SCCSSH-HHHHHHHHSS
T ss_pred             CCCCCH-HHHHHHHHhC
Confidence            975432 2334444443

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.83  E-value=2.3e-21  Score=139.92  Aligned_cols=85  Identities=21%  Similarity=0.284  Sum_probs=70.4

Q ss_pred             CeEecCCCCCCEEeCCCC--cEEEEecCCceecCCCCc------ceeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFW--TAKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~--~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      .|+||||||+||+++.++  .+||+|||+++.......      .......|+..|+|||.+.+..++.++|+||+|+++
T Consensus       171 ~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  250 (345)
T 2v62_A          171 EYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM  250 (345)
T ss_dssp             TEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             CeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence            379999999999998776  999999999987632211      111234589999999999888889999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      +||.+|..||...
T Consensus       251 ~ell~g~~pf~~~  263 (345)
T 2v62_A          251 LRWLCGKLPWEQN  263 (345)
T ss_dssp             HHHHHSSCTTGGG
T ss_pred             HHHHhCCCCcccc
Confidence            9999999999653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=1.8e-21  Score=143.40  Aligned_cols=82  Identities=26%  Similarity=0.378  Sum_probs=71.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       174 ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~P  252 (396)
T 4dc2_A          174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  252 (396)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEeccCCHHHEEECCCCCEEEeecceeeecccCCC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999986322222 23345699999999999998899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       253 f~~  255 (396)
T 4dc2_A          253 FDI  255 (396)
T ss_dssp             STT
T ss_pred             Ccc
Confidence            963

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.82  E-value=2.3e-21  Score=140.78  Aligned_cols=83  Identities=30%  Similarity=0.404  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       142 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  220 (353)
T 2i0e_A          142 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP  220 (353)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCC
Confidence            79999999999999999999999999986432222 22345699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       221 f~~~  224 (353)
T 2i0e_A          221 FEGE  224 (353)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.82  E-value=1.9e-21  Score=143.74  Aligned_cols=85  Identities=26%  Similarity=0.378  Sum_probs=72.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC----CCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP----ISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~----~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++..............||+.|+|||++.+..    ++.++|+||+|++++||.+
T Consensus       189 ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~  268 (410)
T 3v8s_A          189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV  268 (410)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH
T ss_pred             eEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh
Confidence            799999999999999999999999999876443333334557999999999987654    6789999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       269 G~~Pf~~~~  277 (410)
T 3v8s_A          269 GDTPFYADS  277 (410)
T ss_dssp             SSCTTCCSS
T ss_pred             CCCCCCCCC
Confidence            999997543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.82  E-value=2.6e-21  Score=137.07  Aligned_cols=84  Identities=27%  Similarity=0.445  Sum_probs=72.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++........ .....||..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       137 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  215 (297)
T 3fxz_A          137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (297)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876433322 2344689999999999888899999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       216 f~~~~  220 (297)
T 3fxz_A          216 YLNEN  220 (297)
T ss_dssp             TTTSC
T ss_pred             CCCCC
Confidence            97543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.82  E-value=9.1e-22  Score=142.89  Aligned_cols=84  Identities=27%  Similarity=0.347  Sum_probs=68.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       145 ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  223 (353)
T 3txo_A          145 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP  223 (353)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccCCCHHHEEECCCCCEEEccccceeecccCCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCC
Confidence            79999999999999999999999999985432222 22345699999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       224 f~~~~  228 (353)
T 3txo_A          224 FEAEN  228 (353)
T ss_dssp             SCCSS
T ss_pred             CCCCC
Confidence            97543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.82  E-value=4.7e-21  Score=133.37  Aligned_cols=126  Identities=19%  Similarity=0.275  Sum_probs=88.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|++++++.+ +..
T Consensus       125 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  204 (268)
T 3sxs_A          125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM  204 (268)
T ss_dssp             EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCC
T ss_pred             eecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999998765443333333345678999999988888999999999999999998 899


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      ||......+ ....+...  ...+......+.++..+|            ++.+.|+.....
T Consensus       205 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          205 PYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             TTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CccccChHH-HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            996543322 12222211  111111123455666677            788888776543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.82  E-value=2.6e-21  Score=143.13  Aligned_cols=85  Identities=27%  Similarity=0.375  Sum_probs=71.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-------CCCCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-------NTPISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-------~~~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||+++.++.+||+|||+++..............||+.|+|||++.       ...++.++|+||+|++++|
T Consensus       183 iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilye  262 (412)
T 2vd5_A          183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE  262 (412)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHH
T ss_pred             eeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHH
Confidence            799999999999999999999999999876544333333456999999999886       3467889999999999999


Q ss_pred             HHhcccchhhhh
Q 042492           75 IEIVLINWAYKC   86 (137)
Q Consensus        75 l~~~~~~~~~~~   86 (137)
                      |.+|..||....
T Consensus       263 lltG~~Pf~~~~  274 (412)
T 2vd5_A          263 MFYGQTPFYADS  274 (412)
T ss_dssp             HHHSSCTTCCSS
T ss_pred             HHhCCCCCCCCC
Confidence            999999997543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.82  E-value=1.5e-21  Score=139.90  Aligned_cols=126  Identities=21%  Similarity=0.270  Sum_probs=87.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.++|+|||+++.........  .....++..|+|||.+.+..++.++|+||+|+++++|++ |
T Consensus       172 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g  251 (325)
T 3kul_A          172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYG  251 (325)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             eeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998764332211  122235678999999988888999999999999999998 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITDI  128 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~~  128 (137)
                      ..||...... +....+...  ..........+.++...|            +++++|+.....
T Consensus       252 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          252 ERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             CCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            9998644322 222222222  122223334566677777            888888776443

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.82  E-value=1.3e-21  Score=145.97  Aligned_cols=125  Identities=22%  Similarity=0.334  Sum_probs=89.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++..............++..|+|||.+....++.++|+||||+++|||.+ |..
T Consensus       305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~  384 (454)
T 1qcf_A          305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRI  384 (454)
T ss_dssp             CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998653221111122335678999999988889999999999999999998 899


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ||...... +....+...  ...+......+.++..+|            ++.++|+....
T Consensus       385 P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          385 PYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             SSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            99653321 111222111  112223345567777888            88899987643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.82  E-value=2.7e-21  Score=134.68  Aligned_cols=83  Identities=33%  Similarity=0.414  Sum_probs=64.0

Q ss_pred             CeEecCCCCCCEEeCC--------CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            1 LIIHCDIKPHNILMDE--------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         1 ~iiHrdlk~~nill~~--------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      +|+||||||+||+++.        ++.++++|||+++.......   ....|+..|+|||.+.+..++.++|+||+|+++
T Consensus       128 ~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  204 (271)
T 3dtc_A          128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLL  204 (271)
T ss_dssp             CCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred             ceeecCCchHHEEEecccccccccCcceEEccCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHH
Confidence            4899999999999985        67799999999976533222   233589999999999888889999999999999


Q ss_pred             HHHHhcccchhhhh
Q 042492           73 LEIEIVLINWAYKC   86 (137)
Q Consensus        73 ~el~~~~~~~~~~~   86 (137)
                      +++.++..||....
T Consensus       205 ~~l~~g~~p~~~~~  218 (271)
T 3dtc_A          205 WELLTGEVPFRGID  218 (271)
T ss_dssp             HHHHHCCCTTTTSC
T ss_pred             HHHHhCCCCCCCCC
Confidence            99999999997543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.82  E-value=4.9e-21  Score=136.98  Aligned_cols=83  Identities=33%  Similarity=0.407  Sum_probs=67.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCC-----CCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNT-----PISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~-----~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.++.+||+|||+++........ ......||..|+|||.+.+.     .++.++|+||+|+++|||
T Consensus       152 ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el  231 (322)
T 3soc_A          152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL  231 (322)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHH
Confidence            799999999999999999999999999876433221 12234589999999998763     455678999999999999


Q ss_pred             Hhcccchhh
Q 042492           76 EIVLINWAY   84 (137)
Q Consensus        76 ~~~~~~~~~   84 (137)
                      .+|..||..
T Consensus       232 ~tg~~pf~~  240 (322)
T 3soc_A          232 ASRCTAADG  240 (322)
T ss_dssp             HTTBTTSSS
T ss_pred             HhCCCCCCC
Confidence            999888854

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.82  E-value=3.4e-21  Score=139.52  Aligned_cols=83  Identities=30%  Similarity=0.397  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       139 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  217 (345)
T 1xjd_A          139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP  217 (345)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCC
Confidence            79999999999999999999999999986432222 22345699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       218 f~~~  221 (345)
T 1xjd_A          218 FHGQ  221 (345)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.82  E-value=4.8e-21  Score=134.52  Aligned_cols=82  Identities=24%  Similarity=0.382  Sum_probs=67.5

Q ss_pred             CeEecCCCCCCEEeCCCCc-----EEEEecCCceecCCCCcceeeecccccceecccccC--CCCCCcccceeeHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWT-----AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK--NTPISVKANVFNYGVVLL   73 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~-----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~--~~~~~~~~dv~s~G~~l~   73 (137)
                      ||+||||||+||+++.++.     +|++|||+++....    ......|+..|+|||.+.  ...++.++|+||+|++++
T Consensus       144 ~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~  219 (287)
T 4f0f_A          144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY  219 (287)
T ss_dssp             CCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHH
T ss_pred             CeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHH
Confidence            5899999999999987766     99999999875422    223446899999999983  445678999999999999


Q ss_pred             HHHhcccchhhhh
Q 042492           74 EIEIVLINWAYKC   86 (137)
Q Consensus        74 el~~~~~~~~~~~   86 (137)
                      +|.+|..||....
T Consensus       220 ~l~~g~~pf~~~~  232 (287)
T 4f0f_A          220 TILTGEGPFDEYS  232 (287)
T ss_dssp             HHHHSSCTTTTCC
T ss_pred             HHHcCCCCCcccc
Confidence            9999999997544

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.3e-20  Score=134.88  Aligned_cols=124  Identities=26%  Similarity=0.361  Sum_probs=85.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce---eeecccccceecccccCCCCCCcc------cceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT---FTLIRGTRGYMAPEWSKNTPISVK------ANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~------~dv~s~G~~l   72 (137)
                      |+||||||+||+++.++.+||+|||+++.........   .....||..|+|||.+.+...+.+      +|+||+|+++
T Consensus       163 ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il  242 (337)
T 3mdy_A          163 IAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL  242 (337)
T ss_dssp             EECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHH
T ss_pred             EEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHH
Confidence            7999999999999999999999999998664332211   123458999999999977665554      8999999999


Q ss_pred             HHHHhc----------ccchhhhhcch---hhhhhccC-----C----ccccHHHHHHHHHHHHHh------------HH
Q 042492           73 LEIEIV----------LINWAYKCFID---REFNKLVH-----D----EEVNKKTLENMIKVRLWC------------SV  118 (137)
Q Consensus        73 ~el~~~----------~~~~~~~~~~~---~~~~~~~~-----~----~~~~~~~~~~~~~~~l~C------------~v  118 (137)
                      |||.+|          ..||......+   ......+.     +    .........++.++..+|            ++
T Consensus       243 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el  322 (337)
T 3mdy_A          243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV  322 (337)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence            999999          55665432211   11111111     1    111236677788888899            77


Q ss_pred             HHHHhcC
Q 042492          119 VMMLEGI  125 (137)
Q Consensus       119 ~~~L~~~  125 (137)
                      .+.|+..
T Consensus       323 l~~L~~l  329 (337)
T 3mdy_A          323 KKTLAKM  329 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.82  E-value=2.8e-21  Score=144.19  Aligned_cols=125  Identities=20%  Similarity=0.314  Sum_probs=85.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++..............++..|+|||.+.+..++.++|+||||+++|||.+ |..
T Consensus       301 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~  380 (452)
T 1fmk_A          301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  380 (452)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998654322222223346778999999988889999999999999999998 889


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ||...... +....+...  ...+......+.++..+|            ++.++|+....
T Consensus       381 P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          381 PYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             SSTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            98643321 122222222  122223345567777888            88899987643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.82  E-value=1.2e-21  Score=141.55  Aligned_cols=124  Identities=27%  Similarity=0.302  Sum_probs=86.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.++|+|||+++....... .......||..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       214 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  293 (359)
T 3vhe_A          214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA  293 (359)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCC
Confidence            79999999999999999999999999986533222 22233457889999999988889999999999999999997 99


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||......+.....+...  ...+.....++.++..+|            ++.++|+..
T Consensus       294 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          294 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             CSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            9997544332222222211  111112223455666677            777777653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.82  E-value=1.9e-21  Score=142.11  Aligned_cols=123  Identities=25%  Similarity=0.251  Sum_probs=86.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       212 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~  291 (382)
T 3tt0_A          212 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG  291 (382)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999986533222 11223346788999999988889999999999999999998 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||...... +....+...  ...+.....++.++..+|            ++++.|+.+
T Consensus       292 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          292 SPYPGVPVE-ELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             CSSTTCCHH-HHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            998654322 122222221  111122233455666677            777777765

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.81  E-value=6.8e-21  Score=136.49  Aligned_cols=84  Identities=24%  Similarity=0.310  Sum_probs=71.4

Q ss_pred             eEecCCCCCCEEeCCCCc-----EEEEecCCceecCCCCcce------eeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWT-----AKISDFGLAKLLMPDQTRT------FTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~-----~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      |+||||||+||+++.++.     +||+|||+++.........      .....||..|+|||.+.+..++.++|+||+|+
T Consensus       126 iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  205 (330)
T 2izr_A          126 LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGH  205 (330)
T ss_dssp             EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHH
Confidence            799999999999998877     9999999998764332211      13456899999999999888999999999999


Q ss_pred             HHHHHHhcccchhhh
Q 042492           71 VLLEIEIVLINWAYK   85 (137)
Q Consensus        71 ~l~el~~~~~~~~~~   85 (137)
                      +++||.+|..||...
T Consensus       206 il~ell~g~~Pf~~~  220 (330)
T 2izr_A          206 MFMYFLRGSLPWQGL  220 (330)
T ss_dssp             HHHHHHHSSCTTTTC
T ss_pred             HHHHHhcCCCCcccc
Confidence            999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.81  E-value=3.1e-21  Score=141.02  Aligned_cols=83  Identities=31%  Similarity=0.448  Sum_probs=71.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       160 ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P  238 (373)
T 2r5t_A          160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP  238 (373)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ceecCCCHHHEEECCCCCEEEeeCccccccccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999875422222 22345699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       239 f~~~  242 (373)
T 2r5t_A          239 FYSR  242 (373)
T ss_dssp             TCCS
T ss_pred             CCCC
Confidence            9654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.81  E-value=2.9e-21  Score=143.77  Aligned_cols=84  Identities=27%  Similarity=0.397  Sum_probs=70.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..
T Consensus       269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  347 (446)
T 4ejn_A          269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL  347 (446)
T ss_dssp             CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCC
Confidence            389999999999999999999999999875432222 2234569999999999988889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       348 Pf~~~  352 (446)
T 4ejn_A          348 PFYNQ  352 (446)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            99654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.81  E-value=3.8e-21  Score=145.00  Aligned_cols=124  Identities=23%  Similarity=0.335  Sum_probs=89.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++..............++..|+|||.+.+..++.++|+||||+++|||.+ |..
T Consensus       339 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~  418 (495)
T 1opk_A          339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  418 (495)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998764332222222335678999999988888999999999999999998 888


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      ||...... +....+...  ...+......+.++..+|            ++.++|+...
T Consensus       419 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          419 PYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             SSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             CCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            88654322 111112111  122223334566777788            8888888764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.81  E-value=5e-21  Score=137.10  Aligned_cols=83  Identities=28%  Similarity=0.349  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-------ceeeecccccceecccccCC-------CCCCcccceee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-------RTFTLIRGTRGYMAPEWSKN-------TPISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~-------~~~~~~~dv~s   67 (137)
                      |+||||||+||+++.++.+||+|||+++.......       .......||..|+|||.+.+       ..++.++|+||
T Consensus       141 ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diws  220 (336)
T 3g2f_A          141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYA  220 (336)
T ss_dssp             EECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHH
T ss_pred             eeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHH
Confidence            79999999999999999999999999987643211       11223458999999999876       34567899999


Q ss_pred             HHHHHHHHHhcccchhh
Q 042492           68 YGVVLLEIEIVLINWAY   84 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~   84 (137)
                      ||++++||.++..||..
T Consensus       221 lG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          221 LGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             HHHHHHHHHTTBGGGST
T ss_pred             HHHHHHHHHhcCCcCCC
Confidence            99999999999877644

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.81  E-value=4.4e-21  Score=135.14  Aligned_cols=84  Identities=23%  Similarity=0.293  Sum_probs=70.5

Q ss_pred             eEecCCCCCCEEeCCCCc-----EEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWT-----AKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~-----~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      |+||||||+||+++.++.     ++++|||+++........      ......||..|+|||.+.+..++.++|+||+|+
T Consensus       127 ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  206 (298)
T 1csn_A          127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH  206 (298)
T ss_dssp             EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence            799999999999987665     999999999876433221      123445899999999999888999999999999


Q ss_pred             HHHHHHhcccchhhh
Q 042492           71 VLLEIEIVLINWAYK   85 (137)
Q Consensus        71 ~l~el~~~~~~~~~~   85 (137)
                      ++++|.+|..||...
T Consensus       207 il~el~~g~~pf~~~  221 (298)
T 1csn_A          207 VFMYFLRGSLPWQGL  221 (298)
T ss_dssp             HHHHHHHSSCTTSSC
T ss_pred             HHHHHHcCCCCcchh
Confidence            999999999999763

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.81  E-value=3.6e-21  Score=135.60  Aligned_cols=125  Identities=27%  Similarity=0.418  Sum_probs=79.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-cceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.++|+|||+++...... ........|+..|+|||.+.   +..++.++|+||+|++++++.+
T Consensus       141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  220 (289)
T 3og7_A          141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT  220 (289)
T ss_dssp             CCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH
Confidence            7899999999999999999999999987543211 11223345899999999886   5567889999999999999999


Q ss_pred             cccchhhhhcchhhhhhcc----CC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           78 VLINWAYKCFIDREFNKLV----HD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      |..||......+.....+.    .+  ..........+.++..+|            ++.++|+...
T Consensus       221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          221 GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             SSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            9999975433222111111    11  112223335566677777            7778777653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.81  E-value=2.6e-21  Score=138.54  Aligned_cols=85  Identities=24%  Similarity=0.387  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|+||+|++++++.+ |.
T Consensus       136 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~  215 (325)
T 3kex_A          136 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA  215 (325)
T ss_dssp             CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCC
Confidence            799999999999999999999999999876433222 2233457789999999988889999999999999999999 99


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       216 ~p~~~~~  222 (325)
T 3kex_A          216 EPYAGLR  222 (325)
T ss_dssp             CTTTTSC
T ss_pred             CCccccC
Confidence            9997543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.81  E-value=6.8e-21  Score=139.31  Aligned_cols=85  Identities=28%  Similarity=0.372  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC--------------------cceeeecccccceecccccCC-CCCC
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ--------------------TRTFTLIRGTRGYMAPEWSKN-TPIS   60 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~--------------------~~~~~~~~~~~~~~ape~~~~-~~~~   60 (137)
                      |+||||||+||+++.++.+||+|||+++......                    ........||+.|+|||++.+ ..++
T Consensus       130 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  209 (388)
T 3oz6_A          130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYT  209 (388)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCC
T ss_pred             EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCC
Confidence            7999999999999999999999999998653211                    111233568999999999876 5688


Q ss_pred             cccceeeHHHHHHHHHhcccchhhhh
Q 042492           61 VKANVFNYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        61 ~~~dv~s~G~~l~el~~~~~~~~~~~   86 (137)
                      .++|+||+||+++||.+|..||....
T Consensus       210 ~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          210 KGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999996543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.81  E-value=7.5e-21  Score=135.27  Aligned_cols=85  Identities=27%  Similarity=0.499  Sum_probs=64.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++........  ......|+..|+|||.+.+..++.++|+||+|+++++|.+|.
T Consensus       137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~  216 (311)
T 3ork_A          137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE  216 (311)
T ss_dssp             CCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999865332221  122345899999999998888999999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       217 ~pf~~~~  223 (311)
T 3ork_A          217 PPFTGDS  223 (311)
T ss_dssp             CSCCCSS
T ss_pred             CCCCCCC
Confidence            9996543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.81  E-value=1e-20  Score=135.53  Aligned_cols=80  Identities=31%  Similarity=0.479  Sum_probs=70.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|+||+|++++||.+|..|
T Consensus       127 ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  202 (318)
T 1fot_A          127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP  202 (318)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCSSCEECSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccCCChheEEEcCCCCEEEeecCcceecCCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence            799999999999999999999999999875322    2234689999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       203 f~~~  206 (318)
T 1fot_A          203 FYDS  206 (318)
T ss_dssp             TCCS
T ss_pred             CCCC
Confidence            9654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.81  E-value=1.1e-20  Score=132.97  Aligned_cols=84  Identities=29%  Similarity=0.351  Sum_probs=71.0

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||++   +.++.+||+|||+++........      ......|+..|+|||.+.+..++.++|+||+|+++
T Consensus       126 ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  205 (296)
T 4hgt_A          126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  205 (296)
T ss_dssp             EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             eecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHH
Confidence            7999999999999   78889999999999876433221      12234589999999999988899999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      ++|.+|..||...
T Consensus       206 ~~l~~g~~pf~~~  218 (296)
T 4hgt_A          206 MYFNLGSLPWQGL  218 (296)
T ss_dssp             HHHHHSSCTTSSC
T ss_pred             HHHhcCCCCCccc
Confidence            9999999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.81  E-value=1e-20  Score=134.54  Aligned_cols=120  Identities=25%  Similarity=0.325  Sum_probs=79.8

Q ss_pred             eEecCCCCCCEEeCCCCc-EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWT-AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++. +|++|||+++.....    .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..
T Consensus       126 ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  201 (307)
T 2eva_A          126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK  201 (307)
T ss_dssp             CCCCCCSGGGEEEETTTTEEEECCCCC----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCC
T ss_pred             eecCCCChhHEEEeCCCCEEEEcccccccccccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            799999999999987776 799999998754321    122348999999999998889999999999999999999999


Q ss_pred             chhhhhcchhhh-hhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDREF-NKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||.......... ......  ..........+.++..+|            ++.++|+..
T Consensus       202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  261 (307)
T 2eva_A          202 PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL  261 (307)
T ss_dssp             TTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            997433221111 111111  111122233456666777            777777754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.80  E-value=1e-20  Score=144.10  Aligned_cols=83  Identities=35%  Similarity=0.466  Sum_probs=72.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       310 IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~P  388 (543)
T 3c4z_A          310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP  388 (543)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCC
Confidence            799999999999999999999999999876443322 2334699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       389 F~~~  392 (543)
T 3c4z_A          389 FRAR  392 (543)
T ss_dssp             SCCT
T ss_pred             CCCC
Confidence            9754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.80  E-value=4.4e-21  Score=134.55  Aligned_cols=85  Identities=22%  Similarity=0.300  Sum_probs=60.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++..............++..|+|||.+.+..++.++|+||+|++++++.+ +..
T Consensus       137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~  216 (281)
T 1mp8_A          137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  216 (281)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999998764333222233346778999999988888999999999999999986 888


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       217 pf~~~~  222 (281)
T 1mp8_A          217 PFQGVK  222 (281)
T ss_dssp             TTTTCC
T ss_pred             CCCcCC
Confidence            987543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=5.6e-21  Score=137.37  Aligned_cols=124  Identities=23%  Similarity=0.265  Sum_probs=86.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.++|+|||+++........ ......++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  272 (344)
T 1rjb_A          193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV  272 (344)
T ss_dssp             EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred             cccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCC
Confidence            799999999999999999999999999765332221 1223346778999999988888999999999999999997 99


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||............+...  ...+......+.++..+|            ++.+.|+..
T Consensus       273 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  332 (344)
T 1rjb_A          273 NPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ  332 (344)
T ss_dssp             CSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            9997654322211111111  111222234455666667            777777754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.80  E-value=1.4e-20  Score=136.21  Aligned_cols=82  Identities=26%  Similarity=0.378  Sum_probs=70.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       131 ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  209 (345)
T 3a8x_A          131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP  209 (345)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ceecCCCHHHEEECCCCCEEEEeccccccccCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999985422222 22345699999999999988899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       210 f~~  212 (345)
T 3a8x_A          210 FDI  212 (345)
T ss_dssp             TTT
T ss_pred             cCC
Confidence            964

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.80  E-value=1.4e-20  Score=136.53  Aligned_cols=80  Identities=25%  Similarity=0.344  Sum_probs=70.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|+||+|++++||.+|..|
T Consensus       162 ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  237 (350)
T 1rdq_E          162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP  237 (350)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccCccceEEECCCCCEEEcccccceeccCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCC
Confidence            799999999999999999999999999876332    1234589999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       238 f~~~  241 (350)
T 1rdq_E          238 FFAD  241 (350)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9754

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.80  E-value=2e-20  Score=138.20  Aligned_cols=80  Identities=16%  Similarity=0.215  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc----------CCCCCCcccceeeHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS----------KNTPISVKANVFNYGVV   71 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~----------~~~~~~~~~dv~s~G~~   71 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....| ..|+|||.+          ....++.++|+|||||+
T Consensus       232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi  306 (413)
T 3dzo_A          232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA  306 (413)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred             cccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence            799999999999999999999999998864321    233457 999999998          55567889999999999


Q ss_pred             HHHHHhcccchhhhh
Q 042492           72 LLEIEIVLINWAYKC   86 (137)
Q Consensus        72 l~el~~~~~~~~~~~   86 (137)
                      +|||.+|..||....
T Consensus       307 l~elltg~~Pf~~~~  321 (413)
T 3dzo_A          307 IYWIWCADLPNTDDA  321 (413)
T ss_dssp             HHHHHHSSCCCCTTG
T ss_pred             HHHHHHCCCCCCCcc
Confidence            999999999997543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.80  E-value=1.2e-20  Score=134.56  Aligned_cols=123  Identities=23%  Similarity=0.304  Sum_probs=80.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++....... .......++..|+|||.+.+..++.++|+||+|+++++|++ |.
T Consensus       158 ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  237 (323)
T 3qup_A          158 FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ  237 (323)
T ss_dssp             CCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCC
Confidence            79999999999999999999999999986533222 11223346778999999988889999999999999999999 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||...... +....+...  ..........+.++..+|            ++.+.|+.+
T Consensus       238 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  296 (323)
T 3qup_A          238 TPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI  296 (323)
T ss_dssp             CTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            998754322 222222222  122222334566677777            666666653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.80  E-value=1.2e-20  Score=141.36  Aligned_cols=82  Identities=32%  Similarity=0.361  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......||+.|+|||++.+..++.++|+||+||+++||.+|..|
T Consensus       185 iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~p  262 (464)
T 3ttj_A          185 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL  262 (464)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998653321  23345689999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       263 F~g~  266 (464)
T 3ttj_A          263 FPGR  266 (464)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.80  E-value=4.9e-21  Score=138.04  Aligned_cols=83  Identities=34%  Similarity=0.479  Sum_probs=63.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCC-----------CCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKN-----------TPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~dv~s~G   69 (137)
                      |+||||||+||+++ ++.+||+|||+++........ ......||+.|+|||++.+           ..++.++|+||+|
T Consensus       129 iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG  207 (343)
T 3dbq_A          129 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  207 (343)
T ss_dssp             CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHH
T ss_pred             eecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHH
Confidence            79999999999997 578999999999866433221 2234468999999998854           5678899999999


Q ss_pred             HHHHHHHhcccchhhh
Q 042492           70 VVLLEIEIVLINWAYK   85 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~   85 (137)
                      +++++|.+|..||...
T Consensus       208 ~il~ell~g~~pf~~~  223 (343)
T 3dbq_A          208 CILYYMTYGKTPFQQI  223 (343)
T ss_dssp             HHHHHHHHSSCTTTTC
T ss_pred             HHHHHHHhCCCcchhh
Confidence            9999999999999753

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.80  E-value=1.4e-20  Score=135.09  Aligned_cols=83  Identities=28%  Similarity=0.388  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  220 (327)
T 3a62_A          142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP  220 (327)
T ss_dssp             CCCCCCCTTTEEECTTSCEEECCCSCC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEcccCCHHHeEECCCCcEEEEeCCcccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCC
Confidence            79999999999999999999999999875432221 12334589999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       221 f~~~  224 (327)
T 3a62_A          221 FTGE  224 (327)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.80  E-value=9.3e-21  Score=135.93  Aligned_cols=85  Identities=26%  Similarity=0.308  Sum_probs=64.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++........ ......++..|+|||.+.+..++.++|+||+|+++++|++ |.
T Consensus       138 ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~  217 (327)
T 3lzb_A          138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS  217 (327)
T ss_dssp             CCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCC
Confidence            799999999999999999999999999865332221 1223346778999999988889999999999999999998 99


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       218 ~p~~~~~  224 (327)
T 3lzb_A          218 KPYDGIP  224 (327)
T ss_dssp             CTTTTCC
T ss_pred             CCCCCCC
Confidence            9997543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.80  E-value=7.1e-21  Score=139.67  Aligned_cols=95  Identities=28%  Similarity=0.413  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCC-----------CCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKN-----------TPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~dv~s~G   69 (137)
                      |+||||||+||+++ ++.+||+|||+++........ ......||+.|+|||++.+           ..++.++||||+|
T Consensus       176 ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlG  254 (390)
T 2zmd_A          176 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  254 (390)
T ss_dssp             CCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHH
T ss_pred             eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHH
Confidence            79999999999996 578999999999866433221 1234469999999998864           3578899999999


Q ss_pred             HHHHHHHhcccchhhhhcchhhhhhccC
Q 042492           70 VVLLEIEIVLINWAYKCFIDREFNKLVH   97 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~~~~~~~~~~~~   97 (137)
                      ++++||.+|..||.........+..+++
T Consensus       255 vil~ell~G~~Pf~~~~~~~~~~~~~~~  282 (390)
T 2zmd_A          255 CILYYMTYGKTPFQQIINQISKLHAIID  282 (390)
T ss_dssp             HHHHHHHHSSCTTTTCCCHHHHHHHHHC
T ss_pred             HHHHHHHHCCCcchhhhHHHHHHHHHhC
Confidence            9999999999999754322233344443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.79  E-value=5e-20  Score=135.18  Aligned_cols=82  Identities=34%  Similarity=0.513  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC---CCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN---TPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||+.|+|||++.+   ..++.++|+||+|+++++|.+|
T Consensus       136 ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG  213 (384)
T 4fr4_A          136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG  213 (384)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC--BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHS
T ss_pred             ceeccCcHHHeEECCCCCEEEeccceeeeccCCCc--eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhC
Confidence            79999999999999999999999999987643322  234569999999999864   3478899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       214 ~~Pf~~~  220 (384)
T 4fr4_A          214 RRPYHIR  220 (384)
T ss_dssp             SCSSCCC
T ss_pred             CCCCCCC
Confidence            9999643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.79  E-value=5.6e-21  Score=145.30  Aligned_cols=125  Identities=20%  Similarity=0.320  Sum_probs=89.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+|||||++||+++.++.+||+|||+++..............++..|+|||.+.+..++.++||||||+++|||.+ |..
T Consensus       384 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~  463 (535)
T 2h8h_A          384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  463 (535)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCC
T ss_pred             eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999997653211111122335678999999988889999999999999999998 888


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ||..... .+....+...  ..........+.++..+|            ++.++|+....
T Consensus       464 P~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          464 PYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             SSTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            9864332 1222222222  122223344566777788            88899988644

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.79  E-value=1.1e-20  Score=142.28  Aligned_cols=84  Identities=29%  Similarity=0.324  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||++   +.++.+||+|||+++........      ......|+..|++||.+.+..++.++||||||+++
T Consensus       124 IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil  203 (483)
T 3sv0_A          124 FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVL  203 (483)
T ss_dssp             EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHH
Confidence            7999999999999   57889999999999876433221      11245689999999999998899999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      |||++|..||...
T Consensus       204 ~elltG~~Pf~~~  216 (483)
T 3sv0_A          204 MYFLRGSLPWQGL  216 (483)
T ss_dssp             HHHHHSSCTTSSC
T ss_pred             HHHHhCCCCCccc
Confidence            9999999999753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.79  E-value=1.2e-20  Score=132.79  Aligned_cols=84  Identities=29%  Similarity=0.350  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeC---CCCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~---~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||+++   .++.+||+|||+++........      ......|+..|+|||.+.+..++.++|+||+|+++
T Consensus       126 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  205 (296)
T 3uzp_A          126 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  205 (296)
T ss_dssp             EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHH
Confidence            79999999999994   7889999999999876433221      12334589999999999988899999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      ++|.+|..||...
T Consensus       206 ~~l~~g~~pf~~~  218 (296)
T 3uzp_A          206 MYFNLGSLPWQGL  218 (296)
T ss_dssp             HHHHHSSCTTSSC
T ss_pred             HHHHhCCCCCCCc
Confidence            9999999999753

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.79  E-value=3.6e-20  Score=138.18  Aligned_cols=119  Identities=25%  Similarity=0.323  Sum_probs=85.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++......    ....++..|+|||.+.+..++.++|+||||+++|||.+ |..
T Consensus       310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~  385 (450)
T 1k9a_A          310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  385 (450)
T ss_dssp             EECSCCCGGGEEECTTSCEEECCCTTCEECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998643211    12246788999999988889999999999999999997 999


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||......+ ....+...  ...+......+.++..+|            ++.+.|+.+
T Consensus       386 P~~~~~~~~-~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          386 PYPRIPLKD-VVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             SSTTSCTTT-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCHHH-HHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            987543221 22222222  122223345566777788            777777654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.79  E-value=7.2e-21  Score=138.93  Aligned_cols=123  Identities=20%  Similarity=0.206  Sum_probs=84.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee-eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++.......... ....++..|+|||.+.+..++.++|+||||+++||+.+ |.
T Consensus       234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~  313 (377)
T 3cbl_A          234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA  313 (377)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999986432211111 11124667999999988888999999999999999997 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||......+ ....+...  ...+......+.++..+|            ++.+.|+.+
T Consensus       314 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          314 SPYPNLSNQQ-TREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             CSSTTSCHHH-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            8886543211 11111111  112222334566677777            777777653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.79  E-value=1.2e-20  Score=135.75  Aligned_cols=83  Identities=25%  Similarity=0.423  Sum_probs=70.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCC-cccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS-VKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~-~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++.......  .....||+.|+|||.+.+..+. .++|+||+|+++++|.+|..
T Consensus       135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  212 (328)
T 3fe3_A          135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL  212 (328)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence            79999999999999999999999999976543322  2345699999999999877764 78999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       213 pf~~~~  218 (328)
T 3fe3_A          213 PFDGQN  218 (328)
T ss_dssp             SSCCSS
T ss_pred             CCCCCC
Confidence            997543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.79  E-value=1.5e-20  Score=131.51  Aligned_cols=84  Identities=29%  Similarity=0.443  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+ |..
T Consensus       130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  209 (279)
T 1qpc_A          130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (279)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998764333222223346778999999987788899999999999999998 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       210 p~~~~  214 (279)
T 1qpc_A          210 PYPGM  214 (279)
T ss_dssp             SSTTC
T ss_pred             CCccc
Confidence            98643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.79  E-value=4e-20  Score=131.67  Aligned_cols=79  Identities=30%  Similarity=0.450  Sum_probs=64.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......||+.|+|||++.+ .++.++|+||+|++++||.++..+
T Consensus       178 ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~  254 (311)
T 3p1a_A          178 LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL  254 (311)
T ss_dssp             EECCCCSGGGEEECGGGCEEECCCTTCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCC
T ss_pred             EecCCCCHHHEEECCCCCEEEccceeeeecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999988753322  2233458999999998875 688999999999999999998654


Q ss_pred             hh
Q 042492           82 WA   83 (137)
Q Consensus        82 ~~   83 (137)
                      +.
T Consensus       255 ~~  256 (311)
T 3p1a_A          255 PH  256 (311)
T ss_dssp             CS
T ss_pred             CC
Confidence            43

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.79  E-value=3.1e-20  Score=135.46  Aligned_cols=80  Identities=15%  Similarity=0.215  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-----------CCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-----------PISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-----------~~~~~~dv~s~G~   70 (137)
                      |+||||||+||+++.++.+||+|||+++....    ......| ..|+|||.+.+.           .++.++|+||||+
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            79999999999999999999999999986422    2234457 999999999877           7899999999999


Q ss_pred             HHHHHHhcccchhhhh
Q 042492           71 VLLEIEIVLINWAYKC   86 (137)
Q Consensus        71 ~l~el~~~~~~~~~~~   86 (137)
                      +++||.+|..||....
T Consensus       302 il~elltg~~Pf~~~~  317 (377)
T 3byv_A          302 VIYWIWCADLPITKDA  317 (377)
T ss_dssp             HHHHHHHSSCCC----
T ss_pred             HHHHHHHCCCCCcccc
Confidence            9999999999997543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.79  E-value=1.2e-20  Score=132.33  Aligned_cols=84  Identities=23%  Similarity=0.316  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+ |..
T Consensus       134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~  213 (281)
T 3cc6_A          134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQ  213 (281)
T ss_dssp             CCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987654332222233346778999999988888999999999999999997 999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       214 p~~~~  218 (281)
T 3cc6_A          214 PFFWL  218 (281)
T ss_dssp             TTTTS
T ss_pred             CcccC
Confidence            98643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.79  E-value=4.6e-20  Score=135.84  Aligned_cols=82  Identities=26%  Similarity=0.327  Sum_probs=65.5

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.+||+|||+++......  ......||..|+|||++.+..++.++|+||+|+++++|.+|
T Consensus       182 ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  259 (400)
T 1nxk_A          182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG  259 (400)
T ss_dssp             EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHS
T ss_pred             ccccCcCcceEEEecCCCCccEEEEecccccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhC
Confidence            799999999999987   7889999999998653222  22344689999999999888899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       260 ~~pf~~~  266 (400)
T 1nxk_A          260 YPPFYSN  266 (400)
T ss_dssp             SCSCCCC
T ss_pred             CCCCCCC
Confidence            9999654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.79  E-value=2.2e-20  Score=135.93  Aligned_cols=80  Identities=10%  Similarity=0.152  Sum_probs=69.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....++..|+|||.+.+  ..++.++|+||+|+++++|.+|.
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~  290 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF  290 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999865321    113346799999999987  67899999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       291 ~Pf~~~  296 (371)
T 3q60_A          291 LPFGLV  296 (371)
T ss_dssp             CSTTBC
T ss_pred             CCCCCc
Confidence            999765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.79  E-value=1.3e-19  Score=128.26  Aligned_cols=123  Identities=36%  Similarity=0.486  Sum_probs=90.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++........ ......|+..|+|||.+.+ .++.++|+||+|+++++|.+|..
T Consensus       154 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~  232 (307)
T 2nru_A          154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP  232 (307)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred             eecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence            799999999999999999999999999875432222 1223458999999998865 47889999999999999999999


Q ss_pred             chhhhhcchh-------------hhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDR-------------EFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~-------------~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||......+.             .+...++.  ..........+.++..+|            ++.++|+.+
T Consensus       233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          233 AVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             SBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            9875432110             01122222  234566677888888888            777777754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.79  E-value=9.2e-21  Score=135.97  Aligned_cols=124  Identities=21%  Similarity=0.263  Sum_probs=86.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       195 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  274 (343)
T 1luf_A          195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  274 (343)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999876532211 11223447888999999988889999999999999999998 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      .||..... .+....+.+.  ...+......+.++..+|            ++.++|+.+.
T Consensus       275 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          275 QPYYGMAH-EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             CTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CcCCCCCh-HHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            89865432 2222222222  111222233455666677            8888888764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=6.1e-20  Score=129.28  Aligned_cols=83  Identities=25%  Similarity=0.366  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.++++|||+++.......   .......++..|++||.+.+..++.++|+||+|+++++|.++
T Consensus       145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  224 (298)
T 3pls_A          145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTR  224 (298)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHT
T ss_pred             cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhC
Confidence            78999999999999999999999999975432211   112233477899999999988899999999999999999996


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       225 ~~~~~~  230 (298)
T 3pls_A          225 GAPPYR  230 (298)
T ss_dssp             SCCTTT
T ss_pred             CCCCCc
Confidence            655443

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.79  E-value=1.1e-20  Score=136.58  Aligned_cols=85  Identities=15%  Similarity=0.275  Sum_probs=70.9

Q ss_pred             eEecCCCCCCEEeCCCC--cEEEEecCCceecCCCCc------ceeeecccccceecccccCCCCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW--TAKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~--~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~   73 (137)
                      |+||||||+||+++.++  .++|+|||+++.......      .......|+..|+|||.+.+..++.++|+||+|++++
T Consensus       180 ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  259 (352)
T 2jii_A          180 YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML  259 (352)
T ss_dssp             CBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             ccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence            79999999999999887  899999999976532211      1112345899999999999888999999999999999


Q ss_pred             HHHhcccchhhhh
Q 042492           74 EIEIVLINWAYKC   86 (137)
Q Consensus        74 el~~~~~~~~~~~   86 (137)
                      +|.+|..||....
T Consensus       260 el~~g~~pf~~~~  272 (352)
T 2jii_A          260 KWLYGFLPWTNCL  272 (352)
T ss_dssp             HHHHSCCTTGGGT
T ss_pred             HHHhCCCCcccCC
Confidence            9999999998654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.79  E-value=3.4e-20  Score=133.87  Aligned_cols=82  Identities=28%  Similarity=0.518  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++.......  .....||+.|+|||.+.+..+ +.++|+||+|+++++|.+|..
T Consensus       129 ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  206 (336)
T 3h4j_B          129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRL  206 (336)
T ss_dssp             CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eEecCCchhhEEEcCCCCEEEEEeccceeccCCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCC
Confidence            78999999999999999999999999986533222  233468999999999987765 678999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       207 Pf~~~  211 (336)
T 3h4j_B          207 PFDDE  211 (336)
T ss_dssp             SSBCS
T ss_pred             CCCCc
Confidence            99754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.79  E-value=5.9e-20  Score=131.46  Aligned_cols=83  Identities=25%  Similarity=0.376  Sum_probs=71.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++........ .....||..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       162 ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p  240 (321)
T 2c30_A          162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP  240 (321)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             eecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876433222 2344689999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       241 f~~~  244 (321)
T 2c30_A          241 YFSD  244 (321)
T ss_dssp             TTTS
T ss_pred             CCCC
Confidence            9654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.79  E-value=1.4e-20  Score=133.47  Aligned_cols=85  Identities=29%  Similarity=0.333  Sum_probs=70.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++......... .....++..|+|||.+.+..++.++|+||+|+++++|.+ +.
T Consensus       166 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  245 (313)
T 1t46_A          166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (313)
T ss_dssp             CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence            7899999999999999999999999998664433221 223346778999999988888999999999999999998 89


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       246 ~p~~~~~  252 (313)
T 1t46_A          246 SPYPGMP  252 (313)
T ss_dssp             CSSTTCC
T ss_pred             CCCCccc
Confidence            9987544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.79  E-value=1.3e-20  Score=145.36  Aligned_cols=123  Identities=21%  Similarity=0.231  Sum_probs=86.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.........  .....++..|+|||++.+..++.++||||||+++|||++ |
T Consensus       457 iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G  536 (613)
T 2ozo_A          457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG  536 (613)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            7999999999999999999999999998653222111  112235678999999988889999999999999999997 9


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||..... .+....+...  ...+.....++.++...|            ++.++|+..
T Consensus       537 ~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          537 QKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             CCTTTTCCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            999975432 2222222222  223333445677788888            777777753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.78  E-value=4.1e-20  Score=132.56  Aligned_cols=124  Identities=27%  Similarity=0.323  Sum_probs=87.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCC------CCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP------ISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~------~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||+++.++.+||+|||+++........   ......|+..|+|||.+.+..      ++.++|+||+|+++
T Consensus       168 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il  247 (342)
T 1b6c_B          168 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF  247 (342)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHH
T ss_pred             eeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHH
Confidence            799999999999999999999999999876433321   122345899999999987652      23679999999999


Q ss_pred             HHHHhc----------ccchhhhhcch---hhhhh-ccCC---c----c-ccHHHHHHHHHHHHHh------------HH
Q 042492           73 LEIEIV----------LINWAYKCFID---REFNK-LVHD---E----E-VNKKTLENMIKVRLWC------------SV  118 (137)
Q Consensus        73 ~el~~~----------~~~~~~~~~~~---~~~~~-~~~~---~----~-~~~~~~~~~~~~~l~C------------~v  118 (137)
                      +||.+|          ..||......+   ..+.. +...   .    . ........+.++..+|            ++
T Consensus       248 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i  327 (342)
T 1b6c_B          248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI  327 (342)
T ss_dssp             HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             HHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence            999998          67876543211   11111 1111   1    1 1235667788888888            77


Q ss_pred             HHHHhcC
Q 042492          119 VMMLEGI  125 (137)
Q Consensus       119 ~~~L~~~  125 (137)
                      .+.|+.+
T Consensus       328 ~~~L~~i  334 (342)
T 1b6c_B          328 KKTLSQL  334 (342)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7777754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=3.7e-20  Score=131.25  Aligned_cols=85  Identities=27%  Similarity=0.305  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.++|+|||+++......... .....++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  250 (314)
T 2ivs_A          171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG  250 (314)
T ss_dssp             EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998764332221 122346778999999988888999999999999999998 88


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       251 ~p~~~~~  257 (314)
T 2ivs_A          251 NPYPGIP  257 (314)
T ss_dssp             CSSTTCC
T ss_pred             CCCCCCC
Confidence            9986543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.78  E-value=2.6e-20  Score=134.79  Aligned_cols=84  Identities=26%  Similarity=0.406  Sum_probs=62.6

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.+||+|||+++......  ......||+.|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       169 ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  246 (349)
T 2w4o_A          169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG  246 (349)
T ss_dssp             CCCCCCCGGGEEESSSSTTCCEEECCCC------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eEecCCCcccEEEecCCCCCCEEEccCccccccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhC
Confidence            799999999999975   8899999999988653221  12334589999999999988899999999999999999999


Q ss_pred             ccchhhhhc
Q 042492           79 LINWAYKCF   87 (137)
Q Consensus        79 ~~~~~~~~~   87 (137)
                      ..||.....
T Consensus       247 ~~pf~~~~~  255 (349)
T 2w4o_A          247 FEPFYDERG  255 (349)
T ss_dssp             SCTTCCTTC
T ss_pred             CCCCCCCcc
Confidence            999965443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.78  E-value=2.2e-20  Score=133.82  Aligned_cols=86  Identities=36%  Similarity=0.524  Sum_probs=70.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++....... .......||..|+|||.+.+..+ +.++|+||+|+++++|.+|.
T Consensus       126 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  205 (323)
T 3tki_A          126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  205 (323)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999986532221 11234568999999999977665 67899999999999999999


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .||.....
T Consensus       206 ~pf~~~~~  213 (323)
T 3tki_A          206 LPWDQPSD  213 (323)
T ss_dssp             CSCSSSCT
T ss_pred             CCCCCCch
Confidence            99975544

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.78  E-value=6e-20  Score=136.97  Aligned_cols=83  Identities=27%  Similarity=0.476  Sum_probs=70.3

Q ss_pred             eEecCCCCCCEEeC---CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++   .++.+||+|||+++....... ......||+.|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       131 ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G  209 (444)
T 3soa_A          131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG  209 (444)
T ss_dssp             CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhC
Confidence            79999999999998   467899999999976643322 22345699999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       210 ~~Pf~~~  216 (444)
T 3soa_A          210 YPPFWDE  216 (444)
T ss_dssp             SCSCCCS
T ss_pred             CCCCCCc
Confidence            9999644

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.78  E-value=1.3e-20  Score=133.70  Aligned_cols=85  Identities=31%  Similarity=0.357  Sum_probs=70.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++........ ......++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~  248 (316)
T 2xir_A          169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA  248 (316)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865433221 2223346788999999988888999999999999999997 89


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       249 ~p~~~~~  255 (316)
T 2xir_A          249 SPYPGVK  255 (316)
T ss_dssp             CSSTTCC
T ss_pred             CCCcccc
Confidence            9997544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.78  E-value=1.5e-19  Score=130.15  Aligned_cols=81  Identities=33%  Similarity=0.447  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||..|+|||.+.+..+ +.++|+||+|+++++|.+|..
T Consensus       151 ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  228 (335)
T 3dls_A          151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN  228 (335)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             eEEeccCHHHEEEcCCCcEEEeecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCC
Confidence            79999999999999999999999999987643322  233458999999999987776 778999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       229 pf~~  232 (335)
T 3dls_A          229 PFCE  232 (335)
T ss_dssp             SCSS
T ss_pred             chhh
Confidence            9964

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.78  E-value=8.8e-21  Score=132.19  Aligned_cols=85  Identities=27%  Similarity=0.413  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+ +..
T Consensus       127 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~  206 (269)
T 4hcu_A          127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI  206 (269)
T ss_dssp             CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             eecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCC
Confidence            7899999999999999999999999987653322222223346678999999988889999999999999999998 889


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       207 p~~~~~  212 (269)
T 4hcu_A          207 PYENRS  212 (269)
T ss_dssp             TTTTCC
T ss_pred             CCCCCC
Confidence            987543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.78  E-value=3.6e-20  Score=131.43  Aligned_cols=82  Identities=28%  Similarity=0.367  Sum_probs=70.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       141 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p  218 (308)
T 3g33_A          141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL  218 (308)
T ss_dssp             CCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred             cccCCCCHHHEEEcCCCCEEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999976532222  2344689999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       219 f~~~  222 (308)
T 3g33_A          219 FCGN  222 (308)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9644

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=2.4e-20  Score=136.22  Aligned_cols=123  Identities=24%  Similarity=0.313  Sum_probs=76.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-   77 (137)
                      |+||||||+||+++.++.+||+|||+++........   ......++..|+|||.+.+..++.++|+||||+++|||.+ 
T Consensus       213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~  292 (373)
T 3c1x_A          213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR  292 (373)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             EecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999865322211   1122346778999999988889999999999999999998 


Q ss_pred             cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           78 VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      +..||......+ ....+...  ...+......+.++..+|            ++.+.|+..
T Consensus       293 ~~~p~~~~~~~~-~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          293 GAPPYPDVNTFD-ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             SCCSCTTSCSSC-HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCCCCCCCHHH-HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            667776443222 11122221  111112233456667777            777777653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.78  E-value=5.5e-20  Score=131.31  Aligned_cols=86  Identities=27%  Similarity=0.316  Sum_probs=55.8

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-----------eeecccccceeccccc---CCCCCCccccee
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-----------FTLIRGTRGYMAPEWS---KNTPISVKANVF   66 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~ape~~---~~~~~~~~~dv~   66 (137)
                      +|+||||||+||+++.++.+||+|||+++.........           .....++..|+|||.+   .+..++.++|+|
T Consensus       158 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~  237 (337)
T 3ll6_A          158 PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW  237 (337)
T ss_dssp             CCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHH
T ss_pred             CEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHH
Confidence            48999999999999999999999999998654322110           1133488899999988   566678899999


Q ss_pred             eHHHHHHHHHhcccchhhhh
Q 042492           67 NYGVVLLEIEIVLINWAYKC   86 (137)
Q Consensus        67 s~G~~l~el~~~~~~~~~~~   86 (137)
                      |+|+++++|.++..||....
T Consensus       238 slG~il~el~~g~~p~~~~~  257 (337)
T 3ll6_A          238 ALGCILYLLCFRQHPFEDGA  257 (337)
T ss_dssp             HHHHHHHHHHHSSCCC----
T ss_pred             HHHHHHHHHHhCCCCCcchh
Confidence            99999999999999996543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.7e-20  Score=135.98  Aligned_cols=84  Identities=30%  Similarity=0.402  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++..............||..|+|||.+.+  ..++.++|+||||+++++|.+|.
T Consensus       180 ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~  259 (355)
T 1vzo_A          180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  259 (355)
T ss_dssp             CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             cccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCC
Confidence            7999999999999999999999999998754333333334568999999999875  34678899999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       260 ~pf~~~  265 (355)
T 1vzo_A          260 SPFTVD  265 (355)
T ss_dssp             CTTSCT
T ss_pred             CCCccC
Confidence            999643

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.78  E-value=8.8e-21  Score=135.38  Aligned_cols=85  Identities=27%  Similarity=0.285  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.++|+|||+++........  ......++..|+|||.+.+..++.++|+||+|+++++|.++.
T Consensus       155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~  234 (318)
T 3lxp_A          155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC  234 (318)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            799999999999999999999999999876443321  122334777899999998888889999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       235 ~p~~~~~  241 (318)
T 3lxp_A          235 DSSQSPP  241 (318)
T ss_dssp             CGGGSHH
T ss_pred             Ccccccc
Confidence            9987543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.78  E-value=6.1e-20  Score=129.36  Aligned_cols=82  Identities=21%  Similarity=0.288  Sum_probs=68.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++....... ......||..|+|||.+.+.. ++.++|+||+|+++++|.++..
T Consensus       122 ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~  200 (292)
T 3o0g_A          122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR  200 (292)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSC
T ss_pred             eecCCCCHHHEEEcCCCCEEEeecccceecCCccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCC
Confidence            79999999999999999999999999987643222 223345899999999987665 7899999999999999998887


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       201 p~~~  204 (292)
T 3o0g_A          201 PLFP  204 (292)
T ss_dssp             CSCC
T ss_pred             CCcC
Confidence            7643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.78  E-value=6.2e-20  Score=140.54  Aligned_cols=82  Identities=35%  Similarity=0.479  Sum_probs=72.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||+.|+|||++.+..++.++|+||+|++++||.+|..|
T Consensus       307 IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~P  384 (576)
T 2acx_A          307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP  384 (576)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeccCCchheEEEeCCCCeEEEecccceecccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999987643322  2334699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       385 F~~~  388 (576)
T 2acx_A          385 FQQR  388 (576)
T ss_dssp             SSCS
T ss_pred             Cccc
Confidence            9754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.78  E-value=2.5e-20  Score=136.03  Aligned_cols=123  Identities=20%  Similarity=0.302  Sum_probs=77.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.+||+|||+++..........  ....++..|+|||.+.+..++.++|+||||++++|+++ |
T Consensus       168 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g  247 (373)
T 2qol_A          168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG  247 (373)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred             eeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999986643222111  12224678999999988889999999999999999887 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||..... .+....+...  ..........+.++..+|            +++++|+..
T Consensus       248 ~~P~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          248 ERPYWEMSN-QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             -CTTTTCCH-HHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            899864332 1112222222  122223345567777888            777777654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.78  E-value=8.5e-20  Score=129.81  Aligned_cols=85  Identities=27%  Similarity=0.308  Sum_probs=61.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       155 i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  234 (309)
T 2h34_A          155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP  234 (309)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCS
T ss_pred             CCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCC
Confidence            78999999999999999999999999876543322222344588999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       235 f~~~~  239 (309)
T 2h34_A          235 YQGDQ  239 (309)
T ss_dssp             SCSCH
T ss_pred             CCCch
Confidence            97543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.78  E-value=2.5e-20  Score=130.80  Aligned_cols=85  Identities=28%  Similarity=0.404  Sum_probs=70.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+ +..
T Consensus       132 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~  211 (288)
T 3kfa_A          132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  211 (288)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999998664433333333346778999999988888999999999999999998 888


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       212 p~~~~~  217 (288)
T 3kfa_A          212 PYPGID  217 (288)
T ss_dssp             SSTTCC
T ss_pred             CCCCCC
Confidence            886543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.78  E-value=9.9e-21  Score=137.83  Aligned_cols=123  Identities=22%  Similarity=0.239  Sum_probs=83.8

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCceecCCCC-cceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++   .+||+|||+++...... ........+|..|+|||.+.+..++.++|+||||++++||.+
T Consensus       202 ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt  281 (367)
T 3l9p_A          202 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS  281 (367)
T ss_dssp             CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence            79999999999998544   59999999987542111 111223447889999999988889999999999999999997


Q ss_pred             -cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           78 -VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        78 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                       |..||...... +....+...  ..........+.++..+|            ++.+.|+..
T Consensus       282 ~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          282 LGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence             88998754322 222222222  111222233456667777            677666543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.78  E-value=1.3e-20  Score=145.91  Aligned_cols=122  Identities=25%  Similarity=0.265  Sum_probs=83.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .......++..|+|||++.+..++.++||||||++++||.+ |
T Consensus       490 iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G  569 (635)
T 4fl3_A          490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  569 (635)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999986643222  11222346778999999988889999999999999999997 9


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ..||...... +....+...  ...+.....++.++..+|            ++.++|+.
T Consensus       570 ~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          570 QKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            9999754322 112222221  222223345566777777            67776664

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.78  E-value=1.1e-20  Score=135.21  Aligned_cols=86  Identities=33%  Similarity=0.395  Sum_probs=69.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.++|+|||+++........ ......++..|+|||.+.+..++.++|+||+|+++++|.+ |
T Consensus       184 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g  263 (333)
T 2i1m_A          184 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG  263 (333)
T ss_dssp             TEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred             CcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCC
Confidence            3799999999999999999999999999865332221 1223346778999999988888999999999999999998 8


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       264 ~~p~~~~~  271 (333)
T 2i1m_A          264 LNPYPGIL  271 (333)
T ss_dssp             CCSSTTCC
T ss_pred             CCCCcccc
Confidence            88987543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.78  E-value=6.6e-20  Score=130.22  Aligned_cols=123  Identities=20%  Similarity=0.334  Sum_probs=80.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++....... .......++..|+|||.+.+..++.++|+||+|+++++|.+ +.
T Consensus       168 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  247 (313)
T 3brb_A          168 FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM  247 (313)
T ss_dssp             CCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCC
Confidence            79999999999999999999999999876533221 11223346778999999988888999999999999999999 88


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||...... .....+...  ..........+.++..+|            ++.+.|+..
T Consensus       248 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          248 TPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             CSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            888654322 222222222  122222234456666677            666666653

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.78  E-value=1.1e-19  Score=127.76  Aligned_cols=83  Identities=29%  Similarity=0.402  Sum_probs=68.8

Q ss_pred             CeEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      +|+||||||+||+++ .++.++|+|||++.......   .....|+..|+|||.+.+ .++.++|+||+|+++++|.+|.
T Consensus       151 ~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~  226 (290)
T 1t4h_A          151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE  226 (290)
T ss_dssp             CCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCC
Confidence            489999999999997 78899999999987543222   233458999999998864 5889999999999999999999


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .||.....
T Consensus       227 ~pf~~~~~  234 (290)
T 1t4h_A          227 YPYSECQN  234 (290)
T ss_dssp             CTTTTCSS
T ss_pred             CCCCCcCc
Confidence            99975443

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.78  E-value=2e-20  Score=131.16  Aligned_cols=85  Identities=22%  Similarity=0.361  Sum_probs=69.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|++++++.+ +..
T Consensus       141 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~  220 (283)
T 3gen_A          141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM  220 (283)
T ss_dssp             CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987653322222222336678999999988888999999999999999997 999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       221 p~~~~~  226 (283)
T 3gen_A          221 PYERFT  226 (283)
T ss_dssp             TTTTSC
T ss_pred             CccccC
Confidence            987543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.78  E-value=1e-19  Score=129.64  Aligned_cols=84  Identities=25%  Similarity=0.328  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......+|..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       140 ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~  218 (311)
T 3niz_A          140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP  218 (311)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCCchHhEEECCCCCEEEccCcCceecCCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999987643222 2233458999999998875 457899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       219 pf~~~~  224 (311)
T 3niz_A          219 LFPGVT  224 (311)
T ss_dssp             SCCCSS
T ss_pred             CCCCCC
Confidence            996543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.77  E-value=4.4e-20  Score=130.24  Aligned_cols=83  Identities=27%  Similarity=0.414  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+|++|||+++.......   .......++..|+|||.+.+..++.++|+||+|++++++.++
T Consensus       149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~  228 (298)
T 3f66_A          149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR  228 (298)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999976533221   112233467789999999888889999999999999999994


Q ss_pred             -ccchhh
Q 042492           79 -LINWAY   84 (137)
Q Consensus        79 -~~~~~~   84 (137)
                       ..||..
T Consensus       229 ~~~~~~~  235 (298)
T 3f66_A          229 GAPPYPD  235 (298)
T ss_dssp             SCCSSTT
T ss_pred             CCCCCcc
Confidence             555543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.77  E-value=1.2e-19  Score=132.48  Aligned_cols=81  Identities=30%  Similarity=0.409  Sum_probs=69.4

Q ss_pred             CeEecCCCCCCEEeC--CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+||||||+||+++  .++.+||+|||+++.....    .....||..|+|||++.+..++.++|+||+||+++||.+|
T Consensus       179 ~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg  254 (382)
T 2vx3_A          179 SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG  254 (382)
T ss_dssp             CEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence            389999999999995  4778999999999876332    1234589999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       255 ~~pf~~~  261 (382)
T 2vx3_A          255 EPLFSGA  261 (382)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999743

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.77  E-value=5.2e-20  Score=131.12  Aligned_cols=123  Identities=18%  Similarity=0.257  Sum_probs=84.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++........ ......++..|+|||.+.+..++.++|+||+|+++++|.+ +.
T Consensus       159 i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  238 (322)
T 1p4o_A          159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE  238 (322)
T ss_dssp             CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred             CccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCC
Confidence            799999999999999999999999998755322211 1122336778999999988888999999999999999998 78


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||...... +....+...  ..........+.++..+|            ++.+.|+..
T Consensus       239 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          239 QPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             CTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             CccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            888654321 222222221  111122223345555666            788888764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.77  E-value=1.6e-19  Score=128.61  Aligned_cols=83  Identities=31%  Similarity=0.462  Sum_probs=68.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-----------ceeeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-----------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      |+||||||+||+++.++.+||+|||+++.......           .......||..|+|||.+.+..++.++|+||+|+
T Consensus       185 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  264 (332)
T 3qd2_B          185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGL  264 (332)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHH
T ss_pred             eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHH
Confidence            79999999999999999999999999987643321           1122345899999999998888999999999999


Q ss_pred             HHHHHHhcccchhh
Q 042492           71 VLLEIEIVLINWAY   84 (137)
Q Consensus        71 ~l~el~~~~~~~~~   84 (137)
                      ++++|.++..++..
T Consensus       265 il~el~~~~~~~~~  278 (332)
T 3qd2_B          265 ILFELLYSFSTQME  278 (332)
T ss_dssp             HHHHHHSCCCCHHH
T ss_pred             HHHHHHHcCCChhH
Confidence            99999998777653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.77  E-value=1.4e-19  Score=129.15  Aligned_cols=83  Identities=28%  Similarity=0.361  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......+|..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       129 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  207 (317)
T 2pmi_A          129 ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKP  207 (317)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999987643222 1233458999999999875 357899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       208 pf~~~  212 (317)
T 2pmi_A          208 LFPGT  212 (317)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99643

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.77  E-value=9.8e-20  Score=135.78  Aligned_cols=77  Identities=31%  Similarity=0.440  Sum_probs=60.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--------------------------ceeeecccccceeccccc-
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--------------------------RTFTLIRGTRGYMAPEWS-   54 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--------------------------~~~~~~~~~~~~~ape~~-   54 (137)
                      |+||||||+|||++.++.+||+|||+++.......                          .......||+.|+|||++ 
T Consensus       177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  256 (458)
T 3rp9_A          177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL  256 (458)
T ss_dssp             CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT
T ss_pred             cCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh
Confidence            79999999999999999999999999987532211                          112344689999999976 


Q ss_pred             CCCCCCcccceeeHHHHHHHHHhc
Q 042492           55 KNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus        55 ~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      ....++.++|+||+||+++||+++
T Consensus       257 ~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          257 LQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCcHhHHHHHHHHHHHHHHh
Confidence            456689999999999999999874

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.77  E-value=1.1e-19  Score=134.50  Aligned_cols=82  Identities=32%  Similarity=0.371  Sum_probs=68.2

Q ss_pred             eEecCCCCCCEEeCCC-CcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEF-WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.+ +.+||+|||+++.......  .....+|..|+|||++.+. .++.++|+||+||+++||.+|.
T Consensus       177 ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~  254 (420)
T 1j1b_A          177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  254 (420)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccccCCChhhEEEeCCCCeEEeccchhhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence            7999999999999954 5689999999987643322  2234689999999998654 6889999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       255 ~pf~~~  260 (420)
T 1j1b_A          255 PIFPGD  260 (420)
T ss_dssp             CSSCCS
T ss_pred             CCCCCC
Confidence            999754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.77  E-value=2.2e-20  Score=132.49  Aligned_cols=84  Identities=25%  Similarity=0.451  Sum_probs=60.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......++..|+|||.+.+..++.++|+||+|+++++|.++..|
T Consensus       157 i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p  235 (310)
T 2wqm_A          157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP  235 (310)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCC-------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             eeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999999999876533222 12234588999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       236 ~~~~~  240 (310)
T 2wqm_A          236 FYGDK  240 (310)
T ss_dssp             TC---
T ss_pred             Ccccc
Confidence            96543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.77  E-value=1.7e-19  Score=130.47  Aligned_cols=80  Identities=33%  Similarity=0.450  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCC-------------------------CCcEEEEecCCceecCCCCcceeeecccccceecccccCC
Q 042492            2 IIHCDIKPHNILMDE-------------------------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN   56 (137)
Q Consensus         2 iiHrdlk~~nill~~-------------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~   56 (137)
                      |+||||||+||+++.                         ++.+||+|||+++......    ....||..|+|||.+.+
T Consensus       158 ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILN  233 (360)
T ss_dssp             EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTT
T ss_pred             eeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcC
Confidence            799999999999975                         7889999999998653221    23458999999999998


Q ss_pred             CCCCcccceeeHHHHHHHHHhcccchhhh
Q 042492           57 TPISVKANVFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        57 ~~~~~~~dv~s~G~~l~el~~~~~~~~~~   85 (137)
                      ..++.++|+||+|+++++|.+|..||...
T Consensus       234 ~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          234 LGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence            88999999999999999999999999643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.77  E-value=3.8e-20  Score=130.49  Aligned_cols=84  Identities=31%  Similarity=0.408  Sum_probs=65.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+|++|||+++.......  .......++..|+|||.+.+..++.++|+||+|++++++.++.
T Consensus       135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~  214 (295)
T 3ugc_A          135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI  214 (295)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence            79999999999999999999999999986643222  1122334677799999998888999999999999999999988


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       215 ~~~~~~  220 (295)
T 3ugc_A          215 EKSKSP  220 (295)
T ss_dssp             CTTCSH
T ss_pred             cccCCC
Confidence            887543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.77  E-value=9.9e-20  Score=133.70  Aligned_cols=83  Identities=29%  Similarity=0.378  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++ .++.+||+|||+++.......  .....+|..|+|||.+.+. .++.++|+||+||+++||.+|.
T Consensus       162 ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            79999999999998 789999999999987643332  2334589999999988654 4889999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       240 ~pf~~~~  246 (394)
T 4e7w_A          240 PLFPGES  246 (394)
T ss_dssp             CSSCCSS
T ss_pred             CCCCCCC
Confidence            9997543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.77  E-value=1.3e-19  Score=134.55  Aligned_cols=81  Identities=27%  Similarity=0.348  Sum_probs=69.5

Q ss_pred             CeEecCCCCCCEEeCCCCc--EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWT--AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+||||||+||+++.++.  +||+|||+++.....    .....||+.|+|||++.+..++.++|+||+||+++||.+|
T Consensus       220 ~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG  295 (429)
T 3kvw_A          220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG  295 (429)
T ss_dssp             TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CeecCCCCHHHeEEccCCCcceEEeecccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhC
Confidence            3799999999999998877  999999999764322    2234689999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       296 ~~pf~~~  302 (429)
T 3kvw_A          296 YPLLPGE  302 (429)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9998654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.77  E-value=4.4e-20  Score=143.37  Aligned_cols=84  Identities=23%  Similarity=0.315  Sum_probs=66.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++..............++..|+|||.+.+..++.++|+||+|++++||.+ |..
T Consensus       512 ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~  591 (656)
T 2j0j_A          512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK  591 (656)
T ss_dssp             CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCC
Confidence            7999999999999999999999999998764333222233346778999999988889999999999999999986 888


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       592 Pf~~~  596 (656)
T 2j0j_A          592 PFQGV  596 (656)
T ss_dssp             TTTTC
T ss_pred             CCCCC
Confidence            98653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.77  E-value=2e-19  Score=127.10  Aligned_cols=83  Identities=31%  Similarity=0.406  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC---CCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP---ISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~---~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||..|+|||.+.+..   .+.++|+||+|+++++|.+|
T Consensus       158 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g  236 (298)
T 2zv2_A          158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFG  236 (298)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHS
T ss_pred             eeccCCCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHC
Confidence            79999999999999999999999999987643322 223446899999999987654   36779999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       237 ~~pf~~~  243 (298)
T 2zv2_A          237 QCPFMDE  243 (298)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCc
Confidence            9999654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.77  E-value=8e-20  Score=130.61  Aligned_cols=82  Identities=35%  Similarity=0.514  Sum_probs=52.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc----CCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS----KNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~----~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....|+..|+|||.+    .+..++.++|+||+|+++++|.+
T Consensus       147 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~  224 (327)
T 3aln_A          147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT  224 (327)
T ss_dssp             CCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------CCSHHHHHHHHHHHHHHHH
T ss_pred             EeECCCCHHHEEEcCCCCEEEccCCCceecccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHH
Confidence            79999999999999999999999999976533221  2223588999999998    45567889999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       225 g~~pf~~~  232 (327)
T 3aln_A          225 GRFPYPKW  232 (327)
T ss_dssp             SCCCSSCC
T ss_pred             CCCCCCCc
Confidence            99999753

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.77  E-value=1.8e-19  Score=125.99  Aligned_cols=84  Identities=25%  Similarity=0.433  Sum_probs=51.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||++......... .....|+..|+|||.+.+..++.++|+||+|+++++|.++..|
T Consensus       133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (278)
T 3cok_A          133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP  211 (278)
T ss_dssp             EECSSCCGGGEEECTTCCEEECCCTTCEECC-----------------------------CTHHHHHHHHHHHHHHSSCS
T ss_pred             eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876432221 2234588999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       212 ~~~~~  216 (278)
T 3cok_A          212 FDTDT  216 (278)
T ss_dssp             SCCCS
T ss_pred             CCChh
Confidence            97543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.77  E-value=2e-19  Score=130.94  Aligned_cols=82  Identities=29%  Similarity=0.442  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++    .+|++|||+++.......  .....||+.|+|||++.+..++.++|+||+|+++++|.+
T Consensus       136 ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~  213 (361)
T 2yab_A          136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  213 (361)
T ss_dssp             EECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh
Confidence            79999999999998766    799999999987643322  233459999999999988889999999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       214 g~~Pf~~~  221 (361)
T 2yab_A          214 GASPFLGD  221 (361)
T ss_dssp             SCCSSCCS
T ss_pred             CCCCCCCC
Confidence            99999653

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.77  E-value=1.8e-19  Score=130.39  Aligned_cols=83  Identities=30%  Similarity=0.391  Sum_probs=69.7

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.   +|++|||+++....... ......||+.|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       151 ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  229 (351)
T 3c0i_A          151 IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG  229 (351)
T ss_dssp             EECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHC
Confidence            799999999999976544   99999999987643322 22334689999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       230 ~~pf~~~  236 (351)
T 3c0i_A          230 CLPFYGT  236 (351)
T ss_dssp             SCSSCSS
T ss_pred             CCCCCCc
Confidence            9999653

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.76  E-value=1.2e-20  Score=132.53  Aligned_cols=121  Identities=17%  Similarity=0.248  Sum_probs=80.3

Q ss_pred             eEecCCCCCCEEeCCCCc--------EEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWT--------AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||+++.++.        ++++|||+++.....     ....++..|+|||.+.+ ..++.++|+||+|+++
T Consensus       134 ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  208 (289)
T 4fvq_A          134 LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTL  208 (289)
T ss_dssp             CCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred             eECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence            799999999999987776        999999998644221     22347889999999876 6688999999999999


Q ss_pred             HHHHhcccchhhhhcchhhhhhccCCccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           73 LEIEIVLINWAYKCFIDREFNKLVHDEEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        73 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ++|.++..++...................+.....++.++..+|            ++.+.|+....
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          209 WEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             HHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHcCCCCCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            99999655444332222222211122111111123355566667            77777776644

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.76  E-value=1.2e-19  Score=130.28  Aligned_cols=84  Identities=29%  Similarity=0.292  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce-eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT-FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++......... .....++..|+|||.+.+..++.++|+||+|+++++|.+ |.
T Consensus       178 ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  257 (334)
T 2pvf_A          178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG  257 (334)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCC
Confidence            7999999999999999999999999998764332211 222346778999999988788999999999999999998 88


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       258 ~p~~~~  263 (334)
T 2pvf_A          258 SPYPGI  263 (334)
T ss_dssp             CSSTTC
T ss_pred             CCcCcC
Confidence            998654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.76  E-value=1.1e-19  Score=131.64  Aligned_cols=80  Identities=30%  Similarity=0.390  Sum_probs=68.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.....     ....||+.|+|||.+.   ...++.++|+||||++++||.+|
T Consensus       175 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g  249 (348)
T 1u5q_A          175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  249 (348)
T ss_dssp             CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             eeeCCCCHHHEEECCCCCEEEeeccCceecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999765322     2345899999999874   45688899999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       250 ~~p~~~~~  257 (348)
T 1u5q_A          250 KPPLFNMN  257 (348)
T ss_dssp             SCTTTTSC
T ss_pred             CCCCCCCC
Confidence            99986543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.76  E-value=1e-19  Score=126.35  Aligned_cols=80  Identities=21%  Similarity=0.267  Sum_probs=65.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCc---ccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV---KANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~---~~dv~s~G~~l~el~~   77 (137)
                      +|+|||+||+||+++.++.+++.||+++.....      ....+|+.|+|||.+.+...+.   ++|+||+|++++++.+
T Consensus       133 ~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  206 (271)
T 3kmu_A          133 LIPRHALNSRSVMIDEDMTARISMADVKFSFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT  206 (271)
T ss_dssp             CCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred             ceecCCCccceEEEcCCcceeEEeccceeeecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHh
Confidence            489999999999999999999999887654221      1234789999999987655443   7999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       207 g~~p~~~~~  215 (271)
T 3kmu_A          207 REVPFADLS  215 (271)
T ss_dssp             CSCTTTTSC
T ss_pred             CCCCccccC
Confidence            999997543

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.76  E-value=1.9e-19  Score=133.56  Aligned_cols=82  Identities=29%  Similarity=0.459  Sum_probs=63.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---------------------ceeeecccccceeccccc-CCCCC
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---------------------RTFTLIRGTRGYMAPEWS-KNTPI   59 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---------------------~~~~~~~~~~~~~ape~~-~~~~~   59 (137)
                      |+||||||+||+++.++.+||+|||+++.......                     ...+...||..|+|||++ ....+
T Consensus       150 ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  229 (432)
T 3n9x_A          150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY  229 (432)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCC
T ss_pred             CCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCC
Confidence            79999999999999999999999999987643221                     112455689999999985 55668


Q ss_pred             CcccceeeHHHHHHHHHhcccchh
Q 042492           60 SVKANVFNYGVVLLEIEIVLINWA   83 (137)
Q Consensus        60 ~~~~dv~s~G~~l~el~~~~~~~~   83 (137)
                      +.++|+||+||+++||.+|..||.
T Consensus       230 ~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          230 TKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             CTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CcccccchHHHHHHHHHhcccccc
Confidence            999999999999999997655553

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.76  E-value=1.2e-19  Score=132.22  Aligned_cols=82  Identities=30%  Similarity=0.330  Sum_probs=62.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......||..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       148 ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  225 (371)
T 2xrw_A          148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL  225 (371)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECCCCC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             eecccCCHHHEEEcCCCCEEEEEeeccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            7999999999999999999999999998653221  12334589999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       226 f~~~  229 (371)
T 2xrw_A          226 FPGT  229 (371)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            9653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.76  E-value=8.4e-20  Score=130.58  Aligned_cols=85  Identities=31%  Similarity=0.348  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.++++|||+++.........  .....++..|+|||.+.+..++.++|+||+|+++++|.+|.
T Consensus       148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~  227 (327)
T 3lxl_A          148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYC  227 (327)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998764333221  12334777899999998888889999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       228 ~p~~~~~  234 (327)
T 3lxl_A          228 DKSCSPS  234 (327)
T ss_dssp             CGGGSHH
T ss_pred             CCCcccc
Confidence            9986543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.2e-19  Score=130.31  Aligned_cols=122  Identities=20%  Similarity=0.297  Sum_probs=79.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.........  .....++..|+|||.+.+..++.++|+||+|++++++++ |
T Consensus       168 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  247 (333)
T 1mqb_A          168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG  247 (333)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             eeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCC
Confidence            7899999999999999999999999998653322111  112235678999999988888999999999999999988 8


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ..||..... .+....+.+.  ..........+.++..+|            ++.++|+.
T Consensus       248 ~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~  306 (333)
T 1mqb_A          248 ERPYWELSN-HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK  306 (333)
T ss_dssp             CCTTTTCCH-HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCcccCCH-HHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            999864332 1222222222  111222334456666777            66666654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.76  E-value=1.5e-19  Score=128.42  Aligned_cols=85  Identities=24%  Similarity=0.272  Sum_probs=67.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--------eeeecccccceecccccCCCC---CCcccceeeHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--------TFTLIRGTRGYMAPEWSKNTP---ISVKANVFNYG   69 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~---~~~~~dv~s~G   69 (137)
                      .|+||||||+||+++.++.++++|||+++........        ......|+..|+|||.+....   ++.++|+||+|
T Consensus       154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG  233 (317)
T 2buj_A          154 GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG  233 (317)
T ss_dssp             TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHH
T ss_pred             CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHH
Confidence            3799999999999999999999999998764211100        001233688999999986543   57899999999


Q ss_pred             HHHHHHHhcccchhhh
Q 042492           70 VVLLEIEIVLINWAYK   85 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~   85 (137)
                      +++++|.+|..||...
T Consensus       234 ~il~el~~g~~p~~~~  249 (317)
T 2buj_A          234 CVLYAMMFGEGPYDMV  249 (317)
T ss_dssp             HHHHHHHHSSCTTHHH
T ss_pred             HHHHHHHhCCCChhhh
Confidence            9999999999999754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.76  E-value=4.9e-19  Score=123.76  Aligned_cols=82  Identities=30%  Similarity=0.417  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++.......  .....++..|+|||.+.+..++.++|+||+|+++++|.++..+
T Consensus       143 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~  220 (284)
T 2a19_B          143 LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT  220 (284)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSS
T ss_pred             eeeccCCHHHEEEcCCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCc
Confidence            79999999999999999999999999987643322  2234589999999999888889999999999999999999888


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      +...
T Consensus       221 ~~~~  224 (284)
T 2a19_B          221 AFET  224 (284)
T ss_dssp             HHHH
T ss_pred             chhH
Confidence            7643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.76  E-value=2e-19  Score=129.16  Aligned_cols=85  Identities=28%  Similarity=0.353  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCC--cEEEEecCCceecCCCCc---ceeeecccccceecccccCC--CCCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW--TAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill~~~~--~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||+++.++  .+||+|||+++.......   .......|++.|+|||.+.+  ..++.++|+||+|+++++
T Consensus       189 ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~e  268 (345)
T 3hko_A          189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL  268 (345)
T ss_dssp             EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHH
T ss_pred             ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHH
Confidence            79999999999998665  899999999986532111   11234458999999999865  567889999999999999


Q ss_pred             HHhcccchhhhh
Q 042492           75 IEIVLINWAYKC   86 (137)
Q Consensus        75 l~~~~~~~~~~~   86 (137)
                      |.+|..||....
T Consensus       269 l~~g~~pf~~~~  280 (345)
T 3hko_A          269 LLMGAVPFPGVN  280 (345)
T ss_dssp             HHHSSCSSCCSS
T ss_pred             HHHCCCCCCCCC
Confidence            999999996543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.76  E-value=2e-19  Score=131.38  Aligned_cols=82  Identities=30%  Similarity=0.454  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEe--CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILM--DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill--~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||++  +.++.+||+|||+++.......  .....||+.|+|||++.+..++.++|+||+|+++++|.+|.
T Consensus       208 ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~  285 (373)
T 2x4f_A          208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGL  285 (373)
T ss_dssp             EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSS
T ss_pred             cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCC
Confidence            7999999999999  5678899999999987643322  22345899999999998888899999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       286 ~pf~~~  291 (373)
T 2x4f_A          286 SPFLGD  291 (373)
T ss_dssp             CTTCCS
T ss_pred             CCCCCC
Confidence            999654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.76  E-value=1.1e-19  Score=128.27  Aligned_cols=84  Identities=24%  Similarity=0.326  Sum_probs=69.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.++++|||+++........  ......++..|+|||.+.+..++.++|+||+|+++++|.+|.
T Consensus       147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  226 (302)
T 4e5w_A          147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYC  226 (302)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             cccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHcc
Confidence            799999999999999999999999999876443321  122344777899999998888889999999999999999998


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       227 ~p~~~~  232 (302)
T 4e5w_A          227 DSDSSP  232 (302)
T ss_dssp             CGGGSH
T ss_pred             CCCcch
Confidence            887543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.76  E-value=7.7e-20  Score=128.38  Aligned_cols=124  Identities=21%  Similarity=0.253  Sum_probs=85.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.++++|||+++.........  .....++..|+|||.+.+..++.++|+||+|+++++|.+ +
T Consensus       142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  221 (291)
T 1u46_A          142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG  221 (291)
T ss_dssp             EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             cccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            7999999999999999999999999998764333211  122346778999999988778899999999999999998 9


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      ..||...... +....+...   ..........+.++..+|            ++.++|+...
T Consensus       222 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          222 QEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             CCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            9999654321 222222211   111122234455666667            7777777654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=2e-19  Score=128.81  Aligned_cols=82  Identities=28%  Similarity=0.453  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.  ++.+|++|||+++.......  .....|++.|+|||.+.+..++.++|+||+|+++++|.+|.
T Consensus       123 ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~  200 (321)
T 1tki_A          123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            799999999999986  78999999999987644322  23445899999999998888899999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       201 ~pf~~~  206 (321)
T 1tki_A          201 NPFLAE  206 (321)
T ss_dssp             CTTCCS
T ss_pred             CCCcCC
Confidence            999654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=1.2e-19  Score=127.51  Aligned_cols=123  Identities=22%  Similarity=0.233  Sum_probs=86.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.++++|||+++.........  .....++..|+|||.+.+..++.++|+||+|+++++|.+ |
T Consensus       131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g  210 (287)
T 1u59_A          131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG  210 (287)
T ss_dssp             EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred             EeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCC
Confidence            7999999999999999999999999998764332211  122335788999999987788999999999999999998 9


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||...... +....+...  ...+......+.++...|            ++.+.|+..
T Consensus       211 ~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          211 QKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             CCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            9999654321 122222221  122223334556666677            666666553

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.76  E-value=1e-19  Score=128.11  Aligned_cols=84  Identities=30%  Similarity=0.348  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCccee--eecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.++++|||+++..........  ....++..|+|||.+.+..++.++|+||+|+++++|.+ |
T Consensus       138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g  217 (291)
T 1xbb_A          138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG  217 (291)
T ss_dssp             EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred             eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999987644332211  22235678999999988788899999999999999998 9


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       218 ~~p~~~~  224 (291)
T 1xbb_A          218 QKPYRGM  224 (291)
T ss_dssp             CCSSTTC
T ss_pred             CCCCCCC
Confidence            9999754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.76  E-value=5.1e-19  Score=131.43  Aligned_cols=115  Identities=25%  Similarity=0.319  Sum_probs=75.5

Q ss_pred             eEecCCCCCCEEeCCC-------------CcEEEEecCCceecCCCCcc---eeeecccccceecccccCC-------CC
Q 042492            2 IIHCDIKPHNILMDEF-------------WTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKN-------TP   58 (137)
Q Consensus         2 iiHrdlk~~nill~~~-------------~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~-------~~   58 (137)
                      |+||||||+||+++.+             +.+||+|||+++........   ......||..|+|||++.+       ..
T Consensus       136 ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  215 (434)
T 2rio_A          136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRR  215 (434)
T ss_dssp             EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCC
T ss_pred             ccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccC
Confidence            7999999999999643             47999999999876443221   1123458999999999865       55


Q ss_pred             CCcccceeeHHHHHHHHHh-cccchhhhhcchhhh-hhccCC----ccccHHHHHHHHHHHHHh
Q 042492           59 ISVKANVFNYGVVLLEIEI-VLINWAYKCFIDREF-NKLVHD----EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        59 ~~~~~dv~s~G~~l~el~~-~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~l~C  116 (137)
                      ++.++|+||+||+++||.+ |..||.........+ ......    .........++.++..+|
T Consensus       216 ~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~  279 (434)
T 2rio_A          216 LTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQM  279 (434)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred             cchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHH
Confidence            7889999999999999998 899996543222211 111111    111233445566666677

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=3.4e-19  Score=129.77  Aligned_cols=80  Identities=31%  Similarity=0.374  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....+|..|+|||.+.+ ..++.++|+||+||+++||.+|..
T Consensus       149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  224 (367)
T 1cm8_A          149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT  224 (367)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             ccccCcCHHHEEEcCCCCEEEEeeecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999875332    233458999999998876 668999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       225 pf~~~  229 (367)
T 1cm8_A          225 LFKGS  229 (367)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            99654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.76  E-value=2.5e-19  Score=130.36  Aligned_cols=81  Identities=30%  Similarity=0.503  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.+   +.+||+|||+++.......  .....||+.|+|||++.+..++.++|+||+|+++++|.+|
T Consensus       149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  226 (362)
T 2bdw_A          149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  226 (362)
T ss_dssp             CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHC
Confidence            7999999999999854   4599999999986643222  2334689999999999988899999999999999999999


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       227 ~~Pf~~  232 (362)
T 2bdw_A          227 YPPFWD  232 (362)
T ss_dssp             SCSSCC
T ss_pred             CCCCCC
Confidence            999854

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.76  E-value=6e-20  Score=128.89  Aligned_cols=81  Identities=31%  Similarity=0.616  Sum_probs=59.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc----CCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS----KNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~----~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....|+..|+|||.+    .+..++.++|+||+|+++++|.+
T Consensus       131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~  208 (290)
T 3fme_A          131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI  208 (290)
T ss_dssp             CCCCCCSGGGCEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEECCCCCEEEeecCCccccccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999876533222  2233589999999996    45567889999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       209 g~~p~~~  215 (290)
T 3fme_A          209 LRFPYDS  215 (290)
T ss_dssp             TSCSSCC
T ss_pred             CCCCccc
Confidence            9999964

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.76  E-value=4.2e-20  Score=128.29  Aligned_cols=84  Identities=27%  Similarity=0.418  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++..............++..|+|||.+.+..++.++|+||+|+++++|.+ +..
T Consensus       125 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  204 (267)
T 3t9t_A          125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI  204 (267)
T ss_dssp             CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCC
Confidence            7899999999999999999999999987653221111222346678999999988888999999999999999998 889


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       205 p~~~~  209 (267)
T 3t9t_A          205 PYENR  209 (267)
T ss_dssp             TTTTC
T ss_pred             CCCCC
Confidence            98754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.76  E-value=2e-19  Score=129.88  Aligned_cols=82  Identities=30%  Similarity=0.419  Sum_probs=68.8

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++. ++.+||+|||+++.......  .....||..|+|||.+.+.. ++.++|+||+|+++++|.+|.
T Consensus       152 ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~  229 (360)
T 3e3p_A          152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE  229 (360)
T ss_dssp             CBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             eecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            799999999999996 88999999999987643322  23345899999999886544 789999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       230 ~pf~~~  235 (360)
T 3e3p_A          230 PIFRGD  235 (360)
T ss_dssp             CSSCCS
T ss_pred             CCcCCC
Confidence            999654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.76  E-value=2.8e-19  Score=128.49  Aligned_cols=84  Identities=29%  Similarity=0.467  Sum_probs=71.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......|+..|++||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       162 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  240 (335)
T 2owb_A          162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP  240 (335)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CEecCCCchhEEEcCCCCEEEeeccCceecccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCC
Confidence            79999999999999999999999999987643222 12334589999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       241 f~~~~  245 (335)
T 2owb_A          241 FETSC  245 (335)
T ss_dssp             TCCSS
T ss_pred             CCCCC
Confidence            97543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.76  E-value=4.1e-19  Score=125.16  Aligned_cols=84  Identities=30%  Similarity=0.486  Sum_probs=71.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++........ .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       136 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  214 (294)
T 2rku_A          136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP  214 (294)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccCCChHhEEEcCCCCEEEEeccCceecccCccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999876432221 2334589999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       215 ~~~~~  219 (294)
T 2rku_A          215 FETSC  219 (294)
T ss_dssp             TCCSS
T ss_pred             CCCCC
Confidence            97543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.76  E-value=3.7e-19  Score=127.58  Aligned_cols=82  Identities=30%  Similarity=0.442  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++    .+||+|||+++.......  .....||+.|+|||.+.+..++.++|+||+|+++++|.+
T Consensus       135 ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  212 (326)
T 2y0a_A          135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  212 (326)
T ss_dssp             EECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH
Confidence            79999999999998877    799999999987643222  233458999999999988889999999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       213 g~~pf~~~  220 (326)
T 2y0a_A          213 GASPFLGD  220 (326)
T ss_dssp             SCCSSCCS
T ss_pred             CcCCCCCC
Confidence            99999643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.75  E-value=1.9e-19  Score=132.42  Aligned_cols=83  Identities=25%  Similarity=0.346  Sum_probs=63.2

Q ss_pred             eEecCCCCCCEEe----CCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCC-CCCcccceeeHHHHHHH
Q 042492            2 IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLE   74 (137)
Q Consensus         2 iiHrdlk~~nill----~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~e   74 (137)
                      |+||||||+||++    +.++.+||+|||+++.......  .......||..|+|||++.+. .++.++|+||+||++++
T Consensus       149 ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  228 (405)
T 3rgf_A          149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  228 (405)
T ss_dssp             CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred             EeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHH
Confidence            7999999999999    6778999999999986533211  122345689999999998764 47899999999999999


Q ss_pred             HHhcccchhh
Q 042492           75 IEIVLINWAY   84 (137)
Q Consensus        75 l~~~~~~~~~   84 (137)
                      |.+|..||..
T Consensus       229 ll~g~~pf~~  238 (405)
T 3rgf_A          229 LLTSEPIFHC  238 (405)
T ss_dssp             HHHSSCTTCC
T ss_pred             HHhCCCCCCC
Confidence            9999999953

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.75  E-value=4.2e-19  Score=128.07  Aligned_cols=84  Identities=23%  Similarity=0.257  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+||+|||+++.......   .......||+.|+|||.+.+ ..++.++|+||+|+++++|.+
T Consensus       145 ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  224 (351)
T 3mi9_A          145 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT  224 (351)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             eeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh
Confidence            79999999999999999999999999987642221   12234458999999998875 457899999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       225 g~~pf~~~  232 (351)
T 3mi9_A          225 RSPIMQGN  232 (351)
T ss_dssp             SSCSCCCS
T ss_pred             CCCCCCCC
Confidence            99998653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.75  E-value=3.1e-19  Score=127.23  Aligned_cols=81  Identities=27%  Similarity=0.471  Sum_probs=68.1

Q ss_pred             eEecCCCCCCEEe----CCCCcEEEEecCCceecCCCCcceeeecccccceecccccC--------CCCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK--------NTPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~--------~~~~~~~~dv~s~G   69 (137)
                      |+||||||+||++    +.++.+||+|||+++.......  .....|+..|+|||.+.        +..++.++|+||+|
T Consensus       133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG  210 (319)
T 4euu_A          133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG  210 (319)
T ss_dssp             EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHH
T ss_pred             EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHH
Confidence            7999999999998    7778899999999987644332  22345899999999875        46678999999999


Q ss_pred             HHHHHHHhcccchhh
Q 042492           70 VVLLEIEIVLINWAY   84 (137)
Q Consensus        70 ~~l~el~~~~~~~~~   84 (137)
                      ++++||.+|..||..
T Consensus       211 ~il~el~~g~~pf~~  225 (319)
T 4euu_A          211 VTFYHAATGSLPFRP  225 (319)
T ss_dssp             HHHHHHHHSSCSEEC
T ss_pred             HHHHHHHhCCCCCCC
Confidence            999999999999963

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.75  E-value=2.4e-19  Score=128.54  Aligned_cols=83  Identities=28%  Similarity=0.434  Sum_probs=52.4

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++   .+||+|||+++....... ......||..|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       127 ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  205 (325)
T 3kn6_A          127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG  205 (325)
T ss_dssp             EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------------CCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhC
Confidence            79999999999997654   799999999986543322 22334589999999999888899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       206 ~~pf~~~  212 (325)
T 3kn6_A          206 QVPFQSH  212 (325)
T ss_dssp             SCTTC--
T ss_pred             CCCCCCC
Confidence            9999754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.75  E-value=2.7e-19  Score=125.25  Aligned_cols=82  Identities=28%  Similarity=0.393  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||++.......   .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       130 i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  206 (279)
T 3fdn_A          130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP  206 (279)
T ss_dssp             CEECCCCGGGEEECTTSCEEECSCCEESCC-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             EecccCChHhEEEcCCCCEEEEeccccccCCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCC
Confidence            7999999999999999999999999875432221   2334589999999999888889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       207 ~~~~~  211 (279)
T 3fdn_A          207 FEANT  211 (279)
T ss_dssp             TCCSS
T ss_pred             CCCCc
Confidence            97543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.75  E-value=3.8e-19  Score=133.68  Aligned_cols=83  Identities=27%  Similarity=0.495  Sum_probs=70.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||+.|+|||.+.+..+ +.++|+||+|+++++|.+|..
T Consensus       137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~  214 (476)
T 2y94_A          137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL  214 (476)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCcccccHHHEEEecCCCeEEEeccchhhcccccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCC
Confidence            79999999999999999999999999987643322  233468999999999987765 678999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       215 Pf~~~~  220 (476)
T 2y94_A          215 PFDDDH  220 (476)
T ss_dssp             SSCCSS
T ss_pred             CCCCCC
Confidence            997543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.75  E-value=1.3e-19  Score=127.59  Aligned_cols=83  Identities=25%  Similarity=0.326  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++....... ......+|..|+|||.+.+. .++.++|+||+|+++++|.+|..
T Consensus       121 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  199 (288)
T 1ob3_A          121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP  199 (288)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eecCCCCHHHEEEcCCCCEEEeECccccccCcccc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999876532221 12334589999999998654 47899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 pf~~~  204 (288)
T 1ob3_A          200 LFPGV  204 (288)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            98643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.75  E-value=5.4e-19  Score=123.96  Aligned_cols=82  Identities=28%  Similarity=0.372  Sum_probs=70.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||++.......   .....|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       135 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  211 (284)
T 2vgo_A          135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP  211 (284)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECSSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             ceecCCCHHHEEEcCCCCEEEecccccccCcccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCC
Confidence            7999999999999999999999999987653322   2234589999999999988889999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       212 f~~~~  216 (284)
T 2vgo_A          212 FDSPS  216 (284)
T ss_dssp             TCCSS
T ss_pred             CCCCC
Confidence            96543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.75  E-value=2.7e-19  Score=125.18  Aligned_cols=81  Identities=30%  Similarity=0.404  Sum_probs=63.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++......    ....++..|+|||.+.+..++.++|+||+|+++++|.+ +..
T Consensus       138 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~  213 (278)
T 1byg_A          138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV  213 (278)
T ss_dssp             CCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccccCCCcceEEEeCCCcEEEeeccccccccccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999999999987543221    12246788999999988888999999999999999997 899


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       214 p~~~~~  219 (278)
T 1byg_A          214 PYPRIP  219 (278)
T ss_dssp             SCTTSC
T ss_pred             CCCCCC
Confidence            987543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.75  E-value=2.4e-19  Score=128.44  Aligned_cols=83  Identities=29%  Similarity=0.486  Sum_probs=68.1

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.+||+|||+++.......  .....|++.|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       152 ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g  229 (327)
T 3lm5_A          152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH  229 (327)
T ss_dssp             EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhC
Confidence            799999999999987   78999999999987643222  2334589999999999988899999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       230 ~~pf~~~~  237 (327)
T 3lm5_A          230 TSPFVGED  237 (327)
T ss_dssp             SCSSCCSS
T ss_pred             CCCCCCCC
Confidence            99996543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.75  E-value=2.8e-19  Score=127.95  Aligned_cols=84  Identities=25%  Similarity=0.345  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       121 ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  199 (324)
T 3mtl_A          121 VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRP  199 (324)
T ss_dssp             EEESSCCGGGEEECTTCCEEECSSSEEECC-------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999875532222 2233457999999998876 557899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       200 pf~~~~  205 (324)
T 3mtl_A          200 LFPGST  205 (324)
T ss_dssp             SCCCSS
T ss_pred             CCCCCC
Confidence            996543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.75  E-value=2.4e-19  Score=130.63  Aligned_cols=79  Identities=29%  Similarity=0.310  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCC-------------------------------------------------cEEEEecCCceecC
Q 042492            2 IIHCDIKPHNILMDEFW-------------------------------------------------TAKISDFGLAKLLM   32 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-------------------------------------------------~~kl~dfg~~~~~~   32 (137)
                      |+||||||+||+++.++                                                 .+||+|||+++...
T Consensus       168 ivHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~  247 (397)
T 1wak_A          168 IIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH  247 (397)
T ss_dssp             EECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETT
T ss_pred             EecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccc
Confidence            89999999999998765                                                 79999999998753


Q ss_pred             CCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccchhh
Q 042492           33 PDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLINWAY   84 (137)
Q Consensus        33 ~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~~~~   84 (137)
                      ..    .....||..|+|||++.+..++.++|+||+||++++|.+|..||..
T Consensus       248 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  295 (397)
T 1wak_A          248 KH----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEP  295 (397)
T ss_dssp             BC----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cc----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCC
Confidence            22    2234589999999999888899999999999999999999999964

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.75  E-value=1.6e-19  Score=133.52  Aligned_cols=83  Identities=29%  Similarity=0.420  Sum_probs=61.8

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcceeeecccccceecccccCC---CCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN---TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.+   ..+||+|||+++.....  .......||+.|+|||++.+   ..++.++|+||+|+++++|
T Consensus       260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~l  337 (419)
T 3i6u_A          260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC  337 (419)
T ss_dssp             CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHH
T ss_pred             ccccCCChHhEEEecCCCcceEEEeecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHH
Confidence            7999999999999754   45999999999865322  22234568999999998853   5577899999999999999


Q ss_pred             Hhcccchhhhh
Q 042492           76 EIVLINWAYKC   86 (137)
Q Consensus        76 ~~~~~~~~~~~   86 (137)
                      .+|..||....
T Consensus       338 ltg~~pf~~~~  348 (419)
T 3i6u_A          338 LSGYPPFSEHR  348 (419)
T ss_dssp             HHSSCSSCCCS
T ss_pred             HHCCCCCCCCc
Confidence            99999997543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.75  E-value=3.1e-19  Score=130.10  Aligned_cols=80  Identities=31%  Similarity=0.403  Sum_probs=60.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....||..|+|||.+.+ ..++.++|+||+||++++|.+|..
T Consensus       153 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  228 (367)
T 2fst_X          153 IIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT  228 (367)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECC-------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             eeeCCCCHhhEEECCCCCEEEeecccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999865322    233468999999999876 568899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       229 pf~~~  233 (367)
T 2fst_X          229 LFPGT  233 (367)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.75  E-value=6.3e-19  Score=129.39  Aligned_cols=82  Identities=33%  Similarity=0.500  Sum_probs=69.9

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.  .+.+||+|||+++.......  .....||..|+|||++.+..++.++|+||+|+++++|.+|.
T Consensus       170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  247 (387)
T 1kob_A          170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL  247 (387)
T ss_dssp             EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             eeecccchHHeEEecCCCCceEEEecccceecCCCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCC
Confidence            799999999999974  57799999999987643322  23345899999999999888999999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       248 ~Pf~~~  253 (387)
T 1kob_A          248 SPFAGE  253 (387)
T ss_dssp             CSSCCS
T ss_pred             CCCCCC
Confidence            999754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.75  E-value=1.7e-19  Score=129.01  Aligned_cols=83  Identities=31%  Similarity=0.352  Sum_probs=66.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-ccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++......  ......++..|+|||.+.+..++.++|+||+|+++++|.+ |..
T Consensus       163 ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  240 (327)
T 1fvr_A          163 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  240 (327)
T ss_dssp             EECSCCSGGGEEECGGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccCCCCccceEEEcCCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999987432111  1122346778999999988778899999999999999997 999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       241 pf~~~~  246 (327)
T 1fvr_A          241 PYCGMT  246 (327)
T ss_dssp             TTTTCC
T ss_pred             CCCCCc
Confidence            996543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.74  E-value=4.2e-19  Score=128.82  Aligned_cols=85  Identities=33%  Similarity=0.473  Sum_probs=69.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.........  .....||+.|+|||.+.+ ..++.++|+||+|+++++|.+|
T Consensus       149 ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  228 (364)
T 3qyz_A          149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN  228 (364)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHS
T ss_pred             eecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHC
Confidence            7999999999999999999999999998764322111  133468999999998654 4478999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       229 ~~pf~~~~  236 (364)
T 3qyz_A          229 RPIFPGKH  236 (364)
T ss_dssp             SCSSCCSS
T ss_pred             CCCCCCCC
Confidence            99996543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.74  E-value=5.3e-19  Score=129.16  Aligned_cols=83  Identities=30%  Similarity=0.390  Sum_probs=69.3

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++ .++.+||+|||+++.......  .....++..|+|||.+.+. .++.++|+||+|+++++|.+|.
T Consensus       162 i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  239 (383)
T 3eb0_A          162 ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK  239 (383)
T ss_dssp             EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence            79999999999997 688999999999987643332  2334589999999988764 4889999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       240 ~pf~~~~  246 (383)
T 3eb0_A          240 PLFSGET  246 (383)
T ss_dssp             CSSCCSS
T ss_pred             CCCCCCC
Confidence            9997543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.74  E-value=1.6e-18  Score=128.76  Aligned_cols=84  Identities=32%  Similarity=0.467  Sum_probs=62.2

Q ss_pred             eEecCCCCCCEEeC-----CCCcEEEEecCCceecCCCCc--ceeeecccccceecccccC---CCCCCcccceeeHHHH
Q 042492            2 IIHCDIKPHNILMD-----EFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVV   71 (137)
Q Consensus         2 iiHrdlk~~nill~-----~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~   71 (137)
                      |+||||||+||+++     ....++|+|||+++.......  .......||+.|+|||++.   ...++.++|+||+||+
T Consensus       139 ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i  218 (432)
T 3p23_A          139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV  218 (432)
T ss_dssp             CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred             CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence            79999999999994     334688999999987643221  1223456899999999987   3556778999999999


Q ss_pred             HHHHHh-cccchhhh
Q 042492           72 LLEIEI-VLINWAYK   85 (137)
Q Consensus        72 l~el~~-~~~~~~~~   85 (137)
                      ++||.+ |..||...
T Consensus       219 l~ellt~g~~pf~~~  233 (432)
T 3p23_A          219 FYYVISEGSHPFGKS  233 (432)
T ss_dssp             HHHHHTTSCBTTBST
T ss_pred             HHHHHcCCCCCcchh
Confidence            999999 88898644

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.74  E-value=7.8e-20  Score=127.77  Aligned_cols=84  Identities=29%  Similarity=0.499  Sum_probs=67.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +|+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.++..
T Consensus       136 ~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  214 (279)
T 2w5a_A          136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP  214 (279)
T ss_dssp             --CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eeEEeccchhhEEEcCCCCEEEecCchheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCC
Confidence            389999999999999999999999999876533221 1123358899999999988888999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       215 p~~~~  219 (279)
T 2w5a_A          215 PFTAF  219 (279)
T ss_dssp             SSCCS
T ss_pred             CCccc
Confidence            98654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.74  E-value=5.9e-19  Score=123.01  Aligned_cols=86  Identities=36%  Similarity=0.524  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.++++|||.+........ .......|+..|+|||.+.+..+ +.++|+||+|+++++|.+|.
T Consensus       126 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  205 (276)
T 2yex_A          126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  205 (276)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCC
Confidence            79999999999999999999999999976532221 11233458899999999987665 67899999999999999999


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .||.....
T Consensus       206 ~p~~~~~~  213 (276)
T 2yex_A          206 LPWDQPSD  213 (276)
T ss_dssp             CCCSCSCT
T ss_pred             CCCCCCch
Confidence            99975543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.74  E-value=7.2e-19  Score=126.31  Aligned_cols=80  Identities=28%  Similarity=0.385  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEe-------------------CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcc
Q 042492            2 IIHCDIKPHNILM-------------------DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK   62 (137)
Q Consensus         2 iiHrdlk~~nill-------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~   62 (137)
                      |+||||||+||++                   +.++.+||+|||+++......    ....||..|+|||.+.+..++.+
T Consensus       144 ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~  219 (355)
T 2eu9_A          144 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQP  219 (355)
T ss_dssp             EECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTH
T ss_pred             cccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCc
Confidence            7999999999999                   567889999999998653221    23458999999999988889999


Q ss_pred             cceeeHHHHHHHHHhcccchhhh
Q 042492           63 ANVFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        63 ~dv~s~G~~l~el~~~~~~~~~~   85 (137)
                      +|+||+|++++||.+|..||...
T Consensus       220 ~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          220 CDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cchHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.74  E-value=2.5e-19  Score=128.19  Aligned_cols=85  Identities=31%  Similarity=0.369  Sum_probs=69.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+||||||+||+++.++.++|+|||+++.........  .....++..|+|||.+.+..++.++|+||+|+++++|.++
T Consensus       165 ~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg  244 (326)
T 2w1i_A          165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY  244 (326)
T ss_dssp             TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHT
T ss_pred             CEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhc
Confidence            37999999999999999999999999998764433211  1223466779999999887888999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       245 ~~~~~~~  251 (326)
T 2w1i_A          245 IEKSKSP  251 (326)
T ss_dssp             TCGGGSH
T ss_pred             CCCCCCC
Confidence            8887643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.74  E-value=6.4e-19  Score=125.85  Aligned_cols=81  Identities=23%  Similarity=0.451  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++ .+||+|||+++.......  .....++..|+|||.+.+ ..++.++|+||+|+++++|.+|.
T Consensus       151 ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~  228 (330)
T 3nsz_A          151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  228 (330)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCC
Confidence            79999999999999666 899999999987643322  233458889999999876 56789999999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       229 ~p~~~  233 (330)
T 3nsz_A          229 EPFFH  233 (330)
T ss_dssp             SSSSC
T ss_pred             CCccc
Confidence            99843

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.74  E-value=3.7e-19  Score=126.44  Aligned_cols=124  Identities=22%  Similarity=0.295  Sum_probs=78.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----ceeeecccccceecccccCC---------CCCCcccceeeH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----RTFTLIRGTRGYMAPEWSKN---------TPISVKANVFNY   68 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~---------~~~~~~~dv~s~   68 (137)
                      |+||||||+||+++ ++.++++|||+++.......    .......|+..|+|||.+..         ..++.++|+||+
T Consensus       151 i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~sl  229 (319)
T 2y4i_B          151 ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL  229 (319)
T ss_dssp             CCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHH
T ss_pred             ccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHH
Confidence            78999999999998 57899999999765421111    11223348889999998864         346789999999


Q ss_pred             HHHHHHHHhcccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           69 GVVLLEIEIVLINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        69 G~~l~el~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      |+++++|.+|..||....... ....+...   ..........+.++..+|            ++.++|+....
T Consensus       230 G~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~  302 (319)
T 2y4i_B          230 GTIWYELHAREWPFKTQPAEA-IIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK  302 (319)
T ss_dssp             HHHHHHHHHSSCSSSSCCHHH-HHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred             HHHHHHHHhCCCCCCCCCHHH-HHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999997543221 11122111   111111122345556666            88888887643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.74  E-value=7.4e-19  Score=124.30  Aligned_cols=83  Identities=31%  Similarity=0.400  Sum_probs=70.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (303)
T 3a7i_A          140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP  218 (303)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CccCCCChheEEECCCCCEEEeecccceecCcccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCC
Confidence            79999999999999999999999999987643221 12334588999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       219 ~~~~  222 (303)
T 3a7i_A          219 HSEL  222 (303)
T ss_dssp             TTTS
T ss_pred             CCCc
Confidence            8643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.74  E-value=1.9e-19  Score=127.83  Aligned_cols=82  Identities=33%  Similarity=0.550  Sum_probs=60.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....++..|+|||.+.     ...++.++|+||+|+++++|.
T Consensus       146 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  223 (318)
T 2dyl_A          146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA  223 (318)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCTTC----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH
Confidence            79999999999999999999999999876533221  22345889999999984     455788999999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      ++..||...
T Consensus       224 ~g~~pf~~~  232 (318)
T 2dyl_A          224 TGQFPYKNC  232 (318)
T ss_dssp             HSSCTTTTC
T ss_pred             hCCCCCCCC
Confidence            999999753

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.74  E-value=1.2e-18  Score=124.33  Aligned_cols=80  Identities=29%  Similarity=0.381  Sum_probs=68.6

Q ss_pred             eEecCCCCCCEEeCC-------------------CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcc
Q 042492            2 IIHCDIKPHNILMDE-------------------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK   62 (137)
Q Consensus         2 iiHrdlk~~nill~~-------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~   62 (137)
                      |+||||||+||+++.                   ++.+|++|||+++......    ....||..|+|||.+.+..++.+
T Consensus       139 ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~  214 (339)
T 1z57_A          139 LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQP  214 (339)
T ss_dssp             EECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTH
T ss_pred             CcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcc
Confidence            799999999999987                   6679999999998653221    23458999999999998889999


Q ss_pred             cceeeHHHHHHHHHhcccchhhh
Q 042492           63 ANVFNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        63 ~dv~s~G~~l~el~~~~~~~~~~   85 (137)
                      +|+||+|++++||.+|..||...
T Consensus       215 ~Di~slG~il~el~~g~~pf~~~  237 (339)
T 1z57_A          215 CDVWSIGCILIEYYLGFTVFPTH  237 (339)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999998643

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.73  E-value=1.3e-18  Score=123.42  Aligned_cols=83  Identities=30%  Similarity=0.372  Sum_probs=70.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++++|||++........ ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       146 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  224 (314)
T 3com_A          146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP  224 (314)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             CcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999986533222 12334588999999999888889999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       225 ~~~~  228 (314)
T 3com_A          225 YADI  228 (314)
T ss_dssp             TTTS
T ss_pred             CCCC
Confidence            9754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.73  E-value=9.9e-19  Score=122.44  Aligned_cols=82  Identities=29%  Similarity=0.500  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.   ++++|||++........  .....|+..|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g  203 (284)
T 3kk8_A          126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  203 (284)
T ss_dssp             EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHC
Confidence            799999999999976554   99999999987643222  2334589999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       204 ~~pf~~~  210 (284)
T 3kk8_A          204 YPPFWDE  210 (284)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.73  E-value=1.5e-18  Score=124.78  Aligned_cols=84  Identities=31%  Similarity=0.496  Sum_probs=70.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCc-ccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISV-KANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~-~~dv~s~G~~l~el~~~   78 (137)
                      .|+||||||+||+++.++.++++|||+++.....   ......|+..|+|||.+.+. .++. ++|+||+|+++++|.+|
T Consensus       172 ~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g  248 (348)
T 2pml_X          172 NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN  248 (348)
T ss_dssp             CEECCCCCGGGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             CEeecCCChHhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhC
Confidence            3799999999999999999999999999875332   23344589999999999876 5655 89999999999999999


Q ss_pred             ccchhhhhc
Q 042492           79 LINWAYKCF   87 (137)
Q Consensus        79 ~~~~~~~~~   87 (137)
                      ..||.....
T Consensus       249 ~~pf~~~~~  257 (348)
T 2pml_X          249 VVPFSLKIS  257 (348)
T ss_dssp             SCSSCCSSC
T ss_pred             CCCCCCCCc
Confidence            999975443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.73  E-value=8.1e-19  Score=124.40  Aligned_cols=84  Identities=32%  Similarity=0.451  Sum_probs=65.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... ......|+..|+|||.+.+ ..++.++|+||+|++++++.+|..
T Consensus       123 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  201 (311)
T 4agu_A          123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP  201 (311)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECC-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence            79999999999999999999999999987643222 1233458899999998865 567899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       202 p~~~~~  207 (311)
T 4agu_A          202 LWPGKS  207 (311)
T ss_dssp             SCCCSS
T ss_pred             CCCCCC
Confidence            996543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.73  E-value=6.1e-19  Score=127.23  Aligned_cols=83  Identities=33%  Similarity=0.430  Sum_probs=68.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......+|..|+|||.+.+. .++.++|+||+|+++++|.+|..
T Consensus       133 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  211 (346)
T 1ua2_A          133 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP  211 (346)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EECCCCCHHHEEEcCCCCEEEEecccceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence            78999999999999999999999999876533222 22334589999999998654 47889999999999999999988


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       212 ~~~~~  216 (346)
T 1ua2_A          212 FLPGD  216 (346)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            88654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.73  E-value=1.7e-18  Score=123.52  Aligned_cols=82  Identities=29%  Similarity=0.442  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++    .++++|||+++.......  .....|+..|+|||.+.+..++.++|+||+|+++++|.+
T Consensus       136 ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  213 (321)
T 2a2a_A          136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  213 (321)
T ss_dssp             EECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH
Confidence            79999999999999877    799999999987643322  223458999999999988888999999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       214 g~~pf~~~  221 (321)
T 2a2a_A          214 GASPFLGD  221 (321)
T ss_dssp             SCCSSCCS
T ss_pred             CCCCCCCC
Confidence            99999643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.73  E-value=2.2e-18  Score=121.80  Aligned_cols=84  Identities=31%  Similarity=0.439  Sum_probs=68.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.++++|||+++....... .......|+..|+|||.+.+..  .+.++|+||+|+++++|.+|
T Consensus       130 i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g  209 (305)
T 2wtk_C          130 IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG  209 (305)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHS
T ss_pred             eeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhC
Confidence            79999999999999999999999999987643222 2223445899999999987643  36789999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       210 ~~p~~~~  216 (305)
T 2wtk_C          210 LYPFEGD  216 (305)
T ss_dssp             SCSCCCS
T ss_pred             CCCCCCc
Confidence            9999754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.73  E-value=9.1e-19  Score=128.01  Aligned_cols=85  Identities=12%  Similarity=0.142  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc------ceeeecccccceecccccCC--CCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~   73 (137)
                      |+||||||+||+++.++.+|++|||.+........      .......||..|+|||.+.+  ..++.++|+||+||+++
T Consensus       149 ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~  228 (389)
T 3gni_B          149 YVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITAC  228 (389)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHH
Confidence            79999999999999999999999998765421111      11112357889999999977  56889999999999999


Q ss_pred             HHHhcccchhhhh
Q 042492           74 EIEIVLINWAYKC   86 (137)
Q Consensus        74 el~~~~~~~~~~~   86 (137)
                      +|.+|..||....
T Consensus       229 el~~g~~pf~~~~  241 (389)
T 3gni_B          229 ELANGHVPFKDMP  241 (389)
T ss_dssp             HHHHSSCTTTTCC
T ss_pred             HHHHCCCCCCCCC
Confidence            9999999997543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.73  E-value=7.5e-19  Score=127.28  Aligned_cols=80  Identities=30%  Similarity=0.425  Sum_probs=66.3

Q ss_pred             eEecCCCCCCEEeC------CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMD------EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++      ..+.+||+|||+++.....    .....||..|+|||.+.+..++.++|+||+|+++++|
T Consensus       153 ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  228 (373)
T 1q8y_A          153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  228 (373)
T ss_dssp             EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             EEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHH
Confidence            89999999999994      4457999999999876332    1233589999999999888899999999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       229 ~~g~~pf~~~  238 (373)
T 1q8y_A          229 ITGDFLFEPD  238 (373)
T ss_dssp             HHSSCCC---
T ss_pred             HhCCCCCCCC
Confidence            9999999743

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.72  E-value=5e-19  Score=125.76  Aligned_cols=84  Identities=33%  Similarity=0.497  Sum_probs=62.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCC-----------CCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKN-----------TPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~-----------~~~~~~~dv~s~G   69 (137)
                      |+||||||+||+++. +.+||+|||+++........ ......|+..|+|||.+.+           ..++.++|+||+|
T Consensus       148 ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG  226 (313)
T 3cek_A          148 IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG  226 (313)
T ss_dssp             CCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHH
T ss_pred             ceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHH
Confidence            789999999999965 78999999999865332221 1223458999999999865           3577899999999


Q ss_pred             HHHHHHHhcccchhhhh
Q 042492           70 VVLLEIEIVLINWAYKC   86 (137)
Q Consensus        70 ~~l~el~~~~~~~~~~~   86 (137)
                      +++++|.+|..||....
T Consensus       227 ~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          227 CILYYMTYGKTPFQQII  243 (313)
T ss_dssp             HHHHHHHHSSCTTTTCC
T ss_pred             HHHHHHHhCCCchhhHH
Confidence            99999999999997543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.72  E-value=4.9e-18  Score=118.61  Aligned_cols=81  Identities=23%  Similarity=0.356  Sum_probs=68.3

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||++   +.++.++++|||++........  .....|+..|+|||.+.+. ++.++|+||+|+++++|.+|
T Consensus       127 i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g  203 (277)
T 3f3z_A          127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG  203 (277)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHS
T ss_pred             ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHC
Confidence            7999999999999   7788999999999987643322  2334589999999988654 88999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       204 ~~p~~~~  210 (277)
T 3f3z_A          204 YPPFSAP  210 (277)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.72  E-value=1.3e-18  Score=126.62  Aligned_cols=80  Identities=29%  Similarity=0.362  Sum_probs=65.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....||..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       165 ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  240 (371)
T 4exu_A          165 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT  240 (371)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECSTTCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CcCCCcCHHHeEECCCCCEEEEecCcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999765322    233458999999998876 678899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       241 pf~~~  245 (371)
T 4exu_A          241 LFKGK  245 (371)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.72  E-value=2.2e-18  Score=125.35  Aligned_cols=81  Identities=32%  Similarity=0.537  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC------CCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN------TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~dv~s~G~~l~el   75 (137)
                      |+|||+||.||+++.++.++++|||++........  .....||+.|+|||++.+      ..++.++|+||+|+++++|
T Consensus       221 i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el  298 (365)
T 2y7j_A          221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL  298 (365)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHH
T ss_pred             eecCCCCHHHEEECCCCCEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHH
Confidence            79999999999999999999999999987643322  233468999999998753      3478899999999999999


Q ss_pred             Hhcccchhh
Q 042492           76 EIVLINWAY   84 (137)
Q Consensus        76 ~~~~~~~~~   84 (137)
                      .+|..||..
T Consensus       299 l~g~~pf~~  307 (365)
T 2y7j_A          299 LAGSPPFWH  307 (365)
T ss_dssp             HHSSCSSCC
T ss_pred             HHCCCCCCC
Confidence            999999964

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.72  E-value=1.2e-18  Score=124.20  Aligned_cols=82  Identities=26%  Similarity=0.355  Sum_probs=70.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++......  ......++..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       141 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (326)
T 1blx_A          141 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL  218 (326)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ceeccCCHHHeEEcCCCCEEEecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            7899999999999999999999999987653221  22334588999999999888899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       219 f~~~  222 (326)
T 1blx_A          219 FRGS  222 (326)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            8643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.72  E-value=3.6e-19  Score=128.63  Aligned_cols=82  Identities=27%  Similarity=0.408  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||++...    +.+|++|||+++....... ......||..|+|||.+.+..++.++|+||+|+++++|.+
T Consensus       137 ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  215 (342)
T 2qr7_A          137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT  215 (342)
T ss_dssp             EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc
Confidence            7999999999998532    3599999999987643322 2233458999999999987778889999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       216 g~~Pf~~  222 (342)
T 2qr7_A          216 GYTPFAN  222 (342)
T ss_dssp             SSCSSCS
T ss_pred             CCCCCCC
Confidence            9999975

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.72  E-value=1.2e-18  Score=124.87  Aligned_cols=84  Identities=30%  Similarity=0.382  Sum_probs=65.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++|+|||+++....... ......|+..|+|||.+.+. .++.++|+||+|+++++|.+|..
T Consensus       145 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~  223 (331)
T 4aaa_A          145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP  223 (331)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCTTC-------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCC
Confidence            78999999999999999999999999976533222 22334589999999998765 67889999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       224 pf~~~~  229 (331)
T 4aaa_A          224 LFPGDS  229 (331)
T ss_dssp             SCCCSS
T ss_pred             CCCCCC
Confidence            986543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.72  E-value=1e-18  Score=124.56  Aligned_cols=83  Identities=27%  Similarity=0.356  Sum_probs=62.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.++|+|||++........ ......|+..|+|||.+.     ...++.++|+||+|+++++|.
T Consensus       150 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  228 (326)
T 2x7f_A          150 VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA  228 (326)
T ss_dssp             CCCCCCSGGGEEECTTCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred             ccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence            78999999999999999999999999876532211 122345899999999986     456788999999999999999


Q ss_pred             hcccchhhh
Q 042492           77 IVLINWAYK   85 (137)
Q Consensus        77 ~~~~~~~~~   85 (137)
                      +|..||...
T Consensus       229 ~g~~p~~~~  237 (326)
T 2x7f_A          229 EGAPPLCDM  237 (326)
T ss_dssp             HSSCTTTTS
T ss_pred             hCCCCCCCC
Confidence            999999643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.72  E-value=8.3e-19  Score=123.32  Aligned_cols=83  Identities=31%  Similarity=0.419  Sum_probs=67.2

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC--CCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP--ISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~--~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++. ++.++++|||+++....... ......|+..|+|||.+.+..  ++.++|+||+|+++++|.+|
T Consensus       143 i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g  221 (295)
T 2clq_A          143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG  221 (295)
T ss_dssp             EECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred             EEccCCChhhEEEECCCCCEEEeecccccccCCCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            799999999999987 88999999999987643221 122345889999999986543  78899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       222 ~~pf~~~  228 (295)
T 2clq_A          222 KPPFYEL  228 (295)
T ss_dssp             SCTTGGG
T ss_pred             CCCccCC
Confidence            9999754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.72  E-value=1.3e-18  Score=124.19  Aligned_cols=83  Identities=29%  Similarity=0.412  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCCcceeeecccccceecccccC---CCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK---NTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~---~~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.++.   +||+|||+++......  ......|+..|+|||.+.   ...++.++|+||+|+++++|
T Consensus       135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l  212 (322)
T 2ycf_A          135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC  212 (322)
T ss_dssp             EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHH
Confidence            799999999999986554   9999999998763321  122345899999999863   45678899999999999999


Q ss_pred             Hhcccchhhhh
Q 042492           76 EIVLINWAYKC   86 (137)
Q Consensus        76 ~~~~~~~~~~~   86 (137)
                      .+|..||....
T Consensus       213 ~~g~~pf~~~~  223 (322)
T 2ycf_A          213 LSGYPPFSEHR  223 (322)
T ss_dssp             HHSSCSSCSTT
T ss_pred             HhCCCCCcccc
Confidence            99999996543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.72  E-value=1.8e-18  Score=124.57  Aligned_cols=85  Identities=28%  Similarity=0.416  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---------eeeecccccceecccccCC-CCCCcccceeeHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---------TFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVV   71 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~   71 (137)
                      |+||||||+||+++.++.+||+|||+++........         ......||..|+|||.+.+ ..++.++|+||+|++
T Consensus       133 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  212 (353)
T 2b9h_A          133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI  212 (353)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHH
T ss_pred             eecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHH
Confidence            799999999999999999999999999876432211         1122457899999998654 667889999999999


Q ss_pred             HHHHHhcccchhhhh
Q 042492           72 LLEIEIVLINWAYKC   86 (137)
Q Consensus        72 l~el~~~~~~~~~~~   86 (137)
                      +++|.+|..||....
T Consensus       213 l~~l~~g~~pf~~~~  227 (353)
T 2b9h_A          213 LAELFLRRPIFPGRD  227 (353)
T ss_dssp             HHHHHHSSCSCCCSS
T ss_pred             HHHHHhCCCCCCCCC
Confidence            999999999986543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.71  E-value=1e-18  Score=127.05  Aligned_cols=83  Identities=30%  Similarity=0.329  Sum_probs=59.4

Q ss_pred             eEecCCCCCCEEeCCCCc--EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcc-cceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWT--AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVK-ANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~-~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.  +||+|||+++......  ......||+.|+|||.+.+..++.+ +|+||+|+++++|.+|
T Consensus       137 ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  214 (361)
T 3uc3_A          137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG  214 (361)
T ss_dssp             CCSCCCCGGGEEECSSSSCCEEECCCCCC-----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCHHHEEEcCCCCceEEEeecCccccccccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhC
Confidence            789999999999987665  9999999987432221  1233458999999999987777655 8999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       215 ~~Pf~~~~  222 (361)
T 3uc3_A          215 AYPFEDPE  222 (361)
T ss_dssp             SCSCC---
T ss_pred             CCCCCCCc
Confidence            99997543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.71  E-value=5.7e-19  Score=127.72  Aligned_cols=81  Identities=32%  Similarity=0.524  Sum_probs=68.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.++|+|||+++.....   ......|+..|+|||.+.+..++.++|+||+|+++++|.+|..|
T Consensus       153 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  229 (360)
T 3eqc_A          153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP  229 (360)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred             EEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999998654211   12234589999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       230 f~~~  233 (360)
T 3eqc_A          230 IPPP  233 (360)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9643

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.71  E-value=7.4e-19  Score=125.65  Aligned_cols=84  Identities=29%  Similarity=0.335  Sum_probs=65.9

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.   +..++++|||+++....... .......++..|+|||.+.+..++.++|+||+|+++++|.+
T Consensus       161 i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  240 (327)
T 2yfx_A          161 FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS  240 (327)
T ss_dssp             CCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHc
Confidence            789999999999984   45699999999875422221 11223447889999999988888999999999999999997


Q ss_pred             -cccchhhh
Q 042492           78 -VLINWAYK   85 (137)
Q Consensus        78 -~~~~~~~~   85 (137)
                       |..||...
T Consensus       241 ~g~~p~~~~  249 (327)
T 2yfx_A          241 LGYMPYPSK  249 (327)
T ss_dssp             TSCCSSTTC
T ss_pred             CCCCCCCCc
Confidence             88888654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.71  E-value=1.9e-18  Score=125.05  Aligned_cols=82  Identities=26%  Similarity=0.302  Sum_probs=62.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~  232 (362)
T 3pg1_A          155 VVHRDLHPGNILLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA  232 (362)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             CEecCCChHHEEEcCCCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCC
Confidence            78999999999999999999999999975432221  233458889999998876 567899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       233 pf~~~  237 (362)
T 3pg1_A          233 LFRGS  237 (362)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.71  E-value=1.4e-18  Score=122.10  Aligned_cols=82  Identities=35%  Similarity=0.517  Sum_probs=63.7

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||++   +.++.++|+|||+++.......  .....|+..|+|||.+. ..++.++|+||+|+++++|.+|
T Consensus       145 ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g  221 (285)
T 3is5_A          145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTG  221 (285)
T ss_dssp             CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHS
T ss_pred             EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhC
Confidence            7899999999999   4567899999999976533222  23345899999999886 4578899999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       222 ~~pf~~~~  229 (285)
T 3is5_A          222 CLPFTGTS  229 (285)
T ss_dssp             SCSSCCSS
T ss_pred             CCCCCCCC
Confidence            99997543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.71  E-value=1.1e-18  Score=125.17  Aligned_cols=83  Identities=27%  Similarity=0.314  Sum_probs=62.5

Q ss_pred             eEecCCCCCCEEeC-----CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMD-----EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++     ..+.+||+|||+++....... ......+|..|+|||.+.+. .++.++|+||+|+++++|
T Consensus       153 ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  231 (329)
T 3gbz_A          153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM  231 (329)
T ss_dssp             CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             EECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            79999999999994     455699999999976532222 22334579999999998764 478999999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .++..||...
T Consensus       232 l~g~~pf~~~  241 (329)
T 3gbz_A          232 LMKTPLFPGD  241 (329)
T ss_dssp             HHSSCSSCCS
T ss_pred             HHCCCCcCCC
Confidence            9999998654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.71  E-value=3.2e-18  Score=123.60  Aligned_cols=80  Identities=29%  Similarity=0.362  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++.....    .....++..|+|||.+.+ ..++.++|+||+|+++++|.+|..
T Consensus       147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~  222 (353)
T 3coi_A          147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT  222 (353)
T ss_dssp             CCCSSCCGGGEEECTTCCEEECSTTCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCCCHHHEeECCCCcEEEeecccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999998754321    223458999999998876 567899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       223 pf~~~  227 (353)
T 3coi_A          223 LFKGK  227 (353)
T ss_dssp             SSBSS
T ss_pred             CCCCC
Confidence            99654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.70  E-value=3.8e-18  Score=128.13  Aligned_cols=81  Identities=32%  Similarity=0.440  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeC---CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++   .++.+||+|||+++.......  .....||+.|+|||++.+ .++.++|+||+|+++++|.+|
T Consensus       142 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g  218 (486)
T 3mwu_A          142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG  218 (486)
T ss_dssp             CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHS
T ss_pred             eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhC
Confidence            79999999999995   456799999999976533222  234468999999999875 588999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       219 ~~pf~~~  225 (486)
T 3mwu_A          219 TPPFYGK  225 (486)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.70  E-value=2e-18  Score=123.36  Aligned_cols=81  Identities=33%  Similarity=0.519  Sum_probs=67.8

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++ .++.+||+|||+++......   .....|+..|+|||.+.+..+ +.++|+||+|++++||.+|.
T Consensus       170 ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~  246 (320)
T 3a99_A          170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD  246 (320)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             cEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCC
Confidence            79999999999998 77899999999998764322   223458999999998876665 67789999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       247 ~pf~~~  252 (320)
T 3a99_A          247 IPFEHD  252 (320)
T ss_dssp             CSCCSH
T ss_pred             CCCCCh
Confidence            999643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.70  E-value=3.9e-18  Score=119.99  Aligned_cols=76  Identities=37%  Similarity=0.551  Sum_probs=57.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCC-------------cceeeecccccceecccccCCC-CCCcccceee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-------------TRTFTLIRGTRGYMAPEWSKNT-PISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s   67 (137)
                      |+||||||+||+++.++.++++|||+++......             ........|+..|+|||.+.+. .++.++|+||
T Consensus       137 i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s  216 (303)
T 1zy4_A          137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS  216 (303)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHH
T ss_pred             eecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHH
Confidence            7899999999999999999999999987653211             1112234588999999998754 6788999999


Q ss_pred             HHHHHHHHHh
Q 042492           68 YGVVLLEIEI   77 (137)
Q Consensus        68 ~G~~l~el~~   77 (137)
                      +|+++++|.+
T Consensus       217 lG~il~~l~~  226 (303)
T 1zy4_A          217 LGIIFFEMIY  226 (303)
T ss_dssp             HHHHHHHHHS
T ss_pred             HHHHHHHHHh
Confidence            9999999987

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.70  E-value=7.9e-18  Score=117.55  Aligned_cols=77  Identities=23%  Similarity=0.291  Sum_probs=62.4

Q ss_pred             eEecCCCCCCEEeCC-------------------CCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCc
Q 042492            2 IIHCDIKPHNILMDE-------------------FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISV   61 (137)
Q Consensus         2 iiHrdlk~~nill~~-------------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~   61 (137)
                      |+||||||+||+++.                   ...++++|||.+.......     ...|+..|+|||.+.+. .++.
T Consensus       136 ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~  210 (289)
T 1x8b_A          136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLP  210 (289)
T ss_dssp             EECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHH
T ss_pred             EeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCc
Confidence            799999999999984                   4478999999998764322     22488999999998765 4567


Q ss_pred             ccceeeHHHHHHHHHhcccchh
Q 042492           62 KANVFNYGVVLLEIEIVLINWA   83 (137)
Q Consensus        62 ~~dv~s~G~~l~el~~~~~~~~   83 (137)
                      ++|+||+|++++++.++..++.
T Consensus       211 ~~Di~slG~il~~l~~~~~~~~  232 (289)
T 1x8b_A          211 KADIFALALTVVCAAGAEPLPR  232 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCS
T ss_pred             hhhHHHHHHHHHHHhcCCCCCc
Confidence            8999999999999988876654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.70  E-value=5.3e-18  Score=127.65  Aligned_cols=81  Identities=30%  Similarity=0.453  Sum_probs=67.3

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.+||+|||+++......  ......||+.|+|||++. ..++.++|+||+|+++++|.+|
T Consensus       157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g  233 (494)
T 3lij_A          157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAG  233 (494)
T ss_dssp             EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhC
Confidence            799999999999975   4559999999998764322  223446999999999886 4688999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       234 ~~pf~~~  240 (494)
T 3lij_A          234 YPPFGGQ  240 (494)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.70  E-value=8.3e-19  Score=128.75  Aligned_cols=81  Identities=27%  Similarity=0.469  Sum_probs=67.0

Q ss_pred             eEecCCCCCCEEe----CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC--------CCCCcccceeeHH
Q 042492            2 IIHCDIKPHNILM----DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN--------TPISVKANVFNYG   69 (137)
Q Consensus         2 iiHrdlk~~nill----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~--------~~~~~~~dv~s~G   69 (137)
                      |+||||||+||++    +.++.+||+|||+++......  ......|+..|+|||.+..        ..++.++|+||+|
T Consensus       133 ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG  210 (396)
T 4eut_A          133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG  210 (396)
T ss_dssp             EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHH
T ss_pred             EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHH
Confidence            7999999999998    777789999999998764322  2233458999999998754        4567889999999


Q ss_pred             HHHHHHHhcccchhh
Q 042492           70 VVLLEIEIVLINWAY   84 (137)
Q Consensus        70 ~~l~el~~~~~~~~~   84 (137)
                      ++++||.+|..||..
T Consensus       211 ~il~el~tg~~Pf~~  225 (396)
T 4eut_A          211 VTFYHAATGSLPFRP  225 (396)
T ss_dssp             HHHHHHHHSSCSEEC
T ss_pred             HHHHHHHHCCCCCCC
Confidence            999999999999964

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.69  E-value=7.5e-18  Score=117.87  Aligned_cols=82  Identities=28%  Similarity=0.456  Sum_probs=67.1

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++    .++++|||+++.......  .....++..|+|||.+.+..++.++|+||+|+++++|.+
T Consensus       129 i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  206 (283)
T 3bhy_A          129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  206 (283)
T ss_dssp             EECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH
Confidence            79999999999998776    799999999987633222  223458899999999988888999999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       207 g~~p~~~~  214 (283)
T 3bhy_A          207 GASPFLGE  214 (283)
T ss_dssp             SSCTTCCS
T ss_pred             CCCCCCCc
Confidence            99999654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.69  E-value=4.6e-18  Score=120.37  Aligned_cols=81  Identities=31%  Similarity=0.465  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||++   +.++.++++|||+++......   .....|+..|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       127 i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  203 (304)
T 2jam_A          127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG  203 (304)
T ss_dssp             CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHS
T ss_pred             ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHC
Confidence            7899999999999   678899999999987543221   1233489999999999988899999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       204 ~~pf~~~  210 (304)
T 2jam_A          204 YPPFYEE  210 (304)
T ss_dssp             SCTTTTS
T ss_pred             CCCCCCC
Confidence            9999654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.69  E-value=1.9e-18  Score=129.60  Aligned_cols=81  Identities=28%  Similarity=0.397  Sum_probs=67.9

Q ss_pred             eEecCCCCCCEEe---CCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||++   +.++.+||+|||+++.......  .....||+.|+|||.+.+ .++.++|+||+|+++++|.+|
T Consensus       147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g  223 (484)
T 3nyv_A          147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG  223 (484)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHC
Confidence            7999999999999   4678899999999986643322  233458999999999865 588999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       224 ~~pf~~~  230 (484)
T 3nyv_A          224 CPPFNGA  230 (484)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.69  E-value=2.3e-18  Score=122.27  Aligned_cols=84  Identities=26%  Similarity=0.367  Sum_probs=63.1

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCCc------ceeeecccccceecccccCC-----CCCCcccceee
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKN-----TPISVKANVFN   67 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~-----~~~~~~~dv~s   67 (137)
                      |+||||||+||+++.++.   +|++|||+++.......      .......|+..|+|||.+..     ..++.++|+||
T Consensus       132 ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws  211 (316)
T 2ac3_A          132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS  211 (316)
T ss_dssp             CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHH
T ss_pred             ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHh
Confidence            789999999999987665   99999999875432111      11123358999999998864     45788999999


Q ss_pred             HHHHHHHHHhcccchhhh
Q 042492           68 YGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        68 ~G~~l~el~~~~~~~~~~   85 (137)
                      +|+++++|.+|..||...
T Consensus       212 lG~il~~l~~g~~pf~~~  229 (316)
T 2ac3_A          212 LGVILYILLSGYPPFVGR  229 (316)
T ss_dssp             HHHHHHHHHHSSCSCCCC
T ss_pred             HHHHHHHHHHCCCCCccc
Confidence            999999999999999654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.69  E-value=1.1e-17  Score=126.13  Aligned_cols=81  Identities=33%  Similarity=0.473  Sum_probs=67.9

Q ss_pred             eEecCCCCCCEEeCCCC---cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++   .+||+|||+++.......  .....||+.|+|||.+. ..++.++|+||+|+++++|.+|
T Consensus       167 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g  243 (504)
T 3q5i_A          167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG  243 (504)
T ss_dssp             EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHS
T ss_pred             eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhC
Confidence            79999999999998765   699999999987643322  23345899999999986 4588999999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       244 ~~pf~~~  250 (504)
T 3q5i_A          244 YPPFGGQ  250 (504)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9999654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.68  E-value=4.2e-18  Score=122.49  Aligned_cols=82  Identities=24%  Similarity=0.314  Sum_probs=51.3

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.+||+|||+++......   .....+++.|+|||.+.+..++.++|+||+|+++++|.+|
T Consensus       149 ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g  225 (336)
T 3fhr_A          149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG  225 (336)
T ss_dssp             EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHS
T ss_pred             eecCCCCHHHEEEEecCCCceEEEeccccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHC
Confidence            799999999999975   4559999999998653222   2234578999999999888888999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       226 ~~pf~~~~  233 (336)
T 3fhr_A          226 FPPFYSNT  233 (336)
T ss_dssp             SCCC----
T ss_pred             CCCCCCcc
Confidence            99996543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.68  E-value=1.3e-17  Score=117.50  Aligned_cols=82  Identities=28%  Similarity=0.501  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC------CCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK------NTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~------~~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.++.++++|||+++.......  .....++..|+|||.+.      ...++.++|+||+|+++++|
T Consensus       145 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l  222 (298)
T 1phk_A          145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  222 (298)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             cccCCCCcceEEEcCCCcEEEecccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHH
Confidence            79999999999999999999999999987643322  23345889999999874      34578899999999999999


Q ss_pred             Hhcccchhhh
Q 042492           76 EIVLINWAYK   85 (137)
Q Consensus        76 ~~~~~~~~~~   85 (137)
                      .+|..||...
T Consensus       223 ~~g~~p~~~~  232 (298)
T 1phk_A          223 LAGSPPFWHR  232 (298)
T ss_dssp             HHSSCSSCCS
T ss_pred             HHCCCCCcCc
Confidence            9999998643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.68  E-value=5.4e-18  Score=118.21  Aligned_cols=82  Identities=27%  Similarity=0.515  Sum_probs=61.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||++........  .....++..|+|||.+.+..+ +.++|+||+|+++++|.+|..
T Consensus       132 i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~  209 (276)
T 2h6d_A          132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL  209 (276)
T ss_dssp             SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSC
T ss_pred             CccCCCChhhEEECCCCCEEEeecccccccCCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999876533221  223358899999999987665 578999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       210 p~~~~  214 (276)
T 2h6d_A          210 PFDDE  214 (276)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            98643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.67  E-value=3.1e-18  Score=120.67  Aligned_cols=85  Identities=27%  Similarity=0.425  Sum_probs=65.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc----ceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----RTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.++++|||+++.......    .......|+..|+|||.+.+ ..++.++|+||+|+++++|.
T Consensus       142 i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  221 (303)
T 2vwi_A          142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA  221 (303)
T ss_dssp             CCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH
Confidence            78999999999999999999999998875532211    11123458899999998865 45788999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       222 ~g~~pf~~~~  231 (303)
T 2vwi_A          222 TGAAPYHKYP  231 (303)
T ss_dssp             HSSCTTTTSC
T ss_pred             hCCCCCccCc
Confidence            9999997543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.67  E-value=9.9e-18  Score=118.82  Aligned_cols=85  Identities=24%  Similarity=0.361  Sum_probs=66.0

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++ .++.+||+|||+++.......  .......++..|+|||.+.+ ..++.++|+||+|+++++|.+
T Consensus       141 i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~  220 (320)
T 2i6l_A          141 VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT  220 (320)
T ss_dssp             CBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh
Confidence            79999999999997 567899999999986532211  11223346889999998754 567889999999999999999


Q ss_pred             cccchhhhh
Q 042492           78 VLINWAYKC   86 (137)
Q Consensus        78 ~~~~~~~~~   86 (137)
                      |..||....
T Consensus       221 g~~pf~~~~  229 (320)
T 2i6l_A          221 GKTLFAGAH  229 (320)
T ss_dssp             SSCSSCCSS
T ss_pred             CCCCCCCCC
Confidence            999996543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.66  E-value=1.5e-17  Score=119.33  Aligned_cols=77  Identities=12%  Similarity=0.041  Sum_probs=63.6

Q ss_pred             eEecCCCCCCEEeCCCC--------------------cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCc
Q 042492            2 IIHCDIKPHNILMDEFW--------------------TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV   61 (137)
Q Consensus         2 iiHrdlk~~nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~   61 (137)
                      |+||||||+|||++.++                    .+||+|||+++.....      ...||+.|+|||++.+.. +.
T Consensus       183 ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~~-~~  255 (336)
T 2vuw_A          183 FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDG-DY  255 (336)
T ss_dssp             CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCCS-SH
T ss_pred             EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccChhhhcCCC-cc
Confidence            79999999999999876                    8999999999876322      235899999999998766 88


Q ss_pred             ccceeeHHHH-HHHHHhcccchhhh
Q 042492           62 KANVFNYGVV-LLEIEIVLINWAYK   85 (137)
Q Consensus        62 ~~dv~s~G~~-l~el~~~~~~~~~~   85 (137)
                      ++|+||++++ ..++..+..||...
T Consensus       256 ~~Diwsl~~~~~~~~~~g~~p~~~~  280 (336)
T 2vuw_A          256 QFDIYRLMKKENNNRWGEYHPYSNV  280 (336)
T ss_dssp             HHHHHHHHHHHHTTCTTSCCTHHHH
T ss_pred             ceehhhhhCCCCcccccccCCCcch
Confidence            9999998776 55677788888653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.66  E-value=2.5e-18  Score=121.37  Aligned_cols=84  Identities=30%  Similarity=0.417  Sum_probs=65.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceeccccc-----CCCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWS-----KNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~-----~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.++++|||++...... ........|+..|+|||.+     ....++.++|+||+|+++++|.
T Consensus       138 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  216 (302)
T 2j7t_A          138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA  216 (302)
T ss_dssp             CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHEEECCCCCEEEEECCCCcccccc-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh
Confidence            789999999999999999999999986532111 0111233588999999987     3566788999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      ++..||....
T Consensus       217 ~g~~p~~~~~  226 (302)
T 2j7t_A          217 QIEPPHHELN  226 (302)
T ss_dssp             HSSCTTTTSC
T ss_pred             cCCCCCccCC
Confidence            9999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.66  E-value=2e-17  Score=117.32  Aligned_cols=81  Identities=35%  Similarity=0.568  Sum_probs=67.6

Q ss_pred             eEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+|||||++||+++ .++.++++|||+++......   .....|+..|+|||.+.+..+ +.++|+||+|++++++.+|.
T Consensus       160 i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~  236 (312)
T 2iwi_A          160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD  236 (312)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             eeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence            79999999999998 78899999999998764322   233458999999998876665 45899999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       237 ~pf~~~  242 (312)
T 2iwi_A          237 IPFERD  242 (312)
T ss_dssp             CSCCSH
T ss_pred             CCCCCh
Confidence            999643

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.65  E-value=3.6e-17  Score=127.42  Aligned_cols=76  Identities=26%  Similarity=0.455  Sum_probs=64.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.+ .+||+|||+++.....     ....||+.|++||++.+.. +.++|+||||+++++|.++..+
T Consensus       203 iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~  275 (681)
T 2pzi_A          203 LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPT  275 (681)
T ss_dssp             EECCCCSGGGEEECSS-CEEECCCTTCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCE
T ss_pred             CeecccChHHeEEeCC-cEEEEecccchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCC
Confidence            7999999999999885 8999999999876432     2345899999999887654 7899999999999999999887


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       276 ~~~  278 (681)
T 2pzi_A          276 RNG  278 (681)
T ss_dssp             ETT
T ss_pred             Ccc
Confidence            764

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.64  E-value=1.2e-16  Score=124.21  Aligned_cols=81  Identities=31%  Similarity=0.412  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCc---EEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWT---AKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~---~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.   ++++|||+++.......  .....|+..|+|||.+.+..++.++|+||+|++++++.+|
T Consensus       142 IVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG  219 (676)
T 3qa8_A          142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG  219 (676)
T ss_dssp             BCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSS
T ss_pred             CccCCCCHHHeEeecCCCceeEEEcccccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHC
Confidence            799999999999986554   89999999987643322  2334689999999999988899999999999999999999


Q ss_pred             ccchhh
Q 042492           79 LINWAY   84 (137)
Q Consensus        79 ~~~~~~   84 (137)
                      ..||..
T Consensus       220 ~~Pf~~  225 (676)
T 3qa8_A          220 FRPFLP  225 (676)
T ss_dssp             CSSCCS
T ss_pred             CCCCCc
Confidence            999854

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.61  E-value=1.7e-17  Score=127.06  Aligned_cols=77  Identities=18%  Similarity=0.091  Sum_probs=46.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      ||||||||+|||++.++.+||+|||+++........ ....+||+.|++||.+.+. ...++|+|++|+..+++..+..
T Consensus       360 IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~-~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          360 FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW-PTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             CEESCCCGGGEEECTTSCEEECCCTTEESCC---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             ceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc-ccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence            799999999999999999999999999876433222 2345699999999998754 5677999999998877644433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.60  E-value=1.3e-16  Score=112.08  Aligned_cols=81  Identities=32%  Similarity=0.441  Sum_probs=65.3

Q ss_pred             eEecCCCCCCEEeCCC---CcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEF---WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.+   +.+|++|||+++.......  .....++..|+|||.+.+ .++.++|+||+|+++++|.+|
T Consensus       142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g  218 (287)
T 2wei_A          142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSG  218 (287)
T ss_dssp             CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             eeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhC
Confidence            7899999999999753   4699999999876533221  122347889999998865 478899999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       219 ~~p~~~~  225 (287)
T 2wei_A          219 TPPFYGK  225 (287)
T ss_dssp             SCSSCCS
T ss_pred             CCCCCCC
Confidence            9998653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.45  E-value=3e-14  Score=100.63  Aligned_cols=61  Identities=25%  Similarity=0.379  Sum_probs=51.8

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   ++.++++|||+++...                       +..++.++|+||+|+++++|.+|
T Consensus       138 i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             EECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCHHHEEEecCCCCCcEEEeccccccccc-----------------------cccCCchhhHHHHHHHHHHHHHC
Confidence            799999999999997   7889999999986542                       12356789999999999999999


Q ss_pred             ccchhhh
Q 042492           79 LINWAYK   85 (137)
Q Consensus        79 ~~~~~~~   85 (137)
                      ..||...
T Consensus       195 ~~pf~~~  201 (299)
T 3m2w_A          195 YPPFYSN  201 (299)
T ss_dssp             SCSCCC-
T ss_pred             CCCCCCC
Confidence            9999654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.40  E-value=4e-14  Score=99.81  Aligned_cols=58  Identities=7%  Similarity=-0.039  Sum_probs=48.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+++++++                     |++       .++.++|+||+|+++|+|.+|..|
T Consensus       150 ivH~Dikp~NIll~~~g~~kl~~~~---------------------~~~-------~~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          150 VALSIDHPSRVRVSIDGDVVLAYPA---------------------TMP-------DANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             CCCCCCSGGGEEEETTSCEEECSCC---------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             CccCCCCcccEEEcCCCCEEEEecc---------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCC
Confidence            7899999999999999999887432                     222       257889999999999999999999


Q ss_pred             hhhhhc
Q 042492           82 WAYKCF   87 (137)
Q Consensus        82 ~~~~~~   87 (137)
                      |.....
T Consensus       202 f~~~~~  207 (286)
T 3uqc_A          202 LPEAGV  207 (286)
T ss_dssp             SCCCSB
T ss_pred             CCcCCc
Confidence            976543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.21  E-value=4.5e-13  Score=102.11  Aligned_cols=79  Identities=19%  Similarity=0.202  Sum_probs=60.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce------eeecccccceecccccCC--CCCCcccceeeHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT------FTLIRGTRGYMAPEWSKN--TPISVKANVFNYGVVLL   73 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~ape~~~~--~~~~~~~dv~s~G~~l~   73 (137)
                      |+||||||+||+++.  .+||+|||+++.........      .....||+.|+|||++..  ..|+...|+|+..+-.+
T Consensus       452 IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l  529 (540)
T 3en9_A          452 VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELM  529 (540)
T ss_dssp             EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred             CccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            799999999999998  99999999999864322211      124568999999999876  44667789999877776


Q ss_pred             HHHhcccch
Q 042492           74 EIEIVLINW   82 (137)
Q Consensus        74 el~~~~~~~   82 (137)
                      +-.....+|
T Consensus       530 ~~v~~r~rY  538 (540)
T 3en9_A          530 KDVERRARY  538 (540)
T ss_dssp             HHHHTCSCC
T ss_pred             HHHHhcccc
Confidence            665555444

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.39  E-value=1.8e-07  Score=65.74  Aligned_cols=29  Identities=28%  Similarity=0.287  Sum_probs=26.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+||||||+||+++ ++.++|+|||+++..
T Consensus       214 iiHrDlkp~NILl~-~~~vkl~DFG~a~~~  242 (282)
T 1zar_A          214 IVHGDLSQYNVLVS-EEGIWIIDFPQSVEV  242 (282)
T ss_dssp             EECSCCSTTSEEEE-TTEEEECCCTTCEET
T ss_pred             CEeCCCCHHHEEEE-CCcEEEEECCCCeEC
Confidence            79999999999999 999999999998753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.25  E-value=7.3e-07  Score=61.68  Aligned_cols=28  Identities=29%  Similarity=0.461  Sum_probs=25.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      |+|||+||.||+++.  .++++|||++...
T Consensus       192 ivHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          192 LVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            799999999999988  8999999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.06  E-value=0.00022  Score=52.45  Aligned_cols=30  Identities=33%  Similarity=0.361  Sum_probs=25.0

Q ss_pred             eEecCCCCCCEEeCCCC----------cEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFW----------TAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----------~~kl~dfg~~~~~   31 (137)
                      ||||||||.|||++.++          .+.++||+-+...
T Consensus       226 IVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          226 LIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             CcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            79999999999998665          3789999876543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.72  E-value=0.00058  Score=46.30  Aligned_cols=29  Identities=21%  Similarity=0.209  Sum_probs=24.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.||+++.+...+++||+.+..
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            79999999999998776677999997653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.64  E-value=0.00012  Score=51.48  Aligned_cols=82  Identities=22%  Similarity=0.317  Sum_probs=48.3

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeec----cc---------ccceec-ccccCCCCCCcccce
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLI----RG---------TRGYMA-PEWSKNTPISVKANV   65 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~----~~---------~~~~~a-pe~~~~~~~~~~~dv   65 (137)
                      ++|+|+++.|++++.  ...+.++||+.+..............    .+         ..+... |+....  .....+.
T Consensus       193 ~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~~~~  270 (304)
T 3sg8_A          193 LIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK--YRMKEKY  270 (304)
T ss_dssp             EECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH--HHHHHHH
T ss_pred             eEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH--HHHHHHH
Confidence            689999999999987  55678999998875422110000000    00         000011 111110  0112478


Q ss_pred             eeHHHHHHHHHhcccchhhh
Q 042492           66 FNYGVVLLEIEIVLINWAYK   85 (137)
Q Consensus        66 ~s~G~~l~el~~~~~~~~~~   85 (137)
                      |+++.+++.+.+|..+|...
T Consensus       271 ~~l~~~~~~~~~g~~~~~~~  290 (304)
T 3sg8_A          271 WSFEKIIYGKEYGYMDWYEE  290 (304)
T ss_dssp             HHHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHHHHcCCHHHHHH
Confidence            99999999999998887644

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.17  E-value=0.0028  Score=43.21  Aligned_cols=29  Identities=21%  Similarity=0.263  Sum_probs=24.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.||+++.+....++||+.+..
T Consensus       185 l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            68999999999998765668999987643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.86  E-value=0.0048  Score=44.16  Aligned_cols=30  Identities=23%  Similarity=0.358  Sum_probs=25.3

Q ss_pred             eEecCCCCCCEEeCCCCc--EEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWT--AKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~--~kl~dfg~~~~~   31 (137)
                      ++|+|+++.||+++.++.  +.+.||+.+...
T Consensus       218 lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          218 IVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             EECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             EEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence            699999999999987643  689999988753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.30  E-value=0.01  Score=41.82  Aligned_cols=29  Identities=21%  Similarity=0.208  Sum_probs=25.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++.++.+.++||+.+..
T Consensus       224 l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          224 LCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             EECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             eecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            69999999999998778899999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=94.68  E-value=0.019  Score=39.22  Aligned_cols=29  Identities=24%  Similarity=0.299  Sum_probs=25.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++..+.+.|+||+.+..
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            68999999999999877778999987653

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.53  E-value=0.021  Score=41.88  Aligned_cols=29  Identities=14%  Similarity=0.218  Sum_probs=25.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+|+++.||+++.++ +++.||+.+...
T Consensus       234 liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          234 LIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             EECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             EEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            68999999999998766 999999988753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=94.06  E-value=0.021  Score=40.00  Aligned_cols=29  Identities=24%  Similarity=0.242  Sum_probs=24.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++.+....++||+.+..
T Consensus       189 liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          189 VIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCCCCCccCEEEeCCceEEEecchhccC
Confidence            68999999999998776668999987653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=93.80  E-value=0.037  Score=38.81  Aligned_cols=29  Identities=34%  Similarity=0.532  Sum_probs=24.1

Q ss_pred             eEecCCCCCCEEeCC---CCc-EEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDE---FWT-AKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~-~kl~dfg~~~~   30 (137)
                      ++|+|+++.|++++.   ++. ..++||+.+..
T Consensus       192 ~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          192 LIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             EECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             eEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            589999999999987   344 58999987764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=93.71  E-value=0.036  Score=39.14  Aligned_cols=30  Identities=30%  Similarity=0.283  Sum_probs=25.8

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~~~   31 (137)
                      ++|+|+.+.||+++.+    ..+.+.||+.+...
T Consensus       185 lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          185 FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             EECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            6899999999999864    67899999988654

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=93.17  E-value=0.029  Score=39.91  Aligned_cols=29  Identities=21%  Similarity=0.442  Sum_probs=24.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++.+..+.++||..+..
T Consensus       224 l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          224 LLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             EECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             EEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            68999999999998644578999987754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=91.97  E-value=0.074  Score=37.29  Aligned_cols=27  Identities=26%  Similarity=0.202  Sum_probs=23.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+++.||+++ + .+.++||..+..
T Consensus       197 l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          197 RLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             ECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             eeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            58999999999998 4 889999987654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=90.45  E-value=0.17  Score=36.25  Aligned_cols=28  Identities=21%  Similarity=0.408  Sum_probs=22.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++.+. +.++||..+..
T Consensus       214 l~HgDl~~~Nil~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          214 FCHNDLQENNIINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred             EEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence            68999999999998654 88999987653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=90.33  E-value=0.13  Score=36.70  Aligned_cols=30  Identities=27%  Similarity=0.328  Sum_probs=26.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+|+.+.|++++.++.+.+.||..+...
T Consensus       208 ~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          208 LCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             EECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             eEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            689999999999987778999999877643

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=90.30  E-value=0.2  Score=36.22  Aligned_cols=29  Identities=28%  Similarity=0.342  Sum_probs=24.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+|+.+.||+++.+ .+++.||..+...
T Consensus       229 L~HGDl~~~Nil~~~~-~~~lID~e~a~~G  257 (397)
T 2olc_A          229 LIHGDLHTGSIFASEH-ETKVIDPEFAFYG  257 (397)
T ss_dssp             EECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred             eeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence            6899999999999865 4889999877643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=89.19  E-value=0.2  Score=34.74  Aligned_cols=28  Identities=29%  Similarity=0.308  Sum_probs=23.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++ ..++.+.++||..+..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            589999999999 5556789999987754

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=86.90  E-value=0.44  Score=35.55  Aligned_cols=14  Identities=36%  Similarity=0.790  Sum_probs=13.1

Q ss_pred             eEecCCCCCCEEeC
Q 042492            2 IIHCDIKPHNILMD   15 (137)
Q Consensus         2 iiHrdlk~~nill~   15 (137)
                      ++|.|+.+.||+++
T Consensus       292 ~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          292 LCHCDLLSSNIINT  305 (458)
T ss_dssp             EECSCCCGGGEEEC
T ss_pred             EEecCCCCCcEEee
Confidence            58999999999998

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=86.83  E-value=0.27  Score=36.31  Aligned_cols=16  Identities=31%  Similarity=0.501  Sum_probs=13.8

Q ss_pred             eEecCCCCCCEEeCCC
Q 042492            2 IIHCDIKPHNILMDEF   17 (137)
Q Consensus         2 iiHrdlk~~nill~~~   17 (137)
                      ++|+|+.+.||+++.+
T Consensus       251 ~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          251 FCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EECSCCCGGGEEEEC-
T ss_pred             EEeCCCCCCeEEeeCC
Confidence            5899999999999874

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=85.85  E-value=0.46  Score=34.56  Aligned_cols=29  Identities=28%  Similarity=0.311  Sum_probs=24.7

Q ss_pred             eEecCCCCCCEEeCCC----CcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEF----WTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~----~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       222 ~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          222 FCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            6899999999999865    6789999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	137
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-21
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-20
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-20
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	8e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-19
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-18
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	6e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-16
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-14
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-13
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-12
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	8e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	8e-12
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-04

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 2e-21
 Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I+H D+KP NIL++     K+ DFG++  L+     +F    GTR YM+PE  + T  SV
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182

Query: 62  KANVFNYGVVLLEI 75
           ++++++ G+ L+E+
Sbjct: 183 QSDIWSMGLSLVEM 196

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.9 bits (202), Expect = 2e-20
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ-TRTFTLIRGTRGYMAPEW---SKNT 57
           IIH D+K +NI + E  T KI DFGLA +      +  F  + G+  +MAPE        
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184

Query: 58  PISVKANVFNYGVVLLEI 75
           P S +++V+ +G+VL E+
Sbjct: 185 PYSFQSDVYAFGIVLYEL 202

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.8 bits (199), Expect = 4e-20
 Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+ +D     K+ DFGLA++L  D +     +  T  YM+PE       + 
Sbjct: 135 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG-TPYYMSPEQMNRMSYNE 193

Query: 62  KANVFNYGVVLLEI 75
           K+++++ G +L E+
Sbjct: 194 KSDIWSLGCLLYEL 207

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.5 bits (198), Expect = 7e-20
 Identities = 21/74 (28%), Positives = 44/74 (59%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D++  NIL+ E    K++DFGLA+L+  ++       +    + APE +     ++
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 193

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L E+
Sbjct: 194 KSDVWSFGILLTEL 207

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 8e-20
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 2   IIHCDIKPHNILM-DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           IIH D+K  NI +     + KI D GLA L      +      GT  +MAPE  +     
Sbjct: 135 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV---IGTPEFMAPEMYEE-KYD 190

Query: 61  VKANVFNYGVVLLEI 75
              +V+ +G+ +LE+
Sbjct: 191 ESVDVYAFGMCMLEM 205

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 5e-19
 Identities = 23/74 (31%), Positives = 44/74 (59%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D++  NIL+ +  + KI+DFGLA+L+  ++       +    + APE       ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 190 KSDVWSFGILLTEI 203

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 7e-19
 Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 16/140 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL--IRGTRGYMAPEWSKNTPI 59
            +H D+   NIL++     K+SDFGL+++L  D   T+T    +    + APE       
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 190

Query: 60  SVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE--EVNKKTLENMIKVRLWC- 116
           +  ++V+++G+V+ E+        ++         +               + ++ + C 
Sbjct: 191 TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCW 250

Query: 117 -----------SVVMMLEGI 125
                       +V +L+ +
Sbjct: 251 QQERARRPKFADIVSILDKL 270

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 8e-19
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIKP N+L+      KI+DFG +      +  T     GT  Y+ PE  +      
Sbjct: 127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL---CGTLDYLPPEMIEGRMHDE 183

Query: 62  KANVFNYGVVLLEI 75
           K ++++ GV+  E 
Sbjct: 184 KVDLWSLGVLCYEF 197

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 2e-18
 Identities = 19/74 (25%), Positives = 41/74 (55%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N L+++    K+SDFGL++ ++ D+  +    +    +  PE    +  S 
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180

Query: 62  KANVFNYGVVLLEI 75
           K++++ +GV++ EI
Sbjct: 181 KSDIWAFGVLMWEI 194

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 77.1 bits (189), Expect = 2e-18
 Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 14/138 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   N L+ E    K++DFGL++L+  D        +    + APE       S+
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195

Query: 62  KANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE--EVNKKTLENMIKVRLWC--- 116
           K++V+ +GV+L EI    ++      + + +  L  D   E  +   E + ++   C   
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 255

Query: 117 ---------SVVMMLEGI 125
                     +    E +
Sbjct: 256 NPSDRPSFAEIHQAFETM 273

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 2e-18
 Identities = 22/74 (29%), Positives = 43/74 (58%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH D+   N L+ E    K+SDFG+ + ++ DQ  + T  +    + +PE    +  S 
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181

Query: 62  KANVFNYGVVLLEI 75
           K++V+++GV++ E+
Sbjct: 182 KSDVWSFGVLMWEV 195

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.8 bits (186), Expect = 4e-18
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW---SKNTP 58
           +IH D+K  NIL+ E    K+ DFG A ++ P  +       GT  +MAPE         
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS-----FVGTPYWMAPEVILAMDEGQ 190

Query: 59  ISVKANVFNYGVVLLEI 75
              K +V++ G+  +E+
Sbjct: 191 YDGKVDVWSLGITCIEL 207

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 5e-18
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPIS 60
            +H D+   N+L+      KI DFGLA+ +M D         R    +MAPE       +
Sbjct: 185 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT 244

Query: 61  VKANVFNYGVVLLEI 75
           +K++V++YG++L EI
Sbjct: 245 IKSDVWSYGILLWEI 259

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 7e-18
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-----SKN 56
           IIH D+K  NIL       K++DFG++        R  + I GT  +MAPE      SK+
Sbjct: 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKD 189

Query: 57  TPISVKANVFNYGVVLLEI 75
            P   KA+V++ G+ L+E+
Sbjct: 190 RPYDYKADVWSLGITLIEM 208

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-17
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPIS 60
           ++H D+   N+L+      KI+DFGLAKLL  ++        +    +MA E   +   +
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 191

Query: 61  VKANVFNYGVVLLEI 75
            +++V++YGV + E+
Sbjct: 192 HQSDVWSYGVTVWEL 206

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.7 bits (180), Expect = 3e-17
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 15/139 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPIS 60
            +H D+   N L+ E    KI+DFGL++ +   D  +          +M PE       +
Sbjct: 161 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT 220

Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE--EVNKKTLENMIKVRLWC-- 116
            +++V+ YGVVL EI    +   Y    +     +         +     +  +   C  
Sbjct: 221 TESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWS 280

Query: 117 ----------SVVMMLEGI 125
                     S+  +L+ +
Sbjct: 281 KLPADRPSFCSIHRILQRM 299

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 3e-17
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPD-QTRTFTLIRGTRGYMAPEWSKNTPI- 59
           I H DIKP N+L+DE    KISDFGLA +   + + R    + GT  Y+APE  K     
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183

Query: 60  SVKANVFNYGVVLLEI 75
           +   +V++ G+VL  +
Sbjct: 184 AEPVDVWSCGIVLTAM 199

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 4e-17
 Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQ---TRTFTLIRGTRGYMAPEWSKNTP 58
            +H D+   N ++DE +T K++DFGLA+ +   +       T  +    +MA E  +   
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 210

Query: 59  ISVKANVFNYGVVLLEI 75
            + K++V+++GV+L E+
Sbjct: 211 FTTKSDVWSFGVLLWEL 227

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.9 bits (178), Expect = 5e-17
 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 18/142 (12%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT----RTFTLIRGTRGYMAPEWSKNT 57
            +H D+   NIL++     K+SDFGL++ L  D +     +    +    + APE  +  
Sbjct: 149 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 208

Query: 58  PISVKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE--EVNKKTLENMIKVRLW 115
             +  ++V++YG+V+ E+        +        N +  D            + ++ L 
Sbjct: 209 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLD 268

Query: 116 C------------SVVMMLEGI 125
           C             +V  L+ +
Sbjct: 269 CWQKDRNHRPKFGQIVNTLDKM 290

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 8e-17
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +IH DIK  NIL+    + K++DFG    + P+Q++  T++ GT  +MAPE         
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGP 195

Query: 62  KANVFNYGVVLLEI 75
           K ++++ G++ +E+
Sbjct: 196 KVDIWSLGIMAIEM 209

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 1e-16
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            IH D+   NIL+ E + AKI+DFGL++       +T    R    +MA E    +  + 
Sbjct: 148 FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG--RLPVRWMAIESLNYSVYTT 205

Query: 62  KANVFNYGVVLLEI 75
            ++V++YGV+L EI
Sbjct: 206 NSDVWSYGVLLWEI 219

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 2e-16
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTL---IRGTRGYMAPEW----- 53
           I H D+K  NIL+ +  T  I+D GLA                  GT+ YMAPE      
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 188

Query: 54  -SKNTPISVKANVFNYGVVLLEI 75
             K+     +A+++  G+V  EI
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEI 211

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 6e-16
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPIS 60
           IIH D+KP NIL++E    +I+DFG AK+L P+  +       GT  Y++PE        
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 188

Query: 61  VKANVFNYGVVLLEI 75
             ++++  G ++ ++
Sbjct: 189 KSSDLWALGCIIYQL 203

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 6e-16
 Identities = 19/74 (25%), Positives = 35/74 (47%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H DI   N+L+      K+ DFGL++ +        +  +    +MAPE       + 
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188

Query: 62  KANVFNYGVVLLEI 75
            ++V+ +GV + EI
Sbjct: 189 ASDVWMFGVCMWEI 202

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 6e-16
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D+   +  T  +    + APE       
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187

Query: 60  SVKANVFNYGVVLLEI 75
           S K++V+++GV++ E 
Sbjct: 188 SSKSDVWSFGVLMWEA 203

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 2e-15
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPI 59
            +H D+   N+L+     AKISDFGL+K L  D +     +  +    + APE       
Sbjct: 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 189

Query: 60  SVKANVFNYGVVLLEI 75
           S +++V++YGV + E 
Sbjct: 190 SSRSDVWSYGVTMWEA 205

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 3e-15
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
            +H D+   N+L+ E   AK+SDFGL K     Q            + APE  +    S 
Sbjct: 124 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK----LPVKWTAPEALREKKFST 179

Query: 62  KANVFNYGVVLLEI 75
           K++V+++G++L EI
Sbjct: 180 KSDVWSFGILLWEI 193

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 4e-15
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           I++ D+K  NIL+D+    KI+DFG+ K  M    +T T   GT  Y+APE       + 
Sbjct: 124 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAPEILLGQKYNH 182

Query: 62  KANVFNYGVVLLEI 75
             + +++GV+L E+
Sbjct: 183 SVDWWSFGVLLYEM 196

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 4e-15
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 16/144 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPIS 60
            IH D+   NIL+      KI DFGLA+ +  D         R    +MAPE   N   +
Sbjct: 166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT 225

Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE---EVNKKTLENMIKVRLWC- 116
            +++V++YG+ L E+  +  +      +D +F K++ +       +     M  +   C 
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW 285

Query: 117 -----------SVVMMLEGITDIS 129
                       +V ++E     S
Sbjct: 286 DADPLKRPTFKQIVQLIEKQISES 309

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.4 bits (164), Expect = 5e-15
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           II+ D+KP NIL+D+    KI+DFG AK +          + GT  Y+APE     P + 
Sbjct: 125 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT----LCGTPDYIAPEVVSTKPYNK 180

Query: 62  KANVFNYGVVLLEI 75
             + +++G+++ E+
Sbjct: 181 SIDWWSFGILIYEM 194

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (161), Expect = 1e-14
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 4/119 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF-TLIRGTRGYMAPEWSKNTPIS 60
            IH D+   NIL+ E    KI DFGLA+ +  D         R    +MAPE   +   +
Sbjct: 155 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT 214

Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE---EVNKKTLENMIKVRLWC 116
           ++++V+++GV+L EI  +  +      ID EF + + +         T   M +  L C
Sbjct: 215 IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 273

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.9 bits (160), Expect = 2e-14
 Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 2   IIHCDIKPHNILM--DEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
            +H D+KP NI+         K+ DFGL   L P Q+   T   GT  + APE ++  P+
Sbjct: 145 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPV 202

Query: 60  SVKANVFNYGVVLLEI 75
               ++++ GV+   +
Sbjct: 203 GYYTDMWSVGVLSYIL 218

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 3e-14
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +++ DIK  N+++D+    KI+DFGL K  + D     T   GT  Y+APE  ++     
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGR 184

Query: 62  KANVFNYGVVLLEI 75
             + +  GVV+ E+
Sbjct: 185 AVDWWGLGVVMYEM 198

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 6e-14
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP NIL+      K++DFGLA++       T   +  T  Y APE    +  + 
Sbjct: 137 VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS--VVVTLWYRAPEVLLQSSYAT 194

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 195 PVDLWSVGCIFAEM 208

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 2e-13
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTF--TLIRGTRGYMAPEWSKNTPI 59
            IH D+   N+L+      KI DFGL + L  +          +    + APE  K    
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191

Query: 60  SVKANVFNYGVVLLEI 75
           S  ++ + +GV L E+
Sbjct: 192 SHASDTWMFGVTLWEM 207

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 9e-13
 Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 17/142 (11%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMP-DQTRTFTLIRGTRGYMAPEWSKNTPIS 60
            +H D+   N ++ E +T KI DFG+ + +   D  R          +M+PE  K+   +
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213

Query: 61  VKANVFNYGVVLLEIEIVLINWAYKCFIDREFNKLVHDE---EVNKKTLENMIKVRLWC- 116
             ++V+++GVVL EI   L    Y+   + +  + V +    +      + + ++   C 
Sbjct: 214 TYSDVWSFGVVLWEI-ATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCW 272

Query: 117 -----------SVVMMLEGITD 127
                       ++  ++   +
Sbjct: 273 QYNPKMRPSFLEIISSIKEEME 294

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.9 bits (147), Expect = 1e-12
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPI 59
           IIH D+KP NI++      K+ DFG+A+ +            + GT  Y++PE ++   +
Sbjct: 132 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 191

Query: 60  SVKANVFNYGVVLLEI 75
             +++V++ G VL E+
Sbjct: 192 DARSDVYSLGCVLYEV 207

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 61.2 bits (148), Expect = 1e-12
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 2   IIHCDIKPHNILMDEF--WTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I+H DIKP NI+ +     + KI DFGLA  L PD+    T    T  + APE     P+
Sbjct: 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--TATAEFAAPEIVDREPV 205

Query: 60  SVKANVFNYGVVLLEI 75
               +++  GV+   +
Sbjct: 206 GFYTDMWAIGVLGYVL 221

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-12
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPE-WSKNTP 58
           ++H D+KP N+L++     KI DFGLA++  PD       T    TR Y APE    +  
Sbjct: 130 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 189

Query: 59  ISVKANVFNYGVVLLEI 75
            +   ++++ G +L E+
Sbjct: 190 YTKSIDIWSVGCILAEM 206

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW------SK 55
           I+H D+KP NIL+D+    K++DFG +  L P +      + GT  Y+APE         
Sbjct: 131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE--VCGTPSYLAPEIIECSMNDN 188

Query: 56  NTPISVKANVFNYGVVLLEI 75
           +     + ++++ GV++  +
Sbjct: 189 HPGYGKEVDMWSTGVIMYTL 208

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 2e-12
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW-SKNTPI 59
           ++H DIK  NIL+D      K+ DFG   LL       F    GTR Y  PEW   +   
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPEWIRYHRYH 187

Query: 60  SVKANVFNYGVVLLEI 75
              A V++ G++L ++
Sbjct: 188 GRSAAVWSLGILLYDM 203

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 60.5 bits (146), Expect = 2e-12
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           +++ D+KP NIL+DE    +ISD GLA      +        GT GYMAPE   K     
Sbjct: 128 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS---VGTHGYMAPEVLQKGVAYD 184

Query: 61  VKANVFNYGVVLLEI 75
             A+ F+ G +L ++
Sbjct: 185 SSADWFSLGCMLFKL 199

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 2   IIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI 59
           I H DI+P NI+       T KI +FG A+ L       F L+     Y APE  ++  +
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQL--KPGDNFRLLFTAPEYYAPEVHQHDVV 180

Query: 60  SVKANVFNYGVVLLEI 75
           S   ++++ G ++  +
Sbjct: 181 STATDMWSLGTLVYVL 196

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.7 bits (141), Expect = 8e-12
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 11/85 (12%)

Query: 2   IIHCDIKPHNILMDEFWT-----AKISDFGLAKLLMPDQTRTF------TLIRGTRGYMA 50
           +++ DIKP N L+    +       + DFG+ K      T+          + GT  YM+
Sbjct: 122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMS 181

Query: 51  PEWSKNTPISVKANVFNYGVVLLEI 75
                    S + ++   G V +  
Sbjct: 182 INTHLGREQSRRDDLEALGHVFMYF 206

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 8e-12
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 2   IIHCDIKPHNILMDEFW---TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I H D+KP N+L          K++DFG AK      + T      T  Y+APE      
Sbjct: 132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP--CYTPYYVAPEVLGPEK 189

Query: 59  ISVKANVFNYGVVLLEI 75
                ++++ GV++  +
Sbjct: 190 YDKSCDMWSLGVIMYIL 206

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 1e-11
 Identities = 15/74 (20%), Positives = 31/74 (41%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+L++     K++DFGLA+            +                 S 
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 182

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 183 AVDIWSLGCIFAEM 196

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 2e-11
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIR---GTRGYMAPEW-SKNT 57
           I+H D+K  N+L+      K++DFGLA+     +            T  Y  PE      
Sbjct: 138 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER 197

Query: 58  PISVKANVFNYGVVLLEI 75
                 +++  G ++ E+
Sbjct: 198 DYGPPIDLWGAGCIMAEM 215

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 2e-11
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPIS 60
           I+H D+KP+N+L+DE    K++DFGLAK         +T    TR Y APE         
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYG 179

Query: 61  VKANVFNYGVVLLEI 75
           V  +++  G +L E+
Sbjct: 180 VGVDMWAVGCILAEL 194

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.0 bits (137), Expect = 3e-11
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 2   IIHCDIKPHNIL---MDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP 58
           I+H D+KP N+L   +DE     ISDFGL+K+  P    +     GT GY+APE     P
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVLAQKP 185

Query: 59  ISVKANVFNYGVVLLEI 75
            S   + ++ GV+   +
Sbjct: 186 YSKAVDCWSIGVIAYIL 202

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 3e-11
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 2   IIHCDIKPHNILM---DEFWTAKISDFGLAKLLMPDQTRTF------TLIRGTRGYMAPE 52
            IH D+KP N LM    +     I DFGLAK     +T           + GT  Y +  
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183

Query: 53  WSKNTPISVKANVFNYGVVLLEI 75
                  S + ++ + G VL+  
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYF 206

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 5e-11
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 2   IIHCDIKPHNILMDEFWTA----KISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT 57
           I H D+KP NI++ +        KI DFGLA  +  D    F  I GT  ++APE     
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYE 191

Query: 58  PISVKANVFNYGVVLLEI 75
           P+ ++A++++ GV+   +
Sbjct: 192 PLGLEADMWSIGVITYIL 209

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.0 bits (134), Expect = 6e-11
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+L++     KI+DFGLA+       +    I             +   S 
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 181 TIDIWSVGCIFAEM 194

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 1e-10
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFT-LIRGTRGYMAPEWSKNTPIS 60
            IH D+   N+L+ E    KI+DFGLA+ +        T   R    +MAPE   +   +
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215

Query: 61  VKANVFNYGVVLLEI 75
            +++V+++GV+L EI
Sbjct: 216 HQSDVWSFGVLLWEI 230

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 1e-10
 Identities = 14/74 (18%), Positives = 31/74 (41%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           ++H D+KP N+L++     K+++FGLA+            +                 S 
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181

Query: 62  KANVFNYGVVLLEI 75
             ++++ G +  E+
Sbjct: 182 SIDMWSAGCIFAEL 195

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.7 bits (128), Expect = 5e-10
 Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           +I+ D+KP N+L+D+    +++DFG AK +          + GT   +APE   +   + 
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----LCGTPEALAPEIILSKGYNK 217

Query: 62  KANVFNYGVVLLEI 75
             + +  GV++ E+
Sbjct: 218 AVDWWALGVLIYEM 231

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (122), Expect = 3e-09
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISV 61
           IIH D+KP NI++    T KI DFGLA+        T      TR Y APE         
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY--VVTRYYRAPEVILGMGYKE 197

Query: 62  KANVFNYGVVLLEI 75
             ++++ G ++ E+
Sbjct: 198 NVDIWSVGCIMGEM 211

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 4e-09
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEW--SKNTPI 59
           II+ DIK  NIL+D      ++DFGL+K  + D+T       GT  YMAP+     ++  
Sbjct: 150 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 209

Query: 60  SVKANVFNYGVVLLEI 75
               + ++ GV++ E+
Sbjct: 210 DKAVDWWSLGVLMYEL 225

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 2   IIHCDIKP-HNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPIS 60
           I H DIKP + +L  +    K+ DFG AK L+  +    + I              T  +
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYT 201

Query: 61  VKANVFNYGVVLLEI 75
              +V++ G VL E+
Sbjct: 202 SSIDVWSAGCVLAEL 216

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.3 bits (116), Expect = 2e-08
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPI 59
           IIH DIKP N+LM+       +    +A L         +T    TR Y +PE     P 
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206

Query: 60  SVKANVFNYGVVLLEI 75
              A++++   ++ E+
Sbjct: 207 GCGADIWSTACLIFEL 222

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 48.7 bits (115), Expect = 3e-08
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 2   IIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPE-WSKNTPI 59
           I+H D+KPHN+++D E    ++ D+GLA+   P Q         +R +  PE        
Sbjct: 150 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV--RVASRYFKGPELLVDYQMY 207

Query: 60  SVKANVFNYGVVLLEI 75
               ++++ G +L  +
Sbjct: 208 DYSLDMWSLGCMLASM 223

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 2e-06
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 4   HCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVK 62
           H D+KP N+ ++E    KI DFGLA+    + T        TR Y APE   N    +  
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA----TRWYRAPEIMLNWMHYNQT 199

Query: 63  ANVFNYGVVLLEI 75
            ++++ G ++ E+
Sbjct: 200 VDIWSVGCIMAEL 212

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 1e-05
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 4   HCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVK 62
           H D+KP N+ ++E    KI DFGLA+    + T        TR Y APE   N    +  
Sbjct: 144 HRDLKPGNLAVNEDCELKILDFGLARQADSEMTG----YVVTRWYRAPEVILNWMRYTQT 199

Query: 63  ANVFNYGVVLLEI 75
            ++++ G ++ E+
Sbjct: 200 VDIWSVGCIMAEM 212

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 35.5 bits (81), Expect = 8e-04
 Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 1/28 (3%)

Query: 2   IIHCDIKPHNILMDEFWTAKISDFGLAK 29
           I+H D+  +N+L+ E     I DF  + 
Sbjct: 124 IVHGDLSQYNVLVSE-EGIWIIDFPQSV 150

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	137
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.92
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.91
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.91
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.91
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.91
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.91
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.91
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.91
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.9
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.9
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.9
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.89
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.89
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.89
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.89
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.89
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.89
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.88
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.88
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.88
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.88
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.88
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.88
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.87
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.87
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.87
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.87
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.87
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.86
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.86
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.86
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.85
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.85
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.85
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.84
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.84
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.84
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.82
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.82
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.81
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.81
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.81
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.8
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.8
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.8
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.79
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.78
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.76
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.74
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.71
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.71
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.48
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.89
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	94.36
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.95
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	90.48
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	86.41

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-27  Score=166.16  Aligned_cols=124  Identities=23%  Similarity=0.271  Sum_probs=91.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+||+|||+++..............|+..|+|||++.+..++.++|||||||++|||.++..
T Consensus       129 ~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~  208 (272)
T d1qpca_         129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR  208 (272)
T ss_dssp             TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTC
T ss_pred             CcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCC
Confidence            38999999999999999999999999999875444333344558889999999988889999999999999999999766


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      ||.......+.+..+...  ...+.....++.++..+|            +++++|+.
T Consensus       209 ~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~  266 (272)
T d1qpca_         209 IPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED  266 (272)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhh
Confidence            655443333333333333  122223334567777888            77777764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-27  Score=167.47  Aligned_cols=127  Identities=19%  Similarity=0.282  Sum_probs=88.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      .|+||||||+|||++.++.+||+|||+++........  ......||..|+|||++.+..++.++||||||+++|||.++
T Consensus       130 ~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~  209 (283)
T d1mqba_         130 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY  209 (283)
T ss_dssp             TCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhC
Confidence            3799999999999999999999999999876433222  12234578899999999998999999999999999999987


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      ..||.......+.+..+.+.  .+.+.....++.++..+|            +++++|+.+.+
T Consensus       210 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         210 GERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             SCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            76665544333333344333  233334456678888899            88888876544

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.5e-27  Score=164.72  Aligned_cols=125  Identities=27%  Similarity=0.405  Sum_probs=86.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCC---CCCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKN---TPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~---~~~~~~~dv~s~G~~l~el~   76 (137)
                      .|+||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+   ..++.++|||||||++|||.
T Consensus       124 ~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~  203 (276)
T d1uwha_         124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM  203 (276)
T ss_dssp             TCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHH
Confidence            489999999999999999999999999986543222 22334568999999999864   34788999999999999999


Q ss_pred             hcccchhhhhcchhhhhh----ccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           77 IVLINWAYKCFIDREFNK----LVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      +|..||............    ...+  ..........+.++..+|            +++++|+.+
T Consensus       204 tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l  270 (276)
T d1uwha_         204 TGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL  270 (276)
T ss_dssp             HSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            999999754322221111    1111  122333345667778888            888888765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2e-27  Score=164.79  Aligned_cols=125  Identities=20%  Similarity=0.231  Sum_probs=80.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+||+++.++.+||+|||+++..............||..|+|||++.+..++.++||||||+++|||.++..
T Consensus       121 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~  200 (263)
T d1sm2a_         121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK  200 (263)
T ss_dssp             TCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCC
Confidence            37999999999999999999999999998764433333334558999999999999999999999999999999998655


Q ss_pred             chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||.......+....+...  ...+.....++.++..+|            +++++|+.+
T Consensus       201 ~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i  259 (263)
T d1sm2a_         201 IPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI  259 (263)
T ss_dssp             CTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            544333222223333222  122223334567788888            888887754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=7.3e-27  Score=163.89  Aligned_cols=124  Identities=24%  Similarity=0.326  Sum_probs=91.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++..............|+..|+|||++.+..++.++||||||+++|||.++..|
T Consensus       136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p  215 (287)
T d1opja_         136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  215 (287)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCC
Confidence            79999999999999999999999999987654443333334578899999999988999999999999999999997776


Q ss_pred             hhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           82 WAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      |............+...  .+.+.....++.++..+|            ++.++|+..
T Consensus       216 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~  273 (287)
T d1opja_         216 PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM  273 (287)
T ss_dssp             SSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             CCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            65443322222222222  222233345567777888            888888765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-26  Score=162.05  Aligned_cols=126  Identities=20%  Similarity=0.269  Sum_probs=88.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++..............||+.|+|||++....++.++||||||+++|||.++..|
T Consensus       134 ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p  213 (285)
T d1fmka3         134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  213 (285)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCC
Confidence            79999999999999999999999999987644433333445689999999999988999999999999999999997766


Q ss_pred             hhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           82 WAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        82 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                      |.......+.+..+...  .+.+....+++.++..+|            +|+++|+....
T Consensus       214 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         214 PYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             SSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            65444333333333322  223333445677788888            88899987543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-26  Score=164.74  Aligned_cols=122  Identities=25%  Similarity=0.320  Sum_probs=89.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus       184 ~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g  263 (325)
T d1rjba_         184 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG  263 (325)
T ss_dssp             TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred             CeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCC
Confidence            3899999999999999999999999999876433332 2233457899999999998899999999999999999986 7


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHh
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLE  123 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~  123 (137)
                      ..||...... +.+..++..   .+.+.....++.++..+|            +++++|.
T Consensus       264 ~~Pf~~~~~~-~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         264 VNPYPGIPVD-ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CCSSTTCCCS-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCCCCCHH-HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            8999754332 223333322   122223334566777777            7777774

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=5.9e-26  Score=158.04  Aligned_cols=83  Identities=29%  Similarity=0.403  Sum_probs=69.5

Q ss_pred             CeEecCCCCCCEEeC-CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMD-EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~-~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      +|+||||||+||+++ .++.+||+|||+++.....   ......||+.|+|||++.+ .++.++||||+||++|||.+|.
T Consensus       134 ~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~  209 (270)
T d1t4ha_         134 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE  209 (270)
T ss_dssp             CCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred             CEEeCCcChhhceeeCCCCCEEEeecCcceeccCC---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCC
Confidence            489999999999996 5789999999999754322   2234569999999998865 5899999999999999999999


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .||.....
T Consensus       210 ~Pf~~~~~  217 (270)
T d1t4ha_         210 YPYSECQN  217 (270)
T ss_dssp             CTTTTCSS
T ss_pred             CCCCCccc
Confidence            99975443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.5e-27  Score=163.86  Aligned_cols=125  Identities=26%  Similarity=0.299  Sum_probs=83.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||.++.
T Consensus       154 ~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~  233 (299)
T d1ywna1         154 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  233 (299)
T ss_dssp             TCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCC
Confidence            3799999999999999999999999999865433322 223446899999999999888999999999999999998765


Q ss_pred             -cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 -INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                       .||......+.....+...  ...+.....++.++..+|            ++.++|+.+
T Consensus       234 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~i  294 (299)
T d1ywna1         234 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL  294 (299)
T ss_dssp             CCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence             5665433322222222222  122222334566777788            777777654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=1.2e-26  Score=163.54  Aligned_cols=125  Identities=20%  Similarity=0.226  Sum_probs=91.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||.++.
T Consensus       160 ~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~  239 (301)
T d1lufa_         160 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG  239 (301)
T ss_dssp             TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccC
Confidence            378999999999999999999999999986533222 2223445888999999999989999999999999999998886


Q ss_pred             -cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           80 -INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        80 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                       .||... ...+....+.+.  .+.+.....++.++..+|            +|+++|+.+.
T Consensus       240 ~~p~~~~-~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         240 LQPYYGM-AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             CCTTTTS-CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCC-CHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence             455533 223333444433  222333445677788888            9999998764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-25  Score=155.90  Aligned_cols=81  Identities=28%  Similarity=0.411  Sum_probs=71.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+|++|||+++......   .....||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       127 ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~P  203 (263)
T d2j4za1         127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP  203 (263)
T ss_dssp             CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCC---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             eeeeeeccccceecCCCCEeecccceeeecCCCc---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCC
Confidence            7999999999999999999999999997654322   2345699999999999998899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       204 f~~~  207 (263)
T d2j4za1         204 FEAN  207 (263)
T ss_dssp             TCCS
T ss_pred             CCCC
Confidence            9644

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.5e-26  Score=159.87  Aligned_cols=84  Identities=29%  Similarity=0.499  Sum_probs=63.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      +|+||||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||.+|..
T Consensus       134 ~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~  212 (269)
T d2java1         134 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP  212 (269)
T ss_dssp             ------CCGGGEEECTTSCEEECCHHHHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CEEeCcCchhhcCcCCCCcEEEeeccceeecccCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCC
Confidence            389999999999999999999999999987643322 2234569999999999998889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       213 Pf~~~  217 (269)
T d2java1         213 PFTAF  217 (269)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            99643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=3.6e-26  Score=161.13  Aligned_cols=125  Identities=22%  Similarity=0.286  Sum_probs=82.1

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce----eeecccccceecccccCCCCCCcccceeeHHHHHHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT----FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~   76 (137)
                      .|+||||||+|||++.++.+||+|||+++.........    .....||+.|+|||.+.+..++.++|||||||++|||.
T Consensus       148 ~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~  227 (299)
T d1jpaa_         148 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM  227 (299)
T ss_dssp             TCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHH
Confidence            37999999999999999999999999998764322211    11234788999999999888999999999999999998


Q ss_pred             h-cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           77 I-VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        77 ~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      + |..||..... .+....+...  .+.+......+.++..+|            ++++.|+.+.
T Consensus       228 t~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l  291 (299)
T d1jpaa_         228 SYGERPYWDMTN-QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI  291 (299)
T ss_dssp             TTSCCTTTTCCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            7 7889865432 2222333222  222333445667788888            8888887653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-25  Score=157.30  Aligned_cols=84  Identities=27%  Similarity=0.445  Sum_probs=73.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++||||+||++|+|.+|..|
T Consensus       137 iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~P  215 (293)
T d1yhwa1         137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP  215 (293)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CcccCCcHHHeEECCCCcEeeccchhheeecccccc-ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCC
Confidence            799999999999999999999999999876433322 2345699999999999998899999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       216 f~~~~  220 (293)
T d1yhwa1         216 YLNEN  220 (293)
T ss_dssp             TTTSC
T ss_pred             CCCCC
Confidence            97543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.7e-26  Score=157.26  Aligned_cols=86  Identities=36%  Similarity=0.524  Sum_probs=71.9

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++....... .......||+.|+|||++.+..+ +.++||||+||+++||.+|.
T Consensus       124 IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~  203 (271)
T d1nvra_         124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE  203 (271)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCC
Confidence            79999999999999999999999999987633222 22344569999999999987776 56799999999999999999


Q ss_pred             cchhhhhc
Q 042492           80 INWAYKCF   87 (137)
Q Consensus        80 ~~~~~~~~   87 (137)
                      .||.....
T Consensus       204 ~pf~~~~~  211 (271)
T d1nvra_         204 LPWDQPSD  211 (271)
T ss_dssp             CSCSSSST
T ss_pred             CCCCCCCh
Confidence            99975543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5e-25  Score=157.59  Aligned_cols=84  Identities=29%  Similarity=0.405  Sum_probs=73.0

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++....... .....+||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       126 iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~p  204 (337)
T d1o6la_         126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccCHHHeEecCCCCEEEeecccccccccCCc-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCC
Confidence            79999999999999999999999999986543222 23345699999999999999999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       205 f~~~~  209 (337)
T d1o6la_         205 FYNQD  209 (337)
T ss_dssp             SCCSS
T ss_pred             CCCcC
Confidence            97544

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-25  Score=156.63  Aligned_cols=84  Identities=30%  Similarity=0.510  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||+++.+..... .......||+.|+|||++.+..++.++||||+||++|||.+|..
T Consensus       129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~  208 (288)
T d1uu3a_         129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP  208 (288)
T ss_dssp             EECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             EEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCC
Confidence            89999999999999999999999999987643322 22334569999999999998889999999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       209 Pf~~~  213 (288)
T d1uu3a_         209 PFRAG  213 (288)
T ss_dssp             SSCCS
T ss_pred             CCCCc
Confidence            99754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.5e-25  Score=155.91  Aligned_cols=123  Identities=22%  Similarity=0.233  Sum_probs=91.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-   77 (137)
                      .|+||||||+||+++.++.+||+|||+++.........  .....||+.|+|||++.+..++.++|||||||++|||++ 
T Consensus       129 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~  208 (285)
T d1u59a_         129 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY  208 (285)
T ss_dssp             TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             CeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhC
Confidence            37999999999999999999999999999774433221  123457889999999988889999999999999999987 


Q ss_pred             cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           78 VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      |..||..... .+....+...  .+.+.....++.++..+|            ++.+.|+.
T Consensus       209 G~~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~  268 (285)
T d1u59a_         209 GQKPYKKMKG-PEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA  268 (285)
T ss_dssp             SCCTTTTCCT-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            8999975432 2222333332  223334445677888889            77777764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=5.6e-25  Score=156.07  Aligned_cols=80  Identities=31%  Similarity=0.488  Sum_probs=71.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++......    ....||+.|+|||++.+..++.++|+||+||++|+|.+|..|
T Consensus       125 iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~----~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~P  200 (316)
T d1fota_         125 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT----YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP  200 (316)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB----CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             EEccccCchheeEcCCCCEEEecCccceEecccc----ccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCC
Confidence            8999999999999999999999999998764322    245699999999999988899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       201 f~~~  204 (316)
T d1fota_         201 FYDS  204 (316)
T ss_dssp             TCCS
T ss_pred             CCCc
Confidence            9754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.8e-25  Score=155.06  Aligned_cols=123  Identities=24%  Similarity=0.236  Sum_probs=88.3

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-   77 (137)
                      .|+||||||+||+++.++.+|++|||+++.........  .....||+.|+|||.+.+..++.++||||||+++|||++ 
T Consensus       127 ~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~  206 (277)
T d1xbba_         127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY  206 (277)
T ss_dssp             TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTT
T ss_pred             CcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhC
Confidence            37999999999999999999999999998764433322  223458899999999988889999999999999999986 


Q ss_pred             cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           78 VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      |..||...... +....+...  .+.+.....++.++..+|            ++.++|+.
T Consensus       207 g~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         207 GQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             TCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            89999754321 222222222  222333345566777888            66666653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=7.7e-25  Score=157.31  Aligned_cols=80  Identities=25%  Similarity=0.344  Sum_probs=71.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       162 iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~P  237 (350)
T d1rdqe_         162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP  237 (350)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EecCcCCHHHcccCCCCCEEeeeceeeeecccc----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCC
Confidence            799999999999999999999999999876432    2234599999999999998899999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       238 f~~~  241 (350)
T d1rdqe_         238 FFAD  241 (350)
T ss_dssp             SCCS
T ss_pred             CCCc
Confidence            9654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.4e-25  Score=157.52  Aligned_cols=81  Identities=32%  Similarity=0.523  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+||+|||+++......   .....||+.|+|||++.+..++.++||||+||+++||.+|..|
T Consensus       126 IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~P  202 (322)
T d1s9ja_         126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP  202 (322)
T ss_dssp             CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCC
T ss_pred             EEccccCHHHeeECCCCCEEEeeCCCccccCCCc---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            8999999999999999999999999998653221   2345699999999999999999999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       203 f~~~  206 (322)
T d1s9ja_         203 IPPP  206 (322)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=5.1e-25  Score=153.24  Aligned_cols=123  Identities=17%  Similarity=0.226  Sum_probs=78.7

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .|+||||||+||+++.++.+|++|||+++..............||+.|+|||.+.+..++.++|||||||++|||++ |.
T Consensus       128 ~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~  207 (273)
T d1mp8a_         128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV  207 (273)
T ss_dssp             TCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             CeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCC
Confidence            37999999999999999999999999998764333333344558899999999998889999999999999999987 78


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhc
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEG  124 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~  124 (137)
                      .||..... .+.+..+...  .+.+.....++.++..+|            ++.+.|+.
T Consensus       208 ~P~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~  265 (273)
T d1mp8a_         208 KPFQGVKN-NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST  265 (273)
T ss_dssp             CTTTTCCG-GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            88865433 2223333332  122223334566677777            66666654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.5e-24  Score=151.88  Aligned_cols=125  Identities=24%  Similarity=0.236  Sum_probs=87.4

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCC------CCcccceeeHHHH
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTP------ISVKANVFNYGVV   71 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~------~~~~~dv~s~G~~   71 (137)
                      .|+||||||+||+++.++.+||+|||+++........   ......||+.|+|||++....      ++.++|||||||+
T Consensus       128 ~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvv  207 (303)
T d1vjya_         128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV  207 (303)
T ss_dssp             EEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred             CeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHH
Confidence            3799999999999999999999999999876433321   123456999999999886532      4678999999999


Q ss_pred             HHHHHhcccchhhhhcchhh-------------hh-hccC----C----ccccHHHHHHHHHHHHHh------------H
Q 042492           72 LLEIEIVLINWAYKCFIDRE-------------FN-KLVH----D----EEVNKKTLENMIKVRLWC------------S  117 (137)
Q Consensus        72 l~el~~~~~~~~~~~~~~~~-------------~~-~~~~----~----~~~~~~~~~~~~~~~l~C------------~  117 (137)
                      +|||.++..||......+..             .. ...+    +    .....+....+.++..+|            +
T Consensus       208 l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~e  287 (303)
T d1vjya_         208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR  287 (303)
T ss_dssp             HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred             HHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence            99999988776432211111             11 1111    1    112335667788899999            7


Q ss_pred             HHHHHhcC
Q 042492          118 VVMMLEGI  125 (137)
Q Consensus       118 v~~~L~~~  125 (137)
                      |.++|+.+
T Consensus       288 i~~~L~~i  295 (303)
T d1vjya_         288 IKKTLSQL  295 (303)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88888754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.1e-25  Score=154.93  Aligned_cols=125  Identities=22%  Similarity=0.249  Sum_probs=89.9

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc---eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR---TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      .|+||||||+|||++.++.+||+|||+++........   ......||..|+|||.+....++.++||||||+++|||++
T Consensus       150 ~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t  229 (311)
T d1r0pa_         150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT  229 (311)
T ss_dssp             TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHH
Confidence            3799999999999999999999999999876433221   1123458889999999998889999999999999999999


Q ss_pred             cccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           78 VLINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      +..||.......+....+...  ...+.....++.++..+|            +|++.|+++
T Consensus       230 ~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         230 RGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             TSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            887776544333333333332  122223345577788899            888888765

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.9e-24  Score=149.45  Aligned_cols=115  Identities=18%  Similarity=0.276  Sum_probs=86.2

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .|+||||||+||+++.++.+||+|||+++..............+|..|+|||.+.+..++.++||||||+++|||.+ |.
T Consensus       120 ~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~  199 (258)
T d1k2pa_         120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK  199 (258)
T ss_dssp             TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCC
Confidence            48999999999999999999999999998764443333344568899999999998889999999999999999987 78


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||..... .+-...+...  ...+......+.++..+|
T Consensus       200 ~Pf~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  237 (258)
T d1k2pa_         200 MPYERFTN-SETAEHIAQGLRLYRPHLASEKVYTIMYSC  237 (258)
T ss_dssp             CTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred             CCCCCCCH-HHHHHHHHhCCCCCCcccccHHHHHHHHHH
Confidence            89875442 2223333333  122223334567777788

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.2e-25  Score=155.79  Aligned_cols=114  Identities=21%  Similarity=0.209  Sum_probs=80.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++........ ......||..|+|||.+.+..++.++||||||+++|||.+ |.
T Consensus       132 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~  211 (317)
T d1xkka_         132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS  211 (317)
T ss_dssp             CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCC
Confidence            799999999999999999999999999876433322 2233458999999999998899999999999999999997 67


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC  116 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C  116 (137)
                      .||...... +....+..+  ...+.....++.++..+|
T Consensus       212 ~p~~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~c  249 (317)
T d1xkka_         212 KPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKC  249 (317)
T ss_dssp             CTTTTSCGG-GHHHHHHHTCCCCCCTTBCHHHHHHHHHH
T ss_pred             CCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHh
Confidence            888644322 111222111  122223345567778888

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.1e-24  Score=152.90  Aligned_cols=84  Identities=30%  Similarity=0.360  Sum_probs=69.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccC-----CCCCCcccceeeHHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSK-----NTPISVKANVFNYGVVLLEIE   76 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~-----~~~~~~~~dv~s~G~~l~el~   76 (137)
                      |+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.     ...++.++||||+||++|||.
T Consensus       131 ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyeml  209 (288)
T d2jfla1         131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA  209 (288)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHH
T ss_pred             EEEeecChhheeECCCCCEEEEechhhhccCCCc-ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHh
Confidence            7999999999999999999999999997642211 1122346999999999874     445788999999999999999


Q ss_pred             hcccchhhhh
Q 042492           77 IVLINWAYKC   86 (137)
Q Consensus        77 ~~~~~~~~~~   86 (137)
                      +|..||....
T Consensus       210 tg~~Pf~~~~  219 (288)
T d2jfla1         210 EIEPPHHELN  219 (288)
T ss_dssp             HSSCTTTTSC
T ss_pred             hCCCCCCCCC
Confidence            9999997543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.8e-24  Score=152.94  Aligned_cols=126  Identities=17%  Similarity=0.268  Sum_probs=93.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+|||++.++.+||+|||+++........ ......+++.|++||.+.+..++.++|+||||+++|||.++.
T Consensus       153 ~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~  232 (308)
T d1p4oa_         153 KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLA  232 (308)
T ss_dssp             TCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTS
T ss_pred             CeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCC
Confidence            4799999999999999999999999999865332221 122335789999999999888999999999999999999885


Q ss_pred             -cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCCC
Q 042492           80 -INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGITD  127 (137)
Q Consensus        80 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~~  127 (137)
                       .||.. ....+.+..+.+.  .+.+......+.++..+|            +|+++|+...+
T Consensus       233 ~~p~~~-~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         233 EQPYQG-LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CCTTTT-SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCCCCC-CCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             55643 3333444455444  222333345678888889            88888887643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=4.7e-24  Score=153.87  Aligned_cols=82  Identities=32%  Similarity=0.446  Sum_probs=70.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+|||++.++.+||+|||+++.......   ....||+.|+|||++.. ..++.++|+||+||++|||++|..
T Consensus       128 iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~---~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~  204 (364)
T d1omwa3         128 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS  204 (364)
T ss_dssp             EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccceeeccceeEEcCCCcEEEeeeceeeecCCCcc---cccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCC
Confidence            79999999999999999999999999987643322   23469999999999864 458899999999999999999999


Q ss_pred             chhhhh
Q 042492           81 NWAYKC   86 (137)
Q Consensus        81 ~~~~~~   86 (137)
                      ||....
T Consensus       205 Pf~~~~  210 (364)
T d1omwa3         205 PFRQHK  210 (364)
T ss_dssp             SSCSSC
T ss_pred             CCCCCC
Confidence            997544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.2e-24  Score=151.85  Aligned_cols=125  Identities=25%  Similarity=0.244  Sum_probs=92.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc-eeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR-TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      .|+||||||+|||++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |
T Consensus       155 ~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g  234 (299)
T d1fgka_         155 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG  234 (299)
T ss_dssp             TCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCC
Confidence            4799999999999999999999999999876433322 1233458889999999998999999999999999999987 6


Q ss_pred             ccchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcCC
Q 042492           79 LINWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGIT  126 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~~  126 (137)
                      ..||..... ++....+.+.  ...+.....++.++..+|            +|.++|+++.
T Consensus       235 ~~p~~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         235 GSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             CCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            777754332 2223333333  222223334577888889            8888888753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.88  E-value=3.5e-24  Score=151.56  Aligned_cols=80  Identities=30%  Similarity=0.385  Sum_probs=68.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC---CCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN---TPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~---~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.++.+||+|||+++.....     ....||+.|+|||++.+   ..++.++||||+||++|||.+|
T Consensus       136 iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g  210 (309)
T d1u5ra_         136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER  210 (309)
T ss_dssp             CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             EeccCCCcceEEECCCCCEEEeecccccccCCC-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHC
Confidence            799999999999999999999999999865322     23459999999999853   4578899999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       211 ~~Pf~~~~  218 (309)
T d1u5ra_         211 KPPLFNMN  218 (309)
T ss_dssp             SCTTTTSC
T ss_pred             CCCCCCCC
Confidence            99997543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.5e-24  Score=149.88  Aligned_cols=123  Identities=21%  Similarity=0.255  Sum_probs=88.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcce--eeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-c
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRT--FTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-V   78 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~   78 (137)
                      |+||||||+||+++.++.+|++|||+++.........  .....|+..|+|||.+.+..++.++||||||+++|||.+ |
T Consensus       132 iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G  211 (273)
T d1u46a_         132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG  211 (273)
T ss_dssp             EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTS
T ss_pred             EeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCC
Confidence            7999999999999999999999999999874443322  223347789999999998889999999999999999997 7


Q ss_pred             ccchhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           79 LINWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ..||...... +....+...   .+.+......+.++..+|            ++.++|+.+
T Consensus       212 ~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         212 QEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcCHH-HHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            9999754332 223333222   122223334566778888            788877653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=6.5e-24  Score=150.02  Aligned_cols=83  Identities=33%  Similarity=0.458  Sum_probs=60.1

Q ss_pred             eEecCCCCCCEEeC---CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMD---EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||++.   .++.+|++|||+++.......  .....||+.|+|||++.+..++.++|+||+||++|||.+|
T Consensus       128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~--~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g  205 (307)
T d1a06a_         128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG  205 (307)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCC--------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred             eeeEEecccceeecccCCCceEEEeccceeEEccCCCe--eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhC
Confidence            79999999999995   478899999999986533222  2345699999999999998899999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       206 ~~Pf~~~~  213 (307)
T d1a06a_         206 YPPFYDEN  213 (307)
T ss_dssp             SCSCCCSS
T ss_pred             CCCCCCCC
Confidence            99997543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.2e-24  Score=151.71  Aligned_cols=124  Identities=26%  Similarity=0.328  Sum_probs=91.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc-ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT-RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.++++|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||.++..
T Consensus       166 ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~  245 (311)
T d1t46a_         166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (311)
T ss_dssp             CCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCC
Confidence            78999999999999999999999999987644333 22334568999999999998889999999999999999998555


Q ss_pred             chhhhhcchhhhhhccCC---ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 NWAYKCFIDREFNKLVHD---EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      ||.......+.+..++..   ...+......+.++..+|            +++++|++.
T Consensus       246 p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             CSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            544343333344444322   222223345577778888            888888753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.4e-24  Score=150.44  Aligned_cols=122  Identities=25%  Similarity=0.303  Sum_probs=86.6

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhccc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      .|+||||||+|||++.++.+||+|||+++.......  .....||..|+|||.+.+..++.++||||||+++|||.++..
T Consensus       147 ~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~  224 (309)
T d1fvra_         147 QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG  224 (309)
T ss_dssp             TEECSCCSGGGEEECGGGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             CccccccccceEEEcCCCceEEcccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCC
Confidence            489999999999999999999999999986432211  223358899999999998889999999999999999998764


Q ss_pred             -chhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           81 -NWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        81 -~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                       ||.. ....+.+..+...  .+.+.....++.++..+|            ++++.|+..
T Consensus       225 ~p~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i  283 (309)
T d1fvra_         225 TPYCG-MTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM  283 (309)
T ss_dssp             CTTTT-CCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCC-CCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence             5643 2223333334333  222223344566777788            777776654

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.5e-23  Score=148.87  Aligned_cols=84  Identities=30%  Similarity=0.380  Sum_probs=72.5

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++.++.+|++|||+++....... ......||+.|+|||++.+..++.++|+||+||++|||.+|..|
T Consensus       124 iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~P  202 (320)
T d1xjda_         124 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP  202 (320)
T ss_dssp             CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeeccCcccceeecCCCceeccccchhhhcccccc-cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCC
Confidence            79999999999999999999999999986533222 23345699999999999999999999999999999999999999


Q ss_pred             hhhhh
Q 042492           82 WAYKC   86 (137)
Q Consensus        82 ~~~~~   86 (137)
                      |....
T Consensus       203 F~~~~  207 (320)
T d1xjda_         203 FHGQD  207 (320)
T ss_dssp             SCCSS
T ss_pred             CCCCC
Confidence            97543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.87  E-value=3.9e-23  Score=148.33  Aligned_cols=82  Identities=28%  Similarity=0.472  Sum_probs=70.6

Q ss_pred             eEecCCCCCCEEeC--CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++  .++.+||+|||+++.......  .....||+.|+|||++.+..++.++||||+||++++|.+|.
T Consensus       145 iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~--~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~  222 (350)
T d1koaa2         145 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL  222 (350)
T ss_dssp             EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSC--EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSS
T ss_pred             CeeeeechhHeeeccCCCCeEEEeecchheecccccc--cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCC
Confidence            79999999999996  467899999999987643322  33456999999999999888999999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       223 ~Pf~~~  228 (350)
T d1koaa2         223 SPFGGE  228 (350)
T ss_dssp             CSSCCS
T ss_pred             CCCCCC
Confidence            999644

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.87  E-value=2.3e-23  Score=149.63  Aligned_cols=83  Identities=33%  Similarity=0.486  Sum_probs=71.8

Q ss_pred             eEecCCCCCCEEeC--CCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMD--EFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+|||++  .++.+||+|||+++.......  .....||+.|+|||++.+..++.++||||+||++|+|++|.
T Consensus       148 iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~  225 (352)
T d1koba_         148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL  225 (352)
T ss_dssp             EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             eeecccccccccccccCCCeEEEeecccceecCCCCc--eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCC
Confidence            79999999999997  578999999999988744322  33456899999999999989999999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       226 ~Pf~~~~  232 (352)
T d1koba_         226 SPFAGED  232 (352)
T ss_dssp             CSSCCSS
T ss_pred             CCCCCCC
Confidence            9997543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-23  Score=144.55  Aligned_cols=120  Identities=23%  Similarity=0.293  Sum_probs=83.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh-cc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI-VL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~-~~   79 (137)
                      .|+||||||+||+++.++.+|++|||+++.....    .....++..|+|||++.+..++.++||||||+++|||.+ +.
T Consensus       123 ~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~  198 (262)
T d1byga_         123 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  198 (262)
T ss_dssp             TCCCSCCSGGGEEECTTSCEEECCCCC----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             ceeccccchHhheecCCCCEeecccccceecCCC----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCC
Confidence            4799999999999999999999999999865322    123347889999999988889999999999999999987 67


Q ss_pred             cchhhhhcchhhhhhccCC--ccccHHHHHHHHHHHHHh------------HHHHHHhcC
Q 042492           80 INWAYKCFIDREFNKLVHD--EEVNKKTLENMIKVRLWC------------SVVMMLEGI  125 (137)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~C------------~v~~~L~~~  125 (137)
                      .||..... .+....+...  .+.+.....++.++..+|            +++++|+.+
T Consensus       199 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         199 VPYPRIPL-KDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             CSCTTSCG-GGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            77764432 2223333322  223333334566777788            888888754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.1e-23  Score=145.86  Aligned_cols=82  Identities=26%  Similarity=0.349  Sum_probs=71.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+|||++..+.+|++|||+++....  ........||+.|+|||++.+..++.++|+||+||+++||.+|..|
T Consensus       137 ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~--~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~p  214 (305)
T d1blxa_         137 VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL  214 (305)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECSCCSCCCCCG--GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EEecCCCccEEEEcCCCCeeecchhhhhhhcc--cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCC
Confidence            79999999999999999999999999876432  2223445699999999999999999999999999999999999999


Q ss_pred             hhhh
Q 042492           82 WAYK   85 (137)
Q Consensus        82 ~~~~   85 (137)
                      |...
T Consensus       215 f~~~  218 (305)
T d1blxa_         215 FRGS  218 (305)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9644

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=3.2e-23  Score=144.28  Aligned_cols=85  Identities=27%  Similarity=0.499  Sum_probs=65.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc--ceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT--RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++..+++|||.++.......  .......||+.|+|||.+.+..++.++|+||+||+++||.+|.
T Consensus       132 iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~  211 (277)
T d1o6ya_         132 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE  211 (277)
T ss_dssp             EECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             ccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCC
Confidence            79999999999999999999999999876532222  2233456999999999999888999999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       212 ~Pf~~~~  218 (277)
T d1o6ya_         212 PPFTGDS  218 (277)
T ss_dssp             CSCCCSS
T ss_pred             CCCCCcC
Confidence            9997543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-22  Score=144.93  Aligned_cols=83  Identities=25%  Similarity=0.317  Sum_probs=71.0

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhc
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIV   78 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~   78 (137)
                      |+||||||+||+++.   .+.+|++|||+++.......  .....||+.|+|||++.+..++.++|+||+||++|+|.+|
T Consensus       132 iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg  209 (335)
T d2ozaa1         132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG  209 (335)
T ss_dssp             EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTS
T ss_pred             CccccccccccccccccccccccccccceeeeccCCCc--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhC
Confidence            799999999999985   46799999999987643322  2345699999999999988899999999999999999999


Q ss_pred             ccchhhhh
Q 042492           79 LINWAYKC   86 (137)
Q Consensus        79 ~~~~~~~~   86 (137)
                      ..||....
T Consensus       210 ~~Pf~~~~  217 (335)
T d2ozaa1         210 YPPFYSNH  217 (335)
T ss_dssp             SCSCEETT
T ss_pred             CCCCCCCC
Confidence            99997543

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=6.2e-23  Score=144.10  Aligned_cols=84  Identities=29%  Similarity=0.334  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCC---CCcEEEEecCCceecCCCCcc------eeeecccccceecccccCCCCCCcccceeeHHHHH
Q 042492            2 IIHCDIKPHNILMDE---FWTAKISDFGLAKLLMPDQTR------TFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVL   72 (137)
Q Consensus         2 iiHrdlk~~nill~~---~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l   72 (137)
                      |+||||||+||+++.   +..++++|||+++........      ......||+.|+|||.+.+..++.++|+|||||++
T Consensus       124 iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l  203 (299)
T d1ckia_         124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL  203 (299)
T ss_dssp             EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH
T ss_pred             eeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHH
Confidence            799999999999763   557999999999976433221      12345699999999999998899999999999999


Q ss_pred             HHHHhcccchhhh
Q 042492           73 LEIEIVLINWAYK   85 (137)
Q Consensus        73 ~el~~~~~~~~~~   85 (137)
                      +||.+|..||...
T Consensus       204 ~el~tg~~P~~~~  216 (299)
T d1ckia_         204 MYFNLGSLPWQGL  216 (299)
T ss_dssp             HHHHHSSCTTCCC
T ss_pred             HHHHhCCCccccc
Confidence            9999999999654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=2e-22  Score=141.38  Aligned_cols=84  Identities=24%  Similarity=0.299  Sum_probs=70.4

Q ss_pred             eEecCCCCCCEEeCC-----CCcEEEEecCCceecCCCCc------ceeeecccccceecccccCCCCCCcccceeeHHH
Q 042492            2 IIHCDIKPHNILMDE-----FWTAKISDFGLAKLLMPDQT------RTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGV   70 (137)
Q Consensus         2 iiHrdlk~~nill~~-----~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~   70 (137)
                      |+||||||+||+++.     .+.++++|||+++.......      .......||+.|+|||.+.+..++.++|+||+|+
T Consensus       122 iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~  201 (293)
T d1csna_         122 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH  201 (293)
T ss_dssp             EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             ceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhH
Confidence            799999999999974     56799999999987643221      1123456999999999999988999999999999


Q ss_pred             HHHHHHhcccchhhh
Q 042492           71 VLLEIEIVLINWAYK   85 (137)
Q Consensus        71 ~l~el~~~~~~~~~~   85 (137)
                      +++||.+|..||...
T Consensus       202 ~l~elltg~~Pf~~~  216 (293)
T d1csna_         202 VFMYFLRGSLPWQGL  216 (293)
T ss_dssp             HHHHHHHSSCTTSSC
T ss_pred             HHHHHHhCCCcCCCc
Confidence            999999999999744

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.1e-22  Score=142.79  Aligned_cols=83  Identities=33%  Similarity=0.430  Sum_probs=69.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+||+|||+++....... ......||+.|+|||.+... .++.++||||+||+++||.+|..
T Consensus       121 iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~  199 (299)
T d1ua2a_         121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVP  199 (299)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             eecccCCcceEEecCCCccccccCccccccCCCcc-cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcC
Confidence            79999999999999999999999999976543222 22334689999999988654 57899999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       200 pf~~~  204 (299)
T d1ua2a_         200 FLPGD  204 (299)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            98643

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.9e-22  Score=141.41  Aligned_cols=82  Identities=30%  Similarity=0.442  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCCCC----cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFW----TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++    .+|++|||+++.......  .....||+.|+|||++.+..++.++|+||+||++|||.+
T Consensus       134 ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~--~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~  211 (293)
T d1jksa_         134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS  211 (293)
T ss_dssp             EECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCB--CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             eeecccccceEEEecCCCcccceEecchhhhhhcCCCcc--ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHc
Confidence            79999999999998765    489999999987643322  234458999999999998889999999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       212 g~~Pf~~~  219 (293)
T d1jksa_         212 GASPFLGD  219 (293)
T ss_dssp             SSCSSCCS
T ss_pred             CCCCCCCC
Confidence            99999754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.5e-22  Score=140.74  Aligned_cols=81  Identities=33%  Similarity=0.504  Sum_probs=67.5

Q ss_pred             eEecCCCCCCEEeCC-CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCC-CcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE-FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPI-SVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~-~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~-~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++. ++.+|++|||+++......   .....||+.|+|||++.+..+ +.++|+||+||+++||.+|.
T Consensus       131 iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~---~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~  207 (273)
T d1xwsa_         131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD  207 (273)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             CccccCcccceEEecCCCeEEECccccceeccccc---ccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCC
Confidence            799999999999985 5789999999998653322   234569999999999876665 56789999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       208 ~Pf~~~  213 (273)
T d1xwsa_         208 IPFEHD  213 (273)
T ss_dssp             CSCCSH
T ss_pred             CCCCCc
Confidence            999653

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=4.2e-22  Score=141.46  Aligned_cols=85  Identities=29%  Similarity=0.380  Sum_probs=70.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC--CCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT--PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.++.+||+|||+++..............|++.|++||.+.+.  .++.++||||+||++++|.+|.
T Consensus       150 ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~  229 (322)
T d1vzoa_         150 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA  229 (322)
T ss_dssp             CCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS
T ss_pred             EEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCC
Confidence            79999999999999999999999999987644333333445689999999988654  3577899999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       230 ~PF~~~~  236 (322)
T d1vzoa_         230 SPFTVDG  236 (322)
T ss_dssp             CTTSCTT
T ss_pred             CCCCCCC
Confidence            9997654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.82  E-value=2.3e-21  Score=135.09  Aligned_cols=83  Identities=28%  Similarity=0.472  Sum_probs=69.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCC------CCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN------TPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~------~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++.++.+||+|||+++.......  .....||..|++||.+.+      ..++.++|+||+||++++|
T Consensus       131 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyem  208 (277)
T d1phka_         131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL  208 (277)
T ss_dssp             EECSCCSGGGEEECTTCCEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHH
T ss_pred             CcccccccceEEEcCCCCeEEccchheeEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhh
Confidence            79999999999999999999999999987643322  234568999999998752      3457889999999999999


Q ss_pred             Hhcccchhhhh
Q 042492           76 EIVLINWAYKC   86 (137)
Q Consensus        76 ~~~~~~~~~~~   86 (137)
                      .+|..||....
T Consensus       209 l~g~~Pf~~~~  219 (277)
T d1phka_         209 LAGSPPFWHRK  219 (277)
T ss_dssp             HHSSCSSCCSS
T ss_pred             ccCCCCCCCCC
Confidence            99999997554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3.8e-21  Score=135.89  Aligned_cols=83  Identities=23%  Similarity=0.257  Sum_probs=68.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCc---ceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHh
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQT---RTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~   77 (137)
                      |+||||||+||+++.++.+|++|||+++.......   .......||+.|+|||.+.+. .++.++|+||+||+++||.+
T Consensus       138 ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~  217 (318)
T d3blha1         138 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT  217 (318)
T ss_dssp             EECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             EEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhh
Confidence            79999999999999999999999999986543221   112234589999999988654 57899999999999999999


Q ss_pred             cccchhh
Q 042492           78 VLINWAY   84 (137)
Q Consensus        78 ~~~~~~~   84 (137)
                      |..||..
T Consensus       218 g~~pf~~  224 (318)
T d3blha1         218 RSPIMQG  224 (318)
T ss_dssp             SSCSCCC
T ss_pred             CCCCCCC
Confidence            9999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.4e-21  Score=137.13  Aligned_cols=85  Identities=32%  Similarity=0.448  Sum_probs=69.5

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcc--eeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHh
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTR--TFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEI   77 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~   77 (137)
                      .|+||||||+|||++.++.+||+|||+++........  ......|++.|+|||.+.. ..++.++|+||+||++++|.+
T Consensus       129 ~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~  208 (345)
T d1pmea_         129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS  208 (345)
T ss_dssp             TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhh
Confidence            3899999999999999999999999999875332221  1234558999999998854 456888999999999999999


Q ss_pred             cccchhhh
Q 042492           78 VLINWAYK   85 (137)
Q Consensus        78 ~~~~~~~~   85 (137)
                      |..||...
T Consensus       209 g~~pf~~~  216 (345)
T d1pmea_         209 NRPIFPGK  216 (345)
T ss_dssp             SSCSCCCS
T ss_pred             CCCCCCCC
Confidence            99999643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.4e-21  Score=137.29  Aligned_cols=82  Identities=27%  Similarity=0.369  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||.++....... ......||+.|+|||.+.... .+.++|+||+||++++|.+|..
T Consensus       123 IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~  201 (298)
T d1gz8a_         123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA  201 (298)
T ss_dssp             CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             EEccccCchheeecccCcceeccCCcceeccCCcc-cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCC
Confidence            79999999999999999999999999986643222 223346899999999876655 4788999999999999999999


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       202 Pf~~  205 (298)
T d1gz8a_         202 LFPG  205 (298)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9964

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.1e-20  Score=135.23  Aligned_cols=82  Identities=33%  Similarity=0.379  Sum_probs=68.0

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCC-CCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKN-TPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~-~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+|||++.++ .+||+|||+++.......  .....|+..|+|||.+.+ ..++.++||||+||+++||.+|.
T Consensus       143 IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~  220 (350)
T d1q5ka_         143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  220 (350)
T ss_dssp             EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTS
T ss_pred             CcccCCCcceEEEecCCCceeEecccchhhccCCcc--cccccccccccChHHhhcccCCCcceeecccceEEEehhhCC
Confidence            89999999999999764 899999999987643322  233468999999998764 46799999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       221 ~pf~~~  226 (350)
T d1q5ka_         221 PIFPGD  226 (350)
T ss_dssp             CSSCCS
T ss_pred             CCCCCC
Confidence            999644

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=3.1e-21  Score=134.55  Aligned_cols=83  Identities=25%  Similarity=0.334  Sum_probs=66.0

Q ss_pred             CeEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhcc
Q 042492            1 LIIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         1 ~iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      .|+||||||+||+++.++.+|++|||.+......... .....+++.|++||.+.+. .++.++|+||+||+++||.+|.
T Consensus       120 ~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~  198 (286)
T d1ob3a_         120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT  198 (286)
T ss_dssp             TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cEEecCCCCceeeEcCCCCEEecccccceecccCccc-cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCC
Confidence            3899999999999999999999999998876433222 2233588899999988654 4689999999999999999999


Q ss_pred             cchhh
Q 042492           80 INWAY   84 (137)
Q Consensus        80 ~~~~~   84 (137)
                      .||..
T Consensus       199 ~pf~~  203 (286)
T d1ob3a_         199 PLFPG  203 (286)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            99954

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.5e-21  Score=134.59  Aligned_cols=83  Identities=28%  Similarity=0.446  Sum_probs=70.1

Q ss_pred             eEecCCCCCCEEeCC--CCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDE--FWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+||+++.  ...+|++|||+++.......  .....+++.|++||...+..++.++|+||+||++|+|.+|.
T Consensus       123 iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~--~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~  200 (321)
T d1tkia_         123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI  200 (321)
T ss_dssp             EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccccccceeecCCCceEEEEcccchhhccccCCc--ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCC
Confidence            799999999999984  45789999999987643322  33345899999999999888999999999999999999999


Q ss_pred             cchhhhh
Q 042492           80 INWAYKC   86 (137)
Q Consensus        80 ~~~~~~~   86 (137)
                      .||....
T Consensus       201 ~Pf~~~~  207 (321)
T d1tkia_         201 NPFLAET  207 (321)
T ss_dssp             CTTCCSS
T ss_pred             CCCCCCC
Confidence            9997543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=2.1e-20  Score=133.53  Aligned_cols=80  Identities=31%  Similarity=0.351  Sum_probs=68.7

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCC-CCCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNT-PISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~-~~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+|||++.++.+|++|||+++......    +...||+.|+|||.+.+. .++.++|+||+||++++|.+|..
T Consensus       142 IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~  217 (346)
T d1cm8a_         142 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT  217 (346)
T ss_dssp             EECCCCCGGGEEECTTCCEEECCCTTCEECCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CcccccCcchhhcccccccccccccceeccCCcc----ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcC
Confidence            7999999999999999999999999998764322    344689999999988654 46889999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       218 pf~~~  222 (346)
T d1cm8a_         218 LFKGS  222 (346)
T ss_dssp             SSCCS
T ss_pred             CCCCC
Confidence            98643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.8e-20  Score=128.99  Aligned_cols=82  Identities=21%  Similarity=0.281  Sum_probs=67.4

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||.++........ .....++..|++||.+.... ++.++|+||+||+++||.+|..
T Consensus       122 IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~  200 (292)
T d1unla_         122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR  200 (292)
T ss_dssp             EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSC
T ss_pred             EeeecccCcccccccCCceeeeecchhhcccCCCcc-ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCC
Confidence            899999999999999999999999999876433222 22334678899999887655 5889999999999999999998


Q ss_pred             chhh
Q 042492           81 NWAY   84 (137)
Q Consensus        81 ~~~~   84 (137)
                      ||..
T Consensus       201 p~~~  204 (292)
T d1unla_         201 PLFP  204 (292)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            8743

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.76  E-value=8.6e-20  Score=129.37  Aligned_cols=82  Identities=23%  Similarity=0.442  Sum_probs=67.3

Q ss_pred             eEecCCCCCCEEeCCCC-cEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhcc
Q 042492            2 IIHCDIKPHNILMDEFW-TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVL   79 (137)
Q Consensus         2 iiHrdlk~~nill~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~   79 (137)
                      |+||||||+|||++.++ .+|++|||+++.......  .....+|..|+|||.+.+.. ++.++|+||+||+++++.+|.
T Consensus       150 IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~  227 (328)
T d3bqca1         150 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK  227 (328)
T ss_dssp             EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTC
T ss_pred             cccccccccceEEcCCCCeeeecccccceeccCCCc--ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCC
Confidence            79999999999998654 689999999987644332  23445899999999887654 688999999999999999999


Q ss_pred             cchhhh
Q 042492           80 INWAYK   85 (137)
Q Consensus        80 ~~~~~~   85 (137)
                      .||...
T Consensus       228 ~pf~~~  233 (328)
T d3bqca1         228 EPFFHG  233 (328)
T ss_dssp             SSSSCC
T ss_pred             CCCCCC
Confidence            988643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-19  Score=128.95  Aligned_cols=81  Identities=32%  Similarity=0.351  Sum_probs=62.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHHHhcccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEIEIVLIN   81 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el~~~~~~   81 (137)
                      |+||||||+||+++.++..+++|||+++.....  .......+|..|+|||.+.+..++.++|+||+||++++|.+|..|
T Consensus       140 iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~--~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~p  217 (355)
T d2b1pa1         140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL  217 (355)
T ss_dssp             CCCSCCCGGGEEECTTCCEEECCCCC-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccCCccccccccccceeeechhhhhccccc--cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCC
Confidence            799999999999999999999999998765332  223445689999999999988899999999999999999999999


Q ss_pred             hhh
Q 042492           82 WAY   84 (137)
Q Consensus        82 ~~~   84 (137)
                      |..
T Consensus       218 F~~  220 (355)
T d2b1pa1         218 FPG  220 (355)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=5.7e-19  Score=126.26  Aligned_cols=79  Identities=30%  Similarity=0.391  Sum_probs=65.7

Q ss_pred             eEecCCCCCCEEeCCCC------cEEEEecCCceecCCCCcceeeecccccceecccccCCCCCCcccceeeHHHHHHHH
Q 042492            2 IIHCDIKPHNILMDEFW------TAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTPISVKANVFNYGVVLLEI   75 (137)
Q Consensus         2 iiHrdlk~~nill~~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~dv~s~G~~l~el   75 (137)
                      |+||||||+||+++..+      .++++|||.+......    .....||+.|+|||.+....++.++|+||+||++++|
T Consensus       147 IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  222 (362)
T d1q8ya_         147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  222 (362)
T ss_dssp             EECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             cccccCChhHeeeeccCcccccceeeEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHH
Confidence            89999999999997543      3899999998865322    1234589999999999888899999999999999999


Q ss_pred             Hhcccchhh
Q 042492           76 EIVLINWAY   84 (137)
Q Consensus        76 ~~~~~~~~~   84 (137)
                      .+|..||..
T Consensus       223 ~~g~~pF~~  231 (362)
T d1q8ya_         223 ITGDFLFEP  231 (362)
T ss_dssp             HHSSCCC--
T ss_pred             HHCCCCCCC
Confidence            999999853

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.7e-19  Score=125.89  Aligned_cols=80  Identities=31%  Similarity=0.365  Sum_probs=63.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecCCCCcceeeecccccceecccccCCCC-CCcccceeeHHHHHHHHHhccc
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLMPDQTRTFTLIRGTRGYMAPEWSKNTP-ISVKANVFNYGVVLLEIEIVLI   80 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~-~~~~~dv~s~G~~l~el~~~~~   80 (137)
                      |+||||||+||+++.++.+|++|||++.....    ......|+..|+|||...+.. ++.++|+||+||++++|.+|..
T Consensus       142 iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~  217 (348)
T d2gfsa1         142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT  217 (348)
T ss_dssp             CCCCCCCGGGEEECTTCCEEECCC----CCTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             CcccccCCccccccccccccccccchhcccCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCC
Confidence            79999999999999999999999999865421    123345889999999876654 5789999999999999999999


Q ss_pred             chhhh
Q 042492           81 NWAYK   85 (137)
Q Consensus        81 ~~~~~   85 (137)
                      ||...
T Consensus       218 pF~~~  222 (348)
T d2gfsa1         218 LFPGT  222 (348)
T ss_dssp             SCCCS
T ss_pred             CCCCC
Confidence            98643

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.48  E-value=3.5e-08  Score=63.83  Aligned_cols=30  Identities=30%  Similarity=0.326  Sum_probs=26.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceecC
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLLM   32 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~~   32 (137)
                      |+|||+||+||+++.+ .++++|||.++...
T Consensus       124 iiHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         124 IVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             EECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             EEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence            7999999999999865 58899999997754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.89  E-value=0.0043  Score=41.91  Aligned_cols=28  Identities=25%  Similarity=0.286  Sum_probs=25.3

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      +||+|+.+.|++++.+....+.||+.+.
T Consensus       185 iIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         185 VIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCcchhhhhcccccceeEecccccc
Confidence            7999999999999988777999999764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.36  E-value=0.012  Score=38.41  Aligned_cols=29  Identities=21%  Similarity=0.263  Sum_probs=24.8

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      ++|+|+.+.|++++.++...+.||+.+..
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEeeccCcceeecCCceEEEeechhccc
Confidence            68999999999999877778999987653

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.95  E-value=0.011  Score=38.29  Aligned_cols=28  Identities=21%  Similarity=0.195  Sum_probs=24.2

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCce
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAK   29 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~   29 (137)
                      ++|+|+.+.||+++.+..+.++||+.+.
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            6899999999999887667899998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=90.48  E-value=0.09  Score=36.57  Aligned_cols=29  Identities=28%  Similarity=0.342  Sum_probs=24.6

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCceec
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKLL   31 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~~   31 (137)
                      ++|+|+.+.||+++.+ .+++.||..+...
T Consensus       225 LiHGDl~~gNIlv~~~-~~~vID~E~a~~G  253 (392)
T d2pula1         225 LIHGDLHTGSIFASEH-ETKVIDPEFAFYG  253 (392)
T ss_dssp             EECSCCCGGGEEECSS-CEEECCCTTCEEE
T ss_pred             eeccCCcCCceeEcCC-ceEEechhhcccC
Confidence            6899999999999876 4899999877653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=86.41  E-value=0.15  Score=34.30  Aligned_cols=27  Identities=26%  Similarity=0.240  Sum_probs=22.1

Q ss_pred             eEecCCCCCCEEeCCCCcEEEEecCCcee
Q 042492            2 IIHCDIKPHNILMDEFWTAKISDFGLAKL   30 (137)
Q Consensus         2 iiHrdlk~~nill~~~~~~kl~dfg~~~~   30 (137)
                      +||+|+.+.|++++.+  ..+.||+-+..
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhccc
Confidence            6899999999999753  45899987754