Query 042501
Match_columns 639
No_of_seqs 331 out of 1342
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 06:48:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042501.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042501hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14381 EDR1: Ethylene-respon 100.0 6.7E-71 1.5E-75 544.7 21.8 200 190-399 1-204 (204)
2 KOG0193 Serine/threonine prote 98.7 7.1E-09 1.5E-13 116.3 4.2 61 578-639 378-438 (678)
3 smart00460 TGc Transglutaminas 97.8 3.9E-05 8.5E-10 62.0 5.3 54 336-390 4-66 (68)
4 KOG0192 Tyrosine kinase specif 97.7 2.5E-05 5.5E-10 84.4 4.0 56 584-639 33-89 (362)
5 PF01841 Transglut_core: Trans 97.5 9.2E-05 2E-09 64.9 3.8 53 337-389 50-112 (113)
6 KOG1187 Serine/threonine prote 97.5 6.3E-05 1.4E-09 81.0 2.7 58 580-639 63-121 (361)
7 KOG0194 Protein tyrosine kinas 97.4 0.00015 3.2E-09 81.1 4.8 60 580-639 145-211 (474)
8 KOG0197 Tyrosine kinases [Sign 97.3 8.7E-05 1.9E-09 82.6 1.8 53 578-630 192-245 (468)
9 KOG2052 Activin A type IB rece 97.2 0.00015 3.3E-09 80.1 2.3 35 592-626 211-245 (513)
10 KOG0196 Tyrosine kinase, EPH ( 97.2 0.00022 4.7E-09 83.1 3.2 52 587-639 624-680 (996)
11 COG5279 CYK3 Uncharacterized p 97.2 0.00042 9E-09 77.4 5.1 56 337-393 208-270 (521)
12 cd05107 PTKc_PDGFR_beta Cataly 96.8 0.0011 2.3E-08 72.0 3.9 42 585-626 30-78 (401)
13 KOG4278 Protein tyrosine kinas 96.6 0.00094 2E-08 76.5 2.0 53 584-639 259-313 (1157)
14 cd05104 PTKc_Kit Catalytic dom 96.6 0.0018 3.8E-08 68.9 3.8 42 585-626 28-76 (375)
15 KOG0199 ACK and related non-re 96.5 0.0011 2.4E-08 76.8 1.4 54 585-639 103-161 (1039)
16 PLN03224 probable serine/threo 96.4 0.0044 9.4E-08 70.1 5.7 39 588-626 141-197 (507)
17 cd05105 PTKc_PDGFR_alpha Catal 96.3 0.004 8.6E-08 67.5 4.6 53 585-638 30-89 (400)
18 KOG1026 Nerve growth factor re 96.3 0.00084 1.8E-08 78.6 -0.7 55 584-639 478-539 (774)
19 KOG3653 Transforming growth fa 96.2 0.0026 5.6E-08 71.1 2.3 36 591-626 209-244 (534)
20 PTZ00283 serine/threonine prot 95.9 0.012 2.6E-07 65.7 6.3 52 585-636 25-78 (496)
21 KOG4257 Focal adhesion tyrosin 95.9 0.0046 1E-07 71.2 2.7 54 585-639 382-441 (974)
22 cd05106 PTKc_CSF-1R Catalytic 95.9 0.0072 1.6E-07 64.4 4.0 43 584-626 30-79 (374)
23 KOG1095 Protein tyrosine kinas 95.9 0.0067 1.5E-07 73.3 4.1 51 588-639 688-745 (1025)
24 KOG1025 Epidermal growth facto 95.8 0.0062 1.3E-07 71.9 3.4 34 593-626 697-736 (1177)
25 KOG1094 Discoidin domain recep 95.8 0.0066 1.4E-07 69.5 3.5 52 587-639 533-585 (807)
26 PRK09188 serine/threonine prot 95.6 0.021 4.6E-07 62.2 6.3 43 583-625 9-54 (365)
27 cd05098 PTKc_FGFR1 Catalytic d 95.3 0.017 3.7E-07 58.7 4.3 43 584-626 10-61 (307)
28 PTZ00284 protein kinase; Provi 95.3 0.019 4.1E-07 62.9 4.8 41 585-625 122-164 (467)
29 PLN00034 mitogen-activated pro 95.3 0.026 5.7E-07 59.0 5.6 39 588-626 70-110 (353)
30 cd06618 PKc_MKK7 Catalytic dom 95.2 0.028 6E-07 56.8 5.1 45 582-626 5-51 (296)
31 cd06638 STKc_myosinIIIA Cataly 94.8 0.034 7.4E-07 55.3 4.6 45 582-626 8-54 (286)
32 cd07878 STKc_p38beta_MAPK11 Ca 94.8 0.03 6.6E-07 58.0 4.3 41 585-626 9-51 (343)
33 KOG0200 Fibroblast/platelet-de 94.8 0.027 5.9E-07 64.8 4.2 55 582-638 287-350 (609)
34 PHA02988 hypothetical protein; 94.7 0.034 7.4E-07 56.5 4.2 40 587-626 13-54 (283)
35 KOG4236 Serine/threonine prote 94.6 0.017 3.8E-07 65.6 2.2 37 593-629 565-603 (888)
36 PTZ00263 protein kinase A cata 94.6 0.029 6.3E-07 58.2 3.5 36 591-626 17-54 (329)
37 KOG4721 Serine/threonine prote 94.5 0.012 2.6E-07 67.4 0.5 42 585-626 117-158 (904)
38 cd07876 STKc_JNK2 Catalytic do 94.4 0.046 1E-06 57.2 4.7 36 591-626 20-57 (359)
39 cd05101 PTKc_FGFR2 Catalytic d 94.3 0.045 9.7E-07 55.5 4.0 42 585-626 8-58 (304)
40 KOG0201 Serine/threonine prote 94.1 0.041 8.9E-07 61.3 3.5 34 593-626 14-49 (467)
41 cd07875 STKc_JNK1 Catalytic do 94.1 0.06 1.3E-06 56.5 4.6 36 591-626 23-60 (364)
42 cd05055 PTKc_PDGFR Catalytic d 94.0 0.05 1.1E-06 55.6 3.7 42 585-626 28-76 (302)
43 COG1305 Transglutaminase-like 93.9 0.25 5.5E-06 50.0 8.5 105 265-391 141-259 (319)
44 cd05596 STKc_ROCK Catalytic do 93.8 0.047 1E-06 58.0 3.3 41 585-625 36-78 (370)
45 cd07874 STKc_JNK3 Catalytic do 93.7 0.08 1.7E-06 55.3 4.6 36 591-626 16-53 (355)
46 cd05622 STKc_ROCK1 Catalytic d 93.6 0.063 1.4E-06 57.2 3.8 41 585-625 36-78 (371)
47 PTZ00036 glycogen synthase kin 93.3 0.082 1.8E-06 58.0 4.2 38 589-626 63-102 (440)
48 cd07879 STKc_p38delta_MAPK13 C 93.3 0.083 1.8E-06 55.1 4.1 40 585-625 9-50 (342)
49 PTZ00426 cAMP-dependent protei 93.3 0.079 1.7E-06 55.8 3.8 39 587-625 25-66 (340)
50 KOG0605 NDR and related serine 93.2 0.067 1.5E-06 60.8 3.4 41 588-628 137-179 (550)
51 PLN03225 Serine/threonine-prot 93.0 0.1 2.2E-06 59.7 4.5 38 588-625 128-171 (566)
52 cd06636 STKc_MAP4K4_6 Catalyti 92.9 0.13 2.8E-06 51.2 4.7 42 585-626 9-52 (282)
53 cd07877 STKc_p38alpha_MAPK14 C 92.7 0.14 2.9E-06 53.6 4.7 37 590-626 15-53 (345)
54 KOG0658 Glycogen synthase kina 92.7 0.11 2.4E-06 56.6 4.0 34 593-626 25-60 (364)
55 cd05621 STKc_ROCK2 Catalytic d 92.7 0.096 2.1E-06 55.9 3.5 40 586-625 37-78 (370)
56 cd07880 STKc_p38gamma_MAPK12 C 92.5 0.16 3.6E-06 53.0 4.9 38 587-625 11-50 (343)
57 KOG0591 NIMA (never in mitosis 92.4 0.034 7.3E-07 59.5 -0.4 49 590-638 17-67 (375)
58 cd06607 STKc_TAO Catalytic dom 92.3 0.21 4.6E-06 50.8 5.2 35 591-625 14-50 (307)
59 PTZ00266 NIMA-related protein 91.9 0.23 5E-06 60.8 5.8 53 585-637 6-60 (1021)
60 cd07851 STKc_p38 Catalytic dom 91.5 0.24 5.2E-06 51.7 4.7 41 585-626 9-51 (343)
61 cd07850 STKc_JNK Catalytic dom 91.3 0.26 5.7E-06 51.5 4.8 34 592-625 16-51 (353)
62 cd06639 STKc_myosinIIIB Cataly 91.2 0.41 9E-06 48.0 5.9 44 583-626 13-58 (291)
63 cd06635 STKc_TAO1 Catalytic do 91.0 0.28 6.1E-06 50.4 4.6 35 591-625 24-60 (317)
64 cd06656 STKc_PAK3 Catalytic do 90.8 0.27 5.8E-06 50.1 4.2 35 592-626 19-55 (297)
65 cd06647 STKc_PAK_I Catalytic d 90.6 0.31 6.6E-06 49.5 4.4 36 591-626 18-55 (293)
66 cd05144 RIO2_C RIO kinase fami 90.5 0.26 5.5E-06 47.8 3.6 32 594-625 17-49 (198)
67 KOG0574 STE20-like serine/thre 90.5 0.036 7.9E-07 59.6 -2.5 35 592-626 33-69 (502)
68 cd06654 STKc_PAK1 Catalytic do 90.4 0.33 7.2E-06 49.4 4.5 35 592-626 20-56 (296)
69 KOG0694 Serine/threonine prote 90.4 0.25 5.4E-06 57.7 3.9 41 587-627 363-405 (694)
70 KOG0580 Serine/threonine prote 90.4 0.2 4.2E-06 52.7 2.7 36 591-626 21-58 (281)
71 KOG1035 eIF-2alpha kinase GCN2 90.1 0.11 2.4E-06 63.8 0.8 36 591-626 478-515 (1351)
72 KOG0663 Protein kinase PITSLRE 90.1 0.16 3.4E-06 55.5 1.8 36 591-626 75-112 (419)
73 cd06655 STKc_PAK2 Catalytic do 89.8 0.32 6.9E-06 49.6 3.8 37 590-626 17-55 (296)
74 smart00090 RIO RIO-like kinase 89.8 0.29 6.3E-06 49.9 3.4 34 593-626 29-65 (237)
75 KOG0600 Cdc2-related protein k 89.7 0.13 2.7E-06 58.4 0.8 37 590-626 115-153 (560)
76 KOG0667 Dual-specificity tyros 89.7 0.28 6.1E-06 56.7 3.6 34 593-626 187-222 (586)
77 KOG1006 Mitogen-activated prot 89.5 0.14 3.1E-06 54.5 1.0 44 585-628 57-102 (361)
78 cd06658 STKc_PAK5 Catalytic do 89.0 0.39 8.5E-06 48.8 3.7 34 593-626 23-58 (292)
79 TIGR01982 UbiB 2-polyprenylphe 88.7 0.46 9.9E-06 52.9 4.2 30 597-626 122-152 (437)
80 KOG1163 Casein kinase (serine/ 88.5 0.36 7.7E-06 51.1 3.0 37 589-625 12-50 (341)
81 cd06659 STKc_PAK6 Catalytic do 88.4 0.37 8.1E-06 49.1 3.1 34 593-626 22-57 (297)
82 PF03109 ABC1: ABC1 family; I 88.4 0.16 3.5E-06 46.8 0.4 34 592-626 12-46 (119)
83 KOG1165 Casein kinase (serine/ 88.0 0.5 1.1E-05 51.9 3.8 48 589-636 25-74 (449)
84 cd06614 STKc_PAK Catalytic dom 88.0 0.59 1.3E-05 46.8 4.2 37 590-626 17-55 (286)
85 cd06657 STKc_PAK4 Catalytic do 87.8 0.6 1.3E-05 47.6 4.1 30 597-626 25-56 (292)
86 cd06633 STKc_TAO3 Catalytic do 87.6 0.81 1.7E-05 47.0 5.0 30 596-625 25-56 (313)
87 PHA03209 serine/threonine kina 87.6 0.6 1.3E-05 49.3 4.2 36 591-626 65-102 (357)
88 PLN00113 leucine-rich repeat r 87.6 0.56 1.2E-05 56.0 4.4 35 592-626 690-726 (968)
89 KOG0581 Mitogen-activated prot 86.9 0.64 1.4E-05 51.0 3.9 50 588-638 75-126 (364)
90 cd06648 STKc_PAK_II Catalytic 86.7 0.9 1.9E-05 45.9 4.7 34 593-626 20-55 (285)
91 KOG4250 TANK binding protein k 86.6 0.28 6E-06 57.6 1.0 32 595-626 16-49 (732)
92 KOG0582 Ste20-like serine/thre 86.6 0.74 1.6E-05 51.9 4.3 43 584-626 18-62 (516)
93 cd06634 STKc_TAO2 Catalytic do 86.5 0.67 1.5E-05 47.4 3.6 35 591-625 14-50 (308)
94 KOG1989 ARK protein kinase fam 86.4 1.1 2.4E-05 53.3 5.7 54 581-636 26-81 (738)
95 PHA03212 serine/threonine kina 85.9 0.84 1.8E-05 49.4 4.2 38 589-626 89-128 (391)
96 KOG0575 Polo-like serine/threo 85.8 0.73 1.6E-05 53.3 3.8 34 592-625 18-53 (592)
97 KOG0583 Serine/threonine prote 85.6 0.86 1.9E-05 49.8 4.1 38 589-626 14-53 (370)
98 PHA03207 serine/threonine kina 84.5 2.3 5E-05 45.6 6.7 37 590-626 90-130 (392)
99 KOG0983 Mitogen-activated prot 84.3 2.2 4.7E-05 46.1 6.2 44 584-627 84-129 (391)
100 PRK04750 ubiB putative ubiquin 83.8 1 2.3E-05 51.7 3.9 35 591-626 119-155 (537)
101 KOG0032 Ca2+/calmodulin-depend 83.6 0.97 2.1E-05 49.7 3.5 35 592-626 35-71 (382)
102 KOG0598 Ribosomal protein S6 k 82.8 0.69 1.5E-05 50.6 1.9 39 588-626 21-61 (357)
103 KOG0592 3-phosphoinositide-dep 82.6 0.62 1.3E-05 53.5 1.5 36 590-625 71-108 (604)
104 KOG0615 Serine/threonine prote 82.2 1.3 2.8E-05 49.6 3.7 35 592-626 172-208 (475)
105 KOG0198 MEKK and related serin 81.5 1.3 2.9E-05 47.6 3.5 36 591-626 16-53 (313)
106 KOG1166 Mitotic checkpoint ser 80.7 1.3 2.8E-05 54.2 3.3 43 584-626 690-733 (974)
107 PF04473 DUF553: Transglutamin 79.9 3.7 8.1E-05 40.1 5.6 107 283-390 13-126 (153)
108 PRK09605 bifunctional UGMP fam 79.1 2.7 5.9E-05 47.6 5.1 29 595-623 336-364 (535)
109 KOG0612 Rho-associated, coiled 79.0 0.35 7.6E-06 59.4 -2.0 42 586-627 69-112 (1317)
110 KOG1024 Receptor-like protein 78.9 0.45 9.8E-06 53.1 -1.1 55 584-639 276-337 (563)
111 PHA03211 serine/threonine kina 78.7 2 4.4E-05 48.1 3.9 35 591-625 168-204 (461)
112 KOG0586 Serine/threonine prote 78.1 2.4 5.2E-05 49.3 4.2 42 591-632 55-98 (596)
113 KOG0660 Mitogen-activated prot 77.9 1.6 3.5E-05 47.8 2.7 40 585-625 16-57 (359)
114 KOG0577 Serine/threonine prote 77.6 1.5 3.3E-05 51.2 2.5 32 594-625 28-61 (948)
115 PHA03210 serine/threonine kina 76.4 1.1 2.4E-05 50.2 1.0 24 591-614 147-170 (501)
116 KOG0585 Ca2+/calmodulin-depend 75.5 2.4 5.3E-05 48.4 3.3 39 588-626 93-133 (576)
117 PTZ00267 NIMA-related protein 75.0 3.4 7.3E-05 45.9 4.3 34 593-626 68-104 (478)
118 KOG0984 Mitogen-activated prot 72.6 2.8 6E-05 43.8 2.6 48 585-632 39-88 (282)
119 KOG0195 Integrin-linked kinase 72.4 0.83 1.8E-05 49.1 -1.2 52 588-639 186-237 (448)
120 COG2112 Predicted Ser/Thr prot 71.6 4.5 9.7E-05 41.3 3.8 41 587-627 17-57 (201)
121 PF00797 Acetyltransf_2: N-ace 70.6 5.9 0.00013 39.9 4.5 53 338-391 46-105 (240)
122 KOG0587 Traf2- and Nck-interac 70.5 5.6 0.00012 48.3 4.9 43 584-626 11-55 (953)
123 KOG1164 Casein kinase (serine/ 69.2 4.5 9.7E-05 42.6 3.4 33 593-625 19-54 (322)
124 KOG0696 Serine/threonine prote 68.7 4.6 0.0001 45.7 3.5 38 588-625 345-384 (683)
125 KOG0616 cAMP-dependent protein 67.9 3.9 8.4E-05 44.5 2.6 37 591-627 43-81 (355)
126 KOG0576 Mitogen-activated prot 67.6 1.7 3.6E-05 51.3 -0.1 38 589-626 12-51 (829)
127 PF13369 Transglut_core2: Tran 67.5 43 0.00094 32.0 9.5 110 267-398 6-115 (152)
128 PHA03390 pk1 serine/threonine- 67.5 6.2 0.00013 39.5 3.9 27 600-626 24-52 (267)
129 KOG0611 Predicted serine/threo 66.4 2 4.3E-05 48.4 0.2 35 593-627 54-90 (668)
130 COG0661 AarF Predicted unusual 65.8 3.5 7.5E-05 47.4 1.9 29 598-626 131-160 (517)
131 KOG2345 Serine/threonine prote 64.1 4.4 9.6E-05 43.2 2.1 42 585-626 14-57 (302)
132 KOG4258 Insulin/growth factor 58.1 3.2 7E-05 50.0 -0.1 33 582-615 985-1017(1025)
133 KOG1027 Serine/threonine prote 56.2 4.4 9.6E-05 48.8 0.6 36 592-627 509-545 (903)
134 PRK10359 lipopolysaccharide co 54.7 16 0.00035 37.9 4.4 36 591-626 30-65 (232)
135 KOG1345 Serine/threonine kinas 53.8 8.6 0.00019 41.7 2.2 45 592-639 24-70 (378)
136 KOG0690 Serine/threonine prote 53.2 7.4 0.00016 43.0 1.7 40 587-626 163-204 (516)
137 KOG1152 Signal transduction se 52.3 12 0.00027 43.9 3.3 41 586-626 552-597 (772)
138 KOG0579 Ste20-like serine/thre 50.4 2.6 5.5E-05 49.8 -2.4 41 597-639 37-79 (1187)
139 KOG4717 Serine/threonine prote 49.7 6.9 0.00015 45.5 0.8 36 593-628 19-56 (864)
140 KOG0986 G protein-coupled rece 46.8 4.6 0.0001 46.1 -1.1 38 587-624 180-219 (591)
141 KOG0670 U4/U6-associated splic 45.7 16 0.00035 42.6 2.9 28 599-626 439-468 (752)
142 KOG0666 Cyclin C-dependent kin 45.1 9.1 0.0002 42.1 0.8 35 592-626 24-64 (438)
143 PRK10941 hypothetical protein; 44.5 2.3E+02 0.0049 30.2 11.0 110 267-402 37-151 (269)
144 KOG1167 Serine/threonine prote 44.3 6.5 0.00014 44.1 -0.5 35 592-626 36-75 (418)
145 KOG0578 p21-activated serine/t 43.9 14 0.0003 42.9 2.0 36 591-626 272-309 (550)
146 PF02809 UIM: Ubiquitin intera 43.0 22 0.00048 23.2 2.0 14 149-162 2-15 (18)
147 KOG0668 Casein kinase II, alph 42.9 7.1 0.00015 41.4 -0.4 45 582-626 25-74 (338)
148 KOG0695 Serine/threonine prote 40.5 8.3 0.00018 42.7 -0.3 43 585-627 243-287 (593)
149 KOG0596 Dual specificity; seri 40.4 14 0.0003 43.2 1.4 53 587-639 356-409 (677)
150 KOG4279 Serine/threonine prote 40.3 21 0.00045 43.1 2.7 40 587-626 570-611 (1226)
151 KOG1235 Predicted unusual prot 37.9 24 0.00051 41.1 2.7 30 597-626 166-196 (538)
152 KOG0610 Putative serine/threon 37.1 25 0.00054 39.9 2.6 41 587-627 72-114 (459)
153 PF13095 FTA2: Kinetochore Sim 36.3 43 0.00093 34.5 4.0 33 592-624 37-70 (207)
154 PRK15047 N-hydroxyarylamine O- 36.2 57 0.0012 34.8 5.1 53 337-390 65-123 (281)
155 KOG0669 Cyclin T-dependent kin 36.2 1.8 4E-05 46.2 -5.9 35 589-623 14-50 (376)
156 KOG0671 LAMMER dual specificit 36.2 12 0.00026 41.8 0.1 35 591-625 88-124 (415)
157 KOG0664 Nemo-like MAPK-related 29.1 27 0.00058 38.1 1.2 33 593-625 54-88 (449)
158 KOG1290 Serine/threonine prote 28.2 61 0.0013 37.7 3.9 35 592-626 78-114 (590)
159 KOG1151 Tousled-like protein k 26.1 12 0.00026 42.8 -2.0 34 592-625 463-498 (775)
160 KOG0584 Serine/threonine prote 24.3 18 0.00038 42.7 -1.2 27 593-619 41-69 (632)
161 PRK04031 DNA primase; Provisio 22.4 2.3E+02 0.0049 32.3 6.8 106 240-349 87-209 (408)
No 1
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1
Probab=100.00 E-value=6.7e-71 Score=544.73 Aligned_cols=200 Identities=57% Similarity=1.007 Sum_probs=188.5
Q ss_pred CCHHHHHHHHHhcCcccCCCCCCCcceeeeccCcccccccc-cC-CCCCCCCCHhhhhcCCCCCCCcccEEEEcCCCChh
Q 042501 190 SSPEAISHRFWVNGCLSYFDKVPDGFYLIHGVNPYVWTVCT-DM-NENGRIPSIESLRSVDPSSDSLIEVVLIDRRSDPS 267 (639)
Q Consensus 190 ~~~e~lS~ryW~~g~L~y~DkI~DGFYdI~g~dp~~w~~~~-~~-~e~~riPsLe~L~a~~~~~~~~~EVILVDr~~D~~ 267 (639)
+++|++|+|||++|||+|+||||||||||+|++ |+ ++ .+++|||||++|+++++. ++++|||||||..|+.
T Consensus 1 ~~~e~lS~r~W~~~~L~y~dki~DGFYdi~g~~------~~~~l~~~~~~~Psl~~L~~~~~~-~~~~EvIlVDr~~D~~ 73 (204)
T PF14381_consen 1 SSAESLSHRYWVNGCLSYDDKIPDGFYDIYGMD------CTNSLKEEFGRMPSLEDLQAVPPD-DSSREVILVDRRRDPS 73 (204)
T ss_pred CcHHHHHHHHHHcCCCCCCCcCCCCCcccccCC------CccccccccCCCCCHHHHhcCCCC-CCCeeEEEEccccCHH
Confidence 478999999999999999999999999999996 74 66 579999999999999854 9999999999999999
Q ss_pred HHHHHHHHHHHhhcCC-CHHHHHHHHHHHHHhhcCCCCCCCCCcchhhHHHhHHHHHhhhCCeEEEeeccccccchhhHH
Q 042501 268 LKELQNRVVNISCTCI-TTQEVVDQLAKLVCNRMGGSATTGEDDFVPIWRECSDDIKDCLGSVVVPIGSLSIGLCRHRTL 346 (639)
Q Consensus 268 L~~L~~~a~~l~~~~~-~~~~~v~~LA~lVad~MGG~v~~~~~~l~~~wk~~~~~LK~~l~S~ViPIG~L~~GlcRHRAL 346 (639)
|++|+++|+++++++. ++++++++||+|||++|||++.. ++....+|++++.+||. +++++|||+|++|+||||||
T Consensus 74 L~~L~~~a~~~~~~~~~~~~~~v~~LA~lVa~~MGG~~~~-~~~~~~~w~~~s~~lk~--~s~~vplG~l~~G~~rhRAL 150 (204)
T PF14381_consen 74 LKELEQRAHELSKGLSTNTKELVQKLAKLVADRMGGPVSD-AEDMLFRWELRSEKLKE--NSGVVPLGSLRIGLCRHRAL 150 (204)
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCCCCc-chhhhHHHHHHHHHHHh--CCCeEEEeeecccchHHHHH
Confidence 9999999999999988 69999999999999999999984 44445699999888998 89999999999999999999
Q ss_pred HHHHHhhhcCCCceEecccccCCC-CCCcceeEEeCCCeEEEEeCCCCCCcccC
Q 042501 347 LFKVLADAIDLPCRIAKGCKYCKR-EDASSCLVRFGLDREYLVDLIGKPGHLCV 399 (639)
Q Consensus 347 LFKvLAD~IgLPCrLVRG~~Y~~~-dd~a~~~Vk~~~~reyiVDLM~~PG~L~~ 399 (639)
|||||||+||||||||||++||++ ++++||+|++++++|||||||++||+|+|
T Consensus 151 LFKvLAD~iglpCrLvrG~~y~g~~~~~a~~~V~~~~~~eyiVDLm~~PG~L~P 204 (204)
T PF14381_consen 151 LFKVLADRIGLPCRLVRGCYYCGWDDDDASNLVKFDDGREYIVDLMGAPGQLIP 204 (204)
T ss_pred HHHHHHHhcCCCceEEeeccCCccCCCCceEEEEcCCCcEEEEEcCCCCCCcCC
Confidence 999999999999999999999999 89999999999999999999999999997
No 2
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=98.72 E-value=7.1e-09 Score=116.32 Aligned_cols=61 Identities=39% Similarity=0.733 Sum_probs=54.9
Q ss_pred CCccCCcccccccccCccccceecCCCceEEEEEEECCceEEEEEeccccccHHHHHHHhcC
Q 042501 578 KEFTFDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 578 ~~~~~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
...+.+..+|+|+.+++.+.++||+|+||+||||.|+| +||||+|+....+.++.+.|++|
T Consensus 378 r~~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnE 438 (678)
T KOG0193|consen 378 RQASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNE 438 (678)
T ss_pred ccCCccccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHH
Confidence 33455668999999999999999999999999999998 79999999988888899999887
No 3
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=97.79 E-value=3.9e-05 Score=62.00 Aligned_cols=54 Identities=22% Similarity=0.261 Sum_probs=44.6
Q ss_pred cccccchhhHHHHHHHhhhcCCCceEecccccC---------CCCCCcceeEEeCCCeEEEEeC
Q 042501 336 LSIGLCRHRTLLFKVLADAIDLPCRIAKGCKYC---------KREDASSCLVRFGLDREYLVDL 390 (639)
Q Consensus 336 L~~GlcRHRALLFKvLAD~IgLPCrLVRG~~Y~---------~~dd~a~~~Vk~~~~reyiVDL 390 (639)
-+.|.|.+.|.||+.|+-.+|||||+|.|.... ....++|+.|.++ +++|.+|.
T Consensus 4 ~~~G~C~~~a~l~~~llr~~GIpar~v~g~~~~~~~~~~~~~~~~~H~W~ev~~~-~~W~~~D~ 66 (68)
T smart00460 4 TKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLRSIWEAHAWAEVYLE-GGWVPVDP 66 (68)
T ss_pred ccceeeHHHHHHHHHHHHHCCCCeEEEeeeecCCCCCcccccCCCcEEEEEEEEC-CCeEEEeC
Confidence 367999999999999999999999999994222 1345678888885 78999995
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.71 E-value=2.5e-05 Score=84.39 Aligned_cols=56 Identities=43% Similarity=0.758 Sum_probs=48.4
Q ss_pred cccccccccCccccceecCCCceEEEEEEECCce-EEEEEeccccccHHHHHHHhcC
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWHGSD-VAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wrGt~-VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
..+|+|.+.++.+.+.||+|+||+||+|.|+|+. ||||++...+.+....++|.+|
T Consensus 33 ~~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E 89 (362)
T KOG0192|consen 33 LPEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRRE 89 (362)
T ss_pred ccceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHH
Confidence 4679999999999999999999999999999998 9999999876554446677665
No 5
>PF01841 Transglut_core: Transglutaminase-like superfamily; InterPro: IPR002931 This domain is found in many proteins known to have transglutaminase activity, i.e. which cross-link proteins through an acyl-transfer reaction between the gamma-carboxamide group of peptide-bound glutamine and the epsilon-amino group of peptide-bound lysine, resulting in a epsilon-(gamma-glutamyl)lysine isopeptide bond. Tranglutaminases have been found in a diverse range of species, from bacteria through to mammals. The enzymes require calcium binding and their activity leads to post-translational modification of proteins through acyl-transfer reactions, involving peptidyl glutamine residues as acyl donors and a variety of primary amines as acyl acceptors, with the generation of proteinase resistant isopeptide bonds []. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterised transglutaminase, the human blood clotting factor XIIIa' []. On the basis of the experimentally demonstrated activity of the Methanobacterium phage psiM2 pseudomurein endoisopeptidase [], it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease []. A subunit of plasma Factor XIII revealed that each Factor XIIIA subunit is composed of four domains (termed N-terminal beta-sandwich, core domain (containing the catalytic and the regulatory sites), and C-terminal beta-barrels 1 and 2) and that two monomers assemble into the native dimer through the surfaces in domains 1 and 2, in opposite orientation. This organisation in four domains is highly conserved during evolution among transglutaminase isoforms [].; PDB: 2F4M_A 2F4O_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B ....
Probab=97.50 E-value=9.2e-05 Score=64.93 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=42.3
Q ss_pred ccccchhhHHHHHHHhhhcCCCceEecccccCC----------CCCCcceeEEeCCCeEEEEe
Q 042501 337 SIGLCRHRTLLFKVLADAIDLPCRIAKGCKYCK----------REDASSCLVRFGLDREYLVD 389 (639)
Q Consensus 337 ~~GlcRHRALLFKvLAD~IgLPCrLVRG~~Y~~----------~dd~a~~~Vk~~~~reyiVD 389 (639)
+.|.|.+.|.||..|+-.+|||||+|.|..... .+.++||.|.+++++++.+|
T Consensus 50 ~~G~C~~~a~l~~allr~~Gipar~v~g~~~~~~~~~~~~~~~~~~H~w~ev~~~~~~W~~~D 112 (113)
T PF01841_consen 50 GRGDCEDYASLFVALLRALGIPARVVSGYVKGPDPDGDYSVDGNDNHAWVEVYLPGGGWIPLD 112 (113)
T ss_dssp EEESHHHHHHHHHHHHHHHT--EEEEEEEEEECSSTTCTSTSSEEEEEEEEEEETTTEEEEEE
T ss_pred CCCccHHHHHHHHHHHhhCCCceEEEEEEcCCccccccccCCCCCCEEEEEEEEcCCcEEEcC
Confidence 459999999999999999999999999943211 12478999999888899998
No 6
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.45 E-value=6.3e-05 Score=81.04 Aligned_cols=58 Identities=36% Similarity=0.445 Sum_probs=47.9
Q ss_pred ccCCcccccccccCccccceecCCCceEEEEEEEC-CceEEEEEeccccccHHHHHHHhcC
Q 042501 580 FTFDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH-GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 580 ~~~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
..|+..++..+|++|...++||+|+||+||||.+. |+.||||++...... + .++|.+|
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~-~-~~eF~~E 121 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ-G-EREFLNE 121 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc-c-hhHHHHH
Confidence 35788999999999999999999999999999998 589999998775321 1 3457665
No 7
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.40 E-value=0.00015 Score=81.13 Aligned_cols=60 Identities=32% Similarity=0.542 Sum_probs=50.2
Q ss_pred ccCCcccccccccCccccceecCCCceEEEEEEEC---C---ceEEEEEeccc-cccHHHHHHHhcC
Q 042501 580 FTFDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH---G---SDVAVKILMEQ-EFHAERFKEFLRE 639 (639)
Q Consensus 580 ~~~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr---G---t~VAVK~Lk~~-d~s~q~~~eFl~E 639 (639)
.++....|++..+++.+.++||+|+||+||+|.++ + ..||||+.+.. ....+++.+|++|
T Consensus 145 ~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~E 211 (474)
T KOG0194|consen 145 RPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKE 211 (474)
T ss_pred ccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHH
Confidence 45667889999999999999999999999999987 2 23899999863 2467788899876
No 8
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.32 E-value=8.7e-05 Score=82.62 Aligned_cols=53 Identities=34% Similarity=0.614 Sum_probs=46.0
Q ss_pred CCccCCcccccccccCccccceecCCCceEEEEEEECCc-eEEEEEeccccccH
Q 042501 578 KEFTFDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWHGS-DVAVKILMEQEFHA 630 (639)
Q Consensus 578 ~~~~~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wrGt-~VAVK~Lk~~d~s~ 630 (639)
....+..+.|+|+.+++.+.+.||+|.||+||.|.|++. +||||.++...++.
T Consensus 192 ~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~ 245 (468)
T KOG0197|consen 192 QTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSP 245 (468)
T ss_pred CCCccccCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccCh
Confidence 334455789999999999999999999999999999976 99999999875544
No 9
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.22 E-value=0.00015 Score=80.09 Aligned_cols=35 Identities=49% Similarity=0.884 Sum_probs=32.1
Q ss_pred cCccccceecCCCceEEEEEEECCceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~ 626 (639)
..+.+.+.||+|.||+||||.|+|..||||++...
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr 245 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR 245 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEeccc
Confidence 47888999999999999999999999999999654
No 10
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.19 E-value=0.00022 Score=83.14 Aligned_cols=52 Identities=31% Similarity=0.498 Sum_probs=46.3
Q ss_pred ccccccCccccceecCCCceEEEEEEEC--C---ceEEEEEeccccccHHHHHHHhcC
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH--G---SDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr--G---t~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
-||+.+.+.++++||.|.||+|++|.++ | ..||||.|+.. +++.++.+|+.|
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~E 680 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSE 680 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhh
Confidence 3788899999999999999999999997 3 68999999987 578888999876
No 11
>COG5279 CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning]
Probab=97.18 E-value=0.00042 Score=77.40 Aligned_cols=56 Identities=29% Similarity=0.489 Sum_probs=45.6
Q ss_pred ccccchhhHHHHHHHhhhcCCCceEeccc-----ccCCC--CCCcceeEEeCCCeEEEEeCCCC
Q 042501 337 SIGLCRHRTLLFKVLADAIDLPCRIAKGC-----KYCKR--EDASSCLVRFGLDREYLVDLIGK 393 (639)
Q Consensus 337 ~~GlcRHRALLFKvLAD~IgLPCrLVRG~-----~Y~~~--dd~a~~~Vk~~~~reyiVDLM~~ 393 (639)
.-++|-..|.|||.||-.+||||.+|+|. .|+.- =.++||+|++++ ..|+||..-.
T Consensus 208 heavCtgYa~lfK~lcn~lgIp~~iIegf~k~~~~~~~~~~iNHaWN~VkiD~-~yy~VDtTwg 270 (521)
T COG5279 208 HEAVCTGYAELFKELCNALGIPCEIIEGFLKSPIYYTRDININHAWNIVKIDN-EYYLVDTTWG 270 (521)
T ss_pred cccccchHHHHHHHHHHhcCCceEEEeecccccccccCCccccceeeEEEECC-eEEEEeeecC
Confidence 45789999999999999999999999994 11111 157999999966 7999998764
No 12
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.77 E-value=0.0011 Score=71.98 Aligned_cols=42 Identities=40% Similarity=0.695 Sum_probs=37.6
Q ss_pred ccccccccCccccceecCCCceEEEEEEECC-------ceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWHG-------SDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wrG-------t~VAVK~Lk~~ 626 (639)
.+|+++.+++.+.++||+|+||.||+|.+++ ..||||+++..
T Consensus 30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~ 78 (401)
T cd05107 30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST 78 (401)
T ss_pred CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC
Confidence 4599999999999999999999999999863 47999999764
No 13
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=96.60 E-value=0.00094 Score=76.54 Aligned_cols=53 Identities=36% Similarity=0.685 Sum_probs=46.3
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHHhcC
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
.++||..+.+|..+++||-|.||+||.|.|+ ...||||.|+...+ .+++|++|
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM---eveEFLkE 313 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKE 313 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch---hHHHHHHH
Confidence 4889999999999999999999999999998 56899999998743 45678765
No 14
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.58 E-value=0.0018 Score=68.88 Aligned_cols=42 Identities=36% Similarity=0.529 Sum_probs=36.8
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC-------CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH-------GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr-------Gt~VAVK~Lk~~ 626 (639)
..|.++.+++.+.++||+|+||+||+|.+. +..||||+++..
T Consensus 28 ~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~ 76 (375)
T cd05104 28 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPS 76 (375)
T ss_pred cccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCC
Confidence 569999999999999999999999999863 358999999754
No 15
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=96.46 E-value=0.0011 Score=76.82 Aligned_cols=54 Identities=41% Similarity=0.666 Sum_probs=44.9
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC---C--ceEEEEEeccccccHHHHHHHhcC
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH---G--SDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr---G--t~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
....|+.+.+.+.++||+|+||.||||.|. | ..||||.|+....+. ...+|++|
T Consensus 103 lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrE 161 (1039)
T KOG0199|consen 103 LKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLRE 161 (1039)
T ss_pred cceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHH
Confidence 456799999999999999999999999997 3 589999999875443 45678776
No 16
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.40 E-value=0.0044 Score=70.14 Aligned_cols=39 Identities=23% Similarity=0.379 Sum_probs=32.5
Q ss_pred cccccCccccceecCCCceEEEEEEE------------------CCceEEEEEeccc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADW------------------HGSDVAVKILMEQ 626 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~w------------------rGt~VAVK~Lk~~ 626 (639)
....++|.+.++||+|+||+||+|.+ .+..||||+++..
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~ 197 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMD 197 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEeccc
Confidence 34588999999999999999999975 1467999998754
No 17
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.31 E-value=0.004 Score=67.54 Aligned_cols=53 Identities=28% Similarity=0.481 Sum_probs=40.8
Q ss_pred ccccccccCccccceecCCCceEEEEEEECC-------ceEEEEEeccccccHHHHHHHhc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWHG-------SDVAVKILMEQEFHAERFKEFLR 638 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wrG-------t~VAVK~Lk~~d~s~q~~~eFl~ 638 (639)
..|+++.+.+.+.++||+|+||+||+|.+.+ ..||||+++... .....+.|++
T Consensus 30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~ 89 (400)
T cd05105 30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMS 89 (400)
T ss_pred CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHH
Confidence 5699999999999999999999999998752 369999997542 2333344544
No 18
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.29 E-value=0.00084 Score=78.56 Aligned_cols=55 Identities=38% Similarity=0.597 Sum_probs=46.8
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC-------CceEEEEEeccccccHHHHHHHhcC
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH-------GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr-------Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
....+|++.++...+.||+|.||+||+|... .+.||||.|+... +.++.++|.+|
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-~~~~~~dF~RE 539 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-ENQARQDFRRE 539 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-cHHHHHHHHHH
Confidence 3557899999999999999999999999976 2689999999874 45577899876
No 19
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=96.18 E-value=0.0026 Score=71.05 Aligned_cols=36 Identities=47% Similarity=0.565 Sum_probs=32.1
Q ss_pred ccCccccceecCCCceEEEEEEECCceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~ 626 (639)
...+.+.+.||+|.||.||||.++++.||||++...
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~ 244 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ 244 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCHH
Confidence 456778889999999999999999999999999654
No 20
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.95 E-value=0.012 Score=65.68 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=39.5
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHH
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEF 636 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eF 636 (639)
+........+.+.++||+|+||+||++... |..||||++.....+......+
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~ 78 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRA 78 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHH
Confidence 445556678899999999999999999875 7899999987654444433333
No 21
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=95.89 E-value=0.0046 Score=71.20 Aligned_cols=54 Identities=30% Similarity=0.459 Sum_probs=45.1
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC----C--ceEEEEEeccccccHHHHHHHhcC
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH----G--SDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr----G--t~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
.++++.++.+.++++||+|.||.||+|.|. | ..||||+.+... ..+..+.|++|
T Consensus 382 rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqE 441 (974)
T KOG4257|consen 382 RNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQE 441 (974)
T ss_pred CcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHH
Confidence 568999999999999999999999999986 3 479999998854 34556788765
No 22
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=95.89 E-value=0.0072 Score=64.35 Aligned_cols=43 Identities=33% Similarity=0.503 Sum_probs=37.2
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC-------CceEEEEEeccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH-------GSDVAVKILMEQ 626 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr-------Gt~VAVK~Lk~~ 626 (639)
...|.++.++|.+.+.||+|+||.||++.+. +..||||+++..
T Consensus 30 ~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~ 79 (374)
T cd05106 30 NEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS 79 (374)
T ss_pred cccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC
Confidence 3569999999999999999999999999874 247999999764
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=95.87 E-value=0.0067 Score=73.33 Aligned_cols=51 Identities=31% Similarity=0.611 Sum_probs=42.9
Q ss_pred cccccCccccceecCCCceEEEEEEEC---C----ceEEEEEeccccccHHHHHHHhcC
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH---G----SDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr---G----t~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
++++..+++.+.||+|.||.||+|.+. | ..||||.++... +.+.+.+|++|
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~Fl~E 745 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDFLKE 745 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHHHHH
Confidence 467899999999999999999999987 3 248999998763 57778899876
No 24
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=95.83 E-value=0.0062 Score=71.93 Aligned_cols=34 Identities=38% Similarity=0.655 Sum_probs=29.0
Q ss_pred CccccceecCCCceEEEEEEEC------CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH------GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr------Gt~VAVK~Lk~~ 626 (639)
++...++||+|+||+||||.|- ..+||||++...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~ 736 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF 736 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc
Confidence 5666779999999999999995 469999999764
No 25
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=95.81 E-value=0.0066 Score=69.49 Aligned_cols=52 Identities=42% Similarity=0.685 Sum_probs=44.5
Q ss_pred ccccccCccccceecCCCceEEEEEEECC-ceEEEEEeccccccHHHHHHHhcC
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWHG-SDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wrG-t~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
-++|++.+.++++||+|.||+|+.+...| ..||||+++..+ +...+.+|.+|
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-~~~~r~~F~kE 585 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-TKNARNDFLKE 585 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-chhHHHHHHHH
Confidence 47899999999999999999999999885 899999999874 34556778765
No 26
>PRK09188 serine/threonine protein kinase; Provisional
Probab=95.61 E-value=0.021 Score=62.22 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=33.7
Q ss_pred CcccccccccCccccceecCCCceEEEEEEEC---CceEEEEEecc
Q 042501 583 DVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH---GSDVAVKILME 625 (639)
Q Consensus 583 s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr---Gt~VAVK~Lk~ 625 (639)
..+...+-...+.+.++||+|+||+||+|.++ +..||||++..
T Consensus 9 ~~~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~ 54 (365)
T PRK09188 9 PGDQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVS 54 (365)
T ss_pred cccccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecc
Confidence 33444445667899999999999999999875 67789998753
No 27
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.34 E-value=0.017 Score=58.69 Aligned_cols=43 Identities=37% Similarity=0.592 Sum_probs=36.7
Q ss_pred cccccccccCccccceecCCCceEEEEEEECC---------ceEEEEEeccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWHG---------SDVAVKILMEQ 626 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wrG---------t~VAVK~Lk~~ 626 (639)
...|++..+.+.+.+.||+|+||+||++.+.+ ..||+|.++..
T Consensus 10 ~~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~ 61 (307)
T cd05098 10 DPRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD 61 (307)
T ss_pred CCcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC
Confidence 35689999999999999999999999998742 46999999754
No 28
>PTZ00284 protein kinase; Provisional
Probab=95.33 E-value=0.019 Score=62.90 Aligned_cols=41 Identities=29% Similarity=0.410 Sum_probs=35.0
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
+++.+....|.+.++||+|+||+||+|... +..||||+++.
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~ 164 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRN 164 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEec
Confidence 445666788999999999999999999875 67899999864
No 29
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=95.33 E-value=0.026 Score=59.02 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=32.5
Q ss_pred cccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
....+++...++||+|+||+||+|.+. +..||||++...
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 110 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGN 110 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecC
Confidence 334567778889999999999999986 789999998654
No 30
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=95.16 E-value=0.028 Score=56.76 Aligned_cols=45 Identities=29% Similarity=0.380 Sum_probs=39.4
Q ss_pred CCcccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 582 FDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 582 ~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
+....|.+..+++.+.+.||+|+||+||+|.++ +..||||+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~ 51 (296)
T cd06618 5 IDGQKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRT 51 (296)
T ss_pred ecceeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEecc
Confidence 344668888899999999999999999999998 889999999754
No 31
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=94.82 E-value=0.034 Score=55.32 Aligned_cols=45 Identities=33% Similarity=0.419 Sum_probs=38.6
Q ss_pred CCcccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 582 FDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 582 ~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...+.+..+++++.+.+.||+|+||+||++... +..+|||++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~ 54 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI 54 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc
Confidence 445778888999999999999999999999875 789999998653
No 32
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=94.80 E-value=0.03 Score=57.97 Aligned_cols=41 Identities=27% Similarity=0.356 Sum_probs=33.2
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..|+++ +.+.+.+.||+|+||+||+|... +..||||++...
T Consensus 9 ~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~ 51 (343)
T cd07878 9 TVWEVP-ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRP 51 (343)
T ss_pred HHhhhh-hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCch
Confidence 446554 56778899999999999999875 679999998753
No 33
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=94.75 E-value=0.027 Score=64.84 Aligned_cols=55 Identities=33% Similarity=0.430 Sum_probs=43.5
Q ss_pred CCcccccccccCccccceecCCCceEEEEEEEC---------CceEEEEEeccccccHHHHHHHhc
Q 042501 582 FDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH---------GSDVAVKILMEQEFHAERFKEFLR 638 (639)
Q Consensus 582 ~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr---------Gt~VAVK~Lk~~d~s~q~~~eFl~ 638 (639)
... .|+++++++.+.+.||+|.||.|++|..+ ...||||+++..... .+.+.|..
T Consensus 287 ~~~-~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~ 350 (609)
T KOG0200|consen 287 EDP-KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMS 350 (609)
T ss_pred cCC-ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHH
Confidence 344 79999999999999999999999999865 247999999876433 44555544
No 34
>PHA02988 hypothetical protein; Provisional
Probab=94.67 E-value=0.034 Score=56.48 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=33.3
Q ss_pred ccccccCcccc--ceecCCCceEEEEEEECCceEEEEEeccc
Q 042501 587 LDIPWNDLVLK--EKIGAGSFGTVHHADWHGSDVAVKILMEQ 626 (639)
Q Consensus 587 weI~tsef~l~--e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~ 626 (639)
+.|+.++++.. ..||+|++|.||+|.+.|..||||+++..
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~ 54 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKF 54 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEECCEEEEEEecccc
Confidence 44556666666 68999999999999999999999999764
No 35
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=94.65 E-value=0.017 Score=65.63 Aligned_cols=37 Identities=38% Similarity=0.643 Sum_probs=31.0
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEecccccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFH 629 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s 629 (639)
.+--.+++|+|.||+||-|+.+ |++||||++....+.
T Consensus 565 Qif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp 603 (888)
T KOG4236|consen 565 QIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFP 603 (888)
T ss_pred HhhhHhhccCCcceeeecceecccCceeeeeeeecccCC
Confidence 3445679999999999999987 899999999876553
No 36
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=94.56 E-value=0.029 Score=58.22 Aligned_cols=36 Identities=36% Similarity=0.583 Sum_probs=31.5
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+++.+.+.||+|+||+||+|.++ +..||||++...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~ 54 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKR 54 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHH
Confidence 467888999999999999999987 789999998753
No 37
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=94.48 E-value=0.012 Score=67.39 Aligned_cols=42 Identities=31% Similarity=0.471 Sum_probs=39.9
Q ss_pred ccccccccCccccceecCCCceEEEEEEECCceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~ 626 (639)
+.|+||+++|...+-+|+|+-|.||+|.+++..||||+++..
T Consensus 117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~el 158 (904)
T KOG4721|consen 117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVREL 158 (904)
T ss_pred hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhh
Confidence 679999999999999999999999999999999999998875
No 38
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.45 E-value=0.046 Score=57.21 Aligned_cols=36 Identities=33% Similarity=0.296 Sum_probs=30.5
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.+.+.+.||+|+||+||++... |..||||++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~ 57 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 57 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccc
Confidence 356777899999999999999875 789999998653
No 39
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=94.26 E-value=0.045 Score=55.51 Aligned_cols=42 Identities=31% Similarity=0.485 Sum_probs=35.2
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC---------CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH---------GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr---------Gt~VAVK~Lk~~ 626 (639)
..|++...++.+.+.||+|+||.||++.+. +..||||.+...
T Consensus 8 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~ 58 (304)
T cd05101 8 PRWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD 58 (304)
T ss_pred CcccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc
Confidence 458888999999999999999999999763 347999998753
No 40
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.08 E-value=0.041 Score=61.26 Aligned_cols=34 Identities=38% Similarity=0.324 Sum_probs=28.5
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+...++||+|+||.||||... +..||||++...
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le 49 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE 49 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechh
Confidence 3444489999999999999987 779999999764
No 41
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=94.07 E-value=0.06 Score=56.49 Aligned_cols=36 Identities=28% Similarity=0.238 Sum_probs=30.6
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.+.+.+.||+|+||.||++... +..||||++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 60 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 60 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcc
Confidence 456778899999999999999875 789999998753
No 42
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=94.00 E-value=0.05 Score=55.58 Aligned_cols=42 Identities=36% Similarity=0.486 Sum_probs=35.6
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC-------CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH-------GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr-------Gt~VAVK~Lk~~ 626 (639)
..|.+.+++|.+.+.||+|+||.||++.+. +..||||+++..
T Consensus 28 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~ 76 (302)
T cd05055 28 LKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPT 76 (302)
T ss_pred ccccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCcc
Confidence 458888899999999999999999999852 347999998754
No 43
>COG1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]
Probab=93.88 E-value=0.25 Score=49.98 Aligned_cols=105 Identities=23% Similarity=0.277 Sum_probs=62.0
Q ss_pred ChhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCcchhhHHHhHHHHHhhhCCeEEEeeccccccchhh
Q 042501 265 DPSLKELQNRVVNISCTCITTQEVVDQLAKLVCNRMGGSATTGEDDFVPIWRECSDDIKDCLGSVVVPIGSLSIGLCRHR 344 (639)
Q Consensus 265 D~~L~~L~~~a~~l~~~~~~~~~~v~~LA~lVad~MGG~v~~~~~~l~~~wk~~~~~LK~~l~S~ViPIG~L~~GlcRHR 344 (639)
++.+.+|.. .+........+.+..|...|-+..--...... .......-|+ .| .|.|+|-
T Consensus 141 ~~~~~~la~---~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~-----~~~~~~~~l~---------~~---~G~C~d~ 200 (319)
T COG1305 141 KPRVAELAA---RETGGATTPREKAAALFDYVNSKIRYSPGPTP-----VTGSASDALR---------LG---RGVCRDF 200 (319)
T ss_pred cHHHHHHHH---HhhcccCCHHHHHHHHHHHHhhcceeecCCCC-----CCCCHHHHHH---------hC---CcccccH
Confidence 344444443 35555667788888888888533332221000 0000111111 22 9999999
Q ss_pred HHHHHHHhhhcCCCceEecccccCCCC--------------CCcceeEEeCCCeEEEEeCC
Q 042501 345 TLLFKVLADAIDLPCRIAKGCKYCKRE--------------DASSCLVRFGLDREYLVDLI 391 (639)
Q Consensus 345 ALLFKvLAD~IgLPCrLVRG~~Y~~~d--------------d~a~~~Vk~~~~reyiVDLM 391 (639)
|.||=.||=..|||||+|.| |+... -++|..|-+..-.++-+|--
T Consensus 201 a~l~val~Ra~GIpAR~V~G--y~~~~~~~~~~~~~~~~~~~Haw~ev~~~~~gW~~~Dpt 259 (319)
T COG1305 201 AHLLVALLRAAGIPARYVSG--YLGAEVEPLSGRPLVRNDDAHAWAEVYLPGRGWVPLDPT 259 (319)
T ss_pred HHHHHHHHHHcCCcceeeec--cccCCCCcccccccccCcccceeeeeecCCCccEeecCC
Confidence 99999999999999999999 43332 24555555533236666643
No 44
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=93.80 E-value=0.047 Score=58.03 Aligned_cols=41 Identities=27% Similarity=0.398 Sum_probs=35.2
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
..+.+..+++.+.++||+|+||+||++... +..||||++..
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~ 78 (370)
T cd05596 36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSK 78 (370)
T ss_pred ccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 345667788999999999999999999876 77999999864
No 45
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=93.68 E-value=0.08 Score=55.26 Aligned_cols=36 Identities=28% Similarity=0.246 Sum_probs=30.6
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.+.+.+.||+|+||.||++... +..||||++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~ 53 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCc
Confidence 457788899999999999999765 789999998753
No 46
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=93.60 E-value=0.063 Score=57.19 Aligned_cols=41 Identities=29% Similarity=0.425 Sum_probs=35.5
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
.++.+..+++.+.+.||+|+||+||++... +..||+|++..
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~ 78 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 78 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEH
Confidence 346677789999999999999999999987 67999999864
No 47
>PTZ00036 glycogen synthase kinase; Provisional
Probab=93.34 E-value=0.082 Score=57.96 Aligned_cols=38 Identities=34% Similarity=0.453 Sum_probs=32.0
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+...+.+.++||+|+||+||+|... +..||||++...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~ 102 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD 102 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC
Confidence 34567888999999999999999986 789999988643
No 48
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=93.32 E-value=0.083 Score=55.06 Aligned_cols=40 Identities=28% Similarity=0.472 Sum_probs=32.9
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
.-|++. ..+...+.||+|+||+||+|.+. |..||||++..
T Consensus 9 ~~~~~~-~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~ 50 (342)
T cd07879 9 TVWELP-ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR 50 (342)
T ss_pred hhhccc-cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecC
Confidence 346664 36778899999999999999975 78999999864
No 49
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=93.27 E-value=0.079 Score=55.78 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=32.9
Q ss_pred ccccccCccccceecCCCceEEEEEEEC---CceEEEEEecc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH---GSDVAVKILME 625 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr---Gt~VAVK~Lk~ 625 (639)
+.+..+++.+.+.||+|+||+||+|.++ +..||||++..
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~ 66 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEK 66 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEH
Confidence 5566778888999999999999999876 25799999864
No 50
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=93.25 E-value=0.067 Score=60.76 Aligned_cols=41 Identities=37% Similarity=0.534 Sum_probs=35.9
Q ss_pred cccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEF 628 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~ 628 (639)
.+..++|.+-+.||+|+||+||.+.-+ |..+|+|+|+...+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M 179 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM 179 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH
Confidence 456789999999999999999999987 88999999987543
No 51
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=93.02 E-value=0.1 Score=59.73 Aligned_cols=38 Identities=32% Similarity=0.470 Sum_probs=32.4
Q ss_pred cccccCccccceecCCCceEEEEEEEC------CceEEEEEecc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH------GSDVAVKILME 625 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr------Gt~VAVK~Lk~ 625 (639)
....++|.+.++||+|+||+||+|.+. +..||||++..
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 345678889999999999999999985 46899999865
No 52
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=92.94 E-value=0.13 Score=51.19 Aligned_cols=42 Identities=26% Similarity=0.366 Sum_probs=34.6
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+...+.+.+.+.+.||.|+||+||+|... +..||+|++...
T Consensus 9 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~ 52 (282)
T cd06636 9 SALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT 52 (282)
T ss_pred hhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC
Confidence 444556778888899999999999999986 789999998653
No 53
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=92.74 E-value=0.14 Score=53.64 Aligned_cols=37 Identities=30% Similarity=0.267 Sum_probs=31.3
Q ss_pred cccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.++.+.+.+.||+|+||.||+|... +..||||++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~ 53 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 53 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCc
Confidence 3467888899999999999999864 789999998753
No 54
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=92.68 E-value=0.11 Score=56.61 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=28.6
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+...++||.|+||.||+|.+. +..||||+..+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d 60 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD 60 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC
Confidence 3445679999999999999998 679999998664
No 55
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=92.67 E-value=0.096 Score=55.88 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=34.1
Q ss_pred cccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 586 DLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 586 eweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
.+.+..+++.+.++||+|+||+||++... +..||+|++..
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~ 78 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSK 78 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence 35556778889999999999999999987 67999999864
No 56
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=92.52 E-value=0.16 Score=52.97 Aligned_cols=38 Identities=29% Similarity=0.417 Sum_probs=31.4
Q ss_pred ccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
|.+ .+.+.+.+.||+|+||+||++... +..||||++..
T Consensus 11 ~~~-~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 50 (343)
T cd07880 11 WEV-PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR 50 (343)
T ss_pred hcc-ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecc
Confidence 544 445778899999999999999876 78999999864
No 57
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=92.37 E-value=0.034 Score=59.45 Aligned_cols=49 Identities=29% Similarity=0.395 Sum_probs=37.6
Q ss_pred cccCccccceecCCCceEEEEEEE--CCceEEEEEeccccccHHHHHHHhc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADW--HGSDVAVKILMEQEFHAERFKEFLR 638 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~w--rGt~VAVK~Lk~~d~s~q~~~eFl~ 638 (639)
+..++.+.++||.|+||+|||+.. .|..||.|.+.-..++...+++...
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~ 67 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVK 67 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHH
Confidence 455788899999999999999874 4899999998765556555555443
No 58
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=92.27 E-value=0.21 Score=50.83 Aligned_cols=35 Identities=31% Similarity=0.242 Sum_probs=29.7
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
...+...+.||+|+||+||+|... +..||||.+..
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~ 50 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSY 50 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 345777789999999999999986 78999999864
No 59
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=91.92 E-value=0.23 Score=60.78 Aligned_cols=53 Identities=21% Similarity=0.286 Sum_probs=39.4
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHHh
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEFL 637 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eFl 637 (639)
...++..+++.+.++||+|+||+||++... +..||+|.+............|+
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~ 60 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLV 60 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHH
Confidence 345566778999999999999999999987 67899999875433333334444
No 60
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=91.48 E-value=0.24 Score=51.69 Aligned_cols=41 Identities=24% Similarity=0.297 Sum_probs=33.2
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..|++ .+++.+...||+|+||+||+|.+. +..||||++...
T Consensus 9 ~~~~~-~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~ 51 (343)
T cd07851 9 TVWEV-PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRP 51 (343)
T ss_pred ceecc-cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccc
Confidence 34555 446788899999999999999986 679999998653
No 61
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=91.28 E-value=0.26 Score=51.47 Aligned_cols=34 Identities=32% Similarity=0.342 Sum_probs=29.5
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
..+...+.||+|+||+||++... +..||||++..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~ 51 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR 51 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCc
Confidence 56777889999999999999875 78999999864
No 62
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=91.22 E-value=0.41 Score=47.99 Aligned_cols=44 Identities=34% Similarity=0.448 Sum_probs=37.0
Q ss_pred CcccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 583 DVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 583 s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...++..+.+++.+.+.||+|+||.||++... +..+|||++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~ 58 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI 58 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc
Confidence 34566667888999999999999999999986 789999998653
No 63
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=90.99 E-value=0.28 Score=50.38 Aligned_cols=35 Identities=31% Similarity=0.242 Sum_probs=29.7
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
...|...+.||+|+||+||+|.+. +..||||++..
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~ 60 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSY 60 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence 345677889999999999999986 78999999864
No 64
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=90.84 E-value=0.27 Score=50.06 Aligned_cols=35 Identities=40% Similarity=0.376 Sum_probs=29.8
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+.+.+.||+|+||+||+|... +..||||.+...
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~ 55 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ 55 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecC
Confidence 45667789999999999999864 789999998754
No 65
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=90.61 E-value=0.31 Score=49.53 Aligned_cols=36 Identities=39% Similarity=0.335 Sum_probs=29.9
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...+.+.+.||+|+||+||+|... +..||||.+...
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~ 55 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ 55 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc
Confidence 356777889999999999999864 678999998653
No 66
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=90.53 E-value=0.26 Score=47.76 Aligned_cols=32 Identities=31% Similarity=0.200 Sum_probs=27.3
Q ss_pred ccccceecCCCceEEEEEEEC-CceEEEEEecc
Q 042501 594 LVLKEKIGAGSFGTVHHADWH-GSDVAVKILME 625 (639)
Q Consensus 594 f~l~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~ 625 (639)
..+.+.||+|+||.||++.+. |..||||+++.
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 344678999999999999986 88999998764
No 67
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=90.47 E-value=0.036 Score=59.61 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=31.0
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
+-|++..++|+|+||.||++..+ |+.||||.+...
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~ 69 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD 69 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc
Confidence 45778889999999999999987 899999999765
No 68
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=90.45 E-value=0.33 Score=49.35 Aligned_cols=35 Identities=37% Similarity=0.380 Sum_probs=29.5
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+.+.+.||+|+||+||+|... +..||||.+...
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~ 56 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ 56 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecC
Confidence 45667789999999999999875 789999998754
No 69
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.37 E-value=0.25 Score=57.69 Aligned_cols=41 Identities=29% Similarity=0.441 Sum_probs=35.3
Q ss_pred ccccccCccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
-.+..++|.+..++|+|+||+|+.+.++ +...|||+|+...
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~ 405 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGD 405 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccc
Confidence 3456778999999999999999999998 5689999998754
No 70
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=90.36 E-value=0.2 Score=52.66 Aligned_cols=36 Identities=31% Similarity=0.420 Sum_probs=31.7
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.++|.+++.+|.|.||.||.|+.+ +-.||+|++...
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs 58 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS 58 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHH
Confidence 568889999999999999999988 669999998653
No 71
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=90.11 E-value=0.11 Score=63.83 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=31.1
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.++|..-..+|+||||.||+++.+ |+.+|||++...
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~ 515 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLK 515 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCc
Confidence 356777789999999999999876 999999999765
No 72
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=90.08 E-value=0.16 Score=55.53 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.++|..-++|++|.||.||||+-. ...||.|+++..
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kme 112 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKME 112 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccc
Confidence 356777889999999999999876 679999999864
No 73
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=89.83 E-value=0.32 Score=49.59 Aligned_cols=37 Identities=41% Similarity=0.424 Sum_probs=30.8
Q ss_pred cccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
++..+...+.||.|+||+||+|... +..||||.+...
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~ 55 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ 55 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc
Confidence 3456778889999999999999865 789999998654
No 74
>smart00090 RIO RIO-like kinase.
Probab=89.76 E-value=0.29 Score=49.86 Aligned_cols=34 Identities=29% Similarity=0.197 Sum_probs=28.6
Q ss_pred CccccceecCCCceEEEEEE---ECCceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHAD---WHGSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~---wrGt~VAVK~Lk~~ 626 (639)
-+.+.+.||+|+||.||+|. ..|+.||||+++..
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~ 65 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTG 65 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcC
Confidence 35577899999999999997 24899999998754
No 75
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=89.70 E-value=0.13 Score=58.44 Aligned_cols=37 Identities=32% Similarity=0.333 Sum_probs=31.1
Q ss_pred cccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+.|...++||+|.||.|||++-. |..||+|+++-.
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d 153 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFD 153 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecc
Confidence 3456777789999999999999865 889999999754
No 76
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=89.69 E-value=0.28 Score=56.66 Aligned_cols=34 Identities=41% Similarity=0.551 Sum_probs=29.5
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.+.+.||+|+||.|-|+.-+ ++.||||+++..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~ 222 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK 222 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC
Confidence 5567889999999999999766 689999999864
No 77
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=89.52 E-value=0.14 Score=54.48 Aligned_cols=44 Identities=27% Similarity=0.325 Sum_probs=36.8
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEF 628 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~ 628 (639)
.-|.....++.....||.|+||+|+|-..+ |...|||+++....
T Consensus 57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~ 102 (361)
T KOG1006|consen 57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI 102 (361)
T ss_pred cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc
Confidence 346667778888889999999999998887 88999999987643
No 78
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=89.01 E-value=0.39 Score=48.82 Aligned_cols=34 Identities=41% Similarity=0.311 Sum_probs=27.2
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.....||+|+||.||++... +..||||.+...
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~ 58 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR 58 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc
Confidence 3344567999999999999875 789999998653
No 79
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=88.66 E-value=0.46 Score=52.89 Aligned_cols=30 Identities=37% Similarity=0.521 Sum_probs=27.1
Q ss_pred cceecCCCceEEEEEEEC-CceEEEEEeccc
Q 042501 597 KEKIGAGSFGTVHHADWH-GSDVAVKILMEQ 626 (639)
Q Consensus 597 ~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~ 626 (639)
.+.||+|++|.||+|.++ |+.||||+.++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~ 152 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPG 152 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCC
Confidence 357999999999999997 999999999875
No 80
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=88.47 E-value=0.36 Score=51.06 Aligned_cols=37 Identities=35% Similarity=0.433 Sum_probs=30.7
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
|-...+.+.++||+|+||.+|.|..- |..||||+=..
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~ 50 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS 50 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecc
Confidence 34557788899999999999999865 89999998543
No 81
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=88.44 E-value=0.37 Score=49.11 Aligned_cols=34 Identities=41% Similarity=0.351 Sum_probs=27.1
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.....||+|+||.||++... +..||||.+...
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~ 57 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLR 57 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEec
Confidence 3334457999999999999875 789999998653
No 82
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=88.36 E-value=0.16 Score=46.76 Aligned_cols=34 Identities=29% Similarity=0.464 Sum_probs=28.8
Q ss_pred cCccccceecCCCceEEEEEEEC-CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH-GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~ 626 (639)
.+|+ .+-|++|+.|.||+|.++ |+.||||+.++.
T Consensus 12 ~~fd-~~PlasASiaQVh~a~l~~g~~VaVKV~rP~ 46 (119)
T PF03109_consen 12 DEFD-PEPLASASIAQVHRARLKDGEEVAVKVQRPG 46 (119)
T ss_pred HHCC-cchhhheehhhheeeeecccchhhhhhcchH
Confidence 3444 457899999999999998 899999999875
No 83
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=88.04 E-value=0.5 Score=51.86 Aligned_cols=48 Identities=23% Similarity=0.291 Sum_probs=35.3
Q ss_pred ccccCccccceecCCCceEEEEEEE--CCceEEEEEeccccccHHHHHHH
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADW--HGSDVAVKILMEQEFHAERFKEF 636 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~w--rGt~VAVK~Lk~~d~s~q~~~eF 636 (639)
+-.-.+.++++||+|+||.++.|.. ++.+||||.=....-..+...++
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEY 74 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEY 74 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHH
Confidence 3345788999999999999999974 58999999754432234555444
No 84
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=88.01 E-value=0.59 Score=46.76 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=32.2
Q ss_pred cccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
+++.+...+.||+|+||.||+|.+. +..||+|++...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~ 55 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLR 55 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecC
Confidence 4566778889999999999999997 789999999765
No 85
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=87.78 E-value=0.6 Score=47.60 Aligned_cols=30 Identities=43% Similarity=0.359 Sum_probs=25.6
Q ss_pred cceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 597 KEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 597 ~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
-.+||+|+||.||++... +..||||.+...
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~ 56 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR 56 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc
Confidence 368999999999999986 789999998643
No 86
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=87.63 E-value=0.81 Score=47.04 Aligned_cols=30 Identities=40% Similarity=0.382 Sum_probs=25.7
Q ss_pred ccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 596 LKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 596 l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
..++||+|+||+||+|... +..||||++..
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~ 56 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSY 56 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEec
Confidence 3467999999999999875 78999999864
No 87
>PHA03209 serine/threonine kinase US3; Provisional
Probab=87.62 E-value=0.6 Score=49.27 Aligned_cols=36 Identities=22% Similarity=0.120 Sum_probs=29.9
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...+.+.+.||+|+||.||+|.+. +..||+|+....
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~ 102 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG 102 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc
Confidence 346788899999999999999987 568999986543
No 88
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=87.55 E-value=0.56 Score=56.01 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=29.6
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+...++||+|+||+||+|.+. +..||||+++..
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 35666789999999999999975 789999998754
No 89
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=86.87 E-value=0.64 Score=50.96 Aligned_cols=50 Identities=28% Similarity=0.370 Sum_probs=37.3
Q ss_pred cccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHHhc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEFLR 638 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eFl~ 638 (639)
.|..+++.....||+|..|+|||+..+ +..+|.|++... ......++.++
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~r 126 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILR 126 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHH
Confidence 355668888899999999999999988 789999999543 23333344443
No 90
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=86.71 E-value=0.9 Score=45.86 Aligned_cols=34 Identities=41% Similarity=0.299 Sum_probs=27.6
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+..-+.||+|+||.||++... +..||||++...
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~ 55 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR 55 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc
Confidence 3444579999999999999875 688999998643
No 91
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=86.60 E-value=0.28 Score=57.58 Aligned_cols=32 Identities=34% Similarity=0.567 Sum_probs=28.0
Q ss_pred cccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 595 VLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 595 ~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...+.||+|+||.||+|..+ |..||||.++..
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~ 49 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKE 49 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhh
Confidence 35678999999999999977 899999999763
No 92
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=86.58 E-value=0.74 Score=51.93 Aligned_cols=43 Identities=28% Similarity=0.308 Sum_probs=37.9
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...|-+..+++.+.++||.|.-++||+|+.. +..||||++.-.
T Consensus 18 ~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLE 62 (516)
T KOG0582|consen 18 EKEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLE 62 (516)
T ss_pred cccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehh
Confidence 4567788889999999999999999999987 789999999764
No 93
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=86.45 E-value=0.67 Score=47.41 Aligned_cols=35 Identities=31% Similarity=0.232 Sum_probs=28.9
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
...+...+.||+|+||+||+|... +..||||.+..
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~ 50 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY 50 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEec
Confidence 444666788999999999999986 67899999864
No 94
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=86.39 E-value=1.1 Score=53.32 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=42.8
Q ss_pred cCCcccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHH
Q 042501 581 TFDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEF 636 (639)
Q Consensus 581 ~~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eF 636 (639)
.+...-++|....+.+++.|.+|||+.||.+... |..+|+|++... ++...+..
T Consensus 26 ~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v 81 (738)
T KOG1989|consen 26 YFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAV 81 (738)
T ss_pred CCCceEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHH
Confidence 3444668899999999999999999999999987 489999998765 34444433
No 95
>PHA03212 serine/threonine kinase US3; Provisional
Probab=85.92 E-value=0.84 Score=49.38 Aligned_cols=38 Identities=16% Similarity=0.065 Sum_probs=31.5
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
+....+.+.+.||+|+||.||++.-. +..||||.....
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~ 128 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRG 128 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhh
Confidence 44567888999999999999999876 789999986543
No 96
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=85.77 E-value=0.73 Score=53.28 Aligned_cols=34 Identities=26% Similarity=0.309 Sum_probs=29.7
Q ss_pred cCccccceecCCCceEEEEEEE-C-CceEEEEEecc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADW-H-GSDVAVKILME 625 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~w-r-Gt~VAVK~Lk~ 625 (639)
..+..++.||+|+|.+||++.- . |..||+|++..
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk 53 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPK 53 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeeh
Confidence 3567788999999999999987 3 89999999975
No 97
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=85.55 E-value=0.86 Score=49.76 Aligned_cols=38 Identities=34% Similarity=0.586 Sum_probs=31.9
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.....+.+++.||+|+||+|+.|... +..||||++...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~ 53 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRK 53 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechh
Confidence 44567778999999999999999876 789999987653
No 98
>PHA03207 serine/threonine kinase US3; Provisional
Probab=84.50 E-value=2.3 Score=45.60 Aligned_cols=37 Identities=22% Similarity=0.175 Sum_probs=30.3
Q ss_pred cccCccccceecCCCceEEEEEEEC----CceEEEEEeccc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH----GSDVAVKILMEQ 626 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr----Gt~VAVK~Lk~~ 626 (639)
-...+.+.+.||+|+||+||++..+ +..||||.+...
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~ 130 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG 130 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc
Confidence 3456888899999999999999865 468999998654
No 99
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=84.25 E-value=2.2 Score=46.10 Aligned_cols=44 Identities=25% Similarity=0.338 Sum_probs=38.4
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
......+.+++.....||.|+.|+||+..++ |..+|||......
T Consensus 84 g~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~ 129 (391)
T KOG0983|consen 84 GQRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG 129 (391)
T ss_pred CcccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC
Confidence 4556777889998999999999999999998 6899999998764
No 100
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=83.78 E-value=1 Score=51.75 Aligned_cols=35 Identities=29% Similarity=0.552 Sum_probs=30.0
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+|+. +-||+|++|.||+|.++ |+.||||++++.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 445665 78999999999999997 899999999865
No 101
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=83.61 E-value=0.97 Score=49.72 Aligned_cols=35 Identities=29% Similarity=0.511 Sum_probs=29.7
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+.+.+.||.|.||.||++.-+ |..+|+|.+...
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~ 71 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKR 71 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehh
Confidence 34566799999999999999987 789999999654
No 102
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=82.83 E-value=0.69 Score=50.63 Aligned_cols=39 Identities=31% Similarity=0.447 Sum_probs=33.4
Q ss_pred cccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+..++|.+.++||+|+||+||..+-+ ++..|+|+++..
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~ 61 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKK 61 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhh
Confidence 355778999999999999999998876 788999998754
No 103
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=82.60 E-value=0.62 Score=53.50 Aligned_cols=36 Identities=33% Similarity=0.467 Sum_probs=31.7
Q ss_pred cccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 590 PWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 590 ~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
..++|.+++.||+|+|.+|+++.-. +..+|||++..
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K 108 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDK 108 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhH
Confidence 4568999999999999999999876 78999999854
No 104
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=82.17 E-value=1.3 Score=49.65 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=29.8
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
+...+.+.+|+|+||.|-.|.-+ |..||||++...
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~kr 208 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKR 208 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehh
Confidence 44556789999999999999877 889999999754
No 105
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=81.52 E-value=1.3 Score=47.63 Aligned_cols=36 Identities=31% Similarity=0.346 Sum_probs=30.8
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..++...+.||+|+||+||.+... |...|||.+...
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~ 53 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE 53 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc
Confidence 345667889999999999999987 789999998765
No 106
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=80.67 E-value=1.3 Score=54.21 Aligned_cols=43 Identities=26% Similarity=0.437 Sum_probs=37.0
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC-CceEEEEEeccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH-GSDVAVKILMEQ 626 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~ 626 (639)
..++++....+.+.+.||+|+||+||+|.-. |..||+|+=++.
T Consensus 690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~ 733 (974)
T KOG1166|consen 690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP 733 (974)
T ss_pred cceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCC
Confidence 3567788888999999999999999999865 899999997654
No 107
>PF04473 DUF553: Transglutaminase-like domain; InterPro: IPR007562 This entry represents a transglutaminase-like domain found in a family of uncharacterised archaeal proteins that had previously been called DUF553 and UPF0252.
Probab=79.92 E-value=3.7 Score=40.11 Aligned_cols=107 Identities=12% Similarity=0.222 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCCCCCC--CcchhhHHHhHHHHHhhhCC---eEEEeec--cccccchhhHHHHHHHhhhc
Q 042501 283 ITTQEVVDQLAKLVCNRMGGSATTGE--DDFVPIWRECSDDIKDCLGS---VVVPIGS--LSIGLCRHRTLLFKVLADAI 355 (639)
Q Consensus 283 ~~~~~~v~~LA~lVad~MGG~v~~~~--~~l~~~wk~~~~~LK~~l~S---~ViPIG~--L~~GlcRHRALLFKvLAD~I 355 (639)
.+..+-+..+.+.+.+.|-=-..+.. +.+...|.....+.+...+. .--|... .+.|+|+--|+|...|-=..
T Consensus 13 ~~~~e~~~nIl~W~~~NI~Yd~~Ka~~~~~~i~~~~~~~~~~~~~~~~~~~i~tp~etl~~k~GiC~DYA~Lta~lLl~~ 92 (153)
T PF04473_consen 13 NDIKETIWNILEWEDENIEYDYEKAESPEPFIYIWSTYRTEVYEDYKNSTYIQTPYETLKYKKGICGDYAILTAALLLNM 92 (153)
T ss_pred CCHHHHHHHHHHHHHhccccchhhccCCCceeEeeeccceeeeccccccccccCHHHHHHcCCeeeHHHHHHHHHHHHHC
Confidence 46778888888888887652221110 11112333221111111100 1134443 46899999999999999999
Q ss_pred CCCceEecccccCCCCCCcceeEEeCCCeEEEEeC
Q 042501 356 DLPCRIAKGCKYCKREDASSCLVRFGLDREYLVDL 390 (639)
Q Consensus 356 gLPCrLVRG~~Y~~~dd~a~~~Vk~~~~reyiVDL 390 (639)
|+.-.-|-+..+.+...++++.|++ ++..|++|=
T Consensus 93 g~~~~yi~~~~~~~~~~Haa~aV~i-ng~~yvlDq 126 (153)
T PF04473_consen 93 GYSPVYILHIEFDNDPGHAAVAVKI-NGKYYVLDQ 126 (153)
T ss_pred CCCceEEEEEecCCCCCeEEEEEEE-CCEEEEEeC
Confidence 9865444466666655788899999 778999994
No 108
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=79.07 E-value=2.7 Score=47.62 Aligned_cols=29 Identities=21% Similarity=0.421 Sum_probs=23.8
Q ss_pred cccceecCCCceEEEEEEECCceEEEEEe
Q 042501 595 VLKEKIGAGSFGTVHHADWHGSDVAVKIL 623 (639)
Q Consensus 595 ~l~e~IGeGsFGtVYRG~wrGt~VAVK~L 623 (639)
...+.||+|+||+||+|.|.+..+++|+.
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~ 364 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGRDAVIKER 364 (535)
T ss_pred CccceeccCCcEEEEEEeecCccceeEEE
Confidence 34789999999999999998776666653
No 109
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=79.04 E-value=0.35 Score=59.38 Aligned_cols=42 Identities=31% Similarity=0.420 Sum_probs=35.5
Q ss_pred cccccccCccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 586 DLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 586 eweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
++....++|.+.++||+|+||.|+..+.+ +..+|.|++....
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e 112 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE 112 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH
Confidence 45667789999999999999999999887 6688999987643
No 110
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=78.92 E-value=0.45 Score=53.07 Aligned_cols=55 Identities=20% Similarity=0.387 Sum_probs=41.0
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC-------CceEEEEEeccccccHHHHHHHhcC
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH-------GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr-------Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
..++.+....+.+...+-+|.||.||+|.|+ .+.|-||+++... ++-+...|++|
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~e 337 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQE 337 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHH
Confidence 3556677777888889999999999999997 2467788888763 45455555544
No 111
>PHA03211 serine/threonine kinase US3; Provisional
Probab=78.74 E-value=2 Score=48.06 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=29.3
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
...+.+...||+|+||.||++... +..||||....
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~ 204 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY 204 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc
Confidence 346778899999999999999987 67899997543
No 112
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=78.08 E-value=2.4 Score=49.26 Aligned_cols=42 Identities=29% Similarity=0.491 Sum_probs=34.5
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHH
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAER 632 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~ 632 (639)
...+.+...||+|.|++|..|+.. +..||||.+.....+...
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~ 98 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK 98 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH
Confidence 456778899999999999999876 889999999876554443
No 113
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=77.95 E-value=1.6 Score=47.82 Aligned_cols=40 Identities=33% Similarity=0.560 Sum_probs=31.5
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
..|+++..... .+.||+|+||.|+.+... |..||||++..
T Consensus 16 ~~~~i~~~y~~-~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~ 57 (359)
T KOG0660|consen 16 ELFEIPRYYVL-IEPIGRGAYGVVCSAKDKRTGEKVAIKKILN 57 (359)
T ss_pred eEEeccceecc-cccccCcceeeEEEEEEcCCCCEeehhhhhh
Confidence 44565554433 678999999999999887 88999999873
No 114
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=77.60 E-value=1.5 Score=51.19 Aligned_cols=32 Identities=34% Similarity=0.332 Sum_probs=25.8
Q ss_pred ccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 594 LVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 594 f~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
|...+.||.|+||.||-+.-. ...||||++.-
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsy 61 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSY 61 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccc
Confidence 444568999999999998765 57999999753
No 115
>PHA03210 serine/threonine kinase US3; Provisional
Probab=76.38 E-value=1.1 Score=50.21 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=20.8
Q ss_pred ccCccccceecCCCceEEEEEEEC
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH 614 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr 614 (639)
...+.+.++||+|+||+||++.++
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~ 170 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALR 170 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEe
Confidence 357888899999999999998875
No 116
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=75.45 E-value=2.4 Score=48.37 Aligned_cols=39 Identities=33% Similarity=0.446 Sum_probs=33.0
Q ss_pred cccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..-.+++.+...||+|.||.|-+|+-- +..||||++...
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~ 133 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKK 133 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechh
Confidence 345678889999999999999999765 789999999754
No 117
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=75.02 E-value=3.4 Score=45.93 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=27.3
Q ss_pred CccccceecCCCceEEEEEEEC---CceEEEEEeccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH---GSDVAVKILMEQ 626 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr---Gt~VAVK~Lk~~ 626 (639)
.+.+.+.||+|+||.||++... +..||+|.+...
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~ 104 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN 104 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC
Confidence 3677889999999999999764 457888877544
No 118
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=72.57 E-value=2.8 Score=43.82 Aligned_cols=48 Identities=29% Similarity=0.475 Sum_probs=37.4
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHH
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAER 632 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~ 632 (639)
..++++-+.+.-...||+|+||.|-+-++. |+..|||++...-.++++
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q 88 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQ 88 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHH
Confidence 348889999999999999999977655543 999999999865333433
No 119
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=72.39 E-value=0.83 Score=49.07 Aligned_cols=52 Identities=29% Similarity=0.462 Sum_probs=40.7
Q ss_pred cccccCccccceecCCCceEEEEEEECCceEEEEEeccccccHHHHHHHhcC
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
-|+..++.+..+|.+...|+.|||+|+|.++.+|+|+..+.+..--++|..|
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfnee 237 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEE 237 (448)
T ss_pred CcchhhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhh
Confidence 3667788889999999999999999999999999998765444333455443
No 120
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=71.55 E-value=4.5 Score=41.25 Aligned_cols=41 Identities=20% Similarity=0.433 Sum_probs=34.4
Q ss_pred ccccccCccccceecCCCceEEEEEEECCceEEEEEecccc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQE 627 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~d 627 (639)
.+.+.-.+.....|++|.+|.||.|.|+|..||+|+-+..+
T Consensus 17 ~~~~~~~~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds 57 (201)
T COG2112 17 VEEGKYELRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS 57 (201)
T ss_pred eeccchhhhhhhhhhcccccEEEEeeccCceEEEEEecCCc
Confidence 34455667778899999999999999999999999987764
No 121
>PF00797 Acetyltransf_2: N-acetyltransferase; InterPro: IPR001447 Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30 kDa. It facilitates the transfer of an acetyl group from acetyl coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (Mycobacterium tuberculosis, Mycobacterium smegmatis etc) to Homo sapiens (Human). It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid. NAT catalyses the reaction: Acetyl-coA + arylamine = coA + N-acetylarylamine NAT is the target of a common genetic polymorphism of clinical relevance in humans. The N-acetylation polymorphism is determined by low or high NAT activity in liver. NAT has been implicated in the action and toxicity of amine-containing drugs, and in the susceptibility to cancer and systematic lupus erythematosus. Two highly similar human genes for NAT, termed NAT1 and NAT2, encode genetically invariant and variant NAT proteins, respectively. ; GO: 0016407 acetyltransferase activity, 0008152 metabolic process; PDB: 1W6F_A 1W5R_A 1GX3_D 2PQT_A 2IJA_A 1W4T_A 2BSZ_B 3D9W_B 3LTW_A 3LNB_A ....
Probab=70.61 E-value=5.9 Score=39.90 Aligned_cols=53 Identities=21% Similarity=0.244 Sum_probs=38.7
Q ss_pred cccchhhHHHHHHHhhhcCCCceEecccccCCCCC-------CcceeEEeCCCeEEEEeCC
Q 042501 338 IGLCRHRTLLFKVLADAIDLPCRIAKGCKYCKRED-------ASSCLVRFGLDREYLVDLI 391 (639)
Q Consensus 338 ~GlcRHRALLFKvLAD~IgLPCrLVRG~~Y~~~dd-------~a~~~Vk~~~~reyiVDLM 391 (639)
=|.|.+--.||..|=..+|..|+++.|.-+..... +...+|.+ +++.|+||.=
T Consensus 46 GG~C~elN~lf~~lL~~lGf~v~~~~arv~~~~~~~~~~~~~H~~liV~~-~~~~ylvDvG 105 (240)
T PF00797_consen 46 GGYCFELNGLFYWLLRELGFDVTLVSARVYSPGGPDYWPPRTHLVLIVTL-DGERYLVDVG 105 (240)
T ss_dssp -B-HHHHHHHHHHHHHHCT-EEEEEEEEEETTTTTCCSSSEEEEEEEEEE-TTEEEEE-SS
T ss_pred CeEhHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEEecc
Confidence 49999999999999999999999999876554433 23345676 6679999973
No 122
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=70.53 E-value=5.6 Score=48.26 Aligned_cols=43 Identities=28% Similarity=0.402 Sum_probs=35.6
Q ss_pred cccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 584 VDDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 584 ~eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.+.+--+++.+.+.++||.|.+|.||+++-+ ++.+|||++...
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~ 55 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT 55 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC
Confidence 3455667778888999999999999999865 889999998764
No 123
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=69.17 E-value=4.5 Score=42.58 Aligned_cols=33 Identities=30% Similarity=0.387 Sum_probs=27.1
Q ss_pred CccccceecCCCceEEEEEEECC---ceEEEEEecc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWHG---SDVAVKILME 625 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wrG---t~VAVK~Lk~ 625 (639)
.+.+..+||+|+||+||.+.-.. ..+|+|.-..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~ 54 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKK 54 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEe
Confidence 67789999999999999998653 3688888654
No 124
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=68.74 E-value=4.6 Score=45.72 Aligned_cols=38 Identities=37% Similarity=0.487 Sum_probs=33.2
Q ss_pred cccccCccccceecCCCceEEEEEEECCc--eEEEEEecc
Q 042501 588 DIPWNDLVLKEKIGAGSFGTVHHADWHGS--DVAVKILME 625 (639)
Q Consensus 588 eI~tsef~l~e~IGeGsFGtVYRG~wrGt--~VAVK~Lk~ 625 (639)
.|...+|....+||.|+||.|-.+.-+|+ ..|||+|+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkK 384 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKK 384 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhcc
Confidence 66777899999999999999999998864 689999875
No 125
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=67.93 E-value=3.9 Score=44.46 Aligned_cols=37 Identities=35% Similarity=0.520 Sum_probs=31.3
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
.++|.....||.|+||+|+..+.+ |.-.|+|+|..+.
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~ 81 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK 81 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH
Confidence 456778889999999999999877 7789999997653
No 126
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=67.62 E-value=1.7 Score=51.31 Aligned_cols=38 Identities=32% Similarity=0.506 Sum_probs=32.5
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
-|.+++.+..+||+|.||.|||++-. +..+|||+++..
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe 51 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE 51 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc
Confidence 45678888999999999999999865 789999998753
No 127
>PF13369 Transglut_core2: Transglutaminase-like superfamily
Probab=67.53 E-value=43 Score=31.99 Aligned_cols=110 Identities=18% Similarity=0.272 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCcchhhHHHhHHHHHhhhCCeEEEeeccccccchhhHH
Q 042501 267 SLKELQNRVVNISCTCITTQEVVDQLAKLVCNRMGGSATTGEDDFVPIWRECSDDIKDCLGSVVVPIGSLSIGLCRHRTL 346 (639)
Q Consensus 267 ~L~~L~~~a~~l~~~~~~~~~~v~~LA~lVad~MGG~v~~~~~~l~~~wk~~~~~LK~~l~S~ViPIG~L~~GlcRHRAL 346 (639)
.|.+|...++.......+..+.++.|..+.-..+| +..+..++...-... |-.-+.+ +.|+|-=-|+
T Consensus 6 ~Ld~la~~v~~~~~~~~~~~~~l~al~~~l~~~~g--F~~~~~~y~~~~n~~---l~~vL~~--------r~G~Pi~L~i 72 (152)
T PF13369_consen 6 RLDALAAQVRQRLPARASPREKLEALNDVLYQELG--FSGNSENYYDPENSF---LHKVLER--------RRGIPISLAI 72 (152)
T ss_pred HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHcC--CCCCccccCChHhhh---HHHHHhc--------CCCCcHHHHH
Confidence 35556666666655555788899999999988888 321111211111111 2222222 5577777899
Q ss_pred HHHHHhhhcCCCceEecccccCCCCCCcceeEEeCCCeEEEEeCCCCCCccc
Q 042501 347 LFKVLADAIDLPCRIAKGCKYCKREDASSCLVRFGLDREYLVDLIGKPGHLC 398 (639)
Q Consensus 347 LFKvLAD~IgLPCrLVRG~~Y~~~dd~a~~~Vk~~~~reyiVDLM~~PG~L~ 398 (639)
||..+|-++||+|..|-= ..+ -++++..+.+++||.... |.+.
T Consensus 73 ly~~va~rlGl~~~~v~~------Pgh--~l~r~~~~~~~~iDpf~~-G~~l 115 (152)
T PF13369_consen 73 LYLEVARRLGLPAEPVNF------PGH--FLVRVRSDGEFYIDPFNG-GRLL 115 (152)
T ss_pred HHHHHHHHcCCeEEEEec------CCE--EEEEEecCCcEEEccCCC-CccC
Confidence 999999999999998862 222 234433244588887653 4443
No 128
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=67.47 E-value=6.2 Score=39.50 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=23.2
Q ss_pred ecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 600 IGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 600 IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
||+|+||+||++.-+ +..+|+|.+...
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~ 52 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAK 52 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehh
Confidence 699999999999865 678999998764
No 129
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=66.41 E-value=2 Score=48.38 Aligned_cols=35 Identities=31% Similarity=0.577 Sum_probs=30.0
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
.+.+.+.+|.|.||.|-++.-+ |..||||.++...
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk 90 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK 90 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh
Confidence 4567789999999999999876 8999999997654
No 130
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=65.81 E-value=3.5 Score=47.42 Aligned_cols=29 Identities=38% Similarity=0.488 Sum_probs=27.1
Q ss_pred ceecCCCceEEEEEEEC-CceEEEEEeccc
Q 042501 598 EKIGAGSFGTVHHADWH-GSDVAVKILMEQ 626 (639)
Q Consensus 598 e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~ 626 (639)
+-|++++-|.||+|.++ |..||||++++.
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPg 160 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPG 160 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCC
Confidence 67899999999999999 999999999886
No 131
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=64.06 E-value=4.4 Score=43.18 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=35.2
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
....|..+.+.+.+.+|+|||..||.+.-- +...|+|++.-.
T Consensus 14 ~tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~ 57 (302)
T KOG2345|consen 14 GTVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH 57 (302)
T ss_pred CcEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc
Confidence 456778888999999999999999988733 678999998765
No 132
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=58.10 E-value=3.2 Score=49.98 Aligned_cols=33 Identities=24% Similarity=0.538 Sum_probs=28.5
Q ss_pred CCcccccccccCccccceecCCCceEEEEEEECC
Q 042501 582 FDVDDLDIPWNDLVLKEKIGAGSFGTVHHADWHG 615 (639)
Q Consensus 582 ~s~eeweI~tsef~l~e~IGeGsFGtVYRG~wrG 615 (639)
...++|++.++ +.+.+.||+|+||+||.|.-++
T Consensus 985 yv~deWe~~r~-it~~relg~gsfg~Vy~g~~nn 1017 (1025)
T KOG4258|consen 985 YVPDEWEVSRE-ITLGRELGQGSFGMVYEGNANN 1017 (1025)
T ss_pred CChhHHHHHHH-HhhhhhhccCccceEEEecCCc
Confidence 34578999998 9999999999999999997553
No 133
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=56.16 E-value=4.4 Score=48.83 Aligned_cols=36 Identities=39% Similarity=0.452 Sum_probs=29.4
Q ss_pred cCccccceecCCCce-EEEEEEECCceEEEEEecccc
Q 042501 592 NDLVLKEKIGAGSFG-TVHHADWHGSDVAVKILMEQE 627 (639)
Q Consensus 592 sef~l~e~IGeGsFG-tVYRG~wrGt~VAVK~Lk~~d 627 (639)
.-|.-++++|.|+-| .||+|.+.|+.||||++-...
T Consensus 509 ~~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~ 545 (903)
T KOG1027|consen 509 LFFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF 545 (903)
T ss_pred eeeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh
Confidence 345556788999988 579999999999999987653
No 134
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=54.71 E-value=16 Score=37.87 Aligned_cols=36 Identities=8% Similarity=-0.068 Sum_probs=30.8
Q ss_pred ccCccccceecCCCceEEEEEEECCceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWHGSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wrGt~VAVK~Lk~~ 626 (639)
.+.+...+++|.|+||.||...-.+..+|||.+.+.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~ 65 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPK 65 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechh
Confidence 467788899999999999997666778999999764
No 135
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=53.83 E-value=8.6 Score=41.66 Aligned_cols=45 Identities=20% Similarity=0.479 Sum_probs=34.6
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHHhcC
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
+.+.+.+.+|+|.||.+-.+..+ .+.+++|-+.... ....+|.+|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~---tt~~dF~rE 70 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ---TTQADFVRE 70 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch---hhHHHHHHH
Confidence 46778889999999999999988 4689999987652 233566654
No 136
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=53.21 E-value=7.4 Score=43.01 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=33.6
Q ss_pred ccccccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
-.+..++|...+++|+|.||.|-..+-+ |.-.|||+|+..
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKe 204 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKE 204 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhh
Confidence 3456788999999999999999887766 788999999754
No 137
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=52.34 E-value=12 Score=43.91 Aligned_cols=41 Identities=20% Similarity=0.463 Sum_probs=31.4
Q ss_pred ccccccc---CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 586 DLDIPWN---DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 586 eweI~ts---ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
.|+.... ++..-+.+|+|+||.|+.+.++ ...|.||.+...
T Consensus 552 ~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~Ke 597 (772)
T KOG1152|consen 552 GCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKE 597 (772)
T ss_pred cceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhh
Confidence 3544433 3566779999999999999987 568999998654
No 138
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=50.40 E-value=2.6 Score=49.81 Aligned_cols=41 Identities=27% Similarity=0.419 Sum_probs=30.9
Q ss_pred cceecCCCceEEEEEEEC--CceEEEEEeccccccHHHHHHHhcC
Q 042501 597 KEKIGAGSFGTVHHADWH--GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 597 ~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
.-.+|-|+||.||++..+ +...|-|++... +.+.+++|+-|
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetk--seEELEDylVE 79 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETK--SEEELEDYLVE 79 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhccc--chhHHhhhhhh
Confidence 346899999999999987 445678888766 56667777644
No 139
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=49.74 E-value=6.9 Score=45.46 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=29.0
Q ss_pred CccccceecCCCceEEEEEEE--CCceEEEEEeccccc
Q 042501 593 DLVLKEKIGAGSFGTVHHADW--HGSDVAVKILMEQEF 628 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~w--rGt~VAVK~Lk~~d~ 628 (639)
-+++++.||+|.|..|-.++. .|..||||++....+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl 56 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL 56 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc
Confidence 356788999999999887764 499999999976433
No 140
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=46.76 E-value=4.6 Score=46.09 Aligned_cols=38 Identities=26% Similarity=0.325 Sum_probs=31.0
Q ss_pred ccccccCccccceecCCCceEEEEEEEC--CceEEEEEec
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILM 624 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk 624 (639)
+-+..+.|...++||+|+||+||-...+ |...|.|.|.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~ 219 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLD 219 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHH
Confidence 4566778889999999999999988776 7777777764
No 141
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=45.68 E-value=16 Score=42.59 Aligned_cols=28 Identities=39% Similarity=0.565 Sum_probs=24.5
Q ss_pred eecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 599 KIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 599 ~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
-.|+|-|++|.+|.-+ |..||||+|...
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN 468 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNN 468 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecc
Confidence 5699999999999865 889999999865
No 142
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=45.14 E-value=9.1 Score=42.15 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=27.5
Q ss_pred cCccccceecCCCceEEEEEEEC------CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH------GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr------Gt~VAVK~Lk~~ 626 (639)
..+.....||+|.||.||++.-. ....|||+++.+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~ 64 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGE 64 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhcc
Confidence 45666778999999999999543 237899999865
No 143
>PRK10941 hypothetical protein; Provisional
Probab=44.46 E-value=2.3e+02 Score=30.21 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhhcCCCCCCCCCcch---hhHHHhHHHHHhhhCCeEEEeeccccccchh
Q 042501 267 SLKELQNRVVNISCTCITTQEVVDQLAKLVCNRMGGSATTGEDDFV---PIWRECSDDIKDCLGSVVVPIGSLSIGLCRH 343 (639)
Q Consensus 267 ~L~~L~~~a~~l~~~~~~~~~~v~~LA~lVad~MGG~v~~~~~~l~---~~wk~~~~~LK~~l~S~ViPIG~L~~GlcRH 343 (639)
.|..|...|...+....+..+++++|.++.-...| +..+..+.. ..|-. +-|....| +--=
T Consensus 37 ~L~~l~~~~~~~l~~~~~~~~~l~~L~~~fy~~lg--F~Gn~~~Y~~p~ns~L~--~VL~~R~G------------~Pis 100 (269)
T PRK10941 37 ELERLVSLAREEISQLLPQDEQLEKLIALFYGEWG--FGGASGVYRLSDALWLD--KVLKTRQG------------SAVS 100 (269)
T ss_pred HHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhC--CCCCccccCCchhhHHH--HHHHccCC------------CcHH
Confidence 45566666666665555788999999999988887 321222221 22221 22333333 3333
Q ss_pred hHHHHHHHhhhcCCCceEecccccCCCCCCcceeEEe--CCCeEEEEeCCCCCCcccCCCC
Q 042501 344 RTLLFKVLADAIDLPCRIAKGCKYCKREDASSCLVRF--GLDREYLVDLIGKPGHLCVPDS 402 (639)
Q Consensus 344 RALLFKvLAD~IgLPCrLVRG~~Y~~~dd~a~~~Vk~--~~~reyiVDLM~~PG~L~~~dS 402 (639)
=|+||-.+|-++|||..-|== .. .-++|+ .++..|+||-.. |...-...
T Consensus 101 L~il~l~iA~~lglp~~gV~f------Pg--hfllr~~~~d~~~~~IDPf~--G~~L~~~~ 151 (269)
T PRK10941 101 LGAILLWIANRLDLPLMPVIF------PT--QLILRADWLDGEMWLINPFN--GETLDEHT 151 (269)
T ss_pred HHHHHHHHHHHcCCCeeeeec------Cc--hheeeeecCCCceEEEeCCC--CCCCCHHH
Confidence 489999999999999876631 11 135665 345578899855 87554433
No 144
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=44.29 E-value=6.5 Score=44.08 Aligned_cols=35 Identities=34% Similarity=0.383 Sum_probs=29.3
Q ss_pred cCccccceecCCCceEEEEEEEC-----CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH-----GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr-----Gt~VAVK~Lk~~ 626 (639)
+.+...++||+|.|++||++... ...||+|.+...
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t 75 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT 75 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc
Confidence 45677889999999999999865 358999999764
No 145
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=43.88 E-value=14 Score=42.94 Aligned_cols=36 Identities=28% Similarity=0.223 Sum_probs=29.1
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
...+..-++||+|+-|.||-+.-. +..||||++...
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~ 309 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR 309 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEec
Confidence 345666779999999999999755 679999998653
No 146
>PF02809 UIM: Ubiquitin interaction motif; InterPro: IPR003903 The Ubiquitin Interacting Motif (UIM), or 'LALAL-motif', is a stretch of about 20 amino acid residues, which was first described in the 26S proteasome subunit PSD4/RPN-10 that is known to recognise ubiquitin [,]. In addition, the UIM is found, often in tandem or triplet arrays, in a variety of proteins either involved in ubiquitination and ubiquitin metabolism, or known to interact with ubiquitin-like modifiers. Among the UIM proteins are two different subgroups of the UBP (ubiquitin carboxy-terminal hydrolase) family of deubiquitinating enzymes, one F-box protein, one family of HECT-containing ubiquitin-ligases (E3s) from plants, and several proteins containing ubiquitin-associated UBA and/or UBX domains []. In most of these proteins, the UIM occurs in multiple copies and in association with other domains such as UBA (IPR015940 from INTERPRO), UBX (IPR001012 from INTERPRO), ENTH, EH (IPR000261 from INTERPRO), VHS (IPR002014 from INTERPRO), SH3 (IPR001452 from INTERPRO), HECT (IPR000569 from INTERPRO), VWFA (IPR002035 from INTERPRO), EF-hand calcium-binding, WD-40 (IPR001680 from INTERPRO), F-box (IPR001810 from INTERPRO), LIM (IPR001781 from INTERPRO), protein kinase (IPR000719 from INTERPRO), ankyrin (IPR002110 from INTERPRO), PX (IPR001683 from INTERPRO), phosphatidylinositol 3- and 4-kinase (IPR000403 from INTERPRO), C2 (IPR000008 from INTERPRO), OTU (IPR003323 from INTERPRO), dnaJ (IPR001623 from INTERPRO), RING-finger (IPR001841 from INTERPRO) or FYVE-finger (IPR017455 from INTERPRO). UIMs have been shown to bind ubiquitin and to serve as a specific targeting signal important for monoubiquitination. Thus, UIMs may have several functions in ubiquitin metabolism each of which may require different numbers of UIMs [, , ]. The UIM is unlikely to form an independent folding domain. Instead, based on the spacing of the conserved residues, the motif probably forms a short alpha-helix that can be embedded into different protein folds []. Some proteins known to contain an UIM are listed below: Eukaryotic PSD4/RPN-10/S5, a multi-ubiquitin binding subunit of the 26S proteasome. Vertebrate Machado-Joseph disease protein 1 (Ataxin-3), which acts as a histone-binding protein that regulates transcription; defects in Ataxin-3 cause the neurodegenerative disorder Machado-Joseph disease (MJD). Vertebrate epsin and epsin2. Vertebrate hepatocyte growth factor-regulated tyrosine kinase substrate (HRS). Mammalian epidermal growth factor receptor substrate 15 (EPS15), which is involved in cell growth regulation. Mammalian epidermal growth factor receptor substrate EPS15R. Drosophila melanogaster (Fruit fly) liquid facets (lqf), an epsin. Yeast VPS27 vacuolar sorting protein, which is required for membrane traffic to the vacuole. ; PDB: 2KDE_A 2KDF_A 1YX6_A 1YX5_A 1YX4_A 1P9C_A 1UEL_B 1P9D_S 2KLZ_A.
Probab=43.03 E-value=22 Score=23.16 Aligned_cols=14 Identities=43% Similarity=0.536 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHhh
Q 042501 149 EESYQLQLALALRL 162 (639)
Q Consensus 149 eE~yqlQLalalr~ 162 (639)
+|+-+||+||++++
T Consensus 2 ~Ed~~L~~Al~~S~ 15 (18)
T PF02809_consen 2 DEDEDLQRALEMSL 15 (18)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhh
Confidence 57889999998865
No 147
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=42.94 E-value=7.1 Score=41.43 Aligned_cols=45 Identities=27% Similarity=0.481 Sum_probs=34.4
Q ss_pred CCccccccccc---CccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 582 FDVDDLDIPWN---DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 582 ~s~eeweI~ts---ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
++.+...|.|. ++.+.+++|+|.|++||.|..- ...+.||+|++-
T Consensus 25 WdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV 74 (338)
T KOG0668|consen 25 WDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV 74 (338)
T ss_pred cchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH
Confidence 44555566665 4556779999999999999843 678999999874
No 148
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=40.50 E-value=8.3 Score=42.72 Aligned_cols=43 Identities=21% Similarity=0.241 Sum_probs=35.9
Q ss_pred ccccccccCccccceecCCCceEEEEEEEC--CceEEEEEecccc
Q 042501 585 DDLDIPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQE 627 (639)
Q Consensus 585 eeweI~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~d 627 (639)
..|.+...+|.+.++||+|+|..|-.+.+. .+..|+|+++...
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel 287 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKEL 287 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHh
Confidence 347777889999999999999999988887 4678999987543
No 149
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=40.40 E-value=14 Score=43.22 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=40.8
Q ss_pred ccccccCccccceecCCCceEEEEEEEC-CceEEEEEeccccccHHHHHHHhcC
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWH-GSDVAVKILMEQEFHAERFKEFLRE 639 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~d~s~q~~~eFl~E 639 (639)
+.|.-.++.+.++||+||...||+...- .+.+|+|++.....+.+.+.-|++|
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nE 409 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNE 409 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHH
Confidence 5566778888899999999999999866 3578888876554556667777665
No 150
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=40.33 E-value=21 Score=43.14 Aligned_cols=40 Identities=23% Similarity=0.378 Sum_probs=28.6
Q ss_pred ccccccCccccceecCCCceEEEEEEECC--ceEEEEEeccc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWHG--SDVAVKILMEQ 626 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wrG--t~VAVK~Lk~~ 626 (639)
++-..++-...-++|+|.||+||.|+-.. ..+|||-+...
T Consensus 570 feYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpek 611 (1226)
T KOG4279|consen 570 FEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEK 611 (1226)
T ss_pred EEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccc
Confidence 33334444445589999999999998663 46799998754
No 151
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=37.89 E-value=24 Score=41.07 Aligned_cols=30 Identities=43% Similarity=0.566 Sum_probs=27.0
Q ss_pred cceecCCCceEEEEEEEC-CceEEEEEeccc
Q 042501 597 KEKIGAGSFGTVHHADWH-GSDVAVKILMEQ 626 (639)
Q Consensus 597 ~e~IGeGsFGtVYRG~wr-Gt~VAVK~Lk~~ 626 (639)
.+-||.-+.|.||+|+++ |..||||+.++.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~ 196 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG 196 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence 467899999999999999 899999999875
No 152
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=37.15 E-value=25 Score=39.88 Aligned_cols=41 Identities=22% Similarity=0.393 Sum_probs=34.6
Q ss_pred ccccccCccccceecCCCceEEEEEEECC--ceEEEEEecccc
Q 042501 587 LDIPWNDLVLKEKIGAGSFGTVHHADWHG--SDVAVKILMEQE 627 (639)
Q Consensus 587 weI~tsef~l~e~IGeGsFGtVYRG~wrG--t~VAVK~Lk~~d 627 (639)
-.+..+.|.+-+.||.|.-|+||.+.+++ ...|+|++....
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~ 114 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKES 114 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHH
Confidence 34556788889999999999999999996 689999997653
No 153
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=36.33 E-value=43 Score=34.49 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=30.1
Q ss_pred cCccccceecCCCc-eEEEEEEECCceEEEEEec
Q 042501 592 NDLVLKEKIGAGSF-GTVHHADWHGSDVAVKILM 624 (639)
Q Consensus 592 sef~l~e~IGeGsF-GtVYRG~wrGt~VAVK~Lk 624 (639)
.+|..-+.||.|.. |.|||....|...|+|+.+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~ 70 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFR 70 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEee
Confidence 67888899999999 9999999999999999943
No 154
>PRK15047 N-hydroxyarylamine O-acetyltransferase; Provisional
Probab=36.21 E-value=57 Score=34.77 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=40.6
Q ss_pred ccccchhhHHHHHHHhhhcCCCceEecccccCCC------CCCcceeEEeCCCeEEEEeC
Q 042501 337 SIGLCRHRTLLFKVLADAIDLPCRIAKGCKYCKR------EDASSCLVRFGLDREYLVDL 390 (639)
Q Consensus 337 ~~GlcRHRALLFKvLAD~IgLPCrLVRG~~Y~~~------dd~a~~~Vk~~~~reyiVDL 390 (639)
+=|.|.+-..||..+=-.+|..++++.|.-+... -.+...+|.+ ++..||||.
T Consensus 65 RGGyCfE~N~Lf~~~L~~LGF~v~~~~arV~~~~~~~~~~~tH~~l~V~i-~~~~yLvDV 123 (281)
T PRK15047 65 RGGYCFEQNGLFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVEL-EGEKWIADV 123 (281)
T ss_pred CCEEcHhHHHHHHHHHHHcCCcEEEEEEEEEecCCCCCCCcCcEEEEEEE-CCeeEEEEe
Confidence 6699999999999999999998888887644221 1244556777 566999995
No 155
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=36.20 E-value=1.8 Score=46.16 Aligned_cols=35 Identities=34% Similarity=0.426 Sum_probs=26.8
Q ss_pred ccccCccccceecCCCceEEEEEEEC--CceEEEEEe
Q 042501 589 IPWNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKIL 623 (639)
Q Consensus 589 I~tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~L 623 (639)
+.-+...-..+||+|.||+||++..+ |..||+|++
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkv 50 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKV 50 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHH
Confidence 33444555679999999999999876 678887765
No 156
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=36.18 E-value=12 Score=41.81 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=29.2
Q ss_pred ccCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 591 WNDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 591 tsef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
.+.+.+...+|+|.||.|-...-+ +..||||+++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~ 124 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN 124 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH
Confidence 566777889999999999887655 67999999875
No 157
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=29.10 E-value=27 Score=38.06 Aligned_cols=33 Identities=33% Similarity=0.469 Sum_probs=25.5
Q ss_pred CccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
++.-.+-||-|+||.||-..-. |..||.|++..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn 88 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN 88 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcch
Confidence 3445678999999999976654 78899888753
No 158
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=28.21 E-value=61 Score=37.70 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=29.0
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEeccc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILMEQ 626 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~~ 626 (639)
..+++.++||=|.|.|||.+.-. .+-||+|+.+..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA 114 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA 114 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh
Confidence 46677889999999999998643 568999999864
No 159
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=26.10 E-value=12 Score=42.84 Aligned_cols=34 Identities=32% Similarity=0.260 Sum_probs=26.3
Q ss_pred cCccccceecCCCceEEEEEEEC--CceEEEEEecc
Q 042501 592 NDLVLKEKIGAGSFGTVHHADWH--GSDVAVKILME 625 (639)
Q Consensus 592 sef~l~e~IGeGsFGtVYRG~wr--Gt~VAVK~Lk~ 625 (639)
+.+-+.+.+|+|+|.+||++.-- ..-||||+...
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHql 498 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQL 498 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehh
Confidence 34456678999999999999744 56799998654
No 160
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=24.34 E-value=18 Score=42.65 Aligned_cols=27 Identities=41% Similarity=0.458 Sum_probs=22.0
Q ss_pred CccccceecCCCceEEEEEEEC--CceEE
Q 042501 593 DLVLKEKIGAGSFGTVHHADWH--GSDVA 619 (639)
Q Consensus 593 ef~l~e~IGeGsFGtVYRG~wr--Gt~VA 619 (639)
-+...++||+|+|-+||||.-. |..||
T Consensus 41 y~k~~evLGrGafKtVYka~De~~giEVA 69 (632)
T KOG0584|consen 41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVA 69 (632)
T ss_pred eeehhhhcccccceeeeeccccccchhhH
Confidence 3556789999999999999865 66776
No 161
>PRK04031 DNA primase; Provisional
Probab=22.38 E-value=2.3e+02 Score=32.26 Aligned_cols=106 Identities=17% Similarity=0.222 Sum_probs=72.7
Q ss_pred CHhhhhcCCCCCCCcccEEEEcCCCChhHHHHHHHHHHHhhcC-----CCHHHHHHHHHHHHH----hhcCC------CC
Q 042501 240 SIESLRSVDPSSDSLIEVVLIDRRSDPSLKELQNRVVNISCTC-----ITTQEVVDQLAKLVC----NRMGG------SA 304 (639)
Q Consensus 240 sLe~L~a~~~~~~~~~EVILVDr~~D~~L~~L~~~a~~l~~~~-----~~~~~~v~~LA~lVa----d~MGG------~v 304 (639)
+||.+-.++|+ .+.++|+=|.--+=..-+.++++|.++...+ .+..++++.+-+-|- -.||+ +.
T Consensus 87 ~lEtIdRVGPc-~A~i~v~~IeDvR~~Kr~~IveRAkeil~~~~~e~~~~s~ei~~ev~e~vr~~ei~eyg~ekL~Agp~ 165 (408)
T PRK04031 87 ALETIDRVGPC-RAKIEVTEIEDVRAEKRKKIVERAKEILKKWFDEKVPDSKEIIEEVREAVRVEEITEYGPEKLPAGPN 165 (408)
T ss_pred HHhhhhccccc-eeEEEEEEeeehHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHHHHHhhhccceeecccccccCcc
Confidence 57788888999 9999999888777888999999999998764 367788877777763 13444 11
Q ss_pred CCCCCc--chhhHHHhHHHHHhhhCCeEEEeeccccccchhhHHHHH
Q 042501 305 TTGEDD--FVPIWRECSDDIKDCLGSVVVPIGSLSIGLCRHRTLLFK 349 (639)
Q Consensus 305 ~~~~~~--l~~~wk~~~~~LK~~l~S~ViPIG~L~~GlcRHRALLFK 349 (639)
-...+. +..-|...+.-+++-....|-..|. .+..|=.-|+|
T Consensus 166 i~k~~~iIVVEG~~DVi~L~~aGi~nvVAt~GT---~l~~~i~~l~k 209 (408)
T PRK04031 166 VDDSDAIIVVEGRADVLNLLRYGIKNAIAVEGT---NVPETIIELSK 209 (408)
T ss_pred cccCCeEEEEeCHHHHHHHHhcccceEEEeCCc---ccHHHHHHHhc
Confidence 000111 2344666776777777777778887 46666444444
Done!