BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042503
(477 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/477 (70%), Positives = 394/477 (82%), Gaps = 1/477 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IER ILRLLHGR TRT L +IHAHFLRH L+Q N IL+HFVS+CG+LN++ YA +IF Q
Sbjct: 8 IERNILRLLHGRETRTQLREIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQT 67
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+NP+++LFN+MIK YSLNGP EE +LF+ +KN GIWPDEYT APLLKAC +G L++G+
Sbjct: 68 QNPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGK 127
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
C+H E++ GFE F +IRIGV+ELY+SCG M+D KVFDEM RDVIV NLMIHGFCK+G
Sbjct: 128 CMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRG 187
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DVD GL LFR+MR+RSVVSWN+MIS L +S RDSEAL LFH+M D F+ DEATVV VLP
Sbjct: 188 DVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLP 247
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
ICARLG+VD+G+WIHSYA+SSGLYR V+VGNALVDFY K G+ +TAR VF E+PRKNV+
Sbjct: 248 ICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVI 307
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN +ISGLA NG GELGVEL E+M+ +GV PN ATFVGVL+CCAHAGL E+ REL ASM
Sbjct: 308 SWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASM 367
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM-SIRPNAAIWGSLLSSCRTHGHVE 419
H I P LEHYGCMVD+LGRSGCVREAYDLIR M PNAA+WGSLLS+CRTHG VE
Sbjct: 368 VEHHQIEPKLEHYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVE 427
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LA AVKELI+LEPWNSGNYVLLSN+YAE RWD +R MRE NVKK+PGQS+I
Sbjct: 428 LAHLAVKELIDLEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/475 (67%), Positives = 390/475 (82%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
ER+ILR LHGR TRT L QIHAH LRH LHQSN IL+HF+SVCG L+++ YA +F+Q +
Sbjct: 9 ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP++LLFNSMIK YSL GPSE + LF+ +KN GIWPDE+TFAPLLK+C G+ D R+G+
Sbjct: 69 NPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKG 128
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG +I GFERF SIRIG+++LYTSCG+M+D KVFDEM RDVIV N+MI GFCK GD
Sbjct: 129 VHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGD 188
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ G LFR+MR+RSVVSWN MI+ L +SGRD EAL LF EM D FE D+ATVV +LP+
Sbjct: 189 IEMGFRLFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPV 248
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CARLGAVD+G+WIHSYAESS L R +SVGN+LVDFYCKCGIL+TA VF E+P+KNVVS
Sbjct: 249 CARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVS 308
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WNAMISGL FNG+GELG +L+E+MI KGV PN ATFVGVL+CCAHAGLVE+ R LF SMT
Sbjct: 309 WNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMT 368
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + P LEH+GCMVD+L R+GC+ EA DL+R+M +RPNA +WGSLLS+ RT G V+ A
Sbjct: 369 VDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHA 428
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E AVKELI LEPWNSGNYVLLSN+YAE G+WD+ E +R M+E N++K+PGQS++
Sbjct: 429 ECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/475 (64%), Positives = 371/475 (78%), Gaps = 26/475 (5%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
ER+ILR LHGR TRT L QIHAH LRH LHQSN IL+HF+SVCG L+++ YA +F+Q +
Sbjct: 9 ERRILRHLHGRKTRTQLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQ 68
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP++LLFNSMIK YSL GPSE + LF+ +KN GIWPDE+TFAPLLK+C G+ D R+G+
Sbjct: 69 NPNLLLFNSMIKGYSLCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKG 128
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG +I GFERF SIRIG+++LYTSCG+M+D KVFDEM
Sbjct: 129 VHGVVIVVGFERFSSIRIGIIDLYTSCGRMEDAKKVFDEM-------------------- 168
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
L R+MR+RSVVSWN MI+ L +SGRD EAL LF EM D FE D+ATVV +LP+
Sbjct: 169 ------LDRDMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPV 222
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CARLGAVD+G+WIHSYAESS L R +SVGN+LVDFYCKCGIL+TA VF E+P+KNVVS
Sbjct: 223 CARLGAVDVGEWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVS 282
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WNAMISGL FNG+GELG +L+E+MI KGV PN ATFVGVL+CCAHAGLVE+ R LF SMT
Sbjct: 283 WNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMT 342
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + P LEH+GCMVD+L R+GC+ EA DL+R+M +RPNA +WGSLLS+ RT G V+ A
Sbjct: 343 VDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHA 402
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E AVKELI LEPWNSGNYVLLSN+YAE G+WD+ E +R M+E N++K+PGQS++
Sbjct: 403 ECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 457
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 286/474 (60%), Positives = 370/474 (78%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IER+ILRLLHG +RTHLTQIHAHFLRH LHQSN ILAHF+SVC + N I YA ++F+Q
Sbjct: 8 IERRILRLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQS 67
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NP++ LFNS+IKA+SL+ P + + LF+ +KN I PD+YTFAPLLK+C + + +GQ
Sbjct: 68 HNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQ 127
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
CV E+ R GF FGSIRIGVVELY C +M+D K+FDEMSHRDV+V NLMI GFCK G
Sbjct: 128 CVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTG 187
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+VD GL LFR+M ERS+VSWN +IS L ++ RD EAL LF +M + F+ DE TVV +LP
Sbjct: 188 NVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLP 247
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
+C+RLGA+++GQ IHSYA S G + +VGN+L+DFYCKCG ++ A N+F+++ K+VV
Sbjct: 248 VCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVV 307
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN +I G A NG+GE ++L+ +M + + PN ATFV VLT C H+GL+EK RELF+SM
Sbjct: 308 SWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSM 367
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P LEH+GCMVD+LGR GCV EA+ LI+SM ++PNA +WG++L +CRTHG+++L
Sbjct: 368 AEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKL 427
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
AE AVKELI+LEPWNSGNYVLLSN+ AE GRW++ E +R WMRE +VKK+PGQS
Sbjct: 428 AEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 288/477 (60%), Positives = 369/477 (77%), Gaps = 1/477 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IERK+LRLLHG NTRT L +IHAH LRH LH SNL+LAHF+S+CG+L+ YA ++F+ +
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+NP+VL+FN+MIK YSL GP E + F+ +K+ GIW DEYT+APLLK+C + DLR G+
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
CVHGE+IR+GF R G IRIGVVELYTS G+M D KVFDEMS R+V+V NLMI GFC G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DV++GL+LF++M ERS+VSWN MISSL K GRD EAL LF EM DQ F+ DEATVV VLP
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
I A LG +D G+WIHS AESSGL++ ++VGNALVDFYCK G L+ A +F+++ R+NVV
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV 302
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFAS 359
SWN +ISG A NG+GE G++L++ MI +G V+PN+ATF+GVL CC++ G VE+ ELF
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGL 362
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + EHYG MVD++ RSG + EA+ +++M + NAA+WGSLLS+CR+HG V+
Sbjct: 363 MMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVK 422
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LAE A EL+ +EP NSGNYVLLSN+YAE GRW D E +R M++N ++KS GQS I
Sbjct: 423 LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 282/474 (59%), Positives = 360/474 (75%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IERKILRLLHG TR+HLT+IH HFLRH L QSN ILAHFVSVC +L + YAT++F
Sbjct: 7 IERKILRLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHT 66
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NP++LLFN++IKA+SL+ P F+L+K I PDEYT APL K+ + +G
Sbjct: 67 HNPNILLFNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGG 126
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
CVH ++R GF R S+R+ +E+Y SC +M D KVFDEM DV+V NLMI GFCK G
Sbjct: 127 CVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKMG 186
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D++ G+ +F +M+ER+VVSWNLM+S L K+ ++ +AL LF+EM +Q FE D+A++V VLP
Sbjct: 187 DLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLP 246
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
+CARLGAVDIG+WIHSYA S G + ++VGN+LVDFYCKCG L A ++F ++ KNVV
Sbjct: 247 VCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVV 306
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNAMISGLA+NG GE+GV L+E+M+ G PN +TFVGVL CCAH GLV++ R+LFASM
Sbjct: 307 SWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASM 366
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ + P LEHYGC+VD+LGR G VREA DLI SM ++P AA+WG+LLS+CRT+G E+
Sbjct: 367 SVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREI 426
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
AE+A KEL+ LEPWNSGNYVLLSN+YAE GRWD+ E +R+ MR VKK PGQS
Sbjct: 427 AENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/478 (60%), Positives = 364/478 (76%), Gaps = 1/478 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IE KIL LLH T+THL QIHAHFLRH LH SN IL+HFVSVC +L++I YAT IFN
Sbjct: 8 IESKILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHT 67
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK-NLGIWPDEYTFAPLLKACLGVGDLRVG 119
+P++LLFNS+IKA+S P + F L+K I PD +TF PLLKA + D +G
Sbjct: 68 HHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLG 127
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
QC+H + GF R + IG++E+Y++CG+M+D KVFDEM HR+V+V N+MI+GFCK
Sbjct: 128 QCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKM 187
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GD++ GL LF+ M +RSVVSWNLMIS L + +D EA +F EM +Q FE D+AT+V VL
Sbjct: 188 GDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVL 247
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P+CARLG VD G+WIHSYA+ GL RKV+SVGN+LVDFYCKCG L+ A VF E+ +KNV
Sbjct: 248 PVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNV 307
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSWNAMISGL NG+GELGVEL+E+M KGV+P+ +TFVGVL CCAHAG V+K RE+F S
Sbjct: 308 VSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDS 367
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
MT + P LEHYGC+VD+LGR G V+EAYDLIR+M + PNAA+WG+LLS+CRTHG E
Sbjct: 368 MTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDRE 427
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE A KEL+ LEP NSGNYVLLSN+YAE +W++ E +R+ M+ +KK+PGQS ++
Sbjct: 428 VAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 239/420 (56%), Positives = 309/420 (73%), Gaps = 11/420 (2%)
Query: 66 LLFNSMIKAYSLN--------GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
L+F M+K N GP + + F+ +K+ GIW DEYT+APLLK+C + DLR
Sbjct: 584 LVFKQMLKWLPANQRHLHMAAGP--KSLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLR 641
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+CVHGE+IR+GF R G +RIGVVELYTS G+M D KVFDEM R+V+V NLM+ GFC
Sbjct: 642 FGKCVHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFC 701
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
GDV +GL F++M ERS+VSWN MISSL K GRD EAL LF EM DQ F+ DEATVV
Sbjct: 702 DSGDVQRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 761
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+LPI A LG +D G+WIHS AES+GL + ++VGNALVDFYCK G L+ A +F+++ R+
Sbjct: 762 MLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 821
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKAREL 356
NVVSWN MISG A NG+GE G++L++ MI +G V+PN+ATF+GVL CC++ G VE+ EL
Sbjct: 822 NVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 881
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + P EHYG MVD++ RSG +REA++ +R+M + NAA+WGSLLS+CR+HG
Sbjct: 882 FGLMMERFKLEPRTEHYGAMVDLMSRSGRIREAFEFLRNMPVNANAAMWGSLLSACRSHG 941
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
V+LAE A EL+ +EP NSGNYVLLSN+YAE GRW D E +R M++N ++K+ GQS I
Sbjct: 942 DVKLAELAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNCLRKTTGQSTI 1001
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 17/347 (4%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +R H+ + V + + + A K+F++M +V+++N M++ + +G
Sbjct: 646 VHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVFDEMPERNVVVWNLMVRGFCDSGD 705
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ + F + I ++ ++ + G R + E+I GF+ + +
Sbjct: 706 VQRGLSFFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 761
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVI-----VRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ + S G +D G + +I V N ++ +CK GD++ +FR+M+ R
Sbjct: 762 MLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR 821
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWI 254
+VVSWN MIS +G+ + LF M ++ +EAT + VL C+ G V+ G+ +
Sbjct: 822 NVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 881
Query: 255 HS-YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFN 312
E L + G A+VD + G + A + +P N W +++S +
Sbjct: 882 FGLMMERFKLEPRTEHYG-AMVDLMSRSGRIREAFEFLRNMPVNANAAMWGSLLSACRSH 940
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL---VEKAREL 356
G +L EL + K N +V + A G VEK R L
Sbjct: 941 GDVKLA-ELAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTL 986
>gi|255542868|ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548458|gb|EEF49949.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 459
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/292 (67%), Positives = 235/292 (80%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IERKIL+LLHG NTRT L QIHAHFLRH L Q N ILAHF+SVCG+ N++ YA ++F Q
Sbjct: 166 IERKILKLLHGHNTRTQLRQIHAHFLRHGLDQLNHILAHFISVCGSENKMPYANRVFLQS 225
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NP++L FN+M+K YSL GP EE + F+ +K GIWPDEYTFAPLLKAC + DL++GQ
Sbjct: 226 VNPNILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYTFAPLLKACSSLYDLKLGQ 285
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
C+H ++I GFE F SI+IGVVELY +CG ++D KVFDEM RD IV NLMI G+C++G
Sbjct: 286 CIHKDVIMIGFECFCSIQIGVVELYANCGLLEDSKKVFDEMRERDSIVWNLMIRGYCRRG 345
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DV+ GLYLFR+M ERSVVSWN+MIS L +SGRDSEALRLFHEM+D+ F+ DEATVV VLP
Sbjct: 346 DVNMGLYLFRKMSERSVVSWNIMISCLAQSGRDSEALRLFHEMQDEGFKPDEATVVTVLP 405
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
ICARL AV +GQWI SYAES+GLY VSVGNALVDFY KCG+L+TAR K
Sbjct: 406 ICARLEAVSVGQWIQSYAESTGLYGDFVSVGNALVDFYSKCGMLETARRDLK 457
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 34/202 (16%)
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+++ +N M+ G E+L F M+ + DE T +L C+ L + +GQ IH
Sbjct: 229 NILPFNAMVKGYSLCGPFEESLSFFSSMKRRGIWPDEYTFAPLLKACSSLYDLKLGQCIH 288
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI--------------------- 294
G + S+ +V+ Y CG+L+ ++ VF E+
Sbjct: 289 KDVIMIG-FECFCSIQIGVVELYANCGLLEDSKKVFDEMRERDSIVWNLMIRGYCRRGDV 347
Query: 295 ----------PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
++VVSWN MIS LA +GR + L+ +M +G P++AT V VL C
Sbjct: 348 NMGLYLFRKMSERSVVSWNIMISCLAQSGRDSEALRLFHEMQDEGFKPDEATVVTVLPIC 407
Query: 345 AHAGLVEKAR--ELFASMTGLH 364
A V + + +A TGL+
Sbjct: 408 ARLEAVSVGQWIQSYAESTGLY 429
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/465 (41%), Positives = 301/465 (64%), Gaps = 4/465 (0%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
T L +IHAH ++ L QSN ++ + C L + YAT +F Q+ +P++ +N++I+ Y
Sbjct: 24 TQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTY 83
Query: 76 SLNGPSEEPVKLFALL---KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ N + +F + ++PD++TF ++K+C G+ R+G VHG + + G +
Sbjct: 84 AHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGAD 143
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
++++YT G + + KVF+EMSHRDVI N +I G+ K G ++ LF +M
Sbjct: 144 FHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDM 203
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R++VSW MI+ G+ G +AL +F EM+ E DE +++AVLP CA+LGA+++G+
Sbjct: 204 PVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGK 263
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
WIH YA+ +G RK + NAL++ Y KCG +D A N+F ++ K+V+SW+ MI GLA +
Sbjct: 264 WIHMYADKNGFLRKT-GICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANH 322
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G+G ++L+E+M V+PN+ TF+GVL C+H GL ++ + F M+ + I P +EH
Sbjct: 323 GKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEH 382
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGC++D+LGRSGC+ +A D I M I+P++ IW SLLSSCR H ++++A AVK+L+ LE
Sbjct: 383 YGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELE 442
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P SGNYVLL+N+YAE G+W+D +R +R +KK+PG S IE
Sbjct: 443 PEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIE 487
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/474 (42%), Positives = 285/474 (60%), Gaps = 1/474 (0%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R LLH + L Q+HAH L+ S+L L+ SVC + YA IF +
Sbjct: 16 RPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDA 75
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
V +N+ +++++ + + LF L+ I PD YT + +LKAC + D+R G+ V
Sbjct: 76 SEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIV 135
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG + + G + ++ +V LY CG++ KVFD+M RDVI N+MI K GD
Sbjct: 136 HGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDA 195
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ LF EM ER+V SW MI + G+ EA+ LF EM D +E TVVAVL C
Sbjct: 196 EGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVAC 255
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A +G + +G+ IH ++ SG Y K + V N L+D Y KCG L+ A +F + + VVSW
Sbjct: 256 ADMGNLVLGRRIHDFSNRSG-YEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSW 314
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI+GLA +GR E + L+ +MI GV PN TF+G+L C+H G+VEK R+ FASMT
Sbjct: 315 SAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ IVP +EHYGCMVD+ R+G ++EA++ I +M I PN +WG+LL C+ H +++LAE
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAE 434
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
A + L L+P N G YV+LSNIYAE GRW+D +R MR+ VKK+PG S I
Sbjct: 435 EATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSI 488
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 288/473 (60%), Gaps = 3/473 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN--QMRNP 63
+ LL N+ L Q+HA ++ S L L VC YA +IF + + P
Sbjct: 32 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKP 91
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++NS +KA + + + LF L+ + PD +T + +L+ACL + DL G+ +H
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 151
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G + + GF ++ +V LY SCG+M + +F++M RDV+ N+MI K+GD +
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHE 211
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF M ER+V SW MI+ + G+ EA+ LF +M + + +E TVVAVL CA
Sbjct: 212 GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACA 271
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LGA+D+G IH Y+ G +++ V + N L+D Y KCG L+ A VF+E+ + VVSW+
Sbjct: 272 DLGALDLGMRIHEYSNRHG-FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWS 330
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI GLA +GR E + L+ M G+ PN TF+G+L C+H GL+ + R FASMT
Sbjct: 331 AMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 390
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ I+P +EHYGCMVD+L R+G + EA++ I +M ++PN +WG+LL +CR H +VE+AE
Sbjct: 391 YGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
A+K L+ L+P N G YV+LSNIYAE GRW+D +R +M++ VKK+PG S I
Sbjct: 451 AIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 503
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/473 (41%), Positives = 288/473 (60%), Gaps = 3/473 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN--QMRNP 63
+ LL N+ L Q+HA ++ S L L VC YA +IF + + P
Sbjct: 32 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKP 91
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++NS +KA + + + LF L+ + PD +T + +L+ACL + DL G+ +H
Sbjct: 92 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 151
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G + + GF ++ +V LY SCG+M + +F++M RDV+ N+MI K+GD +
Sbjct: 152 GVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHE 211
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF M ER+V SW MI+ + G+ EA+ LF +M + + +E TVVAVL CA
Sbjct: 212 GAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACA 271
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LGA+D+G IH Y+ G +++ V + N L+D Y KCG L+ A VF+E+ + VVSW+
Sbjct: 272 DLGALDLGMRIHEYSNRHG-FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWS 330
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI GLA +GR E + L+ M G+ PN TF+G+L C+H GL+ + R FASMT
Sbjct: 331 AMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRD 390
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ I+P +EHYGCMVD+L R+G + EA++ I +M ++PN +WG+LL +CR H +VE+AE
Sbjct: 391 YGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEE 450
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
A+K L+ L+P N G YV+LSNIYAE GRW+D +R +M++ VKK+PG S I
Sbjct: 451 AIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 503
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/478 (39%), Positives = 295/478 (61%), Gaps = 2/478 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + + L L +IHAH ++ L QSN ++ + +C L+ + YAT IF Q+
Sbjct: 6 LENRFVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQL 65
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V +N++I+ Y+ N + +F +L PD++TF ++K+C G+ R+G
Sbjct: 66 ENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLG 125
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
Q VH + + G + ++++YT CG M +V++EM+ RD + N +I G +
Sbjct: 126 QQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRL 185
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G + +F EM R++VSW MI+ + G ++AL +F EM+ E DE +V++VL
Sbjct: 186 GQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVL 245
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P CA+LGA+++G+WIH Y+E SG + K V NALV+ Y KCG +D A +F ++ K+V
Sbjct: 246 PACAQLGALEVGKWIHKYSEKSG-FLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDV 304
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW+ MI GLA +G+G + ++E M GV+PN TFVGVL+ CAHAGL + F
Sbjct: 305 ISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDV 364
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + + P +EHYGC+VD+LGRSG V +A D I M ++P++ W SLLSSCR H ++E
Sbjct: 365 MRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLE 424
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A A+++L+ LEP SGNYVLL+NIYA+ +W+ +R +R +KK+PG SLIE
Sbjct: 425 IAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIE 482
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 300/467 (64%), Gaps = 10/467 (2%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +IHAH ++ L QS+ ++ V VC E +YA +F ++ +P+ L+N+MI+AY
Sbjct: 30 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKH 89
Query: 78 NGPSEEPVKLFALLKNLG-------IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
N + ++ + LG I+PD++TF ++K+C G+ +G+ VHG + + G
Sbjct: 90 NKVYVLAITVYKQM--LGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFG 147
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ + +VE+Y C +DD KVF+EM+ RD + N +I G + G + + +F
Sbjct: 148 QKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFE 207
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
EM+++++ SW ++S + G ++AL F M+ E DE ++V+VLP CA+LGA+++
Sbjct: 208 EMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALEL 267
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIH YA+ +G R + V NAL++ Y KCG +D R +F ++ ++V+SW+ MI GLA
Sbjct: 268 GKWIHFYADKAGFLRNIC-VCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLA 326
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+GR +EL+++M + PN TFVG+L+ CAHAGL+ + F SM ++I P +
Sbjct: 327 NHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGV 386
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGC+V++LG SG + +A +LI+ M ++P++AIWGSLLSSCR+H ++E+A A++ L+
Sbjct: 387 EHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLE 446
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP ++GNYVLLSN+YA+ G+WD +R MR ++KK+PG S IE
Sbjct: 447 LEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIE 493
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/478 (39%), Positives = 298/478 (62%), Gaps = 2/478 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L +R +IHA + H L QS+ ++ V +C L ++ YAT++FNQ+
Sbjct: 9 VENYFIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQV 68
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V L+NS+I+AY+ N + ++++ LL+ +PD +TF + K+C +G +G
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLG 128
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VHG + + G ++++Y + D KVFDEMS RDVI N ++ G+ +
Sbjct: 129 KQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARL 188
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G + K LF M ++++VSW MIS G EA+ F EM+ E DE ++++VL
Sbjct: 189 GQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P CA LG++++G+WIH YAE GL ++ V NAL++ Y KCG+L A +F++ K+V
Sbjct: 249 PSCAHLGSLELGKWIHMYAERRGLLKQT-GVCNALIEMYSKCGMLSQAIQLFEQTKGKDV 307
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW+ MISG A++G E + +M V PN TF+G+L+ C+H GL ++ + F
Sbjct: 308 ISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDM 367
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P +EHYGC++DVL R+G + A ++ ++M ++P++ IWGSLLSSCRT G+++
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLD 427
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A A+ L+ +EP + GNYVLL+NIYA+ G+W+D LR +R+ N+KK+PG SLIE
Sbjct: 428 VALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIE 485
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/462 (42%), Positives = 277/462 (59%), Gaps = 1/462 (0%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R LLH + L Q+HAH L+ S+L L+ SVC + YA IF +
Sbjct: 16 RPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDA 75
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
V +N+ +++++ + + LF L+ I PD YT + +LKAC + D+R G+ V
Sbjct: 76 SEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIV 135
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG + + G + ++ +V LY CG++ KVFD+M RDVI N+MI K GD
Sbjct: 136 HGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDA 195
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ LF EM ER+V SW MI + G+ EA+ LF EM D +E TVVAVL C
Sbjct: 196 EGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVAC 255
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A +G + +G+ IH ++ SG Y K + V N L+D Y KCG L+ A +F + + VVSW
Sbjct: 256 ADMGNLVLGRRIHDFSNRSG-YEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSW 314
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI+GLA +GR E + L+ +MI GV PN TF+G+L C+H G+VEK R+ FASMT
Sbjct: 315 SAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTR 374
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ IVP +EHYGCMVD+ R+G ++EA++ I +M I PN +WG+LL C+ H +V+LAE
Sbjct: 375 DYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAE 434
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
A + L L+P N G YV+LSNIYAE GRW+D +R MR+
Sbjct: 435 EATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRD 476
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 298/467 (63%), Gaps = 6/467 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L +IHAH ++ L QS+ ++ V VC E +YA +F + +P+ L+N+MI+AY
Sbjct: 28 VELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAY 87
Query: 76 SLNGPSEEPVKLF-ALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
N + ++ +L N I+PD++TF ++K+C G+ +G+ VHG + + G
Sbjct: 88 KHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFG 147
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ + +VE+Y C +DD +VF+EM+ RD + N +I G + G + + +F
Sbjct: 148 QKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFE 207
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
EM+++++ SW ++S + G ++AL F M+ E DE ++V+VLP CA+LGA+++
Sbjct: 208 EMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALEL 267
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIH YA+ +G R + V NAL++ Y KCG +D R +F ++ ++V+SW+ MI GLA
Sbjct: 268 GKWIHIYADKAGFLRNIC-VCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLA 326
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+GR +EL+++M + P+ TFVG+LT CAHAGL+ + F SM ++I P +
Sbjct: 327 NHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGV 386
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGC+V++LG SG + +A +L++ M +P++ IWGSLLSSCR+HG++++A A++ L+
Sbjct: 387 EHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLE 446
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP ++GNYVLLSN+YA+ G+WD +R MR ++KK+PG S IE
Sbjct: 447 LEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIE 493
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/481 (38%), Positives = 286/481 (59%), Gaps = 4/481 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN 58
+E +++ +LH + + Q+HAH +R+ L Q + +L + + ++ Y +F
Sbjct: 41 LEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFG 100
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ L+ +MI+ Y+L G E + ++ G+ P +TF+ L KAC ++ +
Sbjct: 101 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 160
Query: 119 GQCVHGE-IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH + I+ GF + +++LY CG + KVFDEMS RDV+ +I +
Sbjct: 161 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 220
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K GD++ LF ++ + +V+W M++ ++GR EAL F +M+D E DE T+
Sbjct: 221 KYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280
Query: 238 VLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
V+ CA+LGAV WI AE SG V VG+AL+D Y KCG D A VF+ +
Sbjct: 281 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 340
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+NV S+++MI G A +GR ++L+ M+ + PNK TF+G+L+ C+HAGLVE+ R+L
Sbjct: 341 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
FA M + P+ +HY CMVD+LGR+GC+ EA DL+++M + PN +WG+LL +CR HG
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ ++A+ A EL LEP GNY+LLSNIYA GRW++ LR +RE KK+PG S
Sbjct: 461 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
Query: 477 E 477
E
Sbjct: 521 E 521
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/481 (38%), Positives = 286/481 (59%), Gaps = 4/481 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN 58
+E +++ +LH + + Q+HAH +R+ L Q + +L + + ++ Y +F
Sbjct: 41 LEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFG 100
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ L+ +MI+ Y+L G E + ++ G+ P +TF+ L KAC ++ +
Sbjct: 101 QVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDL 160
Query: 119 GQCVHGE-IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH + I+ GF + +++LY CG + KVFDEMS RDV+ +I +
Sbjct: 161 GKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYA 220
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K GD++ LF ++ + +V+W M++ ++GR EAL F +M+D E DE T+
Sbjct: 221 KYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280
Query: 238 VLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
V+ CA+LGAV WI AE SG V VG+AL+D Y KCG D A VF+ +
Sbjct: 281 VISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKE 340
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+NV S+++MI G A +GR ++L+ M+ + PNK TF+G+L+ C+HAGLVE+ R+L
Sbjct: 341 RNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
FA M + P+ +HY CMVD+LGR+GC+ EA DL+++M + PN +WG+LL +CR HG
Sbjct: 401 FAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ ++A+ A EL LEP GNY+LLSNIYA GRW++ LR +RE KK+PG S
Sbjct: 461 NPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWF 520
Query: 477 E 477
E
Sbjct: 521 E 521
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/461 (39%), Positives = 285/461 (61%), Gaps = 1/461 (0%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
HL QIH L L Q NL L+ F+ C +L YA IF+ +P + L+N+ IKA S
Sbjct: 39 HLYQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALS 98
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ L+ ++ G+ PD Y+ +LKA + + + VG+ +H + + S + +
Sbjct: 99 KTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVN 158
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y+SCG + D K+FD + +DV + N M+ G+ K G++ +F EM +R+
Sbjct: 159 VATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRN 218
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
V+SW +I+ ++ R EA+ LF +M+ + E DE ++AVL CA LGA+++G+WIH+
Sbjct: 219 VISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHN 278
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y E GL R +VS+ NAL+D Y K G + A VF+ + +K+V++W+ +I+ LA +G G
Sbjct: 279 YIEKHGLCR-IVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGG 337
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++++ +M V PN+ TFV +L+ C+H G+V+ R F M ++ I P +EHYGCM
Sbjct: 338 EAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCM 397
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
+D+L R+G ++EA L+ M NA IWGSLL++ TH ELA+ A+K L LEP NS
Sbjct: 398 IDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNS 457
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYVLLSN YA G+W+++ T+R MR VKK+PG S+IE
Sbjct: 458 GNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIE 498
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 294/478 (61%), Gaps = 2/478 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L +R +I+A + H L QS+ ++ V C + ++ YAT++FNQ+
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV 68
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V L+NS+I+AY+ N + ++++ LL+ PD +TF + K+C +G +G
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VHG + + G ++++Y + D KVFDEM RDVI N ++ G+ +
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G + K LF M ++++VSW MIS G EA+ F EM+ E DE ++++VL
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P CA+LG++++G+WIH YAE G + K V NAL++ Y KCG++ A +F ++ K+V
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRG-FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW+ MISG A++G +E + +M V PN TF+G+L+ C+H G+ ++ F
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P +EHYGC++DVL R+G + A ++ ++M ++P++ IWGSLLSSCRT G+++
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLD 427
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A A+ L+ LEP + GNYVLL+NIYA+ G+W+D LR +R N+KK+PG SLIE
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/479 (39%), Positives = 285/479 (59%), Gaps = 8/479 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
+RL G N+ HL +HA LR L + + +L + Y+ +IF+Q + P++
Sbjct: 14 IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNI 73
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
LFN+MI LN +E ++++ ++ G+ PD +TF LLKAC + D ++G +HG
Sbjct: 74 FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGL 133
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++++G E + +V LY CG +D+ KVFD++ ++V +I G+ G +
Sbjct: 134 VVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREA 193
Query: 186 LYLFRE-------MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+ +FR M E+ +VSW+ MI +G EAL LF +M ++ F D +V V
Sbjct: 194 IDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGV 253
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CARLGA+++G W + + + V +G AL+D Y KCG +D+A VF+ + +K+
Sbjct: 254 LCACARLGALELGNWASNLMDRNEFLGNPV-LGTALIDMYAKCGRMDSAWEVFRGMRKKD 312
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+V WNA ISGLA +G + L+ QM G+ P+ TFVG+L C HAGLV++ R+ F
Sbjct: 313 IVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFN 372
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + ++ P +EHYGCMVD+LGR+G + EA+ L++SM + NA +WG+LL CR H
Sbjct: 373 SMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDT 432
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L E +K+LI LEP NSGNYVLLSNIY+ +W+DA +R M E +KK PG S IE
Sbjct: 433 QLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIE 491
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 283/473 (59%), Gaps = 1/473 (0%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+L LL + HL Q H L L Q N++L+ F+ C +L Y+ IF P
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPD 103
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ L+N++IKA S + E + L+ + + D Y+ +LKA + + + VG+ +H
Sbjct: 104 IYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHC 163
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ I +G + ++++Y+SCG + + ++FD + RDV N M+ G+ K GDVD
Sbjct: 164 QAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDN 223
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+LF M ER+V+SW +I+ + R +EA+ +F M+ + E DE ++A L CA
Sbjct: 224 ARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAH 283
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
LGA+++G+WIH+Y + GL K+V + NAL+D Y KCG ++ A VFK + K+V++W +
Sbjct: 284 LGALELGEWIHNYIDKHGL-SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTS 342
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA +G G +E++ M + PN+ TFV +L+ C H GLVE R F M +
Sbjct: 343 MIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKY 402
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P ++HYGCM+D+LGR+G ++EA +L+R M NA IWGSLL++ R HG EL + A
Sbjct: 403 GIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQA 462
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++ LI +EP NSGNY LLSNIYA +W++A +R MR+ VKK PG S IE
Sbjct: 463 LQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIE 515
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/473 (39%), Positives = 283/473 (59%), Gaps = 1/473 (0%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+L LL + HL Q H L L Q N++L+ F+ C +L Y+ IF P
Sbjct: 44 LLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPD 103
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ L+N++IKA S + E + L+ + + D Y+ +LKA + + + VG+ +H
Sbjct: 104 IYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHC 163
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ I +G + ++++Y+SCG + + ++FD + RDV N M+ G+ K GDVD
Sbjct: 164 QAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDN 223
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+LF M ER+V+SW +I+ + R +EA+ +F M+ + E DE ++A L CA
Sbjct: 224 ARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAH 283
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
LGA+++G+WIH+Y + GL K+V + NAL+D Y KCG ++ A VFK + K+V++W +
Sbjct: 284 LGALELGEWIHNYIDKHGL-SKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTS 342
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA +G G +E++ M + PN+ TFV +L+ C H GLVE R F M +
Sbjct: 343 MIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKY 402
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P ++HYGCM+D+LGR+G ++EA +L+R M NA IWGSLL++ R HG EL + A
Sbjct: 403 GIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQA 462
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++ LI +EP NSGNY LLSNIYA +W++A +R MR+ VKK PG S IE
Sbjct: 463 LQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIE 515
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/462 (41%), Positives = 282/462 (61%), Gaps = 7/462 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L QI A+ LR+ + + ++ + + I YA K+F+ + P+V L+N +I+AYS
Sbjct: 4 LKQIQAYTLRNGIEHTKQLIVSLLQI----PSIPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+GP + L+ + G P+E++F L AC + + G+ +H ++SGF
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y G + K FDEM+ RDV N MI G+ + GD++ L LFR M R+V
Sbjct: 120 LTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNV 179
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHS 256
SW MIS ++G+ ++AL +F M ++ +E T+ +VLP CA LGA+++G+ I
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRG 315
YA +G Y K + V NAL++ Y +CG +D A VF+EI R+N+ SWN+MI GLA +GR
Sbjct: 240 YARGNG-YFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRC 298
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ +EL+ +M+ +G +P+ TFVGVL C H G+V + + F SM SI P LEHYGC
Sbjct: 299 DEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGC 358
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G +REA+DLI M + P++ +WG+LL +C HGHVELAE A L LEP N
Sbjct: 359 MVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSN 418
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYV+LSNIYA GRWD LR M+ + K+ G S IE
Sbjct: 419 PGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIE 460
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/483 (38%), Positives = 287/483 (59%), Gaps = 8/483 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN 58
+E +++ +LHG + Q+HAH R L Q +LA + L+ Y +F
Sbjct: 38 LESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQ 97
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ L+ ++I+ Y+L GP E V L+ ++ GI P +TF LLKAC D+ +
Sbjct: 98 QVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNL 157
Query: 119 GQCVHGEIIRSGFERFGS-IRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
G+ VH + I G FGS + +G ++++Y CG + G +VFDEM RDVI +I
Sbjct: 158 GRQVHTQTILIG--GFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G+++ LF + + +V+W M++ ++ R EAL +F M+ + DE T+
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTL 275
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
V V+ CA+LGA W+ AE SG V VG+AL+D Y KCG ++ A VF+ +
Sbjct: 276 VGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+NV S+++MI G A +G +EL+++M+ + PN+ TF+GVLT C+HAG+VE+ +
Sbjct: 336 EERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQ 395
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+LFA M H + P+ +HY CMVD+LGR+G + EA +L++ M + P+ +WG+LL +CR
Sbjct: 396 QLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRI 455
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG+ ++A+ A L LEP GNY+LLSNIYA GRWDD +R MR +KK+PG S
Sbjct: 456 HGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515
Query: 475 LIE 477
+E
Sbjct: 516 WVE 518
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/484 (37%), Positives = 297/484 (61%), Gaps = 8/484 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + +L L IHAH +++ L QS+ ++ V VC ++ YA+ +F Q+
Sbjct: 13 LENFFVPILQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQV 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-------IWPDEYTFAPLLKACLGV 113
+ P+ L+N+MI+A++ N + + + L I+PD +TF ++K+C G+
Sbjct: 73 KEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGL 132
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G+ VH + + G + ++ ++++YT C + D KVFD M RD I N +I
Sbjct: 133 VCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSII 192
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G G + K LF M R++VSW MIS + G ++AL +F +M+ E DE
Sbjct: 193 SGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEI 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++++VLP CA+LGA+++G+WIH Y + +GL RK S+ NAL++ Y KCG + A +F +
Sbjct: 253 SIISVLPACAQLGALEVGKWIHMYCDRNGLLRKT-SICNALMEMYSKCGCIGQAYQLFDQ 311
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ + +V+SW+ MI GLA +G+ +EL+++M + PN TF+G+L+ CAHAG +
Sbjct: 312 MSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEG 371
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F SM+ + I P +EHYGC+VD+LGR+G + +A D+I M ++P++ IWGSLLSSCR
Sbjct: 372 LAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCR 431
Query: 414 THGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
TH ++++A A++ L LEP ++GNYVLLSNIYA+ +WD +R ++ ++KK+PG
Sbjct: 432 THSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGS 491
Query: 474 SLIE 477
SLI+
Sbjct: 492 SLID 495
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 284/466 (60%), Gaps = 12/466 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+ QIH + LR+ + Q+ +++ + + + YA K+ + P++ L+N +I+AYS
Sbjct: 3 QVKQIHGYTLRNGIDQTKILIEKLLEI----PNLHYAHKVLHHSPKPTLFLYNKLIQAYS 58
Query: 77 LNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
+ + + F+L + P+++TF L AC + +GQ +H I+SGFE
Sbjct: 59 SHPQHQH--QCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEP 116
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
++++YT G ++ K+FD+M R V N M+ G + GD+D L LFR M
Sbjct: 117 DLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMP 176
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA-TVVAVLPICARLGAVDIGQ 252
R+VVSW MIS +S + EAL LF M + + A T+ ++ P A LGA++IGQ
Sbjct: 177 SRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQ 236
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAF 311
+ +YA +G ++ + V NA+++ Y KCG +D A VF EI +N+ SWN+MI GLA
Sbjct: 237 RVEAYARKNGFFKNLY-VSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAV 295
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G ++LY+QM+ +G SP+ TFVG+L C H G+VEK R +F SMT +I+P LE
Sbjct: 296 HGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLE 355
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYGCMVD+LGR+G +REAY++I+ M ++P++ IWG+LL +C H +VELAE A + L L
Sbjct: 356 HYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFAL 415
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EPWN GNYV+LSNIYA G+WD LR M+ + + KS G S IE
Sbjct: 416 EPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIE 461
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 292/485 (60%), Gaps = 9/485 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E ++ L T L ++H H +R ++ QS+ + V +C + +A ++F Q+
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-------DEYTFAPLLKACLGV 113
R+P++ L N+MIKAY+ N + V ++ + P D +T+ LLKAC G
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
L +G+ VH ++RSG + ++ ++E+YT G + KVFDEM RDV+ N++I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+ G + K LF M ++++V+W M+S G A+ F M+ + FE D+
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDV 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++VAVLP CA+LGA+++G+WI++Y + G+ + NAL++ Y KCG +D A +F
Sbjct: 253 SIVAVLPACAQLGALELGRWIYAYCKRHGMLTST-HICNALMEMYAKCGCIDQALQLFDG 311
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEK 352
+ K+V+SW+ +I GLA +GR V L+ +M +G V PN TFVG+L+ C++AGLV++
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDE 371
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F M ++ + P +EHYGC+VD+LGRSG +R A DL+R M + +A +WGSLLS+C
Sbjct: 372 GLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSAC 431
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R+HG V+ A A + L+ LEP + GN V+L+N+YA RW D + R +R +++K+PG
Sbjct: 432 RSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 QSLIE 477
SLIE
Sbjct: 492 CSLIE 496
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 292/485 (60%), Gaps = 9/485 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E ++ L T L ++H H +R ++ QS+ + V +C + +A ++F Q+
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-------DEYTFAPLLKACLGV 113
R+P++ L N+MIKAY+ N + V ++ + P D +T+ LLKAC G
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
L +G+ VH ++RSG + ++ ++E+YT G + KVFDEM RDV+ N++I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+ G + K LF M ++++V+W M+S G A+ F M+ + FE D+
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDV 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++VAVLP CA+LGA+++G+WI++Y + G+ + NAL++ Y KCG +D A +F
Sbjct: 253 SIVAVLPACAQLGALELGRWIYAYCKRHGMLTST-HICNALMEMYAKCGCIDQALQLFDG 311
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEK 352
+ K+V+SW+ +I GLA +GR V L+ +M +G V PN TFVG+L+ C++AGLV++
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDE 371
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F M ++ + P +EHYGC+VD+LGRSG +R A DL+R M + +A +WGSLLS+C
Sbjct: 372 GLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSAC 431
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R+HG V+ A A + L+ LEP + GN V+L+N+YA RW D + R +R +++K+PG
Sbjct: 432 RSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 QSLIE 477
SLIE
Sbjct: 492 CSLIE 496
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 296/478 (61%), Gaps = 15/478 (3%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
+HG N +T L Q H + + L++ NL +A F+ C ++YA +F P+ L
Sbjct: 23 IHGNNLKT-LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 69 NSMIKAYSL-NGPSEEPV------KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
N+MI+A SL + P+ + KL+AL PD +TF +LK + V D+ G+
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAK----PDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG+++ GF+ + G++++Y SCG + D K+FDEM +DV V N ++ G+ K G+
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 182 VDKGLYLFREMR--ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+D+ L M R+ VSW +IS KSGR SEA+ +F M + E DE T++AVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LG++++G+ I SY + G+ R VS+ NA++D Y K G + A +VF+ + +NV
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V+W +I+GLA +G G + ++ +M+ GV PN TF+ +L+ C+H G V+ + LF S
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I PN+EHYGCM+D+LGR+G +REA ++I+SM + NAAIWGSLL++ H +E
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E A+ ELI LEP NSGNY+LL+N+Y+ GRWD++ +R M+ VKK G+S IE
Sbjct: 437 LGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 181/485 (37%), Positives = 291/485 (60%), Gaps = 9/485 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E ++ L T L ++H H +R ++ QS+ + V +C + +A ++F Q+
Sbjct: 13 LEDAVMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQV 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-------DEYTFAPLLKACLGV 113
R+P++ L N+MIKAY+ N + V ++ + P D +T+ LLKAC G
Sbjct: 73 RDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGT 132
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
L +G+ VH ++RSG + ++ ++E+YT G + KVFDEM RDV+ N++I
Sbjct: 133 AALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLI 192
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+ G + K LF M ++++V+W M+S G A+ F M+ + FE D+
Sbjct: 193 SAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDV 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++VAVLP CA+LG +++G+WI++Y + G+ + NAL++ Y KCG +D A +F
Sbjct: 253 SIVAVLPACAQLGTLELGRWIYAYCKRHGMLTST-HICNALMEMYAKCGCIDQALQLFDG 311
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEK 352
+ K+V+SW+ +I GLA +GR V L+ +M +G V PN TFVG+L+ C++AGLV++
Sbjct: 312 MADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDE 371
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F M ++ + P +EHYGC+VD+LGRSG +R A DL+R M + +A +WGSLLS+C
Sbjct: 372 GLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSAC 431
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R+HG V+ A A + L+ LEP + GN V+L+N+YA RW D + R +R +++K+PG
Sbjct: 432 RSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPG 491
Query: 473 QSLIE 477
SLIE
Sbjct: 492 CSLIE 496
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/476 (39%), Positives = 282/476 (59%), Gaps = 4/476 (0%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRN 62
ILR L T LTQIHA + + N + + +S I YA +F ++R
Sbjct: 38 ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P + + N++I+AY+ + + V ++ + ++ ++PD +TF LLKAC + LR+G+
Sbjct: 98 PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H + + G+ S+ +V++Y SCG ++ VFD D N+MI G+ K G
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+F M +R VVSW++MI+ + R E L LF +M + E +E+ +V L
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA++ GQWI Y E + R V +G AL+D Y KCG ++ A VF ++ KNV++
Sbjct: 278 CAHLGAMEQGQWIERYMERKNV-RLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLA 336
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W+AMI+GLA NG+G+ + L+ QM +GV PN+ TF+G+L C+H+ LV++ F SMT
Sbjct: 337 WSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMT 396
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ + PN H+ CMVD+ GR+G + +A +I+SM +PN+AIWG+LL++CR HG EL
Sbjct: 397 SIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELG 456
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E K L+ L+P + G YVLLSNIYA GRWD LR MRE V K+PG S I+
Sbjct: 457 EQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFID 512
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/485 (37%), Positives = 295/485 (60%), Gaps = 9/485 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E ++ L + L ++HAH +R L QS+ + V +C + +AT++F+Q+
Sbjct: 12 VEDAVMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQV 71
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-------DEYTFAPLLKACLGV 113
R P++ L N+MIKAY+ N + + ++ + +P D +T+ LLKAC G+
Sbjct: 72 REPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGL 131
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
L +G+ VHG ++RSG E ++ ++E+YT G + KVFD M RDV+ N +I
Sbjct: 132 MALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVI 191
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+ G + K +F M +++VVSW ++S +G S A+ F M+ + FE D+
Sbjct: 192 SAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDV 251
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++VAVLP CA+LGA+++G+WI++Y + R+ V NALV+ Y KCG +D A +F
Sbjct: 252 SIVAVLPACAQLGALELGRWIYAYCNRHQMLRETY-VCNALVEMYAKCGCIDQALQLFNG 310
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEK 352
+ K+V+SW+ M+ GLA +GR + V+L+ +M +G V PN TFVG+L+ C+HAGL+++
Sbjct: 311 MAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDE 370
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ F M ++ I P +EHYGC+VD+L RSG ++ DLI M + +A IWGS+L++C
Sbjct: 371 GLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNAC 430
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R+HG V+ A A + L+ LEP + GN V+L+N+YA RW + R +R +++K+PG
Sbjct: 431 RSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPG 490
Query: 473 QSLIE 477
SLIE
Sbjct: 491 CSLIE 495
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/476 (39%), Positives = 287/476 (60%), Gaps = 11/476 (2%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
+HG N +T L Q H + L++ NL +A F+ C ++YA +F P+ L
Sbjct: 23 IHGTNLKT-LKQSHCFMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLH 81
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIW-----PDEYTFAPLLKACLGVGDLRVGQCVH 123
N+MI+A SL E A+ W PD +TF +LK + V D+ G+ VH
Sbjct: 82 NTMIRALSL--VDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVH 139
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G+ + GF+ + G++++Y+SCG + D KVFDEM RDV V N ++ G+ K G++D
Sbjct: 140 GQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMD 199
Query: 184 KGLYLFREMR--ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ L M R+ VSW +IS +SGR SEA+ +F M + + DE T++AVL
Sbjct: 200 EARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSA 259
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LG++++G+ I SY + G+ R VS+ NA++D Y K G + A VF+ + +NVV+
Sbjct: 260 CADLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALEVFESVNERNVVT 318
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W +I+GLA +G G + ++++M+ GV PN TF+ +L+ C+H G V+ F SM
Sbjct: 319 WTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMR 378
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I PN+EHYGCM+D+LGR+G +REA ++I+SM NAAIWGSLL++ H +++
Sbjct: 379 SKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVG 438
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A+ +LI LEP NSGNY+LL+N+Y+ GRWD++ +R M+ VKK G+S IE
Sbjct: 439 ERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIE 494
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/485 (37%), Positives = 285/485 (58%), Gaps = 13/485 (2%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I LL T + L Q+HA +R LHQ + I++ F+++C +L+ Y T +FN + +PS
Sbjct: 76 ISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPS 135
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+L+N+ IK YS N V LF +K PD++T+ L+KAC V ++ G HG
Sbjct: 136 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 195
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+R G + +++LY CG++ KVFDEM R+V+ MI G+ D+ +
Sbjct: 196 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE 255
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM----RDQA---------FELD 231
LF EM E++ VSWN +IS K G A ++F EM RD + D
Sbjct: 256 ARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPD 315
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E +V+++ C+++G++++ +W+ Y S + V AL+D KCG +D A +F
Sbjct: 316 EFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLF 375
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+E+P+++++S+ +M+ GL+ +G G V L+ +M+ +G++P+ F +LT C+ AGLV+
Sbjct: 376 EEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVD 435
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SM +SIVP+ +HY CMVD+LGR+G ++EAY+L++SM + P+A WG+LL +
Sbjct: 436 EGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGA 495
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
C+ H +EL E +L LEP N+GNYVLLSNIYA +W D LR MRE ++K P
Sbjct: 496 CKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIP 555
Query: 472 GQSLI 476
G S I
Sbjct: 556 GCSWI 560
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/481 (37%), Positives = 288/481 (59%), Gaps = 4/481 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN 58
+E +I+ L G T + Q+HA L + L QS +LA + LN Y IFN
Sbjct: 45 LESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFN 104
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ L+N++I+ Y + +E + ++L++ G+ P +TF L KAC D+ +
Sbjct: 105 QVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGL 164
Query: 119 GQCVHGE-IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ +HG+ I+ GF + ++++Y CG ++ G KVFDEM +RDVI +I +
Sbjct: 165 GRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYV 224
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K G+++ LF + + +V+W +M+S ++ + EA+ F +M++ E DE T++
Sbjct: 225 KSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIG 284
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRK-VVSVGNALVDFYCKCGILDTARNVFKEIPR 296
V+ CA+LGA WI AE S K V VG+AL+D Y KCG + A VF+ +
Sbjct: 285 VISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKE 344
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+NV S+++MI G A +GR ++L+++M+ + PN+ TF+GVLT C+HAG+VE+ ++
Sbjct: 345 RNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQI 404
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + I P+ +HY CMVD+LGR+G ++EA++L+++M I P+ +WG+LL +CR H
Sbjct: 405 FELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHK 464
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++A A L LEP+ GNY+LL+NIYA GRW+D T+R MR ++K+P S I
Sbjct: 465 SPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWI 524
Query: 477 E 477
E
Sbjct: 525 E 525
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 281/489 (57%), Gaps = 33/489 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
++A ++ +Q ++ F+S T N + YA + QM P+V ++N+MIK + +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ ++L+ + + P YTF L+KAC V LR + VHG + R+GF+ ++
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTS 120
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD------------------- 181
+V+ Y+S G++++ ++VFDEM RDV M+ G + GD
Sbjct: 121 LVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATW 180
Query: 182 ------------VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
VD LF +M R ++SW MI+ ++ R EAL +F+EM
Sbjct: 181 NTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGIS 240
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
DE T+ V+ CA LGA+D+G+ IH Y G + V +G+AL+D Y KCG LD +
Sbjct: 241 PDEVTMATVISACAHLGALDLGKEIHYYIMQHG-FNLDVYIGSALIDMYAKCGSLDRSLL 299
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F ++ KN+ WN++I GLA +G E + ++++M + + PN TFV VL+ C HAGL
Sbjct: 300 MFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGL 359
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+E+ R+ FASMT HSI P +EHYGCMVD+L ++G + EA LIR+M + PNA IWG+LL
Sbjct: 360 IEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALL 419
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-K 468
S C+ H ++E+A+ A +L+ LEP NSG Y LL N+ AE RW +A +R+ M+E V K
Sbjct: 420 SGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEK 479
Query: 469 KSPGQSLIE 477
+ PG S IE
Sbjct: 480 RCPGSSWIE 488
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 39/232 (16%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IH + ++H + I L + CG+L+ + +F ++R ++ +NS+I+ +
Sbjct: 264 EIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDR---SLLMFFKLREKNLFCWNSVIEGLA 320
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-----GF 131
++G +EE + +F ++ I P+ TF +L AC G + G+ + R G
Sbjct: 321 VHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGV 380
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
E +G + V+L + G +++ +++ M + ++ ++ G CK L R
Sbjct: 381 EHYGCM----VDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG-CK---------LHR 426
Query: 191 EMRERSVVSWNLMISSLGKSG-------------RDSEALRLFHEMRDQAFE 229
+ V + LM+ G SG R EA ++ M++Q E
Sbjct: 427 NLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVE 478
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 179/469 (38%), Positives = 286/469 (60%), Gaps = 10/469 (2%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L + HA +++ L QSN ++ + VC ++ YA+ +F ++ +P+ L+N+MI+A +
Sbjct: 4 LKKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEVIDPNAYLYNAMIRACTH 63
Query: 78 NGPSEEPVKLF-ALLKNLG--------IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N + + +L+ I PDE+TF ++KAC +G +G+ VH + +
Sbjct: 64 NSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFK 123
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
G + ++++YT C + D +FDEM R I N +I G + G + + L
Sbjct: 124 FGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARAL 183
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F EM R++VSW +IS + G +AL +F EM+ E DEA++++VLP CA+LGA+
Sbjct: 184 FDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGAL 243
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+ G+WIH + +GL R+ + NAL++ Y KCG +D A +F ++ ++V+SW+ MI G
Sbjct: 244 ETGKWIHMFCARNGLLRRTC-ICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGG 302
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
LA +G+ + ++E+M + PN TFVG+L+ CAHAG E+ F +M I P
Sbjct: 303 LANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEP 362
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+EHYG +VD+LGR+G + +A D++ M ++P++ IWGSLLSSCRTH ++E+A A++ L
Sbjct: 363 EIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHL 422
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP ++GNYVLLSNIYA+ G+WDD +R +R +KK+PG SLIE
Sbjct: 423 EELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIE 471
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 176/470 (37%), Positives = 280/470 (59%), Gaps = 5/470 (1%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ T +HL QIHA RH L ++ +L + Y+ +F + +NPSV
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFF 95
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+ ++I ++L G E+ + +A + G+ P+ +TF+ +LK C + G+ +H + +
Sbjct: 96 WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAV 151
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ GF+ +R G++++Y G + ++FD M + ++ M+ + K G++D
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARV 211
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF M ER V WN+MI ++G +EAL LF M + +E TV++VL C +LGA
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
++ G+W+HSY E++G+ V VG ALVD Y KCG L+ AR VF +I K+VV+WN+MI
Sbjct: 272 LESGRWVHSYIENNGIQFNV-HVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 330
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G + ++L++ M G+ P TF+G+L+ C H+G V + ++F M + I
Sbjct: 331 GYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE 390
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMV++LGR+G V +AY+L+++M+I P+ +WG+LL +CR HG + L E V+
Sbjct: 391 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVEL 450
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L++ NSG Y+LLSNIYA G WD LR M+++ VKK PG S IE
Sbjct: 451 LVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIE 500
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 276/461 (59%), Gaps = 7/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H L+H L + + L +CG L+ A +F+ V+ +N +I AY+
Sbjct: 139 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT---ARGVFDVCPKADVITWNMIISAYN 195
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G EE +LF ++++ + P T +L AC + DLR G+ VH + E
Sbjct: 196 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 255
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG+MD + +F M++RD+I ++ GF G++D F +M E+
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 315
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSW MI +S R EAL LF M+ + DE T+V+VL CA LGA+++G+WI +
Sbjct: 316 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 375
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + + + V NAL+D Y KCG +D A ++F+E+ +++ +W AMI GLA NG GE
Sbjct: 376 YIDRNKI-KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++++ M+ + P++ T++GVL+ C H GLV+K R+ F MT H I PN+ HYGC+
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L R+G ++EAY++I +M I+ N+ +WG+LL+ CR + ++AE VK+++ LEP N
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 554
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL NIYA RW+D LR M + +KK+PG SLIE
Sbjct: 555 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIE 595
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 67/450 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRN 62
++ LL + L Q+H ++ L+ + ++ ++ C T + +YA ++F+++
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 80
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ ++N+MI+ YS + V L+ + G+ PD YTF L K L G+ +
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 140
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G + + +V++Y CGQ+D VFD DVI N++I +
Sbjct: 141 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY------ 194
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
K G+ E+ RLF M D+ T+V VL C
Sbjct: 195 -------------------------NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 229
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT---------------- 286
++L + G+ +HSY ++ + +V + NA++D Y CG +D+
Sbjct: 230 SKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGEMDSALGIFRSMNNRDIISW 288
Query: 287 ---------------ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
ARN F ++P K+ VSW AMI G + R + +EL+ M A V
Sbjct: 289 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 348
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ T V VLT CAH G +E E + + I +L ++D+ + G V +A
Sbjct: 349 PDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 407
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ R MS R + W +++ +GH E A
Sbjct: 408 IFREMSQR-DKFTWTAMIVGLAVNGHGEKA 436
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 357 bits (916), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/463 (40%), Positives = 283/463 (61%), Gaps = 42/463 (9%)
Query: 20 QIHAHFLR-----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
QIHA ++ H ++ LI H + CG E++ A ++F++M +V +NSM
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLI--HMYANCG---EVEVARRVFDEMSERNVRTWNSMFAG 199
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
Y+ +G EE VKLF + L I DE T +L AC + DL +G+ ++ + G +
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
++ +V++Y CGQ+D + LF +M
Sbjct: 260 PTLITSLVDMYAKCGQVDTARR-------------------------------LFDQMDR 288
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
R VV+W+ MIS ++ R EAL LFHEM+ + +E T+V++L CA LGA++ G+W+
Sbjct: 289 RDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWV 348
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H + + + + V++G AL+DFY KCG ++++ VF ++P KNV+SW +I GLA NG+
Sbjct: 349 HFFIKKKRM-KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQ 407
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G+ +E + M+ K V PN TF+GVL+ C+HAGLV++ R+LF SM+ I P +EHYG
Sbjct: 408 GKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYG 467
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGR+G + EA+ I++M I+PNA IW +LL+SC+ H +VE+ E ++K+LI LEP
Sbjct: 468 CMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPT 527
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+SG+Y+LLSNIYA GRW+DA +R M+E +KK+PG SLIE
Sbjct: 528 HSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIE 570
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 283/463 (61%), Gaps = 7/463 (1%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L QIHA+ LR+ L + ++ + L ++ YA +F+Q+ PSV L+N I+ +S
Sbjct: 3 QLKQIHAYSLRNGLDHTKFLIEKLLQ----LPDLPYACTLFDQIPKPSVYLYNKFIQTFS 58
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G L+ + + G P++Y+F L AC + ++ GQ +H +SGF
Sbjct: 59 SIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMF 118
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++++Y G + ++FDEM RD+ N +I G+ + G ++ L LF +M R+
Sbjct: 119 AMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRN 178
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWIH 255
V+SW +IS ++G+ ++AL +F + ++ + +E ++ +VLP C++LGA+DIG+ I
Sbjct: 179 VISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIE 238
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGR 314
+YA ++G ++ V NA+++ + +CG ++ A+ VF EI ++N+ SWN MI GLA +GR
Sbjct: 239 AYARNNGFFKNAY-VSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGR 297
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
++LY+QM+ + + P+ TFVG+L C H G+V + R+LF SM + P LEHYG
Sbjct: 298 CIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYG 357
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
C+VD+LGR+G ++EAY+LI++M + P++ IWG+LL +C HG+VEL E A + L LEPW
Sbjct: 358 CLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPW 417
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
N GNYV+LSNIYA G W LR M+ ++ K G S IE
Sbjct: 418 NPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIE 460
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 275/461 (59%), Gaps = 7/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H L+H L + + L +CG L+ A +F+ V+ +N +I AY+
Sbjct: 160 QLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT---ARGVFDVCPKADVITWNMIISAYN 216
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G EE +LF ++++ + P T +L AC + DLR G+ VH + E
Sbjct: 217 KVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 276
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG+MD + +F M++RD+I ++ GF G++D F +M E+
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD 336
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSW MI +S R EAL LF M+ + DE T+V+VL CA LGA+++G+WI +
Sbjct: 337 YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRT 396
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + + + V NAL+D Y KCG +D A ++F+E+ +++ +W AMI GLA NG GE
Sbjct: 397 YIDRNKI-KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++++ M+ + P++ T++GVL+ C H GLV+K R+ F MT H I PN+ HYGC+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L R+G ++EAY++I +M I+ N+ +WG+LL+ CR + ++AE VK+++ LEP N
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 575
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL NIYA RW+D LR M + +KK PG SLIE
Sbjct: 576 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIE 616
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 203/450 (45%), Gaps = 67/450 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRN 62
++ LL + L Q+H ++ L+ + ++ ++ C T + +YA ++F+++
Sbjct: 42 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPE 101
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ ++N+MI+ YS + V L+ + G+ PD YTF L K L G+ +
Sbjct: 102 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQL 161
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G + + +V++Y CGQ+D VFD DVI N++I +
Sbjct: 162 HGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY------ 215
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
K G+ E+ RLF M D+ T+V VL C
Sbjct: 216 -------------------------NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 250
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT---------------- 286
++L + G+ +HSY ++ + +V + NA++D Y CG +D+
Sbjct: 251 SKLKDLRTGKKVHSYVKNCKVESNLV-LENAMIDMYADCGEMDSALGIFRSMNNRDIISW 309
Query: 287 ---------------ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
ARN F ++P K+ VSW AMI G + R + +EL+ M A V
Sbjct: 310 TTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVK 369
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ T V VLT CAH G +E E + + I +L ++D+ + G V +A
Sbjct: 370 PDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 428
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ R MS R + W +++ +GH E A
Sbjct: 429 IFREMSQR-DKFTWTAMIVGLAVNGHGEKA 457
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 278/467 (59%), Gaps = 3/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNS 70
+T L Q H+ +R L N + + C ++ YA ++F+++ +P ++N+
Sbjct: 31 STMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNT 90
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+ + Y + + +++ + + + P+++T+ PL++AC + G+ +H +++ G
Sbjct: 91 IFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFG 150
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F G ++ +Y + ++ +VFD M RDV+ +I G+ + G VDK +F
Sbjct: 151 FGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFE 210
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
M ER+ VSWN MI++ +S R EA LF MR + LD+ ++L C LGA++
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIH Y E SG+ + ++D YCKCG L+ A VF E+P+K + SWN MI GLA
Sbjct: 271 GKWIHGYIEKSGIELDS-KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 329
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G+GE +EL+++M + V+P+ TFV VL+ CAH+GLVE+ + F MT + + P +
Sbjct: 330 MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 389
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EH+GCMVD+LGR+G + EA LI M + P+A + G+L+ +CR HG+ EL E K++I
Sbjct: 390 EHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIE 449
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP NSG YVLL+N+YA GRW+D +R M + VKK+PG S+IE
Sbjct: 450 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 496
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/475 (37%), Positives = 279/475 (58%), Gaps = 3/475 (0%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMR 61
+ L LL + L QIH L+ L + + ++ C + N + YA +F+++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P+ ++N+MI+ YS + EE + L+ + + + YTF LLKAC + L Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H II+ GF ++ +Y+ G + +FD++ RD + N MI G+ K G+
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F M ER+++SW MIS +G+ EAL LFH M+ +LD +V+ L
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LG +D G+WIH+Y + + + +G L+D Y KCG L+ A VF+++ K V
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 318
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W AMISG A +GRG +E + +M GV PN+ TF G+LT C+HAGLV +A+ LF SM
Sbjct: 319 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 378
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+H P++EHYGCMVD+LGR+G ++EA +LI +M ++PNAAIWG+LL++C HG++EL
Sbjct: 379 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ K LI ++P + G Y+ L++I+A G W+ A +R M+E V K PG S+I
Sbjct: 439 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVI 493
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 282/476 (59%), Gaps = 2/476 (0%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+++I+ LL + IHA +R+ Q ++ + C + I YA++IF
Sbjct: 49 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 108
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+V L+ ++I + +G E ++L++ + + I PD Y A +LKAC LR G+
Sbjct: 109 NPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGRE 168
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH ++ GF +R+ ++ELY CG++ D +VF+EM DV+ +MI + +G
Sbjct: 169 VHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGL 227
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V++ +F +R + V W MI ++ + AL F M+ + +E T+V VL
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSA 287
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C++LGA++IG+W+HSY + + VGNAL++ Y +CG +D A+ VF E+ ++V++
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKDRDVIT 346
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+N MISGL+ NG+ +EL+ M+ + + P TFVGVL C+H GLV+ E+F SM
Sbjct: 347 YNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMA 406
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + P +EHYGCMVD+LGR G + EAYDLIR+M + P+ + G+LLS+C+ H ++EL
Sbjct: 407 RDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELG 466
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E KEL + +SG YVLLS++YA G+W +A +R M+E ++K PG S IE
Sbjct: 467 EQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 175/464 (37%), Positives = 283/464 (60%), Gaps = 7/464 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L QIHA+ LR+ L + ++ + L ++ YA +F+Q+ PSV L+N I+ +
Sbjct: 2 NQLKQIHAYSLRNGLDHTKFLIEKLLQ----LPDLPYACTLFDQIPKPSVYLYNKFIQTF 57
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G L+ + + G P++Y+F L AC + ++ GQ +H +SGF
Sbjct: 58 SSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDM 117
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++++Y G + ++FDEM RD+ N +I G+ + G ++ L LF +M R
Sbjct: 118 FAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVR 177
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWI 254
+V+SW +IS ++G+ ++AL +F + ++ + +E ++ +VLP C++LGA+DIG+ I
Sbjct: 178 NVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRI 237
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNG 313
+YA ++G ++ V NA+++ + +CG ++ A+ VF EI ++N+ SWN MI GLA +G
Sbjct: 238 EAYARNNGFFKNAY-VSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHG 296
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
R ++LY+QM+ + + P+ TFVG+L C H G+V + R+LF SM + P LEHY
Sbjct: 297 RCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHY 356
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GC+VD+LGR+G ++EAY+LI++M + P++ IWG+LL +C HG+VEL E A + L LEP
Sbjct: 357 GCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEP 416
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
WN GNYV+LSNIYA G W LR M+ ++ K G S IE
Sbjct: 417 WNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIE 460
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 275/476 (57%), Gaps = 6/476 (1%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMR 61
+L L + QIHAH +R + ++ ++ L H S CG LN YA +IFN+M
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLN---YAKEIFNRMA 541
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ +NSMI+ Y NG ++E ++LF ++ GI PD ++ + +L +C+ + D + G+
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 601
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H I+R+ E G +++ +V++Y CG MD KV+D+ +DVI+ N+M+ F G
Sbjct: 602 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ LF +M +R+ WN +++ G E+ F EM + E D T+V ++ +
Sbjct: 662 ANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 721
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C+ L A++ G +HS G V + ALVD Y KCG + AR VF + KN+VS
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS 781
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WNAMISG + +G + + LYE+M KG+ PN+ TF+ +L+ C+H GLVE+ +F SM
Sbjct: 782 WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQ 841
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++I EHY CMVD+LGR+G + +A + + M I P + WG+LL +CR H +++
Sbjct: 842 EDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMG 901
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A + L L+P N G YV++SNIYA GRW + E +R M+ VKK PG S IE
Sbjct: 902 RLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIE 957
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 182/377 (48%), Gaps = 35/377 (9%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +++ SV+ +N++I Y EE +F + +G+ PD +TFA L+ C
Sbjct: 229 AVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGA 288
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ G+ VH ++I GF+ + ++++Y C + +KVFDEM R+ + N +
Sbjct: 289 LRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSI 348
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I S+ + G ++AL LF M++ ++ +
Sbjct: 349 I-------------------------------SAEAQFGHFNDALVLFLRMQESGYKSNR 377
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+ ++L A L + G+ +H + + L ++ +G+ALVD Y KCG+++ A VF+
Sbjct: 378 FNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII-LGSALVDMYSKCGMVEEAHQVFR 436
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVE 351
+ +N VS+NA+++G G+ E +ELY M ++ G+ P++ TF +LT CA+
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDN 496
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R++ A + + I N+ +V + G + A ++ M+ R NA W S++
Sbjct: 497 QGRQIHAHLIRAN-ITKNIIVETELVHMYSECGRLNYAKEIFNRMAER-NAYSWNSMIEG 554
Query: 412 CRTHGHVELAEHAVKEL 428
+ +G + A K++
Sbjct: 555 YQQNGETQEALRLFKQM 571
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 173/377 (45%), Gaps = 34/377 (9%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+++ YA K+F +M ++ +N+MI AY+ E ++L+ ++ G + D++TF
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFP 179
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
++KAC+ + D+ + + ++++G + +V+ Y G MDD + DE+
Sbjct: 180 SVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGT 239
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
V+ N +I G+ K ++SW EA +F M
Sbjct: 240 SVVTWNAVIAGYVK------------------ILSW-------------EEAWGIFDRML 268
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D T + L +C L + D G+ +HS + G ++ VGNAL+D Y KC
Sbjct: 269 KIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCDDE 327
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
++ VF E+ +N V+WN++IS A G + L+ +M G N+ +L
Sbjct: 328 ESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMAS 387
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
A + K REL + + + ++ +VD+ + G V EA+ + RS+ + N
Sbjct: 388 AGLADIGKGRELHGHLV-RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERNEVS 445
Query: 405 WGSLLSSCRTHGHVELA 421
+ +LL+ G E A
Sbjct: 446 YNALLAGYVQEGKAEEA 462
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 134/326 (41%), Gaps = 45/326 (13%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD---GMKVFD 159
++ L++ C+ + G+ +H ++I +G+ + ++ LY G +DD K+F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
EM R++ N MI + + D Y+ E LRL
Sbjct: 134 EMPERNLTAWNTMILAYARVDD-----YM--------------------------EVLRL 162
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
+ MR D+ T +V+ C + + + + S +GL + VG ALVD Y
Sbjct: 163 YGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLF-VGGALVDGYA 221
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+ G +D A EI +VV+WNA+I+G E ++++M+ GV P+ TF
Sbjct: 222 RFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFAS 281
Query: 340 VLTCCAHAGLVEKARELFASMTGL----HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
L C + +++ + + + V N ++D+ + +
Sbjct: 282 ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN-----ALIDMYAKCDDEESCLKVFDE 336
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELA 421
M R N W S++S+ GH A
Sbjct: 337 MGER-NQVTWNSIISAEAQFGHFNDA 361
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 283/461 (61%), Gaps = 7/461 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ Q+HAH LR + ++ +L + + + YA K+F+ RNP + L+N +I++Y
Sbjct: 2 NQIKQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDLHRNPCIFLYNKLIQSY 57
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S++ E + L+ LL GI P+ +TF + A R + +H + RSGFE
Sbjct: 58 SVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS 117
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ Y G + +VFDEMS+RDV V N MI G+ ++GD+ + LF M +
Sbjct: 118 FCCTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSMPNK 177
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+V SW +IS ++G SEAL +F M +D++ + + T+V+VLP CA LG ++IG+ +
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRL 237
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNG 313
YA +G + + V NA ++ Y KCG++D A+ +F EI ++N++SWN+MI LA +G
Sbjct: 238 EGYARENGFFDNIY-VRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLATHG 296
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ + +ELY QM+ +G P+ TFVG+L C H G+V K +EL SM +H I P LEHY
Sbjct: 297 KHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLEHY 356
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GCM+D+LGR G ++EA DLI++M ++P+A +WG+LL +C HG+VE+AE A + L+ LEP
Sbjct: 357 GCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKLEP 416
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
N GN V++SNIYA +WD +R M++ + K+ G S
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>gi|242071929|ref|XP_002451241.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
gi|241937084|gb|EES10229.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
Length = 505
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/417 (43%), Positives = 254/417 (60%), Gaps = 16/417 (3%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+ +KA S + ++ +L + L+ PD TF PLL V +H ++R
Sbjct: 86 NAAVKALSASSSPDDAFRLLSTLRRFHA-PDRLTFLPLLGC---ASSFPVLSALHSLLLR 141
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD--VIVRNLMIHGFCKKGDVDKGL 186
GF I + +++ Y M +FD+M ++ + N +I K D+
Sbjct: 142 LGFLSHHPITLALLKPYP----MPHVRALFDDMPQKNKCTVAYNTLITACLKARDIRAAR 197
Query: 187 YLFREMRERSVVS-----WNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLP 240
+LF EM+ WNL+I+ +SGRD A++ F M R+ D+ T+VAVLP
Sbjct: 198 HLFDEMQRHRRSRRSVVSWNLIITGCARSGRDDMAVQCFERMVREGEVAPDDGTLVAVLP 257
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C + G G+W H YA+ SGL V V NA++D YCKCG +D+AR VF P+++VV
Sbjct: 258 ACGKTGNAGAGRWAHEYAKKSGLLEGTVHVANAVMDMYCKCGDVDSAREVFMTTPQRSVV 317
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNAMI+G + NG G G++L+++M+ GV PN TF+ VL CCAHAG V+ RE+F SM
Sbjct: 318 SWNAMITGFSLNGHGVEGIDLFQKMMRHGVEPNAVTFLAVLGCCAHAGAVDIGREIFQSM 377
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
H I P +EHYGCMVD+ GR G + EA+ LI+ M ++PNAAIWG+LLS+CR H +
Sbjct: 378 VSEHGIEPAIEHYGCMVDLFGRCGLLEEAHALIQGMPMKPNAAIWGALLSACRAHAGLGT 437
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE A+KELINLEPWNSGNYVLL+N+YAE RW++A +R MR +V K+PGQS++E
Sbjct: 438 AEVALKELINLEPWNSGNYVLLANLYAETERWEEAGEVRRLMRRMSVNKAPGQSVME 494
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
L +H +N ++ + CG ++ A ++F SV+ +N+MI +SLNG E
Sbjct: 280 LLEGTVHVANAVMDMYCK-CG---DVDSAREVFMTTPQRSVVSWNAMITGFSLNGHGVEG 335
Query: 85 VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV-------HGEIIRSGFERFGSI 137
+ LF + G+ P+ TF +L C G + +G+ + HG I E +G +
Sbjct: 336 IDLFQKMMRHGVEPNAVTFLAVLGCCAHAGAVDIGREIFQSMVSEHG--IEPAIEHYGCM 393
Query: 138 RIGVVELYTSCGQMDDGMKVFDEM 161
V+L+ CG +++ + M
Sbjct: 394 ----VDLFGRCGLLEEAHALIQGM 413
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/470 (37%), Positives = 288/470 (61%), Gaps = 16/470 (3%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +IHAH ++ L S+ ++ V +C E +YA +F ++ +P+ L+N+MI+AY
Sbjct: 4 LKKIHAHVVKFSLSXSSFLVTKMVDMCNHHGETEYANLLFKRVADPNAFLYNAMIRAYKH 63
Query: 78 NGPSEEPVKLFALL---KNLG-------IWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
N V + A+ + LG +PD++TF ++K C G+ +G+ VHG
Sbjct: 64 N-----KVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAF 118
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ G + I +VE+Y C +DD +VF+EM+ RD + N +I G + G + +
Sbjct: 119 KFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMRRARA 178
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+F E++++++ SW ++S + G + AL F M+ ELDE ++V+VLP CA+LGA
Sbjct: 179 IFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGA 238
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+++G+WIH YA+ +G R + V NAL++ Y K G +D R +F ++ ++V+SW+ MI
Sbjct: 239 LELGKWIHIYADKAGFLRDIC-VCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIV 297
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
GLA +GR +EL+++M V PN TFVG+L+ CAHAGL+ + F SM +I
Sbjct: 298 GLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIE 357
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGC+V++LG SG + +A +LI+ M ++P++ IWG L SSCR+HG++E+ A++
Sbjct: 358 PGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEH 417
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ LEP ++GNY+ LSN+YA+ G+WD +R M + K+PG S IE
Sbjct: 418 LLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIE 467
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 279/467 (59%), Gaps = 7/467 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVC-----GTLNEIKYATKIFNQMRNPSVLLFNS 70
THL IHA+ +R + + ++ C GT + I YA++IF+Q++NP++ +FN+
Sbjct: 31 THLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGT-SLIDYASRIFSQIQNPNLFIFNA 89
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
MI+ +S + ++ + + G+ PD TF L+K+C + + +G HG II+ G
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG 149
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
FE+ ++ +V +Y + G + +F M + DV+ MI GF K GDV+ LF
Sbjct: 150 FEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M E+++V+W+ MIS ++ +A+ LF ++ Q +E +V+V+ CA LGA+++
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALEL 269
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+ H Y +G+ ++ +G ALVD Y +CG +D A VF+++P ++ +SW A+I+GLA
Sbjct: 270 GERAHDYVVKNGMTLNLI-LGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLA 328
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G E ++ + M+ G++P TF VL+ C+H GLVE+ ++F SM H + P L
Sbjct: 329 MHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRL 388
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGCMVD+LGR+G + EA + M ++PNA +WG+LL +CR H + E+ E K LI
Sbjct: 389 EHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQ 448
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L P +SG YVLLSNIYA W+ +R M+ +KK PG SLIE
Sbjct: 449 LLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIE 495
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 353 bits (907), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 177/472 (37%), Positives = 279/472 (59%), Gaps = 1/472 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L L T +HL IHAH +R + +S+ N + YA ++F Q++NP++
Sbjct: 19 LSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNL 78
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
++NS I+ +S + ++ + K G+ PD T+ L+KAC G L +G HG+
Sbjct: 79 FIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQ 138
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
IIR GF+ ++ +V +Y++ G + VF +S DV+ M+ G+ K GDV
Sbjct: 139 IIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSA 198
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF +M E+++V+W++MIS K+ +A+ L+ ++ + +E +V+V+ CA L
Sbjct: 199 RKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHL 258
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+++G+ H Y + + ++ +G ALVD Y +CG +D A VF ++P ++ +SW +
Sbjct: 259 GALELGERAHDYILRNKMTVNLI-LGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTL 317
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I+G A +G E +E + +M G++P + TF VL+ C+H GLVE+ ELF SM +
Sbjct: 318 IAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYR 377
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P LEHYGCMVD+LGR+G + EA + M ++PNA IWG+LL +CR H + E+AE A
Sbjct: 378 IEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAG 437
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K LI L+P +SG YVLLSNIYA +W++ E +R M+E V K PG +L E
Sbjct: 438 KTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFE 489
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 278/475 (58%), Gaps = 3/475 (0%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMR 61
+ L LL + L QIH L+ L + + ++ C + N + YA +F+++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P+ ++N+MI+ YS + EE + L+ + + + YTF LLKAC + Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQ 139
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H II+ GF ++ +Y+ G + +FD++ RD + N MI G+ K G+
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F M ER+++SW MIS +G+ EAL LFH M+ +LD +V+ L
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LG +D G+WIH+Y + + + +G L+D Y KCG L+ A VF+++ K V
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 318
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W AMISG A +GRG +E + +M GV PN+ TF G+LT C+HAGLV +A+ LF SM
Sbjct: 319 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 378
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+H P++EHYGCMVD+LGR+G ++EA +LI +M ++PNAAIWG+LL++C HG++EL
Sbjct: 379 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ K LI ++P + G Y+ L++I+A G W+ A +R M+E V K PG S+I
Sbjct: 439 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVI 493
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 182/534 (34%), Positives = 292/534 (54%), Gaps = 62/534 (11%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I LL T + L Q+HA +R LHQ + I++ F+++C +L+ Y T +FN + +PS
Sbjct: 28 ISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPS 87
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH- 123
+L+N+ IK YS N V LF +K PD++T+ L+KAC V ++ G H
Sbjct: 88 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147
Query: 124 ------------------------GEII--RSGFERFGSIRI------------------ 139
GEI+ R F+ G +
Sbjct: 148 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE 207
Query: 140 -----------------GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
++ Y CG + K+FDEM HR+V+ MI G+ K GD+
Sbjct: 208 ARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDM 267
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
++F E ER VV+W+ +IS ++G+ +EA+++F EM + + DE +V+++ C
Sbjct: 268 ASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSAC 327
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+++G++++ +W+ Y S + V AL+D KCG +D A +F+E+P+++++S+
Sbjct: 328 SQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISY 387
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+M+ GL+ +G G V L+ +M+ +G++P+ F +LT C+ AGLV++ F SM
Sbjct: 388 CSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKT 447
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+SIVP+ +HY CMVD+LGR+G ++EAY+L++SM + P+A WG+LL +C+ H +EL E
Sbjct: 448 DYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGE 507
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+L LEP N+GNYVLLSNIYA +W D LR MRE ++K PG S I
Sbjct: 508 VVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/478 (39%), Positives = 280/478 (58%), Gaps = 5/478 (1%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
+ + L G N Q+HAH L L + L+ + V+ + +I + +FN + P
Sbjct: 75 PVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEP 134
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
S LLFNSMI+AY+ G +E V + + + G D +TF +LK+ + + + +G+CVH
Sbjct: 135 SSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVH 194
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G I+R G + + ++ LY CG+++D KVFD M+ RDV N ++ G+ K G +D
Sbjct: 195 GLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCID 254
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM--RDQAFELDEATVVAVLPI 241
L +F M R++VSW MIS +SG +AL LF EM D + T+++VLP
Sbjct: 255 AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPA 314
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNV 299
CA+L ++ G+ IH A GL SV AL Y KCG L ARN F ++ R KN+
Sbjct: 315 CAQLSTLERGRQIHELACRMGLNSNA-SVLIALTAMYAKCGSLVDARNCFDKLNRNEKNL 373
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
++WN MI+ A G G V + +MI G+ P+ TF G+L+ C+H+GLV+ + F
Sbjct: 374 IAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH 433
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M+ +SI P +EHY C+ D+LGR+G + EA L+ M + +IWGSLL++CR H ++E
Sbjct: 434 MSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLE 493
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE A ++L LEP N+GNYVLLSN+YAE GRW + + LR ++ KKSPG S IE
Sbjct: 494 MAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIE 551
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 38/401 (9%)
Query: 59 QMRNPSVLLFNSMIKAYS-------LNGPSEEPVK-------LFALLKNL------GIWP 98
+ PS LLF ++ +YS + PS P K + A L+NL P
Sbjct: 10 SIPTPSHLLFR-ILHSYSGSAHIDTVPPPSSPPFKCSISPLTISATLQNLLQPLSAPGPP 68
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
++AP+ + G+ L++G VH ++ G + + +V Y S G +D + VF
Sbjct: 69 PILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVF 128
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL- 217
+ + ++ N MI + + G ++ + + M + KS + ++
Sbjct: 129 NGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVW 188
Query: 218 --RLFHEMRDQ-AFELDEATVVAVLPICARLGAV-DIGQWIHSYAESSGLYRKVVSVGNA 273
+ H + + + D +++ + + G + D G+ + + + VS NA
Sbjct: 189 MGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDN------MTIRDVSSWNA 242
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVS 331
L+ Y K G +D A +F+ +P +N+VSW MISG + +G + + L+++M+ + GV
Sbjct: 243 LLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVR 302
Query: 332 PNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
PN T + VL CA +E+ R++ A GL+S L M G R
Sbjct: 303 PNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNC 362
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+D + N W +++++ ++GH A +E+I
Sbjct: 363 FDKLNRN--EKNLIAWNTMITAYASYGHGLQAVSTFREMIQ 401
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 179/475 (37%), Positives = 275/475 (57%), Gaps = 14/475 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R + LL + I+A +R+ HQ ++ + VC LN I YA+KIF+ +N
Sbjct: 33 RHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQN 92
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V L+ ++I L+ + + L+ + N + PD Y +LKAC L+ G+ V
Sbjct: 93 PNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREV 152
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++++ G SIRI ++ELY CG +D +VFDEM RDV+ +MI+ +
Sbjct: 153 HSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYY-----F 207
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
D G+ + V W MI L ++G + AL +F M+ + +E T+V VL C
Sbjct: 208 DHGI--------KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSAC 259
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ LGA+ +G+W+ SY + + VG AL++ Y +CG +D A+ VF+++ KNV+++
Sbjct: 260 SELGALQLGRWVRSYMDKHRIELNHF-VGGALINMYSRCGDIDEAQRVFEQMKEKNVITY 318
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N+MI G A +G+ VEL+ +I +G +P+ TFVGVL C+H GL E E+F SM
Sbjct: 319 NSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAK 378
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EHYGCMVD+LGR G + EAY IR M + P+ + G+LLS+C+ HG++ELAE
Sbjct: 379 DYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAE 438
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L+ + +SG Y+LLSN Y+ G+W +A +R MRE ++K PG S IE
Sbjct: 439 RVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIE 493
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 284/477 (59%), Gaps = 5/477 (1%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT---LNEIKYATKIFNQMR 61
IL + + L Q HAH L+ L S + ++ T I YA IF+++
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+ ++N++I+AY+ + E + +F + + + PD+YTF LK+C + G+
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG ++++G I+ ++ LY SCG ++D + D M RDV+ N ++ + ++G
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGL 189
Query: 182 VD-KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
++ +F E ++VVSWN MI+ +GR SE L LF +M+ + D T+V+VL
Sbjct: 190 MELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLS 249
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA +GA+ G+W+H+Y + +G+ V ALVD Y KCG ++ A VF RK++
Sbjct: 250 ACAHVGALSQGEWVHAYIDKNGISIDGF-VATALVDMYSKCGSIEKALEVFNSCLRKDIS 308
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+WN++ISGL+ +G G+ ++++ +M+ +G PN+ TFV VL+ C+ AGL+++ RE+F M
Sbjct: 309 TWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLM 368
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+H I P +EHYGCMVD+LGR G + EA +L++ M + + +W SLL +CR HG+VEL
Sbjct: 369 VHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVEL 428
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE ++L+ L P S ++V LSN+YA GRW D +R MR V+K PG S+IE
Sbjct: 429 AERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIE 485
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 278/482 (57%), Gaps = 5/482 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI---KYATKIF 57
+E +++R+L ++ ++HA L QS+ +L + + L + Y +F
Sbjct: 7 LEWEVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLF 66
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+Q+ P+ + ++I+AY+L GP + + ++ ++ + P +TF+ L AC V
Sbjct: 67 SQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSA 126
Query: 118 VGQCVHGE-IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+G +H + ++ GF + V+++Y CG + VFDEM RDVI +I +
Sbjct: 127 LGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAY 186
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ GD+ LF + + +V+W M++ ++ +AL +F +RD+ E+DE T+V
Sbjct: 187 TRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLV 246
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+ CA+LGA WI AESSG V VG+AL+D Y KCG ++ A +VFK +
Sbjct: 247 GVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMR 306
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+NV S+++MI G A +GR ++L+ M+ GV PN TFVGVLT C+HAGLV++ ++
Sbjct: 307 ERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQ 366
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
LFASM + + P E Y CM D+L R+G + +A L+ +M + + A+WG+LL + H
Sbjct: 367 LFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVH 426
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+ ++AE A K L LEP N GNY+LLSN YA GRWDD +R +RE N+KK+PG S
Sbjct: 427 GNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSW 486
Query: 476 IE 477
+E
Sbjct: 487 VE 488
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 291/488 (59%), Gaps = 24/488 (4%)
Query: 13 NTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN----EIKYATKIFNQMRNPSVL 66
N RT L+QIHA F++ + L A + C T + ++ YA KIFNQM +
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 67 LFNSMIKAYSLNGPSEEPVKL---FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+N++I+ +S + + + + + ++ + + P+ +TF +LKAC G ++ G+ +H
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDG------------MKVFDEMSHRD--VIVR 169
G ++ GF + +V +Y CG M D M V + RD +++
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N+MI G+ + GD LF +MR+RSVVSWN MIS +G +A+ +F EM+
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+ T+V+VLP +RLG++++G+W+H YAE SG+ V +G+AL+D Y KCGI++ A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKAIH 330
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF+ +PR+NV++W+AMI+G A +G+ ++ + +M GV P+ ++ +LT C+H GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
VE+ R F+ M + + P +EHYGCMVD+LGRSG + EA + I +M I+P+ IW +LL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+CR G+VE+ + L+++ P +SG YV LSN+YA G W + +R+ M+E +++K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 470 SPGQSLIE 477
PG SLI+
Sbjct: 511 DPGCSLID 518
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/460 (39%), Positives = 271/460 (58%), Gaps = 10/460 (2%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-PSVLLFNSMIKAYSLNGPSEEP 84
L L NL+L+ F+ C +L YA +F + + P + L+N++IKA S + P+
Sbjct: 2 LLRALDTDNLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALS-SSPTHPK 60
Query: 85 VKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
+F L N+ G+ PD Y+F LKA ++ G+ +H + IR G +
Sbjct: 61 ASIF-LYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAF 119
Query: 142 VELYTSCGQ--MDDGMKVFD--EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
V++Y+S G + D K+FD MS DV + N M++G+ K GD+ LF M +R+V
Sbjct: 120 VQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNV 179
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+SW +I+ ++ R +A+ LF M+ + E DE ++ L CARLGA+++G+WI Y
Sbjct: 180 ISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHY 239
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ GL + + NAL+D Y K G + +A VF+ + K +++W MI+GLA +G G
Sbjct: 240 IDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTE 299
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+E++ +M V PN TF+ +L+ C+H GLV+ R F M + I P +EHYGCM+
Sbjct: 300 ALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMI 359
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G ++EA L+ M PNA IWGSLL++C THG EL E A++ L+ LEP NSG
Sbjct: 360 DLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSG 419
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NY LLSNIYA GRW+++ +R M + VKK PG SLIE
Sbjct: 420 NYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIE 459
>gi|125535277|gb|EAY81825.1| hypothetical protein OsI_36997 [Oryza sativa Indica Group]
Length = 515
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/414 (45%), Positives = 256/414 (61%), Gaps = 17/414 (4%)
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
IKA S + P +L + L+ L PD +F PLL V L + VH ++R GF
Sbjct: 102 IKALSASSPPLA-FRLLSSLRRLHA-PDRLSFLPLLGC---VSSLSLLSAVHALLLRLGF 156
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLF 189
+I + +++ Y + +FDEM+ R+ + N +I + D+ +LF
Sbjct: 157 LSHHAISLALLKPYP----LHYARVLFDEMTQRNKCTVAYNTLITACFRADDLGAARHLF 212
Query: 190 REMRERSVVS-----WNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICA 243
EM+ WN+MI+ +D A+ F M R+ D+ T+ AVLP+C
Sbjct: 213 DEMQRYRRSRRSVVSWNVMIAGCAWCKKDDIAVLCFERMVREGEVAPDDGTLAAVLPVCG 272
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
RLG V +G+W H +A SGL + V V NA++D YCKCG + +AR VFK + +++VVSWN
Sbjct: 273 RLGNVGVGRWAHEHARKSGLLDRKVHVANAVMDMYCKCGDVHSAREVFKGMRQRSVVSWN 332
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MISG + NG G G+ELY +M G PN+ TF+GVL CCAHAG V+ R++F SM
Sbjct: 333 TMISGFSLNGHGIEGIELYREMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLE 392
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
H I P +EHYGCMVD+LGRSG + EAY LI+ M +RPNAAIWG+LLS+C H + +AE
Sbjct: 393 HGIEPVIEHYGCMVDLLGRSGLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEV 452
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A+KELINLEPWNSGNYVLL+N+YAE GRW++A R MR +V+K+PGQSLIE
Sbjct: 453 ALKELINLEPWNSGNYVLLANLYAETGRWEEAGDARRLMRRMSVQKAPGQSLIE 506
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 287/507 (56%), Gaps = 35/507 (6%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT---LNEIKYATKIFNQMR 61
IL + + L Q HAH L+ L S + ++ T I YA IF+++
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+ ++N++I+AY+ + E + +F + + + PD+YTF LK+C + G+
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG ++++G I+ ++ LY SCG ++D + D M RDV+ N ++ + ++G
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGL 189
Query: 182 VDKGLYLFREMRERSV-------------------------------VSWNLMISSLGKS 210
++ +LF EM ER+V VSWN MI+ +
Sbjct: 190 MELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHA 249
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
GR SE L LF +M+ + D T+V+VL CA +GA+ G+W+H+Y + +G+ V
Sbjct: 250 GRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGF-V 308
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
ALVD Y KCG ++ A VF RK++ +WN++ISGL+ +G G+ ++++ +M+ +G
Sbjct: 309 ATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGF 368
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN+ TFV VL+ C+ AGL+++ RE+F M +H I P +EHYGCMVD+LGR G + EA
Sbjct: 369 KPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAE 428
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+L++ M + + +W SLL +CR HG+VELAE ++L+ L P S ++V LSN+YA G
Sbjct: 429 ELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMG 488
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
RW D +R MR V+K PG S+IE
Sbjct: 489 RWKDVMEVRQKMRAQGVRKDPGCSMIE 515
>gi|326507244|dbj|BAJ95699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 524
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/407 (45%), Positives = 252/407 (61%), Gaps = 17/407 (4%)
Query: 81 SEEPVKLFALLKNLGIW--PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ P F LL +L PD +F PLL L + HG ++R GF +I
Sbjct: 111 ASSPPLAFRLLSSLRRLHAPDRLSFLPLLGP---TSSLPLLSAFHGLLLRLGFLSHHAIS 167
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLFREMRE-- 194
+ ++ Y ++ +FDEM + I N +I + K D+ +LF EM+
Sbjct: 168 LALLRPY----RLPHVRILFDEMPQQRKCTIAYNTLITAYVKAKDIFTARHLFDEMQRFK 223
Query: 195 ---RSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDI 250
RS+VSWN MIS GRD A+R F +M R+ D+ T+ AVLP C R+G
Sbjct: 224 RSRRSMVSWNAMISGCTWCGRDDMAVRYFQDMVREGKVAPDDGTLAAVLPACGRIGNAGA 283
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+W H YA G+ V V NA+VD YCKCG++++AR VF+ + +++VVSWN MISG +
Sbjct: 284 GRWAHEYACKKGILDISVHVANAVVDMYCKCGVVNSAREVFEGMQQRSVVSWNTMISGFS 343
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG+G G+EL+ QM+ G PN TF+GVL CCAHAG V+ + +F +M H I +
Sbjct: 344 LNGQGIKGIELFRQMVRSGGEPNSVTFLGVLGCCAHAGAVDTGQLIFQTMQSEHGIEAGI 403
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGCMVD+LGRSG + EA+ LI+ M + PN+AIWGSLLS+CR H + +AE A+KELI+
Sbjct: 404 EHYGCMVDLLGRSGLLEEAHALIQGMRMSPNSAIWGSLLSACRAHAGLGIAEVALKELIS 463
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEPWNSGNY+LL+N+YAE RWD+A +R MR +V+K+PGQSLIE
Sbjct: 464 LEPWNSGNYMLLANLYAETQRWDEAGDVRKLMRRMSVQKAPGQSLIE 510
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 174/476 (36%), Positives = 281/476 (59%), Gaps = 2/476 (0%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+++I+ LL + IHA +R+ Q ++ + C + I YA++IF
Sbjct: 49 QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 108
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+V L+ ++I + +G + ++L++ + + I PD Y A +LKAC LR G+
Sbjct: 109 NPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE 168
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH ++ G +R+ ++ELY CG++ D +VF+EM DV+ +MI + +G
Sbjct: 169 VHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGL 227
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V++ +F +R + V W MI ++ + AL F M+ + +E T+V VL
Sbjct: 228 VEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSA 287
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C++LGA++IG+W+HSY + + VGNAL++ Y +CG +D A+ VF E+ ++V++
Sbjct: 288 CSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKDRDVIT 346
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+N MISGL+ NG+ +EL+ MI + + P TFVGVL C+H GLV+ ++F SMT
Sbjct: 347 YNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMT 406
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + P +EHYGCMVD+LGR G + EAYDLIR+M + P+ + G+LLS+C+ H ++EL
Sbjct: 407 RDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELG 466
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E K L + +SG YVLLS++YA G+W +A +R M+E ++K PG S IE
Sbjct: 467 EQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 522
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 263/442 (59%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF + CG E+ ++F + V+ +NSMI A+ G EE ++LF ++ +
Sbjct: 177 LIHFYAKCG---ELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNV 233
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ T +L AC D G+ VH I R+ ++ ++++YT CG ++D +
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKR 293
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD+M +D++ M+ G+ K G+ D +F M + + +WN +IS+ + G+ EA
Sbjct: 294 LFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEA 353
Query: 217 LRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L LFHE++ + + DE T+V+ L CA+LGA+D+G WIH Y + G+ + + +L+
Sbjct: 354 LELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGM-KLNCHLTTSLI 412
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D YCKCG L A VF + RK+V W+AMI+GLA +G G+ + L+ +M V PN
Sbjct: 413 DMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAV 472
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF +L C+H GLVE+ R F M ++ ++P ++HY CMVD+LGR+G + EA +LI
Sbjct: 473 TFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEK 532
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P A++WG+LL +C H +V LAE A +LI LEP N G YVLLSNIYA+ G+WD
Sbjct: 533 MPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRV 592
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR MR+ +KK PG S IE
Sbjct: 593 SGLRKLMRDVGLKKEPGCSSIE 614
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 210/452 (46%), Gaps = 79/452 (17%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
L L+ + L QIHA LR L S LI A +S +L+ YA ++F+Q+
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLD---YAQQVFDQI 95
Query: 61 RNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+P++ +N++I+AY S + P + + +L +PD++TF L+KA + +L G
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ HG +I+ I ++ Y CG++ G +VF + RDV+ N MI F +
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG 215
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G ++ L LF+EM ++V + + T+V VL
Sbjct: 216 GCPEEALELFQEMETQNV-------------------------------KPNGITMVGVL 244
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+ + G+W+HSY E + + + +++ NA++D Y KCG ++ A+ +F ++P K++
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRI-GESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303
Query: 300 VS-------------------------------WNAMISGLAFNGRGELGVELYEQM-IA 327
VS WNA+IS G+ + +EL+ ++ ++
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLS 363
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKAR--ELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
K P++ T V L+ CA G ++ ++ G+ N ++D+ + G
Sbjct: 364 KTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKL---NCHLTTSLIDMYCKCGD 420
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+++A + S+ R + +W ++++ HGH
Sbjct: 421 LQKALMVFHSVE-RKDVFVWSAMIAGLAMHGH 451
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 279/459 (60%), Gaps = 7/459 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+ Q+HAH LR + ++ +L + + + YA K+F+ +N L+N +I+AY +
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ E + L+ LL G+ P +TF + A R + +H + RSGFE
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ Y G + +VFDEMS RDV V N MI G+ ++GD+ + LF M ++V
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SW +IS ++G SEAL++F M +D++ + + TVV+VLP CA LG ++IG+ +
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRG 315
YA +G + + V NA ++ Y KCG++D A+ +F+E+ ++N+ SWN+MI LA +G+
Sbjct: 240 YARENGFFDNIY-VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ + L+ QM+ +G P+ TFVG+L C H G+V K +ELF SM +H I P LEHYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
M+D+LGR G ++EAYDLI++M ++P+A +WG+LL +C HG+VE+AE A + L LEP N
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
GN V++SNIYA +WD +R M++ + K+ G S
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 183/468 (39%), Positives = 282/468 (60%), Gaps = 4/468 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPSVLLFNS 70
T L +IHAH L+ L + L ++ ++ C T +I YA +F Q+ +P++ +N+
Sbjct: 35 TTMKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNT 94
Query: 71 MIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+I+ +S + + LF +L + P T+ + KA +G G +HG +I+
Sbjct: 95 IIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKL 154
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G + IR ++ +Y +CG + + K F E D++ N MI G K G+VD+ LF
Sbjct: 155 GLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLF 214
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
EM R+ VSWN MIS ++GR EAL LF +M+++ + E T+V++L ARLGA+
Sbjct: 215 DEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALK 274
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+WIH Y + V+ V +++D YCKCG + A VF+ P K + SWN MI GL
Sbjct: 275 QGEWIHDYIRKNNFELNVI-VTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGL 333
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A NG ++L+ ++ + P+ TFVGVLT C ++GLV+KA+E F+ M+ + I P+
Sbjct: 334 AMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPS 393
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
++HY CMVD LGR+G + EA +LIR+M + P+A IW SLLS+CR HG+VELA+ A K ++
Sbjct: 394 IKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIV 453
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L+ +S YVLLSNIYA ++++A R+ M+E ++K PG SLIE
Sbjct: 454 DLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIE 501
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 271/460 (58%), Gaps = 2/460 (0%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
T +H ++ IL V G ++ A ++F + V+ +NSMI A++
Sbjct: 146 TAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQG 205
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E+ ++LF ++ + P+ T +L AC DL G+ V I R G + ++
Sbjct: 206 NCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLC 265
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++YT CG +DD K+FDEM RDV +M+ G+ K GD D +F M + +
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+WN++IS+ ++G+ EAL +F+E++ + + DE T+V+ L CA+LGA+D+G WIH Y
Sbjct: 326 AWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVY 385
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ G+ + ++LVD Y KCG L+ A VF + ++V W+AMI+GL +GRG+
Sbjct: 386 IKREGIVLNCHLI-SSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
++L+ +M V PN TF VL C+HAGLV++ R F M ++ +VP ++HY CMV
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMV 504
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + EA +LI MS P+A++WG+LL +C H +VEL E A +L+ LEP N G
Sbjct: 505 DILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHG 564
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNIYA+ GRW+ LR MR+ +KK PG S IE
Sbjct: 565 AIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIE 604
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 75/451 (16%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTLNEIKYATKIFN 58
+IL + ++ L ++HA LR L S L A +S TL+ YA +F+
Sbjct: 27 QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLD---YARNLFD 83
Query: 59 QMRNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
Q+ P++ +N++I+AY S + P + V LL P+++TF ++KA + R
Sbjct: 84 QIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASR 143
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
VG VHG I+ F I +V Y +CG + ++F +S +DV+ N MI F
Sbjct: 144 VGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFA 203
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+ + L LF +M +V+ + T+V
Sbjct: 204 QGNCPEDALELFLKMERENVMP-------------------------------NSVTMVG 232
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
VL CA+ ++ G+W+ SY E G+ + +++ NA++D Y KCG +D A+ +F E+P +
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGI-KVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPER 291
Query: 298 NVVSWNAMISGLA-------------------------------FNGRGELGVELYEQM- 325
+V SW M+ G A NG+ + + ++ ++
Sbjct: 292 DVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQ 351
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
++K P++ T V L+ CA G ++ + + IV N +VD+ + G
Sbjct: 352 LSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKR-EGIVLNCHLISSLVDMYAKCGS 410
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ +A ++ S+ R + +W ++++ HG
Sbjct: 411 LEKALEVFYSVEER-DVYVWSAMIAGLGMHG 440
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 247/385 (64%), Gaps = 3/385 (0%)
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
G P+E TF L AC L G+ +H I+SGF+ +V++Y G +
Sbjct: 5 GCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLA 64
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
+VFDEM+ RD+ N +I G+ + GD++ L LF+ M RSVVSW MIS ++G +
Sbjct: 65 RQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYT 124
Query: 215 EALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+AL +F +M +D+ +E T+ +V CA+LGA+++G+ I SYA +GL + + V N
Sbjct: 125 KALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLY-VSNT 183
Query: 274 LVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
L++ Y +CG +D AR+VF EI R+N+ SWN+M+ GLA +GR ++LY+QM+ +G+ P
Sbjct: 184 LLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEP 243
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
+ TFVG++ C H GLV K +LF SM SIVP LEHYGCMVD+LGR+G ++EAYDL
Sbjct: 244 DDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDL 303
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
++SM ++P++ IWG+LL +C H +VE AE A + L +EPWN GNYV+L NIYA RW
Sbjct: 304 VKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRW 363
Query: 453 DDAETLRMWMRENNVKKSPGQSLIE 477
D LR M+ + K+ G S+IE
Sbjct: 364 DGVAKLRKLMKGGQITKAAGYSVIE 388
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 139/345 (40%), Gaps = 72/345 (20%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LLHG+ IH HF++ L V + L + A ++F++M +
Sbjct: 26 LLHGK-------VIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPT 78
Query: 68 FNSMIKAYSLNGPSEEPVKLFALL--------------------------------KNLG 95
+NS+I YS +G E ++LF L+ K+
Sbjct: 79 WNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKE 138
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+E T A + AC +G L VG+ + +G + + ++E+Y CG++D
Sbjct: 139 VRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYARCGKIDAAR 198
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
VF+E+ R R++ SWN M+ L GR +E
Sbjct: 199 HVFNEIGKR------------------------------RNLCSWNSMMMGLAVHGRSNE 228
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNAL 274
AL+L+ +M + E D+ T V ++ C G V G Q S + + K+ G +
Sbjct: 229 ALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYG-CM 287
Query: 275 VDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELG 318
VD + G L A ++ K +P K + V W ++ +F+ E
Sbjct: 288 VDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFA 332
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 262/441 (59%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + CG +N YA +F++M V+ +N+MI+ Y G +E KLF +K+ +
Sbjct: 155 LMDMYAACGRIN---YARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNV 211
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE ++ AC G++R + ++ +I + + +V +Y G MD M+
Sbjct: 212 MPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAME 271
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
F +MS R++ V M+ G+ K G +D +F + + +V W MIS+ +S EA
Sbjct: 272 FFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEA 331
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
LR+F EM + D T+++V+ C LG +D +W+H Y +GL V+ + NAL++
Sbjct: 332 LRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGL-ESVLPIDNALIN 390
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG LD AR+VF+++P +NVVSW++MI+ A +G + L+ QM + V PN+ T
Sbjct: 391 MYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVT 450
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FVGVL C+H+GLVE+ +++FASMT ++I P +EHYGCMVD+ GR+ +REA ++I SM
Sbjct: 451 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESM 510
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ PN IWGSL+S+CR HG +EL E A K ++ LEP + G VL+SNIYA RWD
Sbjct: 511 PMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVR 570
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M + V K G S I+
Sbjct: 571 IIRWIMEKKKVFKEKGLSRID 591
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 214/438 (48%), Gaps = 18/438 (4%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-P 63
IL L + H+ Q+HAH LR ++ +S + + YA +F+ + P
Sbjct: 18 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLP 77
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++FNS+++ S +G + + ++++G D +F P+LKA V L G +H
Sbjct: 78 ESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELH 137
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G + + G++++Y +CG+++ VFDEMS RDV+ N MI +C+ G +D
Sbjct: 138 GFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLD 197
Query: 184 KGLYLFREMRERSVVSWNL----MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ LF EM++ +V+ + ++S+ G++G ++ + + +D + A++
Sbjct: 198 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+ A G +D+ L+ V A+V Y K G LD AR +F + K++
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLF-----VSTAMVSGYSKAGRLDDARVIFDQTEMKDL 312
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--F 357
V W MIS A + + + ++E+M G+ P+ T + V++ C + G ++KA+ + +
Sbjct: 313 VCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRY 372
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GL S++P ++++ + G + A D+ M R N W S++++ HG
Sbjct: 373 THLNGLESVLPI---DNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGE 428
Query: 418 V--ELAEHAVKELINLEP 433
L+ A + N+EP
Sbjct: 429 ASDSLSLFAQMKQENVEP 446
>gi|115486591|ref|NP_001068439.1| Os11g0673000 [Oryza sativa Japonica Group]
gi|77552474|gb|ABA95271.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113645661|dbj|BAF28802.1| Os11g0673000 [Oryza sativa Japonica Group]
Length = 515
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 187/414 (45%), Positives = 255/414 (61%), Gaps = 17/414 (4%)
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
IKA S + P +L + L+ L PD +F PLL V L + VH ++R GF
Sbjct: 102 IKALSASSPPLA-FRLLSSLRRLHA-PDRLSFLPLLGC---VSSLSLLSAVHALLLRLGF 156
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLF 189
+I + +++ Y + +FDEM+ R+ + N +I + D+ +LF
Sbjct: 157 LSHHAISLALLKPYP----LHYARVLFDEMTQRNKCTVAYNTLITACFRADDLGAARHLF 212
Query: 190 REMRERSVVS-----WNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICA 243
EM+ WN+MI+ +D A+ F M R+ D+ T+ AVLP+C
Sbjct: 213 DEMQRYRRSRRSVVSWNVMIAGCAWCKKDDIAVLCFERMVREGEVAPDDGTLAAVLPVCG 272
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
RLG V +G+W H +A SGL + V V NA++D YCKCG + +AR VFK + +++VVSWN
Sbjct: 273 RLGNVGVGRWAHEHARKSGLLDRKVHVANAVMDMYCKCGDVHSAREVFKGMRQRSVVSWN 332
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MISG + NG G G+ELY +M G PN+ TF+GVL CCAHAG V+ R++F SM
Sbjct: 333 TMISGFSLNGHGIEGIELYREMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLE 392
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
H I P +EHYGCMVD+ GRSG + EAY LI+ M +RPNAAIWG+LLS+C H + +AE
Sbjct: 393 HGIEPVIEHYGCMVDLFGRSGLLEEAYALIQGMPMRPNAAIWGALLSACHAHSGISIAEV 452
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A+KELINLEPWNSGNYVLL+N+YAE GRW++A R MR +V+K+PGQSLIE
Sbjct: 453 ALKELINLEPWNSGNYVLLANLYAETGRWEEAGDARRLMRRMSVQKAPGQSLIE 506
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 280/463 (60%), Gaps = 4/463 (0%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L +IHA ++ L + + + ++ C + +I YA +F Q+RNP++ ++N++I+ +S
Sbjct: 12 LQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFS 71
Query: 77 LNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ + LF + + P T+ + KA +G G +HG +I+ G E
Sbjct: 72 QSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLEND 131
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
I+ ++ +Y +CG + + ++FD + DV+ N MI G K G++DK LF +M
Sbjct: 132 QFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLL 191
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
R+ VSWN MIS + GR EA+ LF M+++ + E T+V++L CA LGA+ G+WI
Sbjct: 192 RNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWI 251
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H Y + + + A++D Y KCG +D A VFK P+K + WN++I GLA +GR
Sbjct: 252 HDYIVKNNFALNSIVI-TAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGR 310
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G V L+ ++ + + P+ +F+GVLT C HAG+V++A++ F M+ + I P+++HY
Sbjct: 311 GNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYS 370
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVDVLGR+G + EA +LI+SM + P+A IWGSLLSSCR +G++E+A+ A K + L+P
Sbjct: 371 CMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNELDPN 430
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
S +++LLSN+YA +++A R+ ++E + K PG SLIE
Sbjct: 431 ESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIE 473
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 188/502 (37%), Positives = 287/502 (57%), Gaps = 40/502 (7%)
Query: 13 NTRTHLTQIHAH-----FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
N L QIHA F ++ LI A +++ G +N YA ++F Q+ P + +
Sbjct: 24 NNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTISGAIN---YAHQVFAQITEPDIFM 80
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+M++ S + + V L+ ++N G+ PD++TF+ LLK C + + G CVHG+++
Sbjct: 81 WNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVL 140
Query: 128 RSGFERFGSIRIGVVELYTSC-------------------------------GQMDDGMK 156
+ GFE +R ++ +++C G++ +
Sbjct: 141 KYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQ 200
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FDEM +D++ N+MI G+ K G+++ LF E E+ VV+WN MI+ G +A
Sbjct: 201 IFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQA 260
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L +F EMR+ DE T++++L CA LG + +G+ +H V +GNALVD
Sbjct: 261 LEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVD 320
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKA 335
Y KCG ++ A VFK++ K+V +WN++I GLAF+G E ++L+ +M A K + PN+
Sbjct: 321 MYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEI 380
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TFVGV+ C+HAG VE+ R F M + I PN+ H+GCMVD+LGR+G + EA++LI
Sbjct: 381 TFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAK 440
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I PNA IW +LL +CR HG+VEL A + L+ L SG+YVLLSNIYA G WD A
Sbjct: 441 MEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGA 500
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
E +R M + V+K G+SLIE
Sbjct: 501 EEVRKLMDDGGVRKEAGRSLIE 522
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/462 (37%), Positives = 274/462 (59%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++H H ++ + + L H S+ G E+ A +F++ V+ +N MI Y+
Sbjct: 140 ELHDHIVKLGFSSNVFVQNALIHLYSLSG---EVSVARGVFDRSSKGDVVTWNVMISGYN 196
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ +E +KLF ++ + + P T +L AC + DL VG+ VH + E
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y +CG MD + +FD M RDVI ++ GF G V F +M ER
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSW MI + R E L LF EM+ + DE T+V++L CA LGA+++G+WI +
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKA 376
Query: 257 YAESSGLYRKVVS-VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + + + K+ S VGNAL+D Y CG ++ A +F +P ++ +SW A+I GLA NG G
Sbjct: 377 YIDKNEI--KIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E ++++ QM+ ++P++ T +GVL C H+G+V+K ++ FA MT H I PN+ HYGC
Sbjct: 435 EEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGC 494
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G ++EA+++I++M ++PN+ +WGSLL +CR H E+AE A ++++ LEP N
Sbjct: 495 MVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPEN 554
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL NIYA RW+ +R M + +KK+PG SLIE
Sbjct: 555 GAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIE 596
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 202/453 (44%), Gaps = 75/453 (16%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRNP 63
L L+ + L QIH+ + L + ++ A ++ C L +++YA +F+ M P
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ ++N+MIK YS G V ++ + G+ PDEYT+ LLK ++ G+ +H
Sbjct: 83 NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
I++ GF ++ ++ LY+ G++ VFD S DV+ N+MI G+ + D
Sbjct: 143 DHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFD 202
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ + LF EM V+ ++ T+V+VL C+
Sbjct: 203 ESMKLFDEMERMRVLPSSI-------------------------------TLVSVLSACS 231
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT----------------- 286
+L +++G+ +H Y + + V + NAL+D Y CG +DT
Sbjct: 232 KLKDLNVGKRVHRYVKDLKI-EPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWT 290
Query: 287 --------------ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
ARN F ++P ++ VSW AMI G R + + L+ +M A + P
Sbjct: 291 AIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKP 350
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASM----TGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
++ T V +LT CAH G +E + A + + S V N ++D+ G V +
Sbjct: 351 DEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGN-----ALIDMYFNCGNVEK 405
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
A + +M R + W +++ +G+ E A
Sbjct: 406 AIRIFNAMPHRDKIS-WTAVIFGLAINGYGEEA 437
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 250/386 (64%), Gaps = 1/386 (0%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
++ + PD +T + +LKACL + D+ G+ +HG + GF ++ ++ LY CG+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
M D M +F++M RD + N++I K+GD+D F M ++V SW MIS +
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G+ +EA+ LF ++ D+A +E TVV+VL CA LG +D+G+ +H Y+ SG +++ V V
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG-FKRNVHV 179
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
N L+D Y KCG L+ AR VF E+ + VVSW+AMI+GLA +G+ E + L+ +MI GV
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV 239
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN TF+G+L C+H GL+++ R FASMT + ++P +EHYGC+VD+ R+G + EA+
Sbjct: 240 KPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAH 299
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+ I SM I+PN +WG+LL C+ H +++LAE A+K L L+P N G YV++SNIYAE
Sbjct: 300 EFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAE 359
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLI 476
RW+DA +R M++ VKK+ G S I
Sbjct: 360 RWEDAARVRKLMKDRGVKKTSGWSSI 385
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 35/306 (11%)
Query: 23 AHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
A L K+ Q + + + V + +I A F +M N +V + SMI + G
Sbjct: 64 AMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKP 123
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
E + LF L++ + P+E T +L AC +GDL +G+ VH +SGF+R + +
Sbjct: 124 NEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTL 183
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+++Y CG +++ +VF EM R V+ + MI G G ++ L LF EM + V
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV---- 239
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAES 260
+ + T + +L C+ +G +D G ++ S
Sbjct: 240 ---------------------------KPNGVTFIGLLHACSHMGLIDEGRRFFASMTAD 272
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGV 319
G+ ++ G +VD + + G+L+ A +P + N V W A++ G + +L
Sbjct: 273 YGVIPQIEHYG-CVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAE 331
Query: 320 ELYEQM 325
E + +
Sbjct: 332 EAIKHL 337
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/480 (38%), Positives = 271/480 (56%), Gaps = 12/480 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNP 63
+ LL+ T + QIHA + + + FV+ N + YA K+ N NP
Sbjct: 13 ISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNP 72
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKACLGVGDLR 117
++ NSMI+AYS S P K F N+ + PD YTF L++ C +
Sbjct: 73 TLFTLNSMIRAYS---KSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHV 129
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G CVHG +I+ GFE ++ G+V +Y G + VFD D++ + M++
Sbjct: 130 TGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACA 189
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K GD+D +F EM ER V+WN MI+ + GR EAL +FH M+ + +L+E ++V
Sbjct: 190 KCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVL 249
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
VL C L +D G+W+H+Y E + R V++G ALVD Y KCG +D A VF + +
Sbjct: 250 VLSACTHLQVLDHGRWVHAYVERYKV-RMTVTLGTALVDMYAKCGNVDRAMQVFWGMKER 308
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
NV +W++ I GLA NG GE ++L+ M +GV PN TF+ VL C+ GLVE+ R+ F
Sbjct: 309 NVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHF 368
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM ++ I P LEHYG MVD+ GR+G ++EA + I SM +RP+ W +LL +CR + +
Sbjct: 369 DSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKN 428
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EL E A ++++ LE N G YVLLSNIYA+ W+ +LR M+ VKK PG S+IE
Sbjct: 429 KELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIE 488
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 285/475 (60%), Gaps = 5/475 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+ ++ +L H+ IHA +R Q ++ + VC TL+ + YA +F+ + N
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V L+ +MI + +G S + V L+ + + + PD Y +LKAC DL+V + +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++++ GF S+ + ++E+Y G++ + K+FDEM RD + +MI+ + + G +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ L LF++++ + V W MI L ++ ++AL LF EM+ + +E T V VL C
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ LGA+++G+W+HS+ E+ + VGNAL++ Y +CG ++ AR VF+ + K+V+S+
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNF-VGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MISGLA +G + + M+ +G PN+ T V +L C+H GL++ E+F SM
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ ++ P +EHYGC+VD+LGR G + EAY I ++ I P+ + G+LLS+C+ HG++EL E
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L E +SG YVLLSN+YA G+W ++ +R MR++ ++K PG S IE
Sbjct: 445 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 267/446 (59%), Gaps = 6/446 (1%)
Query: 32 QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL 91
QS LI + + CG + + ++ +F++M + V+ +N MI YS N + +KL+ +
Sbjct: 154 QSALIAMY--AACGRIMDARF---LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM 208
Query: 92 KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
K G PD +L AC G+L G+ +H I +GF I+ +V +Y +CG M
Sbjct: 209 KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAM 268
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
+V+D++ + ++V M+ G+ K G V ++F M E+ +V W+ MIS +S
Sbjct: 269 HLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESY 328
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+ EAL+LF+EM+ + D+ T+++V+ CA +GA+ +WIH+YA+ +G R + +
Sbjct: 329 QPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGR-TLPIN 387
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+D Y KCG L AR VF+ +PRKNV+SW++MI+ A +G + + L+ +M + +
Sbjct: 388 NALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIE 447
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN TF+GVL C+HAGLVE+ ++ F+SM H I P EHYGCMVD+ R+ +R+A +
Sbjct: 448 PNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAME 507
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
LI +M PN IWGSL+S+C+ HG +EL E A L+ LEP + G V+LSNIYA+ R
Sbjct: 508 LIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKR 567
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WDD +R M+ V K S IE
Sbjct: 568 WDDVGLVRKLMKHKGVSKEKACSRIE 593
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 219/441 (49%), Gaps = 25/441 (5%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSV-----CGTLNEIKYATKIFNQMRN 62
LL T H+ QIHA LR K+ SNL+L V + + + YA +F+ + N
Sbjct: 18 LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPN 77
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P N +++ +S E + L+ L+ G D ++F PLLKA + L +G +
Sbjct: 78 PPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEI 137
Query: 123 HGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
HG + GF I+ ++ +Y +CG++ D +FD+MSHRDV+ N+MI G+ +
Sbjct: 138 HGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAH 197
Query: 182 VDKGLYLFREMR----ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
D L L+ EM+ E + ++S+ +G S + ++D F + +
Sbjct: 198 YDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTS 257
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
++ + A GA+ + + ++ S K + V A++ Y K G++ AR +F + K
Sbjct: 258 LVNMYANCGAMHLAREVYDQLPS-----KHMVVSTAMLSGYAKLGMVQDARFIFDRMVEK 312
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--E 355
++V W+AMISG A + + ++L+ +M + + P++ T + V++ CA+ G + +A+
Sbjct: 313 DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIH 372
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+A G +P ++D+ + G + +A ++ +M R N W S++++ H
Sbjct: 373 TYADKNGFGRTLPI---NNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMH 428
Query: 416 GHVELA---EHAVKELINLEP 433
G + A H +KE N+EP
Sbjct: 429 GDADSAIALFHRMKEQ-NIEP 448
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 181/486 (37%), Positives = 282/486 (58%), Gaps = 10/486 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E I+ L T L + H +R L QS+ + V +C +A ++F Q+
Sbjct: 9 LEDAIIARLRTCATFRDLLRAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQI 68
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP--------DEYTFAPLLKACLG 112
P++ L N+MIKAY+ N + V+++ + P D +T+ LLKAC
Sbjct: 69 PAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGA 128
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ R+G+ VH + RSG E ++ ++E+YT CG + K FD M +DV+ N +
Sbjct: 129 LAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTL 188
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + G + + LF M +++VVSW ++S G + A+ +F M+ + FE D+
Sbjct: 189 ISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDD 248
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
++VAVLP CA+LGA+++G+WI++Y G+ KV + NAL++ Y KCG ++ A +F
Sbjct: 249 VSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVY-ICNALMEMYAKCGCIEEALQLFH 307
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVE 351
+ K+V+SW+ I GLA +GR V L+E M +G V PN TFVG+L+ C+HAGLV+
Sbjct: 308 GMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVD 367
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ M + + P +EHYGC+VD+LGRSG ++ A D IR M + P+ IWGSLLS+
Sbjct: 368 EGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSA 427
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR+HG VE A A + L+ LEP + GN V+L+N+Y GRW + + R +R + +K+P
Sbjct: 428 CRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTP 487
Query: 472 GQSLIE 477
G S+IE
Sbjct: 488 GCSMIE 493
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/454 (38%), Positives = 269/454 (59%), Gaps = 1/454 (0%)
Query: 24 HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEE 83
H ++H + + F+ + + A K+F+ V+ +N M+ Y+ ++
Sbjct: 132 HAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKK 191
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
LF ++ G+ P+ T +L AC + DL G+ ++ I ER + +++
Sbjct: 192 SKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLID 251
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
++ +CG+MD+ VFD M +RDVI ++ GF G +D F ++ ER VSW M
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
I + R EAL LF EM+ + DE T+V++L CA LGA+++G+W+ +Y + + +
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSI 371
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+ VGNAL+D Y KCG + A+ VFKE+ K+ +W AMI GLA NG GE + ++
Sbjct: 372 -KNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFS 430
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
MI ++P++ T++GVL C HAG+VEK + F SMT H I PN+ HYGCMVD+LGR+
Sbjct: 431 NMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRA 490
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLS 443
G + EA+++I +M ++PN+ +WGSLL +CR H +V+LAE A K+++ LEP N YVLL
Sbjct: 491 GRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLC 550
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NIYA RW++ +R M E +KK+PG SL+E
Sbjct: 551 NIYAACKRWENLRQVRKLMMERGIKKTPGCSLME 584
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 192/422 (45%), Gaps = 13/422 (3%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK--YATKIFNQMRNP 63
+ LL + L QIH+H ++ L L ++ C K YA ++F+ + P
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP 70
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++ ++N+MIK YS + V ++ L+ I PD +TF LLK L+ G+ +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
++ GF+ ++ + +++ C +D KVFD +V+ N+M+ G+ +
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 184 KGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
K LF EM +R V V+ LM+S+ K ++ + E + ++
Sbjct: 191 KSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLI 250
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+ A G +D Q + ++ R V+S ++V + G +D AR F +IP ++
Sbjct: 251 DMFAACGEMDEAQSVFDNMKN----RDVIS-WTSIVTGFANIGQIDLARKYFDQIPERDY 305
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSW AMI G R + L+ +M V P++ T V +LT CAH G +E E +
Sbjct: 306 VSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKT 364
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+SI + ++D+ + G V +A + + M + W +++ +GH E
Sbjct: 365 YIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGE 423
Query: 420 LA 421
A
Sbjct: 424 EA 425
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/425 (41%), Positives = 263/425 (61%), Gaps = 4/425 (0%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEP-VKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+ + P++ L+N +I+AYS + + L++ ++ G P+++TF L AC +
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLS 61
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+GQ +H I+SGFE ++++Y G ++ K+FDEM R V N M+
Sbjct: 62 SSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMA 121
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEA 233
G + GD+D L LF M R+VV W MIS + + +AL LF M +++ +
Sbjct: 122 GLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAV 181
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T+V++LP CA L A++IGQ + +YA +G ++ + NA+++ Y KCG +D A VF E
Sbjct: 182 TLVSILPACANLXALEIGQRVEAYARKNGFFKNXYA-SNAVLEMYVKCGKIDAAWRVFNE 240
Query: 294 IPR-KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
I +N+ SWN+M+ GLA +G +ELY+QM+ +G SP+ TFVG+L C G+V+K
Sbjct: 241 IGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKK 300
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R +F S T I+P LEHYGCMVD+LGR+G +REAY++I+SMS++P++ IWG+LL +C
Sbjct: 301 GRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGAC 360
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
HG+VELAE A + L LEPWN GNYV+LSNIYA G+WD LR M+ + + KS G
Sbjct: 361 SFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAG 420
Query: 473 QSLIE 477
S IE
Sbjct: 421 HSFIE 425
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 284/478 (59%), Gaps = 5/478 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
++++ LL+ + HL Q HA L L NL+L+ F+ +L YA +F + +
Sbjct: 12 KQVIWLLNHCSNLKHLHQTHAFMLCRALDHDNLLLSLFIQSSSSLGFSLYAYSLFTSLTH 71
Query: 63 P-SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P ++ L+N++I+A SL+ + LF +++ + PD Y+F LKA + + + G
Sbjct: 72 PPNIFLYNTIIRALSLSPQPSLSIFLFNRIQSARLRPDSYSFPFALKAVIRLSATKTGLQ 131
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD--EMSHRDVIVRNLMIHGFCKK 179
H + IR G + + ++ +Y+S + D K+FD ++ R+V + N M+ + K
Sbjct: 132 FHSQAIRFGLHSHLHVLVSLIRMYSS-SHISDARKLFDGIPLTARNVALWNAMLTSYAKI 190
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
D+ +LF M +R+++SW +IS R +A+ +F M+ Q DE T++AVL
Sbjct: 191 CDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVL 250
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+LGA+++G+WI +Y + GL+R V + NAL+D Y K G + A +F+ + K +
Sbjct: 251 SACAQLGALELGEWIRNYIDIHGLHRNV-PLHNALIDMYAKSGNIKRALLIFESMKHKTI 309
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V+W MI+GLA +G G +E++ +M V PN+ TF+ VL+ C+H GLV+ AR F +
Sbjct: 310 VTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTN 369
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M ++I P +EHYGCM+D+LGR+G ++EA L++ M PNAAIWGSLL++ THG
Sbjct: 370 MRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAM 429
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E +K LI LEP NSGNY LLSNIYA GRW + +R MR+ VKK PG S IE
Sbjct: 430 LGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIE 487
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 279/475 (58%), Gaps = 14/475 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+L +IHA + Q N IL H +S+ + + A K+F + PS ++N +IK ++
Sbjct: 42 NLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHT 101
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ S++ ++LF + G+ + +T++ LL AC+ R G+ +HG ++ +G+
Sbjct: 102 RSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLY 161
Query: 137 IRIGVVELYTSCGQMDD-----GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+R ++ LY + G D +FDEM +V+ N ++ G+ ++GD D +F E
Sbjct: 162 VRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDE 221
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M ER+V +W +M++ ++G+ AL LF +MR ELD+ +VA L CA LG + +G
Sbjct: 222 MPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLG 281
Query: 252 QWIHSYAESSGLYRKV---VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+WIH Y E + R + VS+ NAL+ Y CG++D A VF+EIP++N VSW+++I+G
Sbjct: 282 KWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITG 341
Query: 309 LAFNGRGELGVELYEQMIAKG---VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
A G G + +++ M+ G V P++ TF+G LT C+HAGL+ LF SM
Sbjct: 342 FAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFG 401
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
++P +EHYGCMVD+L R+G + EA LI SM ++PN A+WG+LLS CR H + E+ H
Sbjct: 402 VIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVA 461
Query: 426 KEL-INLEPWN--SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L + P N +G ++LL+N+YA GRW D T+R M + VKK G+S IE
Sbjct: 462 KHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIE 516
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 287/543 (52%), Gaps = 69/543 (12%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+K L LH + Q+HA L+ LH ++ +S ++ AT FNQ+
Sbjct: 20 LEQK-LSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQV 78
Query: 61 RNPSVLLFNSMIKAYSLNG-PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ P+V L+N+MI+A+S N PS+ FA+ ++ G + D +TF LLK C G L V
Sbjct: 79 QYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRD-GHYADNFTFPFLLKVCTGNVWLPVI 137
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQ----------------------------- 150
+ VH +I + GF + +++ Y+ CG
Sbjct: 138 ESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGL 197
Query: 151 -----MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM-- 203
++ KVFDEM +D I N M+ G+ K G +D LF EM ER+VVSW+ M
Sbjct: 198 AKGGLYEEARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVL 257
Query: 204 -----------------------------ISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
+S + G EA+ LF +M +LD T
Sbjct: 258 GYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGT 317
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
V+++L CA G + +G+ IH+ +++ ++ + NALVD Y KCG L+ A +VF +I
Sbjct: 318 VMSILAACAESGLLGLGEKIHASIKNNN-FKCTTEISNALVDMYAKCGRLNIAYDVFNDI 376
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
K+VVSWNAM+ GLA +G G +EL+++M +G SPNK T +GVL C HAGL++
Sbjct: 377 KNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGI 436
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F++M +++VP +EHYGCMVD+LGR G + EA LIR+M + PNA IWG+LL +CR
Sbjct: 437 RYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRM 496
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H VELA + L+ LEP +SGN+ +LSNIYA G W+ R+ MR KK G S
Sbjct: 497 HNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGAS 556
Query: 475 LIE 477
IE
Sbjct: 557 SIE 559
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 295/512 (57%), Gaps = 36/512 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS---VCGTLNEIKYATKIF 57
I +K++ LL + QIHA ++ L +N +LA + C + N++ YA +F
Sbjct: 2 IGKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVF 61
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLKACLGVGDL 116
+++ +P ++N+MI+AY + +E + LF +++ P D Y+ + +++AC + D
Sbjct: 62 DEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDP 121
Query: 117 RVGQCVHGEIIRSG--------------FERFGSIRIG-----------------VVELY 145
GQ +H ++++ G + +FG I I ++ Y
Sbjct: 122 GNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEY 181
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
G+++ +FD M RD++ N MIHG GDV LF ER ++SW+ MI+
Sbjct: 182 VRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIA 241
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+ K+ + +EALRLFHEM+ D+ T+V+VL C +GA+ +G+ IH E + +
Sbjct: 242 AYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEI 301
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+ +G +LVD Y KCG +D + VF + ++V +W+AMI GLA +G GEL ++ + +M
Sbjct: 302 DL-KLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKM 360
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
I++ + PN TF+GVL+ C+H GLV++ F SM+ ++ + P +EHYGC+VD+LGR+G
Sbjct: 361 ISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGR 420
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
++EA +LI+SM P+A +W +LL +CR + +VE+AE A L+ LEP GNYVLLSNI
Sbjct: 421 LQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNI 480
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y++ WD +R M+ N++K PG S IE
Sbjct: 481 YSQAKEWDKVVNVRRMMKNINIQKVPGSSSIE 512
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 284/487 (58%), Gaps = 11/487 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L T L + H +R L QS+ + V VC +A ++F +
Sbjct: 9 LEDAAIARLRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHV 68
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP---------DEYTFAPLLKACL 111
P++ L N+MIKAY+ N + V+++ + P D +T+ LLKAC
Sbjct: 69 PAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACG 128
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
G+ ++G+ VH + RSG E ++ ++E+YT CG + KVFD M +D + N
Sbjct: 129 GLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNT 188
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I + G + K LF M +++VVSW ++S G + A+ +F +M+ + FE D
Sbjct: 189 LISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPD 248
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ ++VAVLP CA+LGA+++G+WI++Y G+ K+ + NAL++ Y KCG ++ A +F
Sbjct: 249 DVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIY-ICNALMEMYAKCGCIEEALQLF 307
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLV 350
+ K+V+SW+ I GLA +GR V+L+E M +G V PN TFVG+L+ C+HAGL+
Sbjct: 308 HGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLL 367
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
++ F M + + P++EHYGC+VD+LGRSG ++ A D I M I P+ IWGSLLS
Sbjct: 368 DEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLS 427
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+CR+H V+ A A + L+ LEP + GN V+L+N+YA GRW + + R +R + +K+
Sbjct: 428 ACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKT 487
Query: 471 PGQSLIE 477
PG S+IE
Sbjct: 488 PGCSMIE 494
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 263/441 (59%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + CG + E A +F++M + V+ ++ MI Y +G + + LF +KN +
Sbjct: 163 LVRMYAACGRIAE---ARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNV 219
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE + +L AC G+L G+ +H I+ + ++ +V +Y SCG MD +
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F++M+ ++++ M+ G+ K G ++ +F +M ++ +V W+ MIS +S EA
Sbjct: 280 LFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEA 339
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF+EM+ + D+ T+++V+ CA LGA+D +WIH + + +G + + + NAL++
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNG-FGGALPINNALIE 398
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG L+ AR +F ++PRKNV+SW MIS A +G + + QM + + PN T
Sbjct: 399 MYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGIT 458
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FVGVL C+HAGLVE+ R++F SM H+I P HYGCMVD+ GR+ +REA +L+ +M
Sbjct: 459 FVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM 518
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ PN IWGSL+++CR HG +EL E A K L+ L+P + G +V LSNIYA+ RW+D
Sbjct: 519 PLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVG 578
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M+ + K G S E
Sbjct: 579 QVRKLMKHKGISKERGCSRFE 599
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 213/415 (51%), Gaps = 16/415 (3%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFNQMRNPSVLL 67
L + THL Q+HA LR KL +S +L V S C + + YA +FN + P L
Sbjct: 30 LSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHL 89
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
N ++ S + E+ + ++ ++ G+ D ++F PLLKA V L G +HG
Sbjct: 90 CNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAA 149
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ GF+ ++ G+V +Y +CG++ + +FD+M HRDV+ ++MI G+C+ G + L
Sbjct: 150 KLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALL 209
Query: 188 LFREMRERSVVSWNLMISSL----GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF EM+ +V +M+S++ G++G S + + + +D A++ + A
Sbjct: 210 LFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYA 269
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
G++D+ + + K + A+V Y K G ++ AR+VF ++ +K++V W+
Sbjct: 270 SCGSMDLALNLF-----EKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWS 324
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--ELFASMT 361
AMISG A + + + L+ +M + G+ P++ T + V+T CAH G +++A+ LF
Sbjct: 325 AMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKN 384
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
G +P ++++ + G + A + M R N W ++S+ HG
Sbjct: 385 GFGGALPI---NNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHG 435
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 176/465 (37%), Positives = 272/465 (58%), Gaps = 4/465 (0%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+HL Q L L Q +++LA F+ +L YA +F PS+ +N++I A
Sbjct: 44 SHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFFYNNVIWAL 103
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S + P+ + LF ++ LG+ PD Y+F +LKA + + + VG+ +H + I SG +
Sbjct: 104 SSSNPTRA-ISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHP 162
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM--R 193
S+ +V++Y+SC + K+FD + + + N M+ G+ K G++ LF M +
Sbjct: 163 SVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLFECMPEK 222
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+R VVSW +IS ++ +EA+ LF M Q + DE ++AVL CA LGA+ +G+W
Sbjct: 223 DRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEW 282
Query: 254 IHSYAES-SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
IH+Y E + RK V + N+L+D Y K G + AR +F+ + K +++W +ISGLA +
Sbjct: 283 IHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLALH 342
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G+ ++++ M V PN+ T + VL+ C+H GLVE R +F SM + I P +EH
Sbjct: 343 GFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEH 402
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCM+D+LGR+G ++EA +L+R M NAA+WGSLLS+ +G LA A++ L LE
Sbjct: 403 YGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVLE 462
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P N GNY LLSN YA G W +A +R MR+ +K PG S +E
Sbjct: 463 PHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVE 507
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 280/467 (59%), Gaps = 39/467 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +IHAH ++ L QS+ ++ V VC E +YA +F + +P+ L+N+MI+AY
Sbjct: 75 LKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLYNAMIRAYKH 134
Query: 78 NGPSEEPVKLF-ALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
N + ++ +L N I+PD++TF ++K+C G+ +G+ VHG + + G +
Sbjct: 135 NKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQK 194
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ +VE+Y C +DD +V F EM
Sbjct: 195 SNTVVENSLVEMYVKCDSLDDAHRV-------------------------------FEEM 223
Query: 193 RER--SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
ER ++ SW ++S + G ++AL F M+ E DE ++V+VLP CA+LGA+++
Sbjct: 224 TERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALEL 283
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIH YA+ +G R + V NAL++ Y KCG +D R +F ++ ++V+SW+ MI GLA
Sbjct: 284 GKWIHIYADKAGFLRNIC-VCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLA 342
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+GR +EL+++M + P+ TFVG+LT CAHAGL+ + F SM ++I P +
Sbjct: 343 NHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGV 402
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGC+V++LG SG + +A +L++ M +P++ IWGSLLSSCR+HG++++A A++ L+
Sbjct: 403 EHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLE 462
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP ++GNYVLLSN+YA+ G+WD +R MR ++KK+PG S IE
Sbjct: 463 LEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIE 509
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 263/458 (57%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ + + + + +I A +F+ M S++ +NSM+ Y+ NG
Sbjct: 142 QVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNG 201
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E VKLF + L I D+ T +L AC + +L +G+ + I+ G R ++
Sbjct: 202 LWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTT 261
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CGQ+D K LF EM +R VV+
Sbjct: 262 SLIDMYAKCGQVDTARK-------------------------------LFDEMDKRDVVA 290
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ MIS ++ R EAL LFHEM+ +E T+V+VL CA LGA + G+W+H Y +
Sbjct: 291 WSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIK 350
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + V++G L+DFY KCG +D + VFKE+ KNV +W A+I GLA NG G++ +
Sbjct: 351 KKKM-KLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMAL 409
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
E + M+ V PN TF+GVL+ C+HA LV++ R LF SM I P +EHYGCMVD+
Sbjct: 410 EFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDI 469
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + EAY I +M PNA +W +LL+SCR H ++E+AE +++ + LEP +SG+Y
Sbjct: 470 LGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDY 529
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LLSN YA GR +DA +R ++E +KK PG SLIE
Sbjct: 530 ILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIE 567
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 279/475 (58%), Gaps = 14/475 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+L + HA + Q N IL H +S+ + + A K+F + PS ++N +IK ++
Sbjct: 42 NLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHT 101
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ S++ ++LF + G+ + +T++ LL AC+ R G+ +HG ++ +G+
Sbjct: 102 RSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLY 161
Query: 137 IRIGVVELYTSCGQMDD-----GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+R ++ LY + G D + +FDEM +V+ N ++ G+ ++GD D +F E
Sbjct: 162 VRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVFDE 221
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M ER+V +W +M++ ++G+ AL LF +MR ELD+ +VA L CA LG + +G
Sbjct: 222 MPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLG 281
Query: 252 QWIHSYAESSGLYRKV---VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+WIH Y E + R + VS+ NAL+ Y CG +D A +F+EIP++N VSW+++I+G
Sbjct: 282 KWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITG 341
Query: 309 LAFNGRGELGVELYEQMIAKG---VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
A G G + +++ M+ G V P++ TF+G LT C+HAGL+ LF SM
Sbjct: 342 FAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFG 401
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
++P +EHYGCMVD+L R+G + EA LI SM ++PN A+WG+LLS CR H + E+ H
Sbjct: 402 VIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVA 461
Query: 426 KEL-INLEPWN--SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L ++P N +G ++LL+N+YA GRW D T+R M + VKK G+S IE
Sbjct: 462 KHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIE 516
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 265/438 (60%), Gaps = 1/438 (0%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
F+ + + I YA +F++M + V+ +N+MI+ Y G +E KLF +K+ + PD
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E ++ AC G++R + ++ +I + + +V +Y G MD + F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+MS R++ V M+ G+ K G +D +F + ++ +V W MIS+ +S EALR+
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F EM + D ++ +V+ CA LG +D +W+HS +GL ++ S+ NAL++ Y
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL-SINNALINMYA 390
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG LD R+VF+++PR+NVVSW++MI+ L+ +G + L+ +M + V PN+ TFVG
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL C+H+GLVE+ +++FASMT ++I P LEHYGCMVD+ GR+ +REA ++I SM +
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
N IWGSL+S+CR HG +EL + A K ++ LEP + G VL+SNIYA RW+D +R
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 460 MWMRENNVKKSPGQSLIE 477
M E NV K G S I+
Sbjct: 571 RVMEEKNVFKEKGLSRID 588
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 215/438 (49%), Gaps = 18/438 (4%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP- 63
IL L + H+ Q+HAH LR ++ +SV + + YA +F+ + +P
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++FN ++ S + + + ++++G D+++F P+LKA V L G +H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G + + G +++Y SCG+++ VFDEMSHRDV+ N MI +C+ G VD
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 184 KGLYLFREMRERSVVSWNL----MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ LF EM++ +V+ + ++S+ G++G ++ + + +D + A++
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+ A G +D+ + L+ V A+V Y KCG LD A+ +F + +K++
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLF-----VSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V W MIS + + + ++E+M G+ P+ + V++ CA+ G+++KA+ + +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 360 M--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GL S L ++++ + G + D+ M R N W S++++ HG
Sbjct: 370 IHVNGLES---ELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Query: 418 VE--LAEHAVKELINLEP 433
L+ A + N+EP
Sbjct: 426 ASDALSLFARMKQENVEP 443
>gi|413920230|gb|AFW60162.1| hypothetical protein ZEAMMB73_962137 [Zea mays]
Length = 516
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/417 (43%), Positives = 254/417 (60%), Gaps = 16/417 (3%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+ +KA S + P ++ +L + L+ PD TF PL+ L + +H ++R
Sbjct: 103 NAAVKALSASSPPDDAFRLLSTLRQFHA-PDRLTFLPLIGC---ASSLPLLYALHSLLLR 158
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD--VIVRNLMIHGFCKKGDVDKGL 186
GF I + +++ Y + +FD+M ++ + N +I + D+
Sbjct: 159 LGFLSHHVISLALLKPYP----LPQARVLFDDMPQKNKCTVAYNTLITACLRVRDIRAAR 214
Query: 187 YLFREMR-----ERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLP 240
+LF EM+ RSVVSWNLMI+ + GRD A+ F M R+ D+ T+VAVLP
Sbjct: 215 HLFDEMQWHRRSRRSVVSWNLMIAGCARCGRDDMAVSCFERMIREGEVAPDDGTLVAVLP 274
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C R G V G+W H YA SGL V V NAL+D YCK G +++AR VF ++VV
Sbjct: 275 ACGRTGNVRAGRWAHEYARKSGLLDGTVHVANALMDMYCKSGDVNSAREVFMTTRPRSVV 334
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN +I+G + NGRG G++L+++M +G+ PN TF+ VL CCAHAG V+ RE+F SM
Sbjct: 335 SWNTLIAGFSLNGRGVEGIDLFQEMRRQGMEPNAVTFLAVLGCCAHAGAVDIGREIFRSM 394
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
H +EHYGCMVD+ GRSG + EA+ LI+ M ++PNAAIWG+LLS+CR H + L
Sbjct: 395 LSEHGTEAAIEHYGCMVDLFGRSGLLEEAHVLIQGMPMKPNAAIWGALLSACRAHAGLGL 454
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE A+KELINLEPWNSGNYVLL+N+Y E RWD+A +R MR +V K+PGQS +E
Sbjct: 455 AEVALKELINLEPWNSGNYVLLANLYVETERWDEAGEVRRLMRRMSVNKAPGQSFME 511
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/443 (37%), Positives = 261/443 (58%), Gaps = 1/443 (0%)
Query: 35 LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
I +++ + I A +F++M +P + +N +I Y NG ++ ++LF +++
Sbjct: 157 FIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSS 216
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
+ PD +L AC G+L G+ +H + +G+ ++ ++ +Y +CG MD
Sbjct: 217 DMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLA 276
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
K++D +S + +IV M+ G+ K G V ++F +M ER +V W+ MIS +S +
Sbjct: 277 RKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQ 336
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EAL+LF EM + D+ T+++V+ C+ +GA+ WIH+Y + SG R +SV NAL
Sbjct: 337 EALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGR-ALSVNNAL 395
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
+D Y KCG L AR VF+ +PRKNV+SW++MI+ A +G + ++L+ +M + PN
Sbjct: 396 IDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG 455
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
TF+GVL C HAGLVE+ +LF+SM H I P EHYGCMVD+ R+ +R+A +LI
Sbjct: 456 VTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIE 515
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
+M PN IWGSL+S+C+ HG EL E A K L+ LEP + G V+LSNIYA+ RW+D
Sbjct: 516 TMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWND 575
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
+R M + K S IE
Sbjct: 576 VGLIRKSMSYKGISKEKASSRIE 598
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 215/432 (49%), Gaps = 24/432 (5%)
Query: 17 HLTQIHAHFLRHKL--HQSNLILAHFVSVCGTLNEIKYATK----IFNQMRNPSVLLFNS 70
HL QIHA L +N +L+ TL+ + +F+Q+ NP N
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQ 90
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+++ S + E+ + L+ L+ + + D ++F LLKA V G +HG +
Sbjct: 91 LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKL 150
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
GF I+ G++ +Y SC ++ D +FD+M H D + N++I G+C+ G D L LF
Sbjct: 151 GFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 190 REMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+MR + V ++S+ G +G S + ++D + +D A++ + A
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANC 270
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+ + I+ GL K + V A++ Y K G++ AR +F ++ +++V W+AM
Sbjct: 271 GAMDLARKIY-----DGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAM 325
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--ELFASMTGL 363
ISG A + + + ++L+++M+ K P++ T + V++ C+H G + +A + +G
Sbjct: 326 ISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGF 385
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
L ++D+ + G + +A ++ +M R N W S++++ HG+ + A
Sbjct: 386 GRA---LSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAMHGNADSAIK 441
Query: 424 AVKEL--INLEP 433
+ + +N+EP
Sbjct: 442 LFRRMKEVNIEP 453
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/499 (37%), Positives = 286/499 (57%), Gaps = 40/499 (8%)
Query: 18 LTQIHAHFLRHKLHQSN--LILAHFVSVCGTLNEI--KYATKIFNQMRNPSVLLFNSMIK 73
L QIHA ++ I ++C I +YA + Q+R P++ L+N++I+
Sbjct: 53 LKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 112
Query: 74 AYSL-NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ N S E + ++ + + GI PD YT +LKAC +R G+ VHG+ I+ G
Sbjct: 113 GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLA 172
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG------- 185
+ ++ +Y C + KVFD RD++ MI G+ K G +G
Sbjct: 173 SDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIR 232
Query: 186 ----------------LYL-----------FREMRERSVVSWNLMISSLGKSGRDSEALR 218
+YL F+EM ++VVSWN MIS L + G+ E+L
Sbjct: 233 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLY 292
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
+F +M+ + D+ T+VAVL CA LG +++G+W+H+Y + + + R +GNALVD Y
Sbjct: 293 MFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQI-RADGFIGNALVDMY 351
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG +D A VF+ + RK+V S+ AMI GLA +G+G ++L+ +M G+ P++ TFV
Sbjct: 352 AKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFV 411
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
GVLT C+H GLVE+ R+ F M+ ++++ P LEHYGCMVD+LGR+G + EA + IR+M I
Sbjct: 412 GVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPI 471
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+A + G+LL +C+ HG VEL E +K++ +EP G YVL+SNIY+ RW DA L
Sbjct: 472 EPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKL 531
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M+E N++K+PG S IE
Sbjct: 532 RKTMKERNLEKTPGCSSIE 550
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 279/465 (60%), Gaps = 7/465 (1%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ+HA + + + + + + + A ++F+ M +++ +NS+I Y N
Sbjct: 167 TQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQN 226
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSI 137
GP+ E +++F + + G+ PDE T A ++ AC + L+ G +H ++++ F +
Sbjct: 227 GPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y C ++++ +VFD MS R+V+ M+ G+ + V ++F +M +R+V
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN +I+ ++G + EALRLF ++ ++ T +L CA L + +G+ H++
Sbjct: 347 VSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTH 406
Query: 258 AESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
G + + VGN+L+D Y KCG ++ VF+++ ++ VSWNA+I G A N
Sbjct: 407 VLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN 466
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G ++++ +M+ G P+ T +GVL C+HAGLVE+ R F SM H ++P +H
Sbjct: 467 GYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDH 525
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y CMVD+LGR+GC+ EA +LI +M + P+A +WGSLL++C+ HG++E+ +HA ++L+ ++
Sbjct: 526 YTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 585
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
PWNSG YVLLSN+YAE GRW D +R MR+ V K PG S IE
Sbjct: 586 PWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIE 630
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 178/366 (48%), Gaps = 11/366 (3%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
P+ FA LL +CL R + VH I+ + F I+ ++++Y C +DD K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FD M R+ N +I K G +D+ LF M E SWN M+S + R E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F +M + F L+E + + L CA L +++G +H+ S Y V +G+AL+D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV-SKSRYSTDVYMGSALIDM 191
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG + A VF + +N+V+WN++I+ NG +E++ +M+ G+ P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
V++ CA +++ ++ A + + +L +VD+ + V EA + MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDA 455
IR N S++S V+ A ++ N+ WN+ L Y + G ++
Sbjct: 312 IR-NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA-----LIAGYTQNG--ENE 363
Query: 456 ETLRMW 461
E LR++
Sbjct: 364 EALRLF 369
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 65/333 (19%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A ++F M P +NSM+ ++ + EE ++ F + +EY+F
Sbjct: 95 GFLDE---AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFG 151
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L AC G+ DL +G VH + +S + + ++++Y+ CG + +VF M
Sbjct: 152 SALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM--- 208
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
I RNL V+WN +I+ ++G SEAL +F M
Sbjct: 209 --IERNL--------------------------VTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D E DE T+ +V+ CA L A+ G IH+ + +R + +GNALVD Y KC +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 285 DTARNV-------------------------------FKEIPRKNVVSWNAMISGLAFNG 313
+ AR V F ++ ++NVVSWNA+I+G NG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
E + L+ + + + P TF +L+ CA+
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACAN 393
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 281/495 (56%), Gaps = 20/495 (4%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQ 59
E L L + HL QIH+ ++ + + +I +S C + ++ YA ++F+
Sbjct: 14 ENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDT 73
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ PSV +N M K YS + V L+ + + PD YT+ L K L++G
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG---- 175
+ +H +++ G + ++ +Y+ CG +D +FD DV+ N MI G
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193
Query: 176 -------------FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
F G VD F +M ER VSW MI + EAL LF E
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFRE 253
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M+ + DE T+V+VL CA+LGA+++G+WI +Y + + + + VGNAL+D Y KCG
Sbjct: 254 MQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKV-KNDTFVGNALIDMYFKCG 312
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
++ A ++F +P+++ +W AM+ GLA NG GE + ++ QM+ V+P++ T+VGVL+
Sbjct: 313 NVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLS 372
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C H G+V++ ++ FASMT H I PN+ HYGCMVD+LG++G ++EA+++I++M ++PN+
Sbjct: 373 ACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNS 432
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+WG+LL +CR H E+AE A+++++ LEP N YVL NIYA +WD LR M
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVM 492
Query: 463 RENNVKKSPGQSLIE 477
+ +KK+PG SLIE
Sbjct: 493 MDRGIKKTPGCSLIE 507
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 270/445 (60%), Gaps = 1/445 (0%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
S +++ V + +I A +IF++ N +++++N+++ Y + + + + + +
Sbjct: 265 STIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEML 324
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G PD+ T + AC +GDL VG+ H ++R+G E + +I ++++Y CG+ +
Sbjct: 325 QKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKRE 384
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
KVF+ M ++ V+ N +I G + GD++ +F EM ER +VSWN MI +L +
Sbjct: 385 AACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSM 444
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
EA+ LF EM++Q D T+V + C LGA+D+ +W+ +Y E + ++ + +G
Sbjct: 445 FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDL-QLGT 503
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
ALVD + +CG +A +VFK + +++V +W A I +A G E +EL+ +M+ + V P
Sbjct: 504 ALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKP 563
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
+ FV +LT C+H G V++ R+LF SM H I P++ HYGCMVD+LGR+G + EA DL
Sbjct: 564 DDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL 623
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
I+SM I PN +WGSLL++CR H +VELA +A ++L L P G +VLLSNIYA G+W
Sbjct: 624 IQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKW 683
Query: 453 DDAETLRMWMRENNVKKSPGQSLIE 477
D +R+ M+E V+K PG S IE
Sbjct: 684 TDVARVRLQMKEKGVQKVPGSSSIE 708
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 211/446 (47%), Gaps = 57/446 (12%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKL--HQ--SNL--ILAHFVSVCGTLNEIKYATKIF--N 58
+LL T L Q+H ++ L H+ SNL ++A V + GTL + YA F +
Sbjct: 30 KLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQI-GTLESLDYARNAFGDD 88
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
S+ ++N +I+ Y+ G ++ + L+ + +GI PD+YTF LL AC + L
Sbjct: 89 DGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSE 148
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G VHG +++ G E + ++ Y CG++D G K+FD M R+V
Sbjct: 149 GVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNV------------ 196
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--SEALRLFHEMRDQAFELDEATVV 236
VSW +I+ G SGRD EA+ LF +M + E + T+V
Sbjct: 197 -------------------VSWTSLIN--GYSGRDLSKEAVSLFFQMGEAGVEPNPVTMV 235
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
V+ CA+L +++G+ + SY G+ + V NALVD Y KCG + AR +F E
Sbjct: 236 CVISACAKLKDLELGKKVCSYISELGMELSTIMV-NALVDMYMKCGDICAARQIFDECAN 294
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG--LVEKAR 354
KN+V +N ++S + + + ++M+ KG P+K T + + CA G V K+
Sbjct: 295 KNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSS 354
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI--WGSLLSSC 412
+ GL N+ + ++D+ + G A + M PN + W SL++
Sbjct: 355 HAYVLRNGLEGW-DNISN--AIIDMYMKCGKREAACKVFEHM---PNKTVVTWNSLIAGL 408
Query: 413 RTHGHVELAEHAVKELI--NLEPWNS 436
G +ELA E++ +L WN+
Sbjct: 409 VRDGDMELAWRIFDEMLERDLVSWNT 434
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/433 (38%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
+L + Y+ +F + +NPSV + ++I ++L G E+ + +A + G+ P+ +TF+
Sbjct: 20 ASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFS 79
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+LK C + G+ +H + ++ GF+ +R G++++Y G + ++FD M +
Sbjct: 80 SILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEK 135
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
++ M+ + K G++D LF M ER V WN+MI ++G +EAL LF M
Sbjct: 136 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 195
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ +E TV++VL C +LGA++ G+W+HSY E++G+ V VG ALVD Y KCG L
Sbjct: 196 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV-HVGTALVDMYSKCGSL 254
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ AR VF +I K+VV+WN+MI G A G + ++L++ M G+ P TF+G+L+ C
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H+G V + ++F M + I P +EHYGCMV++LGR+G V +AY+L+++M+I P+ +
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL +CR HG + L E V+ L++ NSG Y+LLSNIYA G WD LR M++
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434
Query: 465 NNVKKSPGQSLIE 477
+ VKK PG S IE
Sbjct: 435 SGVKKEPGCSSIE 447
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 9/293 (3%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y S G++D + +F + V +IHG +G ++ L + +M + V
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
SS+ K L + F+ D +L + AR G V Q + L
Sbjct: 79 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSL- 137
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
VS+ A++ Y K G LD AR +F + ++ V WN MI G NG + L+ +
Sbjct: 138 ---VSL-TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M+ PN+ T + VL+ C G +E R + + + + I N+ +VD+ + G
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NGIQFNVHVGTALVDMYSKCG 252
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWN 435
+ +A + + + + W S++ G + A K + + L P N
Sbjct: 253 SLEDARLVFDKIDDK-DVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTN 304
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG+L + A +F+++ + V+ +NSMI Y++ G S+E ++LF + +G+
Sbjct: 244 LVDMYSKCGSLED---ARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGL 300
Query: 97 WPDEYTFAPLLKAC 110
P TF +L AC
Sbjct: 301 HPTNITFIGILSAC 314
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-----PSVLLFNSMIKA 74
Q+ R LH +N+ +S CG + IFN+M++ P + + M+
Sbjct: 290 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 349
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G E+ + L+KN+ I PD + LL AC G + +G+ + ++
Sbjct: 350 LGRAGHVEQA---YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 406
Query: 135 GSIRIGVVELYTSCGQMD 152
G+ I + +Y + G D
Sbjct: 407 GTY-ILLSNIYAAVGNWD 423
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 284/467 (60%), Gaps = 13/467 (2%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++H+H ++H + L H SV G LN A +F++ ++ +N+MIK Y+
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLN---LARTLFDESLVRDLVSYNTMIKGYA 188
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS--GFERF 134
E + LF ++N GI PDE+TF L C + + VG+ +H ++ ++ +
Sbjct: 189 EVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSN 248
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
++ +V++Y CG ++ +VF M + + + M+ G+ + G+++ LF M
Sbjct: 249 ILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMH 308
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
ER V+SW MIS ++G+ SEAL LF EM + DE T+VAVL CARLGA D+G+
Sbjct: 309 ERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKR 368
Query: 254 I-HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLA 310
+ H Y E+ G++ + + A++D Y KCG +D+A +F+ + + K +N+MI+GLA
Sbjct: 369 LYHQYIEN-GVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLA 427
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G GE + ++ ++I+ G+ P++ TFVGVL C H+GL+E+ ++LF SM + I P +
Sbjct: 428 QHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQM 487
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGCMVD+LGR GC+ EAYDL++ M N+ IW +LLS+CRTHG+V++ E A ++L+
Sbjct: 488 EHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLE 547
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+E + YVLLSNI A+ +W++A +R M ++ ++K PG S IE
Sbjct: 548 MEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 594
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 211/427 (49%), Gaps = 17/427 (3%)
Query: 20 QIHAHFLRHKLHQSNLILAH---FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIHA + + LH ++ F S+ G+ + + ++ +F+Q+ P++ ++N+MI+ YS
Sbjct: 27 QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYS 86
Query: 77 LNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ E + L+ + GI P + +TF LL +C + L G VH II+ GFE
Sbjct: 87 RSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDL 146
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+R ++ LY+ G ++ +FDE RD++ N MI G+ + + L LF EM+
Sbjct: 147 FVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS 206
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE----LDEATVV--AVLPICARLGAVD 249
++ +L + ++ Q ++ +D ++ A++ + A+ G ++
Sbjct: 207 GILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLIN 266
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
I + + S +S K + +++V Y +CG ++ AR +F + ++V+SW AMISG
Sbjct: 267 IAERVFSTMGTS----KSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGY 322
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+ G+ +EL+++M A G+ P++ T V VL+ CA G + + L+ N
Sbjct: 323 SQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQN 382
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA-IWGSLLSSCRTHGHVELAEHAVKEL 428
++D+ + G + A ++ R + ++ S+++ HG E A +EL
Sbjct: 383 TILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFREL 442
Query: 429 IN--LEP 433
I+ L+P
Sbjct: 443 ISTGLKP 449
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 276/488 (56%), Gaps = 44/488 (9%)
Query: 2 ERKILRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIF--- 57
E+ IL LL+ NT + LTQIHA L+ L + LIL F S LN I YAT
Sbjct: 17 EQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPP 76
Query: 58 ---NQMRNPS--VLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACL 111
PS LFN++I+AYS S+ LF + G+ P+++TF +LK C
Sbjct: 77 SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCA 136
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
G+G LR+G+CVHG +++ GFE DV V N
Sbjct: 137 GIGSLRLGKCVHGCVVKFGFEE-------------------------------DVHVLNT 165
Query: 172 MIHGFCKKGD--VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+IH +C G+ + +F + + V+W+ MI+ + G S A+ LF EM+
Sbjct: 166 LIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVC 225
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
DE T+V+VL CA LGA+++G+W+ SY E + K V + NAL+D + KCG +D A
Sbjct: 226 PDEITMVSVLSACADLGALELGKWVESYVEKKNI-PKSVELCNALIDMFAKCGNVDKAIK 284
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F+++ + +VSW ++I+GLA +GRG V L+++M+ G++P+ F+GVL+ C+H+GL
Sbjct: 285 LFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGL 344
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V+K R F SM SIVP +EHYGCMVD+L R G V+EA++ ++ M PN IW +++
Sbjct: 345 VDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTII 404
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
++C G ++L E KELI EP + NYVLLSNIYA+ +W+ +R M +KK
Sbjct: 405 TACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKK 464
Query: 470 SPGQSLIE 477
PG ++IE
Sbjct: 465 VPGSTMIE 472
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 263/425 (61%), Gaps = 3/425 (0%)
Query: 52 YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL 111
YA K+F+ +N L+N +I+AY ++ E + L+ LL G+ P +TF + A
Sbjct: 27 YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA 86
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
R + +H + RSGFE ++ Y G + +VFDEMS RDV V N
Sbjct: 87 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 146
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFEL 230
MI G+ ++GD+ + LF M ++V SW +IS ++G SEAL++F M +D++ +
Sbjct: 147 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 206
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ TVV+VLP CA LG ++IG+ + YA +G + + V NA ++ Y KCG++D A+ +
Sbjct: 207 NHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIY-VCNATIEMYSKCGMIDVAKRL 265
Query: 291 FKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
F+E+ ++N+ SWN+MI LA +G+ + + L+ QM+ +G P+ TFVG+L C H G+
Sbjct: 266 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 325
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V K +ELF SM +H I P LEHYGCM+D+LGR G ++EAYDLI++M ++P+A +WG+LL
Sbjct: 326 VVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 385
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+C HG+VE+AE A + L LEP N GN V++SNIYA +WD +R M++ + K
Sbjct: 386 GACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTK 445
Query: 470 SPGQS 474
+ G S
Sbjct: 446 AAGYS 450
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 193/514 (37%), Positives = 288/514 (56%), Gaps = 42/514 (8%)
Query: 2 ERKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIF 57
++ IL LL+ +++ + HL Q+HA LR Q + + V + + +A K+F
Sbjct: 28 QKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVF 87
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW---PDEYTFAPLLKACLGVG 114
+ NP+V +FN +IK N EP K + I P+++T+ L KAC
Sbjct: 88 EYVPNPNVFVFNIIIKGCLQN---NEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAE 144
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
G VH +I+ G IR +++Y S G+++ ++ E + DVI N MI
Sbjct: 145 AAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMID 204
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD--------- 225
G+ K G+V+ LF M +++V SWN+M+S + K G EA LF+EM++
Sbjct: 205 GYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAM 264
Query: 226 -----------QAFEL-----------DEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
+A E+ + + +VL CA LGA+D G+WIH+Y ++
Sbjct: 265 IDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSN 324
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
V +G ALVD Y KCG LD A +VF+++ +K V +WNAMI GL +GR E +EL+
Sbjct: 325 SFDAV-LGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFF 383
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+M + PN T +GVL+ CAH+G+V++ +F SM ++ I P +EHYGC+VD+LGR+
Sbjct: 384 KMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRA 443
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLS 443
G + EA +++ SM + P+AA+WG+LL +CR HG VEL E K L+ LEP NSG Y LLS
Sbjct: 444 GLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLS 503
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NIYA GRWDD +R M+E VK S G S+I+
Sbjct: 504 NIYARAGRWDDVANVRKLMKERGVKTSTGISMID 537
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/383 (42%), Positives = 242/383 (63%), Gaps = 1/383 (0%)
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
G+ P+++T + ++KAC + L G+ H II+ GFE ++ +V +Y CG ++D
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
VFD+MS R N MI G + D+ K L LF EM ER VVSW +I+ ++G
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
E+L +F++MR + D + +VL CA L A+++G+ H+Y SG +V VG+AL
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIV-VGSAL 183
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
VD Y K G ++ A VF ++P++N VSWN++I+G A +GRG V L+EQM+ G+ PN+
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
+FVGVL+ C+H GLV + R F MT + IVP++ HY CM+D+LGR+GC+ EA + I
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
M + P+ ++WG+LL +CR HG+ ELA+ + L+ +E +G YVLLSNIYA G+WDD
Sbjct: 304 GMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
A +R M++ V K PG S IE
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWIE 386
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 133/323 (41%), Gaps = 68/323 (21%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK----------------------- 73
L H + CG+L + A +F++M S +N+MI
Sbjct: 51 LVHMYARCGSLED---AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDV 107
Query: 74 --------AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
Y+ NG +E + +F ++ G+ D + +L AC + L +G+ H
Sbjct: 108 VSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAY 167
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+++SGF + +V++Y G M+D +VFD+M R+ + N +I G
Sbjct: 168 VVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITG---------- 217
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+ GR ++A+ LF +M + +E + V VL C+
Sbjct: 218 ---------------------CAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHT 256
Query: 246 GAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS-WN 303
G V+ G+ + + ++ G+ VS ++D + G LD A N +P + VS W
Sbjct: 257 GLVNEGRGYFNLMTQNYGIVPD-VSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWG 315
Query: 304 AMISGLAFNGRGELGVELYEQMI 326
A++ +G EL + E ++
Sbjct: 316 ALLGACRIHGNTELAKRIAEHLL 338
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 50/101 (49%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q HA+ ++ ++ + V + ++ A ++F++M + + +NS+I + +G
Sbjct: 163 QFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHG 222
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ V LF + GI P+E +F +L AC G + G+
Sbjct: 223 RGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGR 263
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 283/485 (58%), Gaps = 22/485 (4%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQMRNPSVLLFNSMI 72
T L Q+HA F++ Q L A + C + +I YA +F QM P+ +N+++
Sbjct: 31 TPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTIL 90
Query: 73 KAYSLNGP---SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
+ + E + LF A+L + + P+ +TF +LKAC LR G+ +HG I++
Sbjct: 91 RVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVK 150
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVF------------DEMSHR----DVIVRNLM 172
GF + +V +Y C M+D +F E+ R +V++ N+M
Sbjct: 151 FGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIM 210
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + GD+ LF EM +RSVVSWN+MIS ++G EA+ LF EM+ + +
Sbjct: 211 IDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNY 270
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V+VLP AR+GA+++G+WIH YA + + V +G+ALVD Y KCG +D A VF+
Sbjct: 271 VTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV-LGSALVDMYSKCGSIDEALQVFE 329
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P++N ++W+A+I A +GR E + + M GV+PN ++G+L+ C+HAGLVE+
Sbjct: 330 TLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEE 389
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R F+ M + + P +EHYGCMVD+LGR+G + EA +LIR+M I P+ IW +LL +C
Sbjct: 390 GRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGAC 449
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ H ++++ E + L+ L P +SG+YV LSN+YA G W+ +R+ M+ +++K PG
Sbjct: 450 KMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPG 509
Query: 473 QSLIE 477
S IE
Sbjct: 510 CSWIE 514
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 276/482 (57%), Gaps = 8/482 (1%)
Query: 1 IERKILRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK---YATKI 56
+E + +R++ T H Q+HAH R+ LHQS+ ++ + + TL I Y +
Sbjct: 9 LEWEAVRIIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLL 68
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
F+Q+ +P+ L++++I+AY+ NGP ++L+ + N + P +TF+ L + +
Sbjct: 69 FSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKNP 125
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+G +H GF + ++ +Y G +D KVFDEM HRDV+ +I +
Sbjct: 126 SLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAY 185
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ GD+D LF + + +V+W M++ ++ +AL+ F +MR+ DE T+V
Sbjct: 186 ARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLV 245
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYR-KVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ CA+LG WI AESS V VG+AL+D Y KCG ++ A NVFK +
Sbjct: 246 GAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMK 305
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
NV S+++MI G A +GR ++L+ +M+ G+ PN TFVG+ T C+HAG+VE+ ++
Sbjct: 306 EMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQ 365
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
LF +M + + P +HY CM D+LGR+G + +A L+++M + PN +WG+LL + H
Sbjct: 366 LFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIH 425
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+ ++AE A + L LEP N GNY+LLS YA +WDD +R MRE ++K+PG S
Sbjct: 426 GNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSW 485
Query: 476 IE 477
+E
Sbjct: 486 VE 487
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 273/456 (59%), Gaps = 2/456 (0%)
Query: 23 AHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
A + ++ Q N++ ++ + + G + ++ A K+FN+M ++ ++++I Y NG
Sbjct: 226 AKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 285
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
EE + +F + G+ DE +L AC + ++ G+ +HG +IR G E + +++ +
Sbjct: 286 EEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNAL 345
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ +Y+ G++ D K+F+ + D I N MI G K G V+K LF M E+ +VSW+
Sbjct: 346 IHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWS 405
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
+IS + SE L LFHEM+ DE +V+V+ C L A+D G+W+H+Y +
Sbjct: 406 AVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKN 465
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
GL V+ +G L+D Y KCG ++ A VF + K V SWNA+I GLA NG E +++
Sbjct: 466 GLKVNVI-LGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 524
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+ +M GV PN+ TF+GVL C H GLV++ R FASM H I PN++HYGCMVD+LG
Sbjct: 525 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 584
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
R+G + EA LI SM + P+ A WG+LL +C+ HG E+ E ++LI L+P + G +VL
Sbjct: 585 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVL 644
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LSNI+A G W+D +R M++ V K+PG SLIE
Sbjct: 645 LSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIE 680
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 211/444 (47%), Gaps = 67/444 (15%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ Y+ +IF+++ N + ++N+M++AY + +E+ + L+ L+ + PD YT+ +++A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 110 CLGVGDLRVG-QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C V L G + +H +++ GF+ ++ ++ +Y CG M D K+FDE D +
Sbjct: 151 C-AVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 209
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-- 226
N ++ G+ KKGDV++ +F +M +R++V+ N MI LGK G+ EA +LF+EM ++
Sbjct: 210 WNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDM 269
Query: 227 -----------------------------AFELDEATVVAVLPICARLGAVDIGQWIHSY 257
LDE VV+VL CA L V G+ IH
Sbjct: 270 VSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGL 329
Query: 258 AESSGLYRKVVSVGNALVDFYC-------------------------------KCGILDT 286
G+ V++ NAL+ Y KCG ++
Sbjct: 330 VIRMGI-ESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEK 388
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR +F +P K++VSW+A+ISG A + + L+ +M + P++ V V++ C H
Sbjct: 389 ARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTH 448
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+++ + + A + + + N+ ++D+ + GCV A ++ M + W
Sbjct: 449 LAALDQGKWVHAYIRK-NGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EKGVSSWN 506
Query: 407 SLLSSCRTHGHVELAEHAVKELIN 430
+L+ +G VE + E+ N
Sbjct: 507 ALIIGLAVNGLVERSLDMFSEMKN 530
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/461 (38%), Positives = 269/461 (58%), Gaps = 11/461 (2%)
Query: 24 HFLRHKLHQSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
H + H SNL + H S+CG +N YA KIF+ V+ +N ++ Y+
Sbjct: 160 HAVIHGFLDSNLFVQKGFIHLFSLCGLVN---YARKIFDMGDGWEVVTWNVVLSGYNRFK 216
Query: 80 PSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGS 136
EE +LF + K + P+ T +L AC + DL G+C++ + I+ G E
Sbjct: 217 RYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLI 276
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +++++ SCG+MD VFDEM RDVI ++ GF +D F +M ER
Sbjct: 277 LENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD 336
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSW MI + R E L LF +M+ + DE T+V++L CA LGA+++G+W +
Sbjct: 337 YVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKT 396
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + + +GNAL+D Y KCG ++ A+ +F E+ +K+ +W AMI GLA NG GE
Sbjct: 397 YIDKNKI-KNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGE 455
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ ++ M+ V+P++ T++GV+ C H GLV K + F++M H I PNL HYGCM
Sbjct: 456 EALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCM 515
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G ++EA ++I +M ++PN+ +WGSLL +CR H +V+LAE A E++ LEP N
Sbjct: 516 VDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENG 575
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL NIYA +W + +R M E +KK PG SL+E
Sbjct: 576 AVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSLME 616
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 69/452 (15%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNP 63
+ LL NT + QIH+ ++ L ++L L + C T ++ YA K+F+++ P
Sbjct: 39 ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQP 98
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
SV ++N+MIK YS SE V L+ L+ I PD +TF LLK L+ G+ +
Sbjct: 99 SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLL 158
Query: 124 GEIIRSGF-ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
+ GF + ++ G + L++ CG ++ K+FD +V+ N+++ G+
Sbjct: 159 NHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGY------ 212
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD--QAFELDEATVVAVLP 240
+ R E+ RLF EM + + T+V +L
Sbjct: 213 -------------------------NRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLS 247
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C++L + G+ I++ G+ + + NAL+D + CG +D AR VF E+ ++V+
Sbjct: 248 ACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVI 307
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAK-------------------------------G 329
SW ++++G A R +L + ++QM +
Sbjct: 308 SWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSN 367
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
V P++ T V +LT CAH G +E E + + I + ++D+ + G V +A
Sbjct: 368 VKPDEFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKA 426
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ M + + W +++ +GH E A
Sbjct: 427 KKIFNEMQ-KKDKFTWTAMIVGLANNGHGEEA 457
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 282/485 (58%), Gaps = 22/485 (4%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQMRNPSVLLFNSMI 72
T L Q+HA F++ Q L A + C + +I YA +F QM P+ +N+++
Sbjct: 31 TPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTIL 90
Query: 73 KAYSLNGP---SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
+ + E + LF A+L + + P+ +TF +LKAC LR G+ +HG I++
Sbjct: 91 RILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVK 150
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVF------------DEMSHR----DVIVRNLM 172
GF + +V +Y C M+D +F E+ R +V++ N+M
Sbjct: 151 FGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIM 210
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + GD+ LF EM RSVVSWN+MIS ++G EA+ LF EM+ + +
Sbjct: 211 IDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNY 270
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V+VLP AR+GA+++G+WIH YA + + V +G+ALVD Y KCG +D A VF+
Sbjct: 271 VTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV-LGSALVDMYSKCGSIDKALQVFE 329
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P++N ++W+A+I A +GR E + + M GV+PN ++G+L+ C+HAGLVE+
Sbjct: 330 TLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEE 389
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R F+ M + + P +EHYGCMVD+LGR+G + EA +LIR+M I P+ IW +LL +C
Sbjct: 390 GRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGAC 449
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ H ++++ E + L+ L P +SG+YV LSN+YA G W+ +R+ M+ +++K PG
Sbjct: 450 KMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPG 509
Query: 473 QSLIE 477
S IE
Sbjct: 510 CSWIE 514
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 277/488 (56%), Gaps = 11/488 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+++ LL +T L QIH + + Q N +L +S T + A K+F ++
Sbjct: 17 LQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERI 76
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NPS ++N MI+ +S + + V+L+ + P+E+T++ L+ C LR G+
Sbjct: 77 ENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGE 136
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMD---DGMKVFDEMSHRDVIVRNLMIHGFC 177
VHG ++ +G+ +R +V LY G D +VFDE+ R+++ N ++ G+
Sbjct: 137 QVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYV 196
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+ GDVD +F EM ER+VVSW MI+ + GR +AL LFHEMR +LD+ +VA
Sbjct: 197 RCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVA 256
Query: 238 VLPICARLGAVDIGQWIHSYAES---SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
L CA LG + +G WIHSY + +G +VS+ N+L+ Y CG++D A VF +
Sbjct: 257 ALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGM 316
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS---PNKATFVGVLTCCAHAGLVE 351
+++ +SW +MI+G A G E + +++ M G P+ TF+GVL C+HAG V+
Sbjct: 317 QQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVD 376
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R F M IVP +EHYGCMVD+L R+G + EA+ LI SM ++PN A+WG+LL
Sbjct: 377 QGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 436
Query: 412 CRTHGHVELAEHAVKEL-INLEPWNSGNY-VLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
CR H + ELA H ++L + L+P + Y VLLSN+YA RW D +R M E V+K
Sbjct: 437 CRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRK 496
Query: 470 SPGQSLIE 477
G+S ++
Sbjct: 497 PAGRSWVQ 504
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 285/519 (54%), Gaps = 47/519 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I LL T + L Q+HA +R LHQ + +++ F+++C +L+ Y T +FN + +PS
Sbjct: 28 ISTLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSSPS 87
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+L+N+ IK YS N V LF +K PD++T+ L+KAC V ++ G HG
Sbjct: 88 TVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHG 147
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQ-------------------------------MDD 153
+R G + +++LY CG+ + +
Sbjct: 148 SAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE 207
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
K+FDEM ++ + N +I G+ K GD+ +F EM R+VVS+ MI KSG
Sbjct: 208 ARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDM 267
Query: 214 SEALRLFHEMRDQA----------------FELDEATVVAVLPICARLGAVDIGQWIHSY 257
+ A +F E ++ + DE +V+++ C+++G++++ +W+ Y
Sbjct: 268 ASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDY 327
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
S + V AL+D KCG +D A +F+E+P+++++S+ +M+ GL+ +G G
Sbjct: 328 VRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQ 387
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
V L+ +M+ +G++P+ F +LT C+ AGLV++ F SM +SIVP+ +HY CMV
Sbjct: 388 AVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMV 447
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G ++EAY+L++SM + P+A WG+LL +C+ H +EL E +L LEP N+G
Sbjct: 448 DLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAG 507
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
NYVLLSNIYA +W D LR MRE ++K PG S I
Sbjct: 508 NYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 291/511 (56%), Gaps = 36/511 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E + L+H NT L QIHA H L ++ ++ +S +L + YA IF
Sbjct: 40 ETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD 99
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P++ +FN++I+ + N E V F L+ L I PD T +LK+ + D+ +G+C
Sbjct: 100 HPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRC 159
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD----VIVRNLMIHGFC 177
+HG +++ G E +R+ +V++Y G++ G+++FDE R+ +++ N++I+G C
Sbjct: 160 LHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCC 219
Query: 178 K-------------------------------KGDVDKGLYLFREMRERSVVSWNLMISS 206
K GD+D+ LF +M E++VVSW MI+
Sbjct: 220 KVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMING 279
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
++G +AL +F M ++ ++ TVV+ L C ++GA+ +G+ IH+Y S+G ++
Sbjct: 280 FSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNG-FQL 338
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+G ALVD Y KCG + +A VF E K++++W+ MI G A +G + ++ + +M
Sbjct: 339 NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMK 398
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+ G++P++ F+ +LT C+H+G V++ F SM +SI P ++HY +VD+LGR+G +
Sbjct: 399 SAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRL 458
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
EA I+SM I P+ IWG+L +CR H ++E+AE ++L+ LEP + G+YV LSN+Y
Sbjct: 459 DEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVY 518
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A GRW+D E +R M+ V+K PG S IE
Sbjct: 519 AAVGRWEDVERVRTLMKNRGVEKDPGWSYIE 549
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 177/482 (36%), Positives = 274/482 (56%), Gaps = 38/482 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIF---- 57
E+ L LL N LTQIH H L+ LH + L+L F S+ ++ YA
Sbjct: 29 EQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAE 88
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEE-PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
R LFN++I+AY+ G S++ + L+ ++ + I P+++T+ +LKAC G+ L
Sbjct: 89 ADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVL 148
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+GQ VHG +++ GF+ C D+ V+N M+H +
Sbjct: 149 NLGQTVHGSVVKFGFD---------------C----------------DIHVQNTMVHMY 177
Query: 177 -CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
C G ++ +F EM + V+W+ MI + GR +EA+ LF EM+ DE T+
Sbjct: 178 SCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITM 237
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V++L C LGA+++G+WI +Y E ++ K V V NAL+D + KCG + A +F+ +
Sbjct: 238 VSMLSACTDLGALELGKWIEAYIERHEIH-KPVEVSNALIDMFAKCGDISKALKLFRAMN 296
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K +VSW ++I G+A +GRG+ L+E+M + GV+P+ F+G+L+ C+H+GLVE+ RE
Sbjct: 297 EKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGRE 356
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F SM + +VP +EHYGCMVD+ R+G V+EA + +R+M I PN I +L+S+CR H
Sbjct: 357 YFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGH 416
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G +L E K L+ EP + NYVLLSNIYA+ W+ +R M +KK PG ++
Sbjct: 417 GEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTM 476
Query: 476 IE 477
IE
Sbjct: 477 IE 478
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 164/426 (38%), Positives = 264/426 (61%), Gaps = 3/426 (0%)
Query: 54 TKIFNQMRNPS-VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
T +FN+ + + V +NS+I + +G S E ++ F+ ++ L + P+ TF +K+C
Sbjct: 29 TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA 88
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G+ H + + GFE + +V++Y+ CG++ D +FDE+SHR+++ M
Sbjct: 89 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 148
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
I G+ + D + L +F M ER V+SWN +I+ ++G +E++ +FH M +D +
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
T+ AVL CA G+ +G+ IH GL V VG +++D YCKCG ++ AR F
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF-VGTSIIDMYCKCGKVEMARKAF 267
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ KNV SW+AM++G +G + +E++ +M GV PN TFV VL C+HAGL+E
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F +M+ + P +EHYGCMVD+LGR+G ++EA+DLI+ M +RP+ +WG+LL +
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR H +V+L E + ++L L+P N G YVLLSNIYA+ GRW+D E +R+ M+ + + K P
Sbjct: 388 CRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPP 447
Query: 472 GQSLIE 477
G SL++
Sbjct: 448 GFSLVD 453
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACL 111
A ++F+ M V+ +NS+I Y+ NG S E +++F ++K+ I + T + +L AC
Sbjct: 161 ALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACA 220
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
G R+G+C+H ++I+ G E + ++++Y CG+++ K FD M ++V +
Sbjct: 221 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 280
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
M+ G+ G G EAL +F+EM + +
Sbjct: 281 MVAGY-------------------------------GMHGHAKEALEVFYEMNMAGVKPN 309
Query: 232 EATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
T V+VL C+ G ++ G W + + + V G +VD + G L A ++
Sbjct: 310 YITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG-CMVDLLGRAGYLKEAFDL 368
Query: 291 FKEIP-RKNVVSWNAMISGLAFNGRGELG 318
K + R + V W A++ + +LG
Sbjct: 369 IKGMKLRPDFVVWGALLGACRMHKNVDLG 397
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ L + + + + +++ A K F++MR +V +++M+ Y ++G
Sbjct: 231 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 290
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGFERFG 135
++E +++F + G+ P+ TF +L AC G L G H + G E +G
Sbjct: 291 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG 350
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCK-KGDVDKGLYLFREMR 193
+ V+L G + + + M R D +V ++ G C+ +VD G R++
Sbjct: 351 CM----VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL-GACRMHKNVDLGEISARKLF 405
Query: 194 E 194
E
Sbjct: 406 E 406
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 292/540 (54%), Gaps = 64/540 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E K + LL L QI A + H L ++ + +F++ C I +A K+F+++
Sbjct: 11 VEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKI 70
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
P+ +N+M + Y NG + V LF L + P+ +TF ++K+C + +R G+
Sbjct: 71 PQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGE 130
Query: 121 CVHGEIIRSGF-------------------------------ERFGSIRIGVVELYTSCG 149
VH + GF ER + ++ Y CG
Sbjct: 131 EVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCG 190
Query: 150 QMDDGMKVFD-------------------------------EMSHRDVIVRNLMIHGFCK 178
+ G ++FD +M +RD + N M++G+
Sbjct: 191 DVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAV 250
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVA 237
G+V+ +F EM ER+V SWN +I K+G SE L F M + + ++ T+VA
Sbjct: 251 NGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVA 310
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
VL C+RLGA+D+G+W+H YAES G Y+ + VGN L+D Y KCG+++ A VF + RK
Sbjct: 311 VLSACSRLGALDMGKWVHVYAESIG-YKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRK 369
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+++SWN +I+GLA +G + ++++M ++G P+ TFVG+L+ C H GLV+ F
Sbjct: 370 DIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYF 429
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM +SIVP +EHYGCMVD+LGR+G + +A + IR M I P+A IW +LL +CR + +
Sbjct: 430 KSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKN 489
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VE+AE A++ LI LEP N N+V++SNIY + GR +D L++ MR+ +K PG S+IE
Sbjct: 490 VEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIE 549
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 281/465 (60%), Gaps = 8/465 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q HA + H L + + A V++ + ++ A +F+++ NPS LL+NS+I+AY+ +G
Sbjct: 98 QAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHG 157
Query: 80 PSEEP---VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
++ +A + LG+ D +T +LK+C + + +G+CVHG+ +R G E
Sbjct: 158 XXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFY 217
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG + D K+FD+M RD+ N +I G+ K+G++ LF M R+
Sbjct: 218 VGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRN 277
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE--ATVVAVLPICARLGAVDIGQWI 254
+VSW MIS ++G +AL LF EM E+ T+V+VLP CA+ A++ G+ I
Sbjct: 278 IVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI 337
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLAFN 312
H +A GL+ SV AL Y KC L AR F I + KN+++WN MI+ A +
Sbjct: 338 HDFANGIGLHLNS-SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASH 396
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G V ++E M+ GV P+ TF+G+L+ C+H+GL++ F M +HS+ P +EH
Sbjct: 397 GCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEH 456
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y C+VD+LGR+G + EA +LI M ++ ++WG+LL++CR+H ++E+AE A + L LE
Sbjct: 457 YACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLE 516
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P NSGNYVLLSN+YAE G W++ + LR ++ +KKSPG S IE
Sbjct: 517 PDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIE 561
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 175/493 (35%), Positives = 279/493 (56%), Gaps = 33/493 (6%)
Query: 18 LTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L Q+HA + + L+ + +L FVS + YA ++F Q+ P + ++N+MI+
Sbjct: 29 LKQLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGS 88
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ V L+ ++N G+ PD++TF+ +LKAC + +++G +HG++++SGF+
Sbjct: 89 AQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNT 148
Query: 136 SIRIGVVELYTSC-------------------------------GQMDDGMKVFDEMSHR 164
+R ++ + +C G++D ++FDEM +
Sbjct: 149 FVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMK 208
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N+MI + K G+++K LF E+ ++ VV+WN MI+ S + EAL +F MR
Sbjct: 209 DLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMR 268
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D D+ T++++L A LG ++IG+ IH V + NAL+D Y KCG +
Sbjct: 269 DLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSI 328
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A VF+ + +K+ SWN++I GLA +G E + L+++M+ + PN+ TFV VL C
Sbjct: 329 GNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVAC 388
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAG V + R F M + I PN++HYGCMVD+LGR+G + EA+D I +M I PNA I
Sbjct: 389 SHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAII 448
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W +LL +CR HG VEL A ++L+ + SG+YVLLSNIYA G WD + +R M +
Sbjct: 449 WRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDD 508
Query: 465 NNVKKSPGQSLIE 477
VKK G SLI+
Sbjct: 509 GGVKKKVGHSLID 521
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 266/462 (57%), Gaps = 3/462 (0%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVC--GTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L IHAH LR L + ++ C T N + YA ++ +Q++NP++ ++N++I+
Sbjct: 33 LKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIRGC 92
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S + E + G+ PD T L+KAC + + +G HG+ I+ GFE+
Sbjct: 93 STSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDF 152
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ +V +Y S G ++ VF M DV+ MI G+ + GD LF M ER
Sbjct: 153 YVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPER 212
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
++V+W+ MIS ++ +A+ F ++ + +E +V V+ CA LGA+ +G+ H
Sbjct: 213 NLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAH 272
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + L ++ +G A+VD Y +CG ++ A VF+++P K+V+ W A+I+GLA +G
Sbjct: 273 EYVMRNKLSLNLI-LGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYA 331
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E + + +M KG P TF VLT C+HAG+VE+ E+F SM H + P LEHYGC
Sbjct: 332 EKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGC 391
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G +R+A + M ++PNA IW +LL +CR H +VE+ E K L+ ++P
Sbjct: 392 MVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEY 451
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SG+YVLLSNIYA +W D +R M++ V+K PG SLIE
Sbjct: 452 SGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIE 493
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 285/510 (55%), Gaps = 36/510 (7%)
Query: 2 ERKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIF 57
++ +L+L ++ + +LTQ+HA LR Q + + + + +A K+F
Sbjct: 31 QKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVF 90
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ + NP+V ++N +IK N + + + + + P+++T+ L KAC ++
Sbjct: 91 SSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQ 149
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK--------------------- 156
G+ +HG +++ G I+ +++Y S G+++D K
Sbjct: 150 EGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLK 209
Query: 157 ---------VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
+F +M +++ N+MI+G K G++ LF EM ER +SW+ M+
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+GR EAL +F +M+ + + +VL C+ +GA+D G+W+H+Y + + +
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
V +G AL+D Y KCG LD VF+E+ + + +WNAMI GLA +GR E +EL+ ++
Sbjct: 330 V-LGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ PN T VGVLT CAHAG V+K +F +M + + P LEHYGCMVD+LGRSG
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA DLI SM ++PNAA+WG+LL +CR HG+ +LAE K L+ LEP NSG YVLLSNIYA
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ GR+DD +R M+ +K PG S+++
Sbjct: 509 KVGRFDDVSKIRKLMKNRGIKTVPGVSIVD 538
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/470 (37%), Positives = 274/470 (58%), Gaps = 5/470 (1%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + HL QIHA LR L+ + ++ L + + +FN P+V
Sbjct: 53 LIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFS 112
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
F+++I ++ + + ++ + + G+ P+ +TF+ +LK+C L G+ +H + I
Sbjct: 113 FSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAI 168
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ G +R G+V++Y G + ++FD+M R ++ M+ + K G++DK
Sbjct: 169 KLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARS 228
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF M+ER VV WN+MI +SG +E+L+LF M +E TV+AVL C +LGA
Sbjct: 229 LFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGA 288
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
++ G+WIHSY E+ G+ V VG AL+D Y KCG L+ AR VF I K+VV+WN+MI
Sbjct: 289 LESGRWIHSYIENKGIQINV-HVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIV 347
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G + ++L+E+M G P TF+G+L+ C H GLVE+ R F M + I
Sbjct: 348 GYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIE 407
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMV++LGR+G + EAY L+++M+I + +WG+LL CR H +++L E K
Sbjct: 408 PKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKF 467
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L++ + NSG YVLLSN+YA G W+ +R M+E+ ++K G S IE
Sbjct: 468 LVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIE 517
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 285/533 (53%), Gaps = 72/533 (13%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ HL QIHA + L +S ++ FV+ + EI YA K+F++ PSV L+N++I+
Sbjct: 84 KRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRG 143
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS + + +++++ ++ G+ PD +T +LKAC GV L VG+ VHG+I R GFE
Sbjct: 144 YSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD 203
Query: 135 GSIRIGVVELYTSCGQ----------MDD---------------------GMKVFDEMSH 163
++ G+V LY CG+ +DD +++F +M
Sbjct: 204 VFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQ 263
Query: 164 RDV-------------------IVRNLMIHG--------------------FCKKGDVDK 184
R+V + + IHG + K G V
Sbjct: 264 RNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMV 323
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
F +M +V+ WN MIS K+G +EA+ LF EM + D TV + + CA+
Sbjct: 324 ARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQ 383
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+G++D+ +W+ Y + YR V V AL+D + KCG +D AR VF K+VV W+A
Sbjct: 384 VGSLDLAKWMGDYINKTE-YRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSA 442
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI G +GRG+ ++L+ M GV PN TFVG+LT C H+GLVE+ ELF SM +
Sbjct: 443 MIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMK-YY 501
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I +HY C+VD+LGRSG + EAYD I +M I P ++WG+LL +C+ + HV L E+A
Sbjct: 502 GIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYA 561
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++L +L+P+N+G+YV LSN+YA WD +R+ MRE + K G SLIE
Sbjct: 562 AEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIE 614
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 178/480 (37%), Positives = 296/480 (61%), Gaps = 19/480 (3%)
Query: 13 NTRTHLTQIHAHFLR-----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
T HL QIHAHF++ H L + L+ F+++ T EIKYA K F+Q+ +P+
Sbjct: 26 KTTRHLKQIHAHFIKTGQIHHPLAAAELL--KFLTL-STQREIKYARKFFSQIHHPNCFS 82
Query: 68 FNSMIKAYS-------LNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+N++I+A + + S E + F+ +L + + P+++TF +LKAC + + G
Sbjct: 83 WNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEG 142
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCK 178
+ +HG +++ G +R +V +Y CG M D +F + +V++ N+MI G+ +
Sbjct: 143 KQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVR 202
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
GD+ LF M +SVVSWN+MIS ++G EA+ +FH+M+ + T+V+V
Sbjct: 203 MGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSV 262
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRK 297
LP +RLGA+++G+W+H +AE + + V +G+AL+D Y KCG +D A VF+ I +K
Sbjct: 263 LPAVSRLGAIELGKWVHLFAEKNEIEIDDV-LGSALIDMYSKCGSIDKAVQVFEGIRNKK 321
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
N ++W+A+I GLA +GR ++ + +M GV+P+ ++GVL+ C+HAGLVE+ R ++
Sbjct: 322 NPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIY 381
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
M + ++P +EHYGCMVD+LGR+GC+ EA LI +M ++P+ I +LL +C+ HG+
Sbjct: 382 YHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGN 441
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+E+ E K L+ P +SG+YV LSN++A G W+ +R+ M+E +++K PG S IE
Sbjct: 442 IEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIE 501
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 268/497 (53%), Gaps = 38/497 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +H+ + L ++ + + +L ++ A K+F+++ +V++ N MI++Y
Sbjct: 59 LRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVN 118
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG E +++F + + + PD YTF +LKAC G++ +G+ +HG + G +
Sbjct: 119 NGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFV 178
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---- 193
G+V +Y CG + + V DEMS RDV+ N ++ G+ + D L + REM
Sbjct: 179 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKI 238
Query: 194 ---------------------------------ERSVVSWNLMISSLGKSGRDSEALRLF 220
++S+VSWN+MI K+ EA+ L+
Sbjct: 239 SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 298
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M FE D ++ +VLP C A+ +G+ IH Y E L ++ + NAL+D Y K
Sbjct: 299 SGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAK 357
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG LD AR+VF+ + ++VVSW AMIS F+GRG V L+ +M G+ P+ FV
Sbjct: 358 CGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTT 417
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C+HAGL+E+ R F MT + I P LEH CMVD+LGR+G V+EAY I+ M + P
Sbjct: 418 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEP 477
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
N +WG+LL +CR H + ++ A +L L P SG YVLLSNIYA+ GRW++ +R
Sbjct: 478 NERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 537
Query: 461 WMRENNVKKSPGQSLIE 477
M+ +KK+PG S +E
Sbjct: 538 IMKSKGLKKNPGASNVE 554
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 163/369 (44%), Gaps = 63/369 (17%)
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
DL+ + VH II S+ + ++ Y S + KVFDE+ R+VI+ N+MI
Sbjct: 55 DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
+ V+ G Y E +++F M + D T
Sbjct: 115 SY-----VNNGFY--------------------------REGIQVFGTMCSCHVKPDHYT 143
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
VL C+ G + IG+ IH A GL + VGN LV Y KCG L AR V E+
Sbjct: 144 FPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLF-VGNGLVSMYGKCGFLSEARLVLDEM 202
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL--VEK 352
R++VVSWN++++G A N R + +E+ +M + +S + T +L ++ V
Sbjct: 203 SRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 262
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLL 409
+++F M G S+V + M+ V ++ EA +L M P+A S+L
Sbjct: 263 VKDMFFKM-GKKSLV----SWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317
Query: 410 SSC----------RTHGHVELAEHAVKELI-NLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+C + HG++E K+LI NL N+ L ++YA+ G D A +
Sbjct: 318 PACGDTSALSLGKKIHGYIER-----KKLIPNLLLENA-----LIDMYAKCGCLDRARDV 367
Query: 459 RMWMRENNV 467
M+ +V
Sbjct: 368 FENMKSRDV 376
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 280/510 (54%), Gaps = 34/510 (6%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
++ +L + +T L + A ++ Q ++ F+S LN + Y F QM
Sbjct: 38 FKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQM 97
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V ++N+MIK + G ++ + +L+ + P YTF+ L+KAC + + +G
Sbjct: 98 ENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELG 157
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTS-------------------------------C 148
Q VH I + GFE ++ +V+ Y+
Sbjct: 158 QMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARV 217
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G MD K+F+EM R+ N MI G+ + G+V+ LF +M + ++SW MI+
Sbjct: 218 GDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYS 277
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ + +AL ++ EMR DE T+ V CA +GA+++G+ IH Y S GL V
Sbjct: 278 QNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVY 337
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+G+ALVD Y KCG LD + +F ++ KN+ WNA+I GLA +G E + ++ M +
Sbjct: 338 -IGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMERE 396
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+ PN TF+ +L+ C HAGLV++ R F SMT + I P++ HYGCMVD+L +SG + E
Sbjct: 397 KIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNE 456
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +LI+SM PN+ IWG+LL+ C+ HG+ E+AE AV++L+ LEP NSG+Y LL ++YAE
Sbjct: 457 ALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAE 516
Query: 449 GGRWDDAETLRMWMRENNV-KKSPGQSLIE 477
W + +R M+E V KK PG S IE
Sbjct: 517 EKDWMEVAHIRSMMKEKGVEKKYPGSSWIE 546
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 280/496 (56%), Gaps = 39/496 (7%)
Query: 18 LTQIHAHFLRHKLHQSN-----LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
L QIHA + + + LI A +++ GT+ YA ++F + P ++N+MI
Sbjct: 29 LKQIHASMIVKGFNSNTSALRELIYASSIAISGTM---AYAHQLFPHITEPDTFMWNTMI 85
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ + + + L++ ++N + PD++TF +LKAC + +++G VHG + R GFE
Sbjct: 86 RGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFE 145
Query: 133 RFGSIRIGVVELYTSCGQMD------DG-------------------------MKVFDEM 161
+R ++ + +CG + DG ++FDEM
Sbjct: 146 SNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEM 205
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+D++ N+MI G+ K+G+++ LF E+ +R VV+WN MI+ G + +AL +F
Sbjct: 206 PVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFE 265
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
EMR DE T++++L C LG +D GQ IH G V +GNAL+D Y KC
Sbjct: 266 EMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKC 325
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G + A VF+ + K+V +WN+++ GLAF+G E + L+ +M + P++ TFVGVL
Sbjct: 326 GSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVL 385
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+HAG VE+ R+ F M ++I PN+ HYGCMVD+LGR+G + EA+D I +M I PN
Sbjct: 386 VACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPN 445
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A +W +LL +CR HG+VEL A +L+ + SG+YVLLSNIYA G WD E +R
Sbjct: 446 AIVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKL 505
Query: 462 MRENNVKKSPGQSLIE 477
M ++ V+K G SLIE
Sbjct: 506 MDDSGVRKEAGCSLIE 521
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 280/510 (54%), Gaps = 34/510 (6%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
++ +L + +T L + A ++ Q ++ F+S LN + Y F QM
Sbjct: 135 FKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQM 194
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V ++N+MIK + G ++ + +L+ + P YTF+ L+KAC + + +G
Sbjct: 195 ENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELG 254
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTS-------------------------------C 148
Q VH I + GFE ++ +V+ Y+
Sbjct: 255 QMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARV 314
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G MD K+F+EM R+ N MI G+ + G+V+ LF +M + ++SW MI+
Sbjct: 315 GDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYS 374
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ + +AL ++ EMR DE T+ V CA +GA+++G+ IH Y S GL V
Sbjct: 375 QNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVY 434
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+G+ALVD Y KCG LD + +F ++ KN+ WNA+I GLA +G E + ++ M +
Sbjct: 435 -IGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMERE 493
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+ PN TF+ +L+ C HAGLV++ R F SMT + I P++ HYGCMVD+L +SG + E
Sbjct: 494 KIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNE 553
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +LI+SM PN+ IWG+LL+ C+ HG+ E+AE AV++L+ LEP NSG+Y LL ++YAE
Sbjct: 554 ALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAE 613
Query: 449 GGRWDDAETLRMWMRENNV-KKSPGQSLIE 477
W + +R M+E V KK PG S IE
Sbjct: 614 EKDWMEVAHIRSMMKEKGVEKKYPGSSWIE 643
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/477 (36%), Positives = 279/477 (58%), Gaps = 11/477 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLH---QSNLILA----HFVSVCGTLNEIKYATKIFNQM 60
LL R L ++ + L H LH S++ ++ H + CG L+ A K+F++
Sbjct: 112 LLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDG---ARKMFDKS 168
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++ +NSMI Y G + E + + +K GI PDE T ++ +C + DL +G+
Sbjct: 169 CVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGR 228
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H I +G + + ++++Y CG ++ K+FD M+++ ++ M+ G+ + G
Sbjct: 229 ESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSG 288
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+D LF EM ++ VV WN MI + R EAL LF+EM+ DE T+V+ L
Sbjct: 289 LLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 348
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C++LGA+D+G WIH Y E L V ++G AL+D Y KCG + A VF+E+P +N +
Sbjct: 349 ACSQLGALDVGIWIHHYIEKHELSLNV-ALGTALIDMYAKCGKITKAIQVFQELPGRNSL 407
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+W A+ISGLA +G + + +MI V P++ TF+G+L+ C H GLVE+ R+ F+ M
Sbjct: 408 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 467
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ P L+HY CMVD+LGR+G + EA +LI+SM I +A +WG+L +CR HG+V +
Sbjct: 468 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLM 527
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A +L+ ++P +SG YVLL+N+Y E W +A R MR+ V+K+PG S IE
Sbjct: 528 GERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIE 584
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 208/460 (45%), Gaps = 68/460 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRN 62
L LL + + L QI + + L + + ++ C ++ Y T I RN
Sbjct: 9 FLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRN 68
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P+ +N I+ + + E V L+ +L+ G PD YT+ L KAC + +R+G
Sbjct: 69 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 128
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+ G ++ GF+ + V+ L SCG +D K+FD+ RD++ N MI+G+ ++G
Sbjct: 129 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRG- 187
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
W EAL + EM+ + + DE T++ V+
Sbjct: 188 ------------------WAY------------EALNFYREMKVEGIKPDEVTMIGVVSS 217
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR------------- 288
CA+L +D+G+ H Y E +GL + V + NAL+D Y KCG L++AR
Sbjct: 218 CAQLEDLDLGRESHCYIEENGL-KLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVS 276
Query: 289 ------------------NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+F E+P K+VV WNAMI G RG+ + L+ +M A +
Sbjct: 277 WTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNI 336
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
+P++ T V L+ C+ G ++ + + H + N+ ++D+ + G + +A
Sbjct: 337 NPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAI 395
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ + + R N+ W +++S HG+ A E+I+
Sbjct: 396 QVFQELPGR-NSLTWTAIISGLALHGNAHGAIAYFSEMID 434
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/510 (34%), Positives = 284/510 (55%), Gaps = 36/510 (7%)
Query: 2 ERKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIF 57
++ +L+L ++ + +LTQ+H LR Q + + + + +A K+F
Sbjct: 31 QKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVF 90
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ + NP+V ++N +IK N + + + + + P+++T+ L KAC ++
Sbjct: 91 SSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQ 149
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK--------------------- 156
G+ +HG +++ G I+ + +Y S G+++D K
Sbjct: 150 EGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLK 209
Query: 157 ---------VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
+F +M +++ N+MI+G K G++ LF EM ER +SW+ M+
Sbjct: 210 CGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+GR EAL +F +M+ + + +VL C+ +GA+D G+W+H+Y + + +
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
V +G AL+D Y KCG LD VF+E+ + + +WNAMI GLA +GR E +EL+ ++
Sbjct: 330 V-LGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ PN T VGVLT CAHAG V+K +F +M + + P LEHYGCMVD+LGRSG
Sbjct: 389 GRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFS 448
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA DLI SM ++PNAA+WG+LL +CR HG+ +LAE K L+ LEP NSG YVLLSNIYA
Sbjct: 449 EAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYA 508
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ GR+DD +R M++ +K PG S+++
Sbjct: 509 KVGRFDDVSKIRKLMKDRGIKTVPGVSIVD 538
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/477 (38%), Positives = 276/477 (57%), Gaps = 6/477 (1%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL---NEIKYATKIFNQM 60
+IL L + T HL Q+HA + H H S L+ S+ + YA IF+ +
Sbjct: 69 QILSLFNPCKTLRHLKQVHAQIITH--HNSPFQLSALASLSALSPFPTFLAYAKTIFHHL 126
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+NP L+NS+I+A S + E + L+ + G+ PD T+ ++KAC G
Sbjct: 127 QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGL 186
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +++SGFE I ++ LY + + ++F+ S RDV+ N MI G+ K
Sbjct: 187 LVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHV 246
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
++ +F M R V+SWN MI+ G+ +EAL LF +MR + EATVV++L
Sbjct: 247 EMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLS 306
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+D G +H+Y + + + VG ALVD Y KCG + A VF + K+V+
Sbjct: 307 ACAHLGALDKGLHLHTYINDNRIEVNSI-VGTALVDMYAKCGKISLATQVFNAMESKDVL 365
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+WN +I+G+A +G + +L+++M GV PN TFV +L+ C+HAG+V++ ++L M
Sbjct: 366 AWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCM 425
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ + I P +EHYGC++D+L R+G + EA +LI +M + PN + G+LL CR HG+ EL
Sbjct: 426 SSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFEL 485
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E K LINL+P +SG Y+LLSNIYA +WDDA +R M+ N + K PG S+IE
Sbjct: 486 GEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE 542
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 264/458 (57%), Gaps = 2/458 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + ++ + V+ + A + ++ + +++N++I ++
Sbjct: 65 VHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRR 124
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKAC-LGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E F + G P T+ +L AC G GD+ +G VHG ++ SG +
Sbjct: 125 FGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVEN 184
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V++Y C M+ K+FD M R V+ ++ G + G VD+ LF M ER VS
Sbjct: 185 ALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVS 244
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W MI ++ R EAL +F EM+ DE T+V+V+ CA+LGA+++G+W+ Y
Sbjct: 245 WTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMS 304
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G+ VGNAL+D Y KCG ++ A +VFK++ ++ +W A+I GLA NG GE +
Sbjct: 305 RQGIKMDAF-VGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAI 363
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
E++ +MI +P++ TF+GVLT C HAGLV+K RE F SM ++I PN+ HYGC++D+
Sbjct: 364 EMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDL 423
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + EA D I M + PN+ IWG+LL++CR HG+ E+ E + L+ ++P NS Y
Sbjct: 424 FGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVY 483
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNIYA+ RW+D LR + E +KK PG SLIE
Sbjct: 484 TLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIE 521
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 160/422 (37%), Gaps = 77/422 (18%)
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
E+ V +A + G PD YTF PLLKA + VH +++ G R + +
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV-VSW 200
V Y + G + E RER V W
Sbjct: 85 VTAYAAGGDGAAARALLSE--------------------------------RERDTPVVW 112
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR-LGAVDIGQWIHSYAE 259
N +IS + R EA F +M T V+VL C + G V +G +H
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVV 172
Query: 260 SSGLYRKVVSVGNALVDFYCKC-------------------------------GILDTAR 288
SG+ + V NALVD Y +C G +D AR
Sbjct: 173 GSGVLPD-LRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEAR 231
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
++F +P ++ VSW AMI G R +E++ +M VS ++ T V V+T CA G
Sbjct: 232 DLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLG 291
Query: 349 LVEKAR--ELFASMTG--LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+E ++ S G + + V N ++D+ + G + A D+ + M R +
Sbjct: 292 ALEMGEWVRVYMSRQGIKMDAFVGN-----ALIDMYSKCGSIERALDVFKDMHHR-DKFT 345
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINL-EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
W +++ +G+ E A +I + E + ++ + G D + MR
Sbjct: 346 WTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMR 405
Query: 464 EN 465
E
Sbjct: 406 ET 407
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 282/512 (55%), Gaps = 36/512 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L+H N+ L QIH R + S+ ++ F+S C +LN + YA IF +
Sbjct: 41 LETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRF 100
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ LFN++I+ + N E + F L+ I PD TF +LK+ + + VG+
Sbjct: 101 ELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGR 160
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE----MSHRDVIVRNLMIHGF 176
+H I++ G E +R+ +V++Y ++ +KVFDE + + V++ N++IHG+
Sbjct: 161 ALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGY 220
Query: 177 CKKGDV-------------DKGLY------------------LFREMRERSVVSWNLMIS 205
C+ GD+ D G + LF +M E++VVSW M++
Sbjct: 221 CRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVN 280
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++G +AL F M ++ ++ T+V+ L CA++GA+D G IH+Y +G
Sbjct: 281 GFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKL 340
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+V +G ALVD Y KCG ++ A VF E K ++ W+ MI G A +G ++ +E M
Sbjct: 341 NLV-IGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWM 399
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
G P+ F+ VL C+H+G V + + F +M + I P+++HY +VD+LGR+G
Sbjct: 400 KFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGR 459
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EA IR+M I P+ +WG+L +CRTH +VE+AE A K+L+ LEP + G+YV LSN
Sbjct: 460 LDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNA 519
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA GRWDDAE +R+ MR++ K PG S IE
Sbjct: 520 YASVGRWDDAERVRVSMRDHGAHKDPGWSFIE 551
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/482 (36%), Positives = 273/482 (56%), Gaps = 37/482 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+ L +L NT L Q+H H ++ + L+L F S L+ I YA + +
Sbjct: 6 VEQPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSV 65
Query: 61 RNPSV---LLFNSMIKAYSLNGPSE-EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
+ V LF+++I+AY+ + S+ + + L+ GI P++Y F +LKAC G+ DL
Sbjct: 66 EDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDL 125
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+G+ VHG +++ GF DD D+ V+N M+H +
Sbjct: 126 NLGKAVHGSLVKFGF--------------------DD-----------DIFVQNTMVHMY 154
Query: 177 CK-KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
C G ++ LF EM + V+W MI + G+ + A+ LF +M+ D+ T+
Sbjct: 155 CCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTM 214
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+VL C LGA+++G+WI SY E + K V + NALVD + KCG +D A +F+ +
Sbjct: 215 VSVLSACTDLGALELGKWIESYIEKERVL-KTVELSNALVDMFAKCGDVDKALGLFRNMS 273
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++ +VSW ++I GLA +GRG V L+E+M A G+ P F+G+L+ C+H+GLVE+ R+
Sbjct: 274 KRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQ 333
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F+ MT IVP +EHYGCMVD+L R+G V EA + + M I PN IW +L+S+CR H
Sbjct: 334 YFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVH 393
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G ++L E K+LI EP + NYVLLSNIY + W+ +R+ M + ++K PG ++
Sbjct: 394 GELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTM 453
Query: 476 IE 477
IE
Sbjct: 454 IE 455
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 271/476 (56%), Gaps = 11/476 (2%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
+T L QIH + + Q N +L +S T + A K+F ++ NPS ++N MI
Sbjct: 45 DTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMI 104
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ +S + + V+L+ + P+E+T++ L+ C LR G+ VHG ++ +G+
Sbjct: 105 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164
Query: 133 RFGSIRIGVVELYTSCGQMD---DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
+R +V LY G D +VFDE+ R+++ N ++ G+ + GDVD +F
Sbjct: 165 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 224
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
EM ER+VVSW MI+ + GR +AL LFHEMR +LD+ +VA L CA LG +
Sbjct: 225 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 284
Query: 250 IGQWIHSYAES---SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+G WIHSY + +G +VS+ N+L+ Y CG++D A VF + +++ +SW +MI
Sbjct: 285 LGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMI 344
Query: 307 SGLAFNGRGELGVELYEQMIAKGVS---PNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+G A G E + +++ M G P+ TF+GVL C+HAG V++ R F M
Sbjct: 345 TGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKK 404
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
IVP +EHYGCMVD+L R+G + EA+ L SM ++PN A+WG+LL CR H + ELA H
Sbjct: 405 WGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELASH 464
Query: 424 AVKELI-NLEPWNSGNY-VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++L+ L+P + Y VLLSN+YA RW D +R M E V+K G+S ++
Sbjct: 465 VAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQ 520
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 278/477 (58%), Gaps = 3/477 (0%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQM 60
R++L LL T H+ QI +H +S C +I +A +F +
Sbjct: 14 RRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSL 73
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ ++N+M++A++ + L+ + + G P+ YTF+ LL+AC + DL G
Sbjct: 74 PRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGI 133
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H + +R G+E + ++ G++ LY SC MD ++FD +RDV+ +I+G+ K G
Sbjct: 134 LLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSG 193
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
V LF EM E++ VSW+ MI+ + G EAL LF++M+ F + +V L
Sbjct: 194 QVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALT 253
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+D G+WIH+Y + + + + +G AL+D Y KCG ++TA VF E+ ++V
Sbjct: 254 ACAFLGALDQGRWIHAYVDRNRMVLDRI-LGTALIDMYAKCGCVETACRVFDEMLDRDVF 312
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++ ++ISGLA +G +E++ +M +GV PN+ TF+ +L+ C+ GLVE+ +F SM
Sbjct: 313 AFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSM 372
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
T ++ I P ++HYGC+VD+LGR+G + +A ++R M + P++ + G+LL++CR HG VEL
Sbjct: 373 TNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVEL 432
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ V+ L + G +VLLSN+YA +W+D +R M E VKK PG SLIE
Sbjct: 433 GKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIE 489
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 189/515 (36%), Positives = 286/515 (55%), Gaps = 44/515 (8%)
Query: 3 RKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYAT-----K 55
+ IL LL+ + T + HL Q HA LR Q + I V ++ +Y + +
Sbjct: 33 KAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLR 92
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F+ +R P+V L+N MIK N + + L+ + P++YT+ +LKAC G
Sbjct: 93 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 152
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIH 174
+ G VH +++ G G I + +Y S G++ + ++ D+ D + N MI
Sbjct: 153 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMID 212
Query: 175 GFCKKGDVDKGLYLFREMRERSVVS-WNLMISSLGKSG--------------RDS----- 214
G+ + G+V+ LF M +RS++S WN MIS + G RD
Sbjct: 213 GYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSA 272
Query: 215 ------------EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
EAL +FH+M+ + + + +VL CA LGA+D G+WIH+YA+ +
Sbjct: 273 MIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNS 332
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ V +G +LVD Y KCG +D A VF+++ K V SWNAMI GLA +GR E ++L+
Sbjct: 333 IQLDGV-LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF 391
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
+M ++PN+ TFVGVL CAH GLV+K +F SM + + P +EHYGC+VD+LGR
Sbjct: 392 SKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGR 448
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
+G + EA ++ S+ P A+WG+LL +CR HG+VEL E K L+ LEP NSG Y LL
Sbjct: 449 AGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLL 508
Query: 443 SNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SNIYA+ GRW++ +R M+E +K +PG S+I+
Sbjct: 509 SNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 543
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 284/524 (54%), Gaps = 54/524 (10%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+ + L G H+ ++HA L+ LH + A VS L + + ++F+ +
Sbjct: 351 VEQHLASLPRGLPRAAHVRELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAI 410
Query: 61 RNP--SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
R+P L N+M++AY+L G + + F+ + D +T++ L+KA G V
Sbjct: 411 RDPHADAFLANTMLRAYALGGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAGVAPV 466
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI---------VR 169
+ VH +++ G + +++ Y+ G D KVFDEM RDV+ VR
Sbjct: 467 -RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR 525
Query: 170 ----------------------NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
N ++ G+ K G+V+ LF+ M ER+VVSW+ M+S
Sbjct: 526 EGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGY 585
Query: 208 GKSGRDSEALRLFHE-------------MRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
K G D E R+ + M++ + ELD A VV++L CA G++ +G+ I
Sbjct: 586 CKKG-DLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRI 644
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMISGLAFNG 313
H Y L R V NAL+D +CKCG ++ A VF E +K+ VSWN++I G A +G
Sbjct: 645 HRYVRKRNLGRST-HVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHG 703
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G+ +EL+ QM +G +P+ T + VL+ C H G V++ R F++M + I+P +EHY
Sbjct: 704 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHY 763
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GCM+D+LGR G ++EA DLI+SM PN IWGSLLS+CR H +VE AE AV EL L+P
Sbjct: 764 GCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQP 823
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
N+GNY +LSNIYAE G+W D RM M+ +K+ G S +E
Sbjct: 824 SNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVE 867
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 272/461 (59%), Gaps = 7/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++HA +R S + L F CG + + ++F++MR P ++L+ +I+AY
Sbjct: 112 EVHASVVRTGFACSEFVSGALLGFYVACGLVGK---GRQVFDEMRQPGLVLWTLIIRAYV 168
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
E+ ++LF ++ +G+ PD + ++ AC +GDL V + +H I +SG E
Sbjct: 169 CVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAF 228
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++ Y CG +D + F E ++++V N MIH + +++ G LF+ M +R
Sbjct: 229 VSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD 288
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VVSWN MI + G+ EAL FHEM + T+++ L CA GA+D G WIH+
Sbjct: 289 VVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHA 348
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + R S+ ++L+D Y KCG +D A +F+E R+++ +W +++ GLA +GRGE
Sbjct: 349 YVDKNDMNRDG-SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGE 407
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ + +M V P+ T VGVL+ CAHAGL+++ F SM + +VP +EHYGCM
Sbjct: 408 KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCM 467
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR GC++EAYDLI M + N IWG+ LS+CR H +VEL E A + L+ L+P +
Sbjct: 468 VDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDP 527
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSN+YAE +WD + LR +++ +KKSPG S IE
Sbjct: 528 WARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIE 568
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 182/445 (40%), Gaps = 71/445 (15%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L+ F H L N + + T+ + A+++ +V ++N+MI+
Sbjct: 10 QLSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRL----DCANVFVWNTMIRKQV 65
Query: 77 LNGPSEEPVKLFALLKNL--GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
NG L ++ L G+ P+ +TF LLKA + +++ G+ VH ++R+GF
Sbjct: 66 ENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACS 125
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ ++ Y +CG + G +VFDEM +++ L+I + +K L LFR MRE
Sbjct: 126 EFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMRE 185
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ D + V+ C LG + + + +
Sbjct: 186 VGLTP-------------------------------DMVAISTVVSACGLLGDLGVAKAM 214
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN---------------- 298
H + E SG+ V + L+ Y +CG LD A F+E P KN
Sbjct: 215 HCFIEKSGIEVDAF-VSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNN 273
Query: 299 ---------------VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
VVSWN+MI G A G+ + + + +M GVSPN T + L+
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CA G ++ + A + + + + ++D+ + G + +A + S R +
Sbjct: 334 CASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLF 391
Query: 404 IWGSLLSSCRTHGHVELAEHAVKEL 428
W S++ HG E A H ++
Sbjct: 392 TWTSIVCGLAMHGRGEKALHYFSKM 416
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/537 (35%), Positives = 284/537 (52%), Gaps = 61/537 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+ + L HG H+ ++HA L+H LH L + +S + + +IF
Sbjct: 57 VEQHLASLPHGLQHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASF 116
Query: 61 RNPSVLLF--NSMIKAYSLNGPSEEPVKLFA------------LLKNL---GIWP----- 98
NP F N++++AY+LN V LF+ L+K L G+ P
Sbjct: 117 PNPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQRDSFTYSFLIKALSSSGLTPLRAVH 176
Query: 99 ----------DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS-----IRIG--- 140
D Y L+ A G V E+ R + S +R G
Sbjct: 177 SHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVA 236
Query: 141 -------------------VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
V++ YT G+M+D ++F M R+V+ + ++ G+CKKGD
Sbjct: 237 SARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGD 296
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F +M +++V+W +M+S+ ++G EA RLF +M++ A ELD A VV++L
Sbjct: 297 IEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAA 356
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVV 300
CA G++ +G+ IH Y + L R V NA++D +CKCG ++ A VF EI K+ V
Sbjct: 357 CAESGSLALGKRIHRYVRTRQLGRST-HVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSV 415
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN +I G A +G G+ ++ + QM +G P+ T + VL+ C H G VE+ R+ F++M
Sbjct: 416 SWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNM 475
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ IVP +EHYGCM+D+LGR G + EA LI+SM PN IWGSLLS+CR H +VE
Sbjct: 476 ERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEY 535
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE AV EL L+P N+GNY +LSNIYAE G+W D RM M+ +KS G S IE
Sbjct: 536 AEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIE 592
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 268/488 (54%), Gaps = 64/488 (13%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A K+F+Q+ P+ ++N+M + YS N ++ + LF +K L + P+ +TF +LK+C+
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 113 VGDLRVGQCVH------------------------GEIIRSGFERFGSI-------RIGV 141
+ L+ G+ VH G I + + FG + +
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI---------------------------- 173
+ Y +C + ++FD RD+++ N MI
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWN 183
Query: 174 ---HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR-DQAFE 229
+G+ GDV LF EM ER+V SWN +I ++G SE L F M D
Sbjct: 184 TVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVV 243
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
++AT+V VL CARLGA+D+G+W+H YAES G Y+ V V NAL+D Y KCG+++TA +
Sbjct: 244 PNDATLVNVLSACARLGALDLGKWVHVYAESHG-YKGNVYVRNALMDMYAKCGVVETALD 302
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VFK + K+++SWN +I GLA +G G + L+ M G +P+ TF+G+L C H GL
Sbjct: 303 VFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGL 362
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
VE F SMT +SIVP +EHYGC+VD+LGR+G + A D IR M I +A IW +LL
Sbjct: 363 VEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALL 422
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+CR + +VELAE A+++LI EP N NYV+LSNIY + GRW D L++ MR+ KK
Sbjct: 423 GACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKK 482
Query: 470 SPGQSLIE 477
PG SLIE
Sbjct: 483 LPGCSLIE 490
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 128/329 (38%), Gaps = 64/329 (19%)
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE--------------RS 196
M++ KVFD++ + + N M G+ + + LFR+M+ +S
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 197 VVSWN-------------------------LMISSLGKSGRDSEALRLFHEMRDQAFELD 231
V N +I G A R+F EM ++
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 232 EATVVAVLPICARLGA---------VDIGQW---IHSYAESSGLYR----------KVVS 269
A + + C + A DI W I Y E+ + R K V
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
N +++ Y G + +F+E+P +NV SWNA+I G NG + +++M+ G
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDG 240
Query: 330 -VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
V PN AT V VL+ CA G ++ + + H N+ ++D+ + G V
Sbjct: 241 TVVPNDATLVNVLSACARLGALDLGKWVHVYAES-HGYKGNVYVRNALMDMYAKCGVVET 299
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
A D+ +SM + + W +++ HGH
Sbjct: 300 ALDVFKSMDNK-DLISWNTIIGGLAVHGH 327
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 31/224 (13%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
+H + ++ N ++ + CG ++ A +F M N ++ +N++I +++G
Sbjct: 273 ESHGYKGNVYVRNALMDMYAK-CGV---VETALDVFKSMDNKDLISWNTIIGGLAVHGHG 328
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI---- 137
+ + LF+ +K G PD TF +L AC +G ++ GF F S+
Sbjct: 329 ADALNLFSHMKIAGENPDGITFIGILCACTHMG-----------LVEDGFSYFKSMTDDY 377
Query: 138 ----RIG----VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD----VDKG 185
RI +V+L G + + +M V + G C+ +
Sbjct: 378 SIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELA 437
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
L E ++ ++ ++ + G GR + RL MRD F+
Sbjct: 438 LEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFK 481
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 275/480 (57%), Gaps = 36/480 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS--VCGTLNEIKYATKIFNQ 59
E +++ L+ + +THL QIHAH +R L Q++ I F+S ++ Y++++F+Q
Sbjct: 68 ENQLISLIKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQ 127
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ PS +N MI+AYS++ E+ L+ ++ G+ P+ + + ++K+C+ + L G
Sbjct: 128 IMKPSGSQYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGG 187
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+H I+R G + + +++LY+ C + ++ KVFDE+ D
Sbjct: 188 LQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDT------------- 234
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA--FELDEATVVA 237
VSWN++IS + R +ALR+F M+ A FE D+ T +
Sbjct: 235 ------------------VSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLL 276
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+L CA LGA++ G+ +H+Y E G Y +++ N+L+ Y +CG L+ A ++FK + +
Sbjct: 277 LLQACANLGALEFGERVHNYIEEHG-YDGALNLCNSLITMYSRCGRLEKAYSIFKRMDER 335
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
NVVSW+AMISG A +G G +E +EQM GVSP+ T GVL+ C+H GLV+ F
Sbjct: 336 NVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFF 395
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
M+ + I PN+ HYGCMVD+LGR+G + +AY LI SM I+P++ +W +LL +CR H H
Sbjct: 396 DRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRH 455
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E + LI L+ +G+YVLL NIY+ G WD LR +M+E ++ SPG S IE
Sbjct: 456 ATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIE 515
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 269/477 (56%), Gaps = 6/477 (1%)
Query: 6 LRLLHGRN-TRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNP 63
L LLH R + HL Q+HA ++ L + + + V+ C G ++ YA ++ P
Sbjct: 37 LTLLHTRCVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHPRP 96
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ ++N++I+A S + V LF + + PD +F LL A +G G+ +H
Sbjct: 97 NSFMWNTVIRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGEALH 156
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G ++ G +R + +Y SCG+ D+ + +F + DV+ N +I + G VD
Sbjct: 157 GMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALARAGRVD 216
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ +F M ER+V +W+ M+S+ ++ R SEAL LF M+ E + +V+VL CA
Sbjct: 217 EARSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLGCCA 276
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV--- 300
LGA+ G W+H Y + G+ + V ALVD YCKCG +D AR VF + +
Sbjct: 277 SLGALVQGAWVHEYIDRHGVAMNALVV-TALVDMYCKCGSVDDARQVFDAARSQGLAKLS 335
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+M+ GLA +G+ V L+ ++ + G+SP+ TF+ VLT H+G+ ++A+ FASM
Sbjct: 336 SWNSMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASM 395
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ H + P +EHYGC+VD L R+G +REA D IR+M + P+AAIWG+LLS CR HG EL
Sbjct: 396 SSEHGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDAEL 455
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +E + +P +SG YVL +++ A GG +R MRE V K PG S+IE
Sbjct: 456 GARAAREAVRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIE 512
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/483 (36%), Positives = 289/483 (59%), Gaps = 19/483 (3%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
T L Q+HA ++ + L A + S ++ YA KIF M P+ +N+
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81
Query: 71 MIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+I+A S N P + + ++++ + P+ +TF + KAC LR G+ VHG ++
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 141
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVF---------DEMSHR------DVIVRNLMIH 174
G + + VV +Y SCG M+D ++F D + + DV++ N+MI
Sbjct: 142 GLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 201
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+ + G+++ LF EM +RSVVSWN+MI+ +SG EA+ +F EM+ + T
Sbjct: 202 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVT 261
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+V+VLP +RLGA+++G+W+H YA + + V +G+AL+D Y KCG ++ A VF+ +
Sbjct: 262 LVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV-LGSALIDMYAKCGSIEKALQVFEGL 320
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
P++NVV+W+ +I+GLA +GR + ++ +E M GV P+ T++G+L+ C+HAGLV + R
Sbjct: 321 PKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGR 380
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F M + + P +EHYGCMVD+LGR+G + E+ +LI +M I+P+ IW +LL +C+
Sbjct: 381 WFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKM 440
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG+VE+ + + L+ L P +SG+YV LSNIYA G W+ +R+ M+E +V+K PG S
Sbjct: 441 HGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCS 500
Query: 475 LIE 477
IE
Sbjct: 501 WIE 503
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 261/457 (57%), Gaps = 32/457 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+ A+ ++ L +L+ + + + ++ A +F+ V+++N+++ AY NG
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E V++F + +G+ DE T ++ AC +GD ++G+ V G + G R +
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG+ + K LF M+ R VV+W
Sbjct: 262 LMDMYAKCGE-------------------------------IGKARRLFDGMQSRDVVAW 290
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+ MIS ++ + EAL LF EM+ E ++ T+V+VL CA LGA++ G+W+HSY
Sbjct: 291 SAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRR 350
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
L + +G ALVDFY KCG +D A F+ +P KN +W A+I G+A NGRG +E
Sbjct: 351 KRLSLTTI-LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALE 409
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ M G+ P TF+GVL C+H+ LVE+ R F SM + I P +EHYGCMVD+L
Sbjct: 410 LFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLL 469
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+G V EAY IR+M I PNA IW +LLSSC H +V + E A+K++I+L P +SG+YV
Sbjct: 470 GRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYV 529
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNIYA G+W DA +R M++ ++K+PG SLIE
Sbjct: 530 LLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIE 566
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 277/481 (57%), Gaps = 5/481 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS--VCGTLNEIKYATKIFN 58
++ + ++ T L QIH L + L ++ FV+ N + Y+ ++ +
Sbjct: 8 VKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLD 67
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLG-IWPDEYTFAPLLKACLGVGDL 116
+NP++ FNSMI+A+S + ++ +L + G + PD YTF L++ +
Sbjct: 68 NSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAH 127
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G VHG ++ GFE ++ G++ +Y G +D +VF + D++ + M+
Sbjct: 128 GTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSAC 187
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K GDV LF +M + ++WN MIS + G+ EAL LF+ M+ + +++E ++V
Sbjct: 188 AKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMV 247
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+VL C+ LGA+D G+W H+Y E + L R +++G AL+D Y KCG ++ A VF +
Sbjct: 248 SVLSACSHLGALDQGRWAHAYIERNKL-RMTLTLGTALIDMYAKCGNMNKAMEVFWGMKE 306
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
KNV +W++ I GLA NG GE +EL+ M V PN+ TFV VL C+ GLVE+ R+
Sbjct: 307 KNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKH 366
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SM+ ++ I P LEHYGCMVD+ GR+G + EA + I SM +RP+ WG+LL++C+ +
Sbjct: 367 FESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYR 426
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++E+ E A ++++ LE N G YVLLSNIYA+ WD +R M V+K PG S+I
Sbjct: 427 NMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVI 486
Query: 477 E 477
E
Sbjct: 487 E 487
>gi|357155797|ref|XP_003577241.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Brachypodium distachyon]
Length = 519
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 179/417 (42%), Positives = 254/417 (60%), Gaps = 17/417 (4%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+ +K+ S P ++ + L+ + PD +F PLL + R+ +H ++R
Sbjct: 107 NAAVKSLSATSPPAA-FRMLSSLRRIHS-PDRLSFLPLLGSSTSP---RLHSALHALLLR 161
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH--RDVIVRNLMIHGFCKKGDVDKGL 186
GF +I + +++ Y + +FDEM R + N +I + D+
Sbjct: 162 LGFLSHHAIALALLKPY----HLPHARTLFDEMPQKIRCAVSYNTLITACFRTRDILAAR 217
Query: 187 YLFREMRE-----RSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLP 240
LF EM+ RSVVSWN MI+ + GRD A+R F +M R+ D+ T+ A LP
Sbjct: 218 RLFDEMQRHNRSRRSVVSWNAMIAGCARCGRDDMAVRYFEDMVREGEVAPDDGTLAAALP 277
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C R G G+W H YA +GL V V NA++D YCKCG + +AR VF+ + ++ VV
Sbjct: 278 ACGRTGNAGAGRWAHEYAREAGLLDGSVHVVNAVIDMYCKCGDVGSAREVFERMRQRTVV 337
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN MISG + NG+G G++L+ +M+ G +P+ TF+GVL CCAHAG +E+F SM
Sbjct: 338 SWNTMISGFSLNGQGVEGIDLFREMMRSGENPDAVTFLGVLGCCAHAGAANVGQEIFQSM 397
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I +EHYGCMVDVLGRSG + EA+ LI+ M +RPNAAIWG+LLS+CR H + +
Sbjct: 398 QSEYGIEAGVEHYGCMVDVLGRSGLLEEAHALIQGMPMRPNAAIWGALLSACRAHAGLSI 457
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE A+KELI+LEP+NSGNYVLL+N+YAE GRW++A +R MR + KK+PGQS IE
Sbjct: 458 AEVALKELIDLEPFNSGNYVLLANLYAETGRWEEAGDVRKLMRRMSAKKAPGQSSIE 514
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A L +H N ++ + CG ++ A ++F +MR +V+ +N+MI +SLNG
Sbjct: 298 AGLLDGSVHVVNAVIDMYCK-CG---DVGSAREVFERMRQRTVVSWNTMISGFSLNGQGV 353
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSI 137
E + LF + G PD TF +L C G VGQ + + I +G E +G +
Sbjct: 354 EGIDLFREMMRSGENPDAVTFLGVLGCCAHAGAANVGQEIFQSMQSEYGIEAGVEHYGCM 413
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHR 164
V++ G +++ + M R
Sbjct: 414 ----VDVLGRSGLLEEAHALIQGMPMR 436
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/474 (37%), Positives = 272/474 (57%), Gaps = 34/474 (7%)
Query: 35 LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
LI A +++ GT+ YA ++F + P ++N+MI+ + + + L++ ++N
Sbjct: 16 LIYASSIAISGTM---AYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENG 72
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD-- 152
+ PD++TF +LKAC + +++G VHG + R GFE +R ++ + +CG +
Sbjct: 73 CVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVA 132
Query: 153 ----DG-------------------------MKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
DG ++FDEM +D++ N+MI G+ K+G+++
Sbjct: 133 RALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEME 192
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF E+ +R VV+WN MI+ G + +AL +F EMR DE T++++L C
Sbjct: 193 SARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACT 252
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LG +D GQ IH G V +GNAL+D Y KCG + A VF+ + K+V +WN
Sbjct: 253 DLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWN 312
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+++ GLAF+G E + L+ +M + P++ TFVGVL C+HAG VE+ R+ F M
Sbjct: 313 SVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDE 372
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
++I PN+ HYGCMVD+LGR+G + EA+D I +M I PNA +W +LL +CR HG+VEL
Sbjct: 373 YNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRR 432
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +L+ + SG+YVLLSNIYA G WD E +R M ++ V+K G SLIE
Sbjct: 433 ANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIE 486
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 182/482 (37%), Positives = 281/482 (58%), Gaps = 40/482 (8%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFN 58
+++ I LL +++ QIHA +RH + +N + ++ ++ + + YA +IF+
Sbjct: 39 LKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFS 98
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG---IWPDEYTFAPLLKACLGVGD 115
Q++NP++ +N+MI+ Y+ SE P+ L + + I PD +T+ LLKA + D
Sbjct: 99 QIQNPNIFTWNTMIRGYA---ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMD 155
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+R G+ VH IR+GFE V V+N ++H
Sbjct: 156 VREGEKVHSIAIRNGFESL-------------------------------VFVQNTLVHM 184
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ G + LF M ER++V+WN +I+ +GR +EAL LF EM + E D T+
Sbjct: 185 YAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTM 244
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V++L CA LGA+ +G+ H Y GL + GNAL+D Y KCG + A VF E+
Sbjct: 245 VSLLSACAELGALALGRRAHVYMVKVGLDGNL-HAGNALLDLYAKCGSIRQAHKVFDEME 303
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K+VVSW ++I GLA NG G+ +EL++++ KG+ P++ TFVGVL C+H G+V++ +
Sbjct: 304 EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD 363
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M + IVP +EHYGCMVD+LGR+G V++A++ I++M ++PNA +W +LL +C H
Sbjct: 364 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
GH+ L E A +L+ LEP +SG+YVLLSN+YA RW D +R M VKK+PG SL
Sbjct: 424 GHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSL 483
Query: 476 IE 477
+E
Sbjct: 484 VE 485
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/465 (36%), Positives = 272/465 (58%), Gaps = 8/465 (1%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
QIH + + + + V + + A + F+ M +++ +NS+I Y N
Sbjct: 171 VQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
GP+ + +++F + N GI PDE T A + AC + +R G +H +++ R +
Sbjct: 231 GPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYR-NDLV 289
Query: 139 IG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+G +V++Y C ++++ VFD M RDV+ M+ G+ K V +F M ER+
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VVSWN +I+ ++G + EA+RLF ++ ++ T +L CA L + +G+ H+
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 257 YAESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ G + K + VGN+L+D Y KCG+++ R VF+ + ++ VSWNAMI G A
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
NG G +E++ +M+ G P+ T +GVL+ C+HAGLVE+ R F SMT H +VP +
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD 529
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HY CMVD+LGR+GC+ EA +LI++M + P+A +WGSLL++C+ HG++ L ++ + L+ +
Sbjct: 530 HYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEI 589
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+P NSG YVLLSN+YAE GRW D +R MR+ V K PG S I
Sbjct: 590 DPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWI 634
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 179/371 (48%), Gaps = 9/371 (2%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D FA LL C+ + + VH II++ F I+ +V++Y CG ++D KVF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D M R+ N ++ K G +D+ L LF+ M ER SWN M+S + R EALR
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
+M + F L+E + + L CA L + IG IH S Y V +G+ALVD Y
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSR-YSLDVYMGSALVDMY 196
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KC ++ +A+ F ++ +N+VSWN++I+ NG +E++ +M+ G+ P++ T
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
V + CA + + ++ A + +L +VD+ + V EA + M +
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAE 456
R + S++S V+ A ++ N+ WN+ L Y + G ++A
Sbjct: 317 R-DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNA-----LIAGYTQNGENEEAV 370
Query: 457 TLRMWMRENNV 467
L + ++ ++
Sbjct: 371 RLFLLLKRESI 381
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 192/505 (38%), Gaps = 142/505 (28%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA ++ + I V V G ++ A K+F+ M+ + +N+++ A + G
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGA 100
Query: 81 SEEPVKLFALL--KNLGIWP-----------------------------DEYTFAPLLKA 109
+E + LF + ++ W +EY+F L A
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G+ DL +G +HG I +S + + +V++Y+ C + + FD+M R+++
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIV-- 218
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
SWN +I+ ++G +AL +F M + E
Sbjct: 219 -----------------------------SWNSLITCYEQNGPAGKALEVFVRMMNCGIE 249
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
DE T+ +V CA L A+ G IH+ YR + +GNALVD Y KC ++ AR
Sbjct: 250 PDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARL 309
Query: 290 VFKEIP-------------------------------RKNVVSWNAMISGLAFNGRGELG 318
VF +P +NVVSWNA+I+G NG E
Sbjct: 310 VFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEA 369
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAH-------------------------------- 346
V L+ + + + P TF +L CA+
Sbjct: 370 VRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG 429
Query: 347 ---------AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
GLVE R +F M ++ + M+ ++G EA ++ R M
Sbjct: 430 NSLIDMYMKCGLVEDGRLVFERMLERDNV-----SWNAMIVGYAQNGYGTEALEIFREML 484
Query: 398 I---RPNAAIWGSLLSSCRTHGHVE 419
+ RP+ +LS+C G VE
Sbjct: 485 VSGERPDHVTMIGVLSACSHAGLVE 509
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 266/497 (53%), Gaps = 38/497 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +H+ + L ++ + + +L ++ A K+F+++ +V++ N MI++Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG E VK+F + + PD YTF +LKAC G + +G+ +HG + G +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---- 193
G+V +Y CG + + V DEMS RDV+ N ++ G+ + D L + REM
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 194 ---------------------------------ERSVVSWNLMISSLGKSGRDSEALRLF 220
++S+VSWN+MI K+ EA+ L+
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M FE D ++ +VLP C A+ +G+ IH Y E L ++ + NAL+D Y K
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAK 356
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG L+ AR+VF+ + ++VVSW AMIS F+GRG V L+ ++ G+ P+ FV
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C+HAGL+E+ R F MT + I P LEH CMVD+LGR+G V+EAY I+ MS+ P
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
N +WG+LL +CR H ++ A +L L P SG YVLLSNIYA+ GRW++ +R
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 461 WMRENNVKKSPGQSLIE 477
M+ +KK+PG S +E
Sbjct: 537 IMKSKGLKKNPGASNVE 553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 167/387 (43%), Gaps = 66/387 (17%)
Query: 98 PDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P E F LL L D+R + VH II S+ + ++ Y S + K
Sbjct: 38 PQETVF--LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFDE+ R+VI+ N+MI + V+ G Y E
Sbjct: 96 VFDEIPERNVIIINVMIRSY-----VNNGFY--------------------------GEG 124
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+++F M D T VL C+ G + IG+ IH A GL + VGN LV
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL-SSTLFVGNGLVS 183
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG L AR V E+ R++VVSWN+++ G A N R + +E+ +M + +S + T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 337 FVGVLTCCAHAGL--VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
+L ++ V +++F M G S+V + M+ V ++ EA +L
Sbjct: 244 MASLLPAVSNTTTENVMYVKDMFFKM-GKKSLVS----WNVMIGVYMKNAMPVEAVELYS 298
Query: 395 SMS---IRPNAAIWGSLLSSC----------RTHGHVELAEHAVKELI-NLEPWNSGNYV 440
M P+A S+L +C + HG++E K+LI NL N+
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER-----KKLIPNLLLENA---- 349
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNV 467
L ++YA+ G + A + M+ +V
Sbjct: 350 -LIDMYAKCGCLEKARDVFENMKSRDV 375
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/421 (40%), Positives = 260/421 (61%), Gaps = 10/421 (2%)
Query: 66 LLFNSMIKAY-----SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
L+N++I+A+ GP+ P+ +F ++ G+ PD +TF LL++ L +G+
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +I+R G ++ ++ +Y+SCG + +VFDE+ D+ N +I+ + G
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---DQAFELDEATVVA 237
VD LF M ER+V+SW+ MI+ + G+ EAL LF EM+ +E T+
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSG 204
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PR 296
VL C RLGA++ G+W H+Y + G+ VV +G AL+D Y KCG ++ A VF + P
Sbjct: 205 VLAACGRLGALEHGKWAHAYIDKCGMPVDVV-LGTALIDMYAKCGSVEKATWVFSNLGPN 263
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+V++W+AMISGLA +G E V L+ +MI +GV PN TF+ V C H GLV + ++
Sbjct: 264 KDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY 323
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
MT +SI+P ++HYGCMVD+ GR+G ++EA+++++SM + P+ +WG+LLS R HG
Sbjct: 324 LRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+E E A+K+LI LEP NSG YVLLSN+YA+ GRW+D +R M +KK PG SLI
Sbjct: 384 DIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLI 443
Query: 477 E 477
E
Sbjct: 444 E 444
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 145/374 (38%), Gaps = 70/374 (18%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS--------- 70
+HA LR L + +S+ + + +A ++F+++ P + +NS
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAG 144
Query: 71 ----------------------MIKAYSLNGPSEEPVKLFALLKNLG---IWPDEYTFAP 105
MI Y G +E + LF ++ LG + P+E+T +
Sbjct: 145 LVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSG 204
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHR 164
+L AC +G L G+ H I + G + ++++Y CG ++ VF + ++
Sbjct: 205 VLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNK 264
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ + MI G L G E + LF +M
Sbjct: 265 DVMAWSAMISG-------------------------------LAMHGLAEECVGLFSKMI 293
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+Q + T +AV C G V G+ ++ E + + G +VD Y + G
Sbjct: 294 NQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYG-CMVDLYGRAGR 352
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A NV K +P +V+ W A++SG +G E EL + + + N +V +
Sbjct: 353 IKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE-TCELALKKLIELEPTNSGAYVLLSN 411
Query: 343 CCAHAGLVEKAREL 356
A G E R +
Sbjct: 412 VYAKRGRWEDVRHV 425
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 266/497 (53%), Gaps = 38/497 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +H+ + L ++ + + +L ++ A K+F+++ +V++ N MI++Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG E VK+F + + PD YTF +LKAC G + +G+ +HG + G +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---- 193
G+V +Y CG + + V DEMS RDV+ N ++ G+ + D L + REM
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 194 ---------------------------------ERSVVSWNLMISSLGKSGRDSEALRLF 220
++S+VSWN+MI K+ EA+ L+
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M FE D ++ +VLP C A+ +G+ IH Y E L ++ + NAL+D Y K
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAK 356
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG L+ AR+VF+ + ++VVSW AMIS F+GRG V L+ ++ G+ P+ FV
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C+HAGL+E+ R F MT + I P LEH CMVD+LGR+G V+EAY I+ MS+ P
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
N +WG+LL +CR H ++ A +L L P SG YVLLSNIYA+ GRW++ +R
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 461 WMRENNVKKSPGQSLIE 477
M+ +KK+PG S +E
Sbjct: 537 IMKSKGLKKNPGASNVE 553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 145/338 (42%), Gaps = 55/338 (16%)
Query: 98 PDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P E F LL L D+R + VH II S+ + ++ Y S + K
Sbjct: 38 PQETVF--LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFDE+ R+VI+ N+MI + V+ G Y E
Sbjct: 96 VFDEIPERNVIIINVMIRSY-----VNNGFY--------------------------GEG 124
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+++F M D T VL C+ G + IG+ IH A GL + VGN LV
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF-VGNGLVS 183
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG L AR V E+ R++VVSWN+++ G A N R + +E+ +M + +S + T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 337 FVGVLTCCAHAGL--VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
+L ++ V +++F M G S+V + M+ V ++ EA +L
Sbjct: 244 MASLLPAVSNTTTENVMYVKDMFFKM-GKKSLVS----WNVMIGVYMKNAMPVEAVELYS 298
Query: 395 SMS---IRPNAAIWGSLLSSC----------RTHGHVE 419
M P+A S+L +C + HG++E
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 287/542 (52%), Gaps = 67/542 (12%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS--VCGTLNEIKYATKIFN 58
++ +L LL T + + QIHA + L + + V TLN + YA +F
Sbjct: 10 LKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLN-VNYAELVFA 68
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ + N+M+K Y+ + E ++ +A ++ G+ D YT+ +LKAC + L
Sbjct: 69 QIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLE 128
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ---------------------------- 150
G V GE ++ GF + G++ +Y CG+
Sbjct: 129 GGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVW 188
Query: 151 ---MDDGMKVFDEMSHRDVIVRNLMIHGFCKK-GDVDKGLYLFREMRERSVVSWNLMISS 206
M++ +FDEM RDV+ ++MI G+ KK G+V++ F M R +VSWN MI
Sbjct: 189 CGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDG 248
Query: 207 LGKSG------------------------------RDS-EALRLFHEMRDQAFELDEATV 235
K G RDS EAL LF +M Q + D +V
Sbjct: 249 YAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSV 308
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V + C++LGA+D G+WIH Y + + + +V V ALVD Y KCG D AR +F +P
Sbjct: 309 VGAVSACSQLGALDQGRWIHLYMKRNRMLLDIV-VQTALVDMYLKCGSRDEARRIFNSMP 367
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+NVVSWN MI GL NG G+ +E + QM + + + F+GVL C+HA LV +
Sbjct: 368 ERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLH 427
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+F M G++ + P LEHYGC+VD+LGR+G + + ++I+SM ++PNAA+WGSLL +CR H
Sbjct: 428 IFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIH 487
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
+V LAE V+ L L+ +SG YVL+SNIYA+ G W+ +R M+E +KK G+S+
Sbjct: 488 QNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSV 547
Query: 476 IE 477
IE
Sbjct: 548 IE 549
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/542 (35%), Positives = 287/542 (52%), Gaps = 67/542 (12%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS--VCGTLNEIKYATKIFN 58
++ +L LL T + + QIHA + L + + V TLN + YA +F
Sbjct: 10 LKNPLLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLN-VNYAELVFA 68
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ P+ + N+M+K Y+ + E ++ +A ++ G+ D YT+ +LKAC + L
Sbjct: 69 QIHQPNSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLE 128
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ---------------------------- 150
G V GE ++ GF + G++ +Y CG+
Sbjct: 129 GGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVW 188
Query: 151 ---MDDGMKVFDEMSHRDVIVRNLMIHGFCKK-GDVDKGLYLFREMRERSVVSWNLMISS 206
M++ +FDEM RDV+ ++MI G+ KK G+V++ F M R +VSWN MI
Sbjct: 189 CGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDG 248
Query: 207 LGKSG------------------------------RDS-EALRLFHEMRDQAFELDEATV 235
K G RDS EAL LF +M Q + D +V
Sbjct: 249 YAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSV 308
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V + C++LGA+D G+WIH Y + + + +V V ALVD Y KCG D AR +F +P
Sbjct: 309 VGAVSACSQLGALDQGRWIHLYMKRNRMLLDIV-VQTALVDMYLKCGSXDEARXIFNSMP 367
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+NVVSWN MI GL NG G+ +E + QM + + + F+GVL C+HA LV +
Sbjct: 368 ERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLH 427
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+F M G++ + P LEHYGC+VD+LGR+G + + ++I+SM ++PNAA+WGSLL +CR H
Sbjct: 428 IFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIH 487
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
+V LAE V+ L L+ +SG YVL+SNIYA+ G W+ +R M+E +KK G+S+
Sbjct: 488 QNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSV 547
Query: 476 IE 477
IE
Sbjct: 548 IE 549
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 262/442 (59%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF S G L+ A +F+++ ++ +NSMI + G EE ++LF +K
Sbjct: 172 LIHFYSSLGDLDS---AYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENA 228
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ T +L AC DL G+ I R+G + + ++++Y CG ++D +
Sbjct: 229 RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARR 288
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD+M +D++ MI G+ K GD D +F M + +WN +ISS ++G+ EA
Sbjct: 289 LFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEA 348
Query: 217 LRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L +F E++ ++ + +E T+ + L CA+LGA+D+G WIH Y + G+ + + +L+
Sbjct: 349 LAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGI-KLNFHITTSLI 407
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y KCG L+ A VF + R++V W+AMI+GLA +G G ++L+ +M V PN
Sbjct: 408 DMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAV 467
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF +L C+H+GLV++ R F M ++ +VP +HY CMVD+LGR+GC+ EA +LI
Sbjct: 468 TFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEK 527
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I P+A++WG+LL +CR +G+VELAE A L+ + N G YVLLSNIYA+ G+WD
Sbjct: 528 MPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCV 587
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR M+ + ++K PG S IE
Sbjct: 588 SRLRQHMKVSGLEKEPGCSSIE 609
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 203/441 (46%), Gaps = 75/441 (17%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMI 72
+ HL Q+HAH LR L + C + + + YA K+F+Q+ P++ +N++I
Sbjct: 43 KKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLI 102
Query: 73 KAYSLNGPSEEPVK----LFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
+A++ S +P++ +L +P+ YTF ++KA V L GQ +HG +++
Sbjct: 103 RAFA---SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMK 159
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ F GS D+ + N +IH + GD+D +
Sbjct: 160 ASF---GS----------------------------DLFISNSLIHFYSSLGDLDSAYLV 188
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F ++ E+ +VSWN MIS + G EAL+LF M+ + + T+V VL CA+ +
Sbjct: 189 FSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDL 248
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL------------------------ 284
+ G+W Y E +G+ ++ + NA++D Y KCG L
Sbjct: 249 EFGRWACDYIERNGIDINLI-LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDG 307
Query: 285 -------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM-IAKGVSPNKAT 336
D AR VF +PR+++ +WNA+IS NG+ + + ++ ++ + K PN+ T
Sbjct: 308 YAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVT 367
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
L CA G ++ + + I N ++D+ + G + +A ++ S+
Sbjct: 368 LASTLAACAQLGAMDLGGWIHVYIKK-QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV 426
Query: 397 SIRPNAAIWGSLLSSCRTHGH 417
R + +W ++++ HGH
Sbjct: 427 E-RRDVFVWSAMIAGLAMHGH 446
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/498 (36%), Positives = 271/498 (54%), Gaps = 40/498 (8%)
Query: 18 LTQIHAHFL-RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L ++H+ L LH + + + E Y IF+++ + +V+ FN MI++Y
Sbjct: 54 LKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYV 113
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
NG ++ + +F + N G +PD YT+ +LKAC G+L VG +HG +++ G +
Sbjct: 114 NNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLY 173
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM---- 192
I G+V +Y C +D +V DEM RD++ N M+ G+ + G + L L REM
Sbjct: 174 IGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLK 233
Query: 193 ---------------------------------RERSVVSWNLMISSLGKSGRDSEALRL 219
+E+S++SWN+MI+ + +EA+ L
Sbjct: 234 LKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDL 293
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
+ +M+ E D ++ +VLP C L A +G+ IH Y E L R + + NAL+D Y
Sbjct: 294 YLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKL-RPNLLLENALIDMYA 352
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L AR VF ++ ++VVSW +MIS +G+G+ V L+++M G +P+ FV
Sbjct: 353 KCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVS 412
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL C+HAGLV++ R F ++ + I P +EHY CMVD+LGR+G + EAY L R M +
Sbjct: 413 VLAACSHAGLVDEGRYCF-NLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPME 471
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
PN +WGSLLS+CR + + +A A L L P SG YVLLSNIYA+ GRW D ET+R
Sbjct: 472 PNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVR 531
Query: 460 MWMRENNVKKSPGQSLIE 477
M +KK PG S +E
Sbjct: 532 SIMNSKGIKKIPGNSNVE 549
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 266/476 (55%), Gaps = 4/476 (0%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+ + R G + +HAH +R + ++ + + V+ + A + +
Sbjct: 27 KAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGECDT 86
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC-LGVGDLRVGQC 121
P + +N++I ++ G E F + G P T+ +L AC G D+ +G
Sbjct: 87 P--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQ 144
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG ++ SG + +V++Y C M KVFD M R V+ ++ G + G
Sbjct: 145 VHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQ 204
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
VD+ LF M ER VSW MI + R EAL +F EM+ DE T+V+V+
Sbjct: 205 VDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITA 264
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA+LGA+++G+W+ Y G+ VGNAL+D Y KCG ++ A +VFK + ++ +
Sbjct: 265 CAQLGALEMGEWVRVYMSRQGIKMDAF-VGNALIDMYSKCGSIERALDVFKGMHHRDKFT 323
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W A+I GLA NG E +E++ +MI +P++ TF+GVLT C HAGLV+K RE F SM
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++I PN+ HYGC++D+LGR+G + EA D I M + PN+ IWG+LL++CR HG+ E+
Sbjct: 384 EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIG 443
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E + L+ L+P NS Y+LLSNIYA+ RW+D LR + E +KK PG SLIE
Sbjct: 444 ELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIE 499
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 152/391 (38%), Gaps = 82/391 (20%)
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACL----GVGDLRVGQCVHGEIIRSGFERFGSI 137
E+ V +A + G PD YTF LLKA G G + VH ++R G R +
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V YT+ G + E +
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECD---------------------------------TP 87
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI--GQWIH 255
V+WN +IS + GR E+ F +M T V+VL C + G D+ G +H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGK-GTRDVLLGMQVH 146
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GIL 284
SG+ + V NALVD Y +C G +
Sbjct: 147 GRVVGSGVLPD-LRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQV 205
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
D AR++F +P ++ VSW AMI G + R +E++ +M VS ++ T V V+T C
Sbjct: 206 DEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITAC 265
Query: 345 AHAGLVEKAR--ELFASMTG--LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
A G +E ++ S G + + V N ++D+ + G + A D+ + M R
Sbjct: 266 AQLGALEMGEWVRVYMSRQGIKMDAFVGN-----ALIDMYSKCGSIERALDVFKGMHHR- 319
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+ W +++ +G+ E A +I +
Sbjct: 320 DKFTWTAIILGLAVNGYEEEAIEMFHRMIRV 350
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 192/518 (37%), Positives = 286/518 (55%), Gaps = 50/518 (9%)
Query: 3 RKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYAT-----K 55
+ IL LL+ + T + HL Q HA LR Q + I V ++ +Y + +
Sbjct: 34 KAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLR 93
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW---PDEYTFAPLLKACLG 112
+F+ +R P+V L+N MIK N EP K L + + P++YT+ +LKAC
Sbjct: 94 VFDFVRKPNVFLWNCMIKVCIENN---EPFKAILLYYEMVVAHSRPNKYTYPAVLKACSD 150
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNL 171
G + G VH +++ G G I + +Y S G++ + ++ D+ D + N
Sbjct: 151 SGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 210
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVS-WNLMISSLGKSG--------------RDS-- 214
MI G+ + G+V+ LF M +RS++S WN MIS + G RD
Sbjct: 211 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 270
Query: 215 ---------------EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
EAL +FH+M+ + + + +VL CA LGA+D G+WIH+YA+
Sbjct: 271 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + V +G +LVD Y KCG +D A VF+++ K V SWNAMI GLA +GR E +
Sbjct: 331 RNSIQLDGV-LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 389
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+ +M + PN+ TFVGVL CAH GLV+K +F SM + + P +EHYGC+VD+
Sbjct: 390 DLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 446
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + EA ++ S+ P A+WG+LL +CR HG+VEL E K L+ LEP NSG Y
Sbjct: 447 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRY 506
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNIYA+ GRW++ +R M+E +K +PG S+I+
Sbjct: 507 TLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIID 544
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 176/462 (38%), Positives = 268/462 (58%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLR----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+IH H L+ L SN ++ H ++CG L +A K+F+ M + ++ +N++I Y
Sbjct: 137 KIHVHALKLGFESYLFVSNALI-HMYAMCGQLG---FAQKMFDGMLDRDLVSWNTLICGY 192
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S +E ++LF + I D T ++ AC +GD + I + E
Sbjct: 193 SQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDV 252
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++++Y + VFD M R+++ N ++ G K G++ LF M +R
Sbjct: 253 YLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKR 312
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
V+SW MI+ ++ + S+A++LF EM + D+ TV +VL CA LG +D+G +H
Sbjct: 313 DVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVH 372
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y G+ + VGN+L+D YCKCG+++ A VF + K+ VSW ++ISGLA NG
Sbjct: 373 HYIRRHGVQADIY-VGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFA 431
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+ QM+ +GV P TFVG+L CAHAGLV K E F SM +H +VP ++HYGC
Sbjct: 432 NSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGC 491
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+VD+L RSG + +AY+ I+ M I P+ +W LLS+C+ HG+V LAE A K L+ L+P +
Sbjct: 492 VVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCD 551
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SGNYVLLSN YA RWDDA +R M +++V+K G S IE
Sbjct: 552 SGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIE 593
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 192/429 (44%), Gaps = 66/429 (15%)
Query: 20 QIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
++HAH +R +LH +++ + S + + A +FNQ+ P+++++N MI+ S +
Sbjct: 35 ELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQS 94
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E + ++ + + GI + T L KAC V D+ G+ +H ++ GFE + +
Sbjct: 95 DHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVS 154
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++ +Y CGQ+ K+FD M RD++
Sbjct: 155 NALIHMYAMCGQLGFAQKMFDGMLDRDLV------------------------------- 183
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN +I + + E LRLF M + D T+V ++ C+ LG + + Y
Sbjct: 184 SWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYI 243
Query: 259 ESSGLYRKVVSVGNALVDFY-------------------------------CKCGILDTA 287
+ + L V +GN L+D Y K G L A
Sbjct: 244 KENNLEIDVY-LGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAA 302
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
R +F +P+++V+SW +MI+G + + V+L+++M+A V P+K T VL+ CAH
Sbjct: 303 RKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHL 362
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G ++ + + H + ++ ++D+ + G V +A ++ M + + + W S
Sbjct: 363 GKLDVGWAVHHYIRR-HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVS-WTS 420
Query: 408 LLSSCRTHG 416
++S +G
Sbjct: 421 VISGLAVNG 429
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 109/253 (43%), Gaps = 43/253 (16%)
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+ D + +H++ + L+ + + + + L A VF +I +V WN MI
Sbjct: 29 STDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMI 88
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
GL+ + + +Y +M +G++ N T + + CA + R++ +H++
Sbjct: 89 RGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIH-----VHAL 143
Query: 367 VPNLEHYGCMVDVL-------GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
E Y + + L G+ G ++ +D + + + W +L+ G+ +
Sbjct: 144 KLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGM----LDRDLVSWNTLIC-----GYSQ 194
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEG-------------GRWDDAETLRMWMRENN 466
++ KE++ L + + +NI A+ G W+ A+++ +++ENN
Sbjct: 195 YNKY--KEVLRL-----FDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENN 247
Query: 467 VKKSP--GQSLIE 477
++ G +LI+
Sbjct: 248 LEIDVYLGNTLID 260
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 260/430 (60%), Gaps = 1/430 (0%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N+I A ++F++M S++ + +M+ Y G E ++LF ++ + PDE +L
Sbjct: 316 NKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVL 375
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
AC+ + D +G+ VH I+ G G + +++LY CG++D+ ++ F+++ +
Sbjct: 376 SACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAA 435
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N M+ GFC+ G VDK F ++ E+ +VSWN M+++ K +E+ +F +M+
Sbjct: 436 SWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSN 495
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ D+ T++++L CA++GA++ G W++ Y E + + + +G AL+D Y KCG ++ A
Sbjct: 496 VKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAM-LGTALIDMYGKCGCVEMA 554
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F +I KNV W AM++ A G+ ++LY +M +GV P+ TF+ +L C+H
Sbjct: 555 YEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHG 614
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLV++ + F + ++I+P + HYGCMVD+LGR G + E I M I P+ +IW S
Sbjct: 615 GLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSS 674
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
L+ +CR+H +VELAE A K+LI ++P N+G +VLLSNIYA+ GRWDD +R + E V
Sbjct: 675 LMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGV 734
Query: 468 KKSPGQSLIE 477
K PG ++IE
Sbjct: 735 PKQPGFTMIE 744
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 228/500 (45%), Gaps = 76/500 (15%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I+ LL + + IHAH + L I + ++ ++N + A +I + P
Sbjct: 38 IIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPE 97
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+++N++++ G +E ++ + + G+ D TF L+ AC D+++G VHG
Sbjct: 98 SIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHG 157
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I++ GF R S+ ++ LY+ CG++ + ++F++M+HRDVI N MI + V K
Sbjct: 158 RILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCY-----VLK 212
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
G+Y EAL LF EM DE T+V+++ CA+
Sbjct: 213 GMY--------------------------REALDLFDEMLVSGVLPDEITMVSLVSTCAK 246
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL-------------------- 284
L +++G+ +H Y + L+ + S+ N LVD Y KCG +
Sbjct: 247 LKDLEMGKRLHLYIVDNKLWIR-GSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLW 305
Query: 285 -------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
D AR +F ++ +++VSW M+SG G +EL++QM + V
Sbjct: 306 TTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVI 365
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ V VL+ C H + R + A + +V ++D+ + G + EA
Sbjct: 366 PDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLG-NALLDLYAKCGKLDEALR 424
Query: 392 LIRSMSIRPNAAIWGSLLSS-CRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAE 448
+ + +AA W S+L CR+ G V+ A ++ ++ WN+ + N Y +
Sbjct: 425 TFEQLPCK-SAASWNSMLDGFCRS-GGVDKARDFFNKIPEKDIVSWNT-----MVNAYVK 477
Query: 449 GGRWDDAETLRMWMRENNVK 468
++++ + M+ +NVK
Sbjct: 478 HDLFNESFEIFCKMQSSNVK 497
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ + G ++ A +IF Q+ +V ++ +M+ AY++ G + E + L+ ++ G+ PD
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPD 600
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
TF LL A C HG ++ G++ F +R
Sbjct: 601 HVTFIALLAA-----------CSHGGLVDEGYKYFNKLR 628
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 262/441 (59%), Gaps = 3/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF + G L K A ++F++ + V+ + +MI Y+ + SEE +++F L+ +
Sbjct: 298 LIHFYAERGLL---KNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHV 354
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+E T ++ AC +G+L +G+ VH ++ S+ ++++Y C + D +
Sbjct: 355 EPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARE 414
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD M+ +DV M++G+ K GD++ F + ++ V W+ MI+ ++ + E+
Sbjct: 415 LFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKES 474
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L+LFHEM ++ E T+V+VL C +L +++G WIH Y + V++ NA+VD
Sbjct: 475 LKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVD 534
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +D A VF +P +N++SWN MI+G A NGR + + +++QM G PN T
Sbjct: 535 MYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNIT 594
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FV +LT C+H GL+ + RE F +M + I P HY CMVD+LGR+G + EAY LI +M
Sbjct: 595 FVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANM 654
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
++P A WG+LL++CR HG+VELA + L+ L+P +SG YVLL+N A +W D
Sbjct: 655 PMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVR 714
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M++ VKK PG SLIE
Sbjct: 715 RVRSLMKDKGVKKIPGYSLIE 735
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 199/485 (41%), Gaps = 104/485 (21%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFN 58
I L ++ +T L QI A + ++ ++ C + ++ YA IFN
Sbjct: 156 ITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFN 215
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
++ P+ ++N+MI+ Y F + L + D +F LKAC +
Sbjct: 216 RVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFE 275
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ V+ + + GF+ +R G++ Y G + + +VFDE S +DV
Sbjct: 276 GESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV------------ 323
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
V+W MI EA+ +F M E +E T++AV
Sbjct: 324 -------------------VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAV 364
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF--------------------- 277
+ C+ +G +++G+ +H E + R +S+ NAL+D
Sbjct: 365 VSACSDMGNLEMGKRVHEKVEEKNM-RCSLSLHNALLDMYVKCDCLVDARELFDRMATKD 423
Query: 278 ----------YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
Y KCG L++AR F + PRKN V W+AMI+G + N + + ++L+ +M+
Sbjct: 424 VYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMME 483
Query: 328 KGVSPNKATFVGVLTCC------------------------------------AHAGLVE 351
+GV P + T V VL+ C A G ++
Sbjct: 484 RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSID 543
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
A E+F++M + I N G + GR+ +D +R+M PN + SLL++
Sbjct: 544 AATEVFSTMPERNLISWNTMIAGYAAN--GRAKQAINVFDQMRNMGFEPNNITFVSLLTA 601
Query: 412 CRTHG 416
C +HG
Sbjct: 602 C-SHG 605
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
Q+ M + ++H + R + GD+ +F + + + WN MI
Sbjct: 175 QIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQN 234
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
+ + A F M E+D + V L C + V G+ ++ G +++
Sbjct: 235 ARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELL- 293
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
V N L+ FY + G+L AR VF E K+VV+W MI G A + E +E++E M+
Sbjct: 294 VRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSH 353
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
V PN+ T + V++ C+ G +E + + + ++ +L + ++D+ + C+ +A
Sbjct: 354 VEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEE-KNMRCSLSLHNALLDMYVKCDCLVDA 412
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+L M+ + + W S+++ G +E A
Sbjct: 413 RELFDRMATK-DVYSWTSMVNGYAKCGDLESA 443
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 279/479 (58%), Gaps = 8/479 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNE----IKYATKIFN 58
L LL ++ + L IH LR L + + +++C T N+ + YA IF+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q++NP++ +FN +I+ +S + + + IWPD TF L+KA + + V
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H +I+R GF+ + +V +Y +CG + ++F +M RDV+ M+ G+CK
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G V+ +F EM R++ +W++MI+ K+ +A+ LF M+ + +E +V+V
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+ CA LGA++ G+ + Y S + ++ +G ALVD + +CG ++ A +VF+ +P +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+SW+++I GLA +G + + QMI+ G P TF VL+ C+H GLVEK E++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+M H I P LEHYGC+VD+LGR+G + EA + I M ++PNA I G+LL +C+ + +
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+AE LI ++P +SG YVLLSNIYA G+WD E+LR M+E VKK PG SLIE
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 271/478 (56%), Gaps = 2/478 (0%)
Query: 1 IERKILRLLH-GRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+ R I+ LLH R H+ IH H ++ + Q + + V +N I +A K+F
Sbjct: 25 LRRVIISLLHKNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRC 84
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+NP+V L+ S+I + G + + LF + + D Y +LKAC+ L G
Sbjct: 85 TQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSG 144
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VHG +++SG SI + +VELY CG ++D K+FD M RDV+ +MI
Sbjct: 145 KEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDC 204
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G V++ + +F EM R V W ++I L ++G + L +F EM+ + E +E T V VL
Sbjct: 205 GMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVL 264
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+LGA+++G+WIH+Y G+ G AL++ Y +CG +D A+ +F + K+V
Sbjct: 265 SACAQLGALELGRWIHAYMRKCGVEVNRFVAG-ALINMYSRCGDIDEAQALFDGVRVKDV 323
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
++N+MI GLA +G+ VEL+ +M+ + V PN TFVGVL C+H GLV+ E+F S
Sbjct: 324 STYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFES 383
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M +H I P +EHYGCMVD+LGR G + EA+D I M + + + SLLS+C+ H ++
Sbjct: 384 MEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIG 443
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ E K L +SG++++LSN YA GRW A +R M + + K PG S IE
Sbjct: 444 MGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIE 501
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 330 bits (847), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 270/476 (56%), Gaps = 28/476 (5%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+++I+ LL + IHA +R+ Q ++ + C + I YA++IF
Sbjct: 39 QKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 98
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+V L+ ++I + +G E ++L++ + + I PD Y A +LKAC LR G+
Sbjct: 99 NPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGRE 158
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH ++ GF +R+ ++ELY CG++ D +VF+EM DV+ ++
Sbjct: 159 VHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVAKD----------- 206
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V W MI ++ + AL F M+ + +E T+V VL
Sbjct: 207 ---------------TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSA 251
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C++LGA++IG+W+HSY + + VGNAL++ Y +CG +D A+ VF E+ ++V++
Sbjct: 252 CSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKDRDVIT 310
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+N MISGL+ NG+ +EL+ M+ + + P TFVGVL C+H GLV+ E+F SM
Sbjct: 311 YNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMA 370
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + P +EHYGCMVD+LGR G + EAYDLIR+M + P+ + G+LLS+C+ H ++EL
Sbjct: 371 RDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELG 430
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E KEL + +SG YVLLS++YA G+W +A +R M+E ++K PG S IE
Sbjct: 431 EQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 486
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 273/503 (54%), Gaps = 33/503 (6%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFN 58
+ L LL + + L QI + + L + + ++ C ++ Y T I
Sbjct: 49 LSNPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILF 108
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLR 117
RNP+ +N I+ + + E V L+ +L+ G PD YT+ L KAC + +R
Sbjct: 109 NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 168
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+G + G ++ GF+ + V+ L SCG +D K+FD+ RD++ N MI+G+C
Sbjct: 169 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC 228
Query: 178 -----------------------------KKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
+ G +D LF EM ++ VV WN MI
Sbjct: 229 GNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYV 288
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ R EAL LF+EM+ DE T+V+ L C++LGA+D+G WIH Y E L V
Sbjct: 289 HANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNV- 347
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
++G AL+D Y KCG + A VF+E+P +N ++W A+ISGLA +G + + +MI
Sbjct: 348 ALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDN 407
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
V P++ TF+G+L+ C H GLVE+ R+ F+ M+ ++ P L+HY CMVD+LGR+G + E
Sbjct: 408 SVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEE 467
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +LI+SM I +A +WG+L +CR HG+V + E A +L+ ++P +SG YVLL+N+Y E
Sbjct: 468 AEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGE 527
Query: 449 GGRWDDAETLRMWMRENNVKKSP 471
W +A R MR+ V+K+P
Sbjct: 528 AEMWKEAGKARKLMRQRGVEKTP 550
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 280/470 (59%), Gaps = 7/470 (1%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMI 72
T H QI+ H ++ L + + ++ C + + I YA K+F +M NP++ +N++I
Sbjct: 40 TINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTII 99
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+A+S + + + LF + I P T+ + KA +G G +HG +++ G +
Sbjct: 100 RAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQ 159
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFD----EMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
I ++ +Y + G M + +VFD E+ DV+ N MI G+ K G++D+ L
Sbjct: 160 NDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNL 219
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M R+ VSWN MIS ++G+ EAL LF++M+ + FE+ E T+V++L CA LGA+
Sbjct: 220 FDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGAL 279
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
G+W+H Y + + V+ V A++D YCKCG ++ A VF+ PR+ + WN++I G
Sbjct: 280 QHGKWVHDYIKRNHFELNVIVV-TAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIG 338
Query: 309 LAFNGRGELGVELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
LA NG E + ++ +K + P+ +F+GVLT C H G + KAR+ F M + I
Sbjct: 339 LAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIE 398
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P+++HY C+VDVLG++G + EA +LI+ M ++P+A IWGSLLSSCR H +V++A A +
Sbjct: 399 PSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQR 458
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L P ++ YVL+SN++A ++++A R+ M+EN +K PG S IE
Sbjct: 459 VYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIE 508
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 264/477 (55%), Gaps = 6/477 (1%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNP 63
L LLH R + HL Q+HA ++ L + + + V+ C G ++ YA ++ P
Sbjct: 36 LTLLHTRCASMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHPRP 95
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ ++N++I+A S E V LF + P+ T LL A +G G +H
Sbjct: 96 NSFMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTLPSLLAAYARLGRAGDGAALH 155
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G ++ G +R + +Y SC + D+ + +F + D + N I + G VD
Sbjct: 156 GMALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALARAGRVD 215
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ +F M ER+V +W+ M+S+ ++ R EAL LF M+ E + +V+VL CA
Sbjct: 216 EARAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCCA 275
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK---NVV 300
LGA+D G W+H+Y + G+ + V ALVD YCKCG +D AR VF + +
Sbjct: 276 SLGALDQGAWVHAYIDRHGVAMNALVV-TALVDMYCKCGSVDDARQVFDAARSQGSAKLS 334
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+M+ GLA +G+ V L+ ++ + G+SP+ TF+ VLT HAG+ ++A+ FASM
Sbjct: 335 SWNSMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASM 394
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
HS+ P +EHYGC+VD L R+G +REA D IRSM + P+AA+WG+LLS CR HG EL
Sbjct: 395 ATEHSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGDAEL 454
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +E + +P +SG YVL +++ A GG +R MRE V K PG S+IE
Sbjct: 455 GARAAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIE 511
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 274/485 (56%), Gaps = 15/485 (3%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRH-KLHQSN--LILAHFVSVCG--TLNEIKYATKIFNQMR 61
RL+ L + H L+ LH + ++ + VC YAT +F+ ++
Sbjct: 23 RLIEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHMIK 82
Query: 62 NPSVLLFNSMIKAY--SLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDL 116
NP + +N MI+AY +G K L K + I P+ TF LLK C D
Sbjct: 83 NPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDG 142
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
GQ +H ++I+ GF + + ++ LY + G + + KVFDEM DV+ N M+ G
Sbjct: 143 ATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGC 202
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---DQAFELDEA 233
+ G +D + LFR+M R++++WN +I+ L + G E+L LFHEM+ D + D+
Sbjct: 203 LRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKI 262
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T+ +VL CA+LGA+D G+W+H Y +G+ VV +G ALV+ Y KCG + A +F+E
Sbjct: 263 TIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVV-IGTALVNMYGKCGDVQKAFEIFEE 321
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+P K+ +W MIS A +G G + +M GV PN TFVG+L+ CAH+GLVE+
Sbjct: 322 MPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQG 381
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
R F M ++SI P + HY CMVD+L R+ E+ LIRSM ++P+ +WG+LL C+
Sbjct: 382 RWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQ 441
Query: 414 THGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-KKSPG 472
HG+VEL E V LI+LEP N YV +IYA+ G +D A+ +R M+E + KK PG
Sbjct: 442 MHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPG 501
Query: 473 QSLIE 477
S+IE
Sbjct: 502 CSMIE 506
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 265/434 (61%), Gaps = 4/434 (0%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG + ++ +IF++ + +++++N+++ Y +G + E + + + G PD+ T
Sbjct: 271 CGDMYAVR---EIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTM 327
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+ AC +GDL VG+ H + R+G ER +I ++++Y CG+ + KVFD MS+
Sbjct: 328 LSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSN 387
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ V+ N +I G + G+++ L +F EM E ++VSWN MI ++ ++ EA+ L EM
Sbjct: 388 KTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREM 447
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
++Q + D T+V + C LGA+D+ +WI++Y E + ++ + +G ALVD + +CG
Sbjct: 448 QNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDM-QLGTALVDMFSRCGD 506
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
A VF+ + +++V +W A I A G + +EL+++M+ + V + FV +LT
Sbjct: 507 PLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTA 566
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
+H G V++ R+LF +M +H + P + HYGCMVD+LGR+G + EA+DL++SM I+PN
Sbjct: 567 FSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDV 626
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWGS L++CR H +VE A +A +++ L P G +VLLSNIYA G+W+D +R+ M+
Sbjct: 627 IWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMK 686
Query: 464 ENNVKKSPGQSLIE 477
E +K G S IE
Sbjct: 687 EKGFQKVAGSSSIE 700
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 201/436 (46%), Gaps = 46/436 (10%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
L T L Q+H + L+ + N ++A V + GT + YA F + L+
Sbjct: 29 LQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQM-GTHESLNYALNAFKEDEGTKCSLY 87
Query: 69 --NSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
N++I+ Y+ +G +E + ++ ++ +GI PD +TF LL AC + G VHG
Sbjct: 88 TCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGV 147
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+++ G + D+ V N +IH + G VD G
Sbjct: 148 VVKMGLVK-------------------------------DLFVANSLIHFYAACGKVDLG 176
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F EM ER+VVSW +I+ EA+ LF EM + E + T+V + CA+L
Sbjct: 177 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKL 236
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+++G+ + + G+ + V NAL+D Y KCG + R +F E KN+V +N +
Sbjct: 237 KDLELGKKVCNLMTELGVKSNTLVV-NALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTI 295
Query: 306 ISGLAFNG-RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG--LVEKARELFASMTG 362
+S +G GE+ V L ++M+ KG P+K T + + CA G V K+ + G
Sbjct: 296 MSNYVQHGLAGEVLVVL-DEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNG 354
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
L + N+ + ++D+ + G A + SMS W SL++ G +ELA
Sbjct: 355 LERL-DNISN--AIIDMYMKCGKREAACKVFDSMS-NKTVVTWNSLIAGLVRDGELELAL 410
Query: 423 HAVKEL--INLEPWNS 436
E+ NL WN+
Sbjct: 411 RIFGEMPESNLVSWNT 426
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 219/490 (44%), Gaps = 79/490 (16%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H ++ L + + L HF + CG ++ K+F++M +V+ + S+I YS
Sbjct: 143 QVHGVVVKMGLVKDLFVANSLIHFYAACG---KVDLGRKVFDEMLERNVVSWTSLINGYS 199
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ ++E V LF + +G+ P+ T + AC + DL +G+ V + G +
Sbjct: 200 VVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTL 259
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG M ++FDE S +++++
Sbjct: 260 VVNALLDMYMKCGDMYAVREIFDEFSDKNLVM---------------------------- 291
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+N ++S+ + G E L + EM + D+ T+++ + CA+LG + +G+ H+
Sbjct: 292 ---YNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHA 348
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y +GL R + ++ NA++D Y KCG + A VF + K VV+WN++I+GL +G E
Sbjct: 349 YVFRNGLER-LDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELE 407
Query: 317 L-------------------------------GVELYEQMIAKGVSPNKATFVGVLTCCA 345
L ++L +M +G+ ++ T VG+ + C
Sbjct: 408 LALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACG 467
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+ G ++ A+ ++ + + I +++ +VD+ R G A + +M R +A W
Sbjct: 468 YLGALDLAKWIYTYIEK-NDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSA-W 525
Query: 406 GSLLSSCRTHGH----VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
+ + G+ +EL + +K+ + + + +V L ++ GG D L W
Sbjct: 526 TAAIRVKAVEGNAKGAIELFDEMLKQDVKADDF---VFVALLTAFSHGGYVDQGRQL-FW 581
Query: 462 MRENNVKKSP 471
E SP
Sbjct: 582 AMEKIHGVSP 591
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 275/477 (57%), Gaps = 23/477 (4%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+KI L H ++ + QIHA L+ LH+ + + ++ ++ A +FNQ+
Sbjct: 17 LEQKISDL-HRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQI 75
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++P VLL+N++I+A+ N +F +++ G+ D +T+ LLKAC G +RV +
Sbjct: 76 QDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVE 135
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H ++ + GF + +++ Y G++ + ++FDEM RD + N ++ G+ K G
Sbjct: 136 MIHAQVEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAG 195
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+++ LF +M R+VVSW+ M + L + D+ TV+++L
Sbjct: 196 EMNAAFELFEKMPARNVVSWSTMEAGL---------------------KFDDGTVISILS 234
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA G + +G+ +H+ E + ++ V NAL+D Y KCG L+ A ++F + RK+VV
Sbjct: 235 ACAVSGLLGLGKRVHASIERT-RFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVV 293
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNA+I GLA +G GE ++L+ +M +G P+K TFVGVL C HAG V++ F +M
Sbjct: 294 SWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAM 353
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ + P +EHYGCMVD+LGR G ++EA+ L+ SM + PNA IWG+LL +CR H L
Sbjct: 354 ERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGL 413
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE L+ E +SGN +LSNIYA G WD+ +R+ M+ +++K G S IE
Sbjct: 414 AEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIE 470
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/478 (37%), Positives = 281/478 (58%), Gaps = 16/478 (3%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV---SVCGTLNEIKYATKIFNQMRN 62
L+++HG RTHL I F+ +L L LA V + N + YA IF+Q++N
Sbjct: 28 LKIIHGFLLRTHL--ISDVFVASRL----LALALCVDDSTFHKPTNLLGYAYGIFSQIQN 81
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVG 119
P++ +FN +I+ +S EP K F + IWPD TF L+KA + + VG
Sbjct: 82 PNLFVFNVLIRCFSTGA---EPSKAFGFYTQMLKSRIWPDNITFPFLIKASTEMECVVVG 138
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ H +I+R GF+ + +V +Y +CG + ++F +M RDV+ M+ G+CK
Sbjct: 139 EQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKC 198
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G V+ +F EM R++ +W++MI+ K+ +A+ LF M+ + +E +V+V+
Sbjct: 199 GMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVI 258
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LGA++ G+ H Y S + ++ +G ALVD Y +CG ++ A VF+E+P K+
Sbjct: 259 SSCAHLGALEFGERAHEYVVKSHMTVNLI-LGTALVDMYWRCGEIEKAIRVFEELPDKDS 317
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW+++I GLA +G + + QM+ G SP T VL+ C+H GLV+K E++ +
Sbjct: 318 LSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYEN 377
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P LEHYGC+VD+LGR+G + EA + I M ++PNA I G+LL +C+ + + E
Sbjct: 378 MKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTE 437
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE LI ++P +SG YVLLSNIYA G+W+ E+LR M+E VKK PG SLIE
Sbjct: 438 VAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIE 495
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 263/467 (56%), Gaps = 4/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFN 69
+ + L QIHA L+ L Q + + F+S C + + + YA +F+ P L+N
Sbjct: 54 SKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWN 113
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
MI+ +S + E + L+ + + YTF LLKAC + L +H +I +
Sbjct: 114 LMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKL 173
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G+E ++ Y + G +FD + D + N +I G+ K G +D L LF
Sbjct: 174 GYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLF 233
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
R+M E++ +SW MIS ++G EAL+LFHEM++ E D ++ L CA+LGA++
Sbjct: 234 RKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 293
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+WIHSY + + V +G L+D Y KCG + A VFK I RK+V +W A+ISG
Sbjct: 294 QGKWIHSYLTKTRIRMDSV-LGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGY 352
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A++G G + + +M G+ PN TF VLT C++ GLVE+ + +F +M +++ P
Sbjct: 353 AYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPT 412
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+L R+G + EA I+ M ++PNA IWG+LL +CR H ++EL E + LI
Sbjct: 413 IEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 472
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++P++ G YV +NI+A G +WD A R M+E V K PG S I
Sbjct: 473 AIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTI 519
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 261/434 (60%), Gaps = 5/434 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG ++ K ++F++ + +++L+N+++ Y+ G + E + + + G PD T
Sbjct: 280 CGAIDAAK---RLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTM 336
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+ A + DL G+ HG +IR+G E + SI ++++Y CG+ + +VFD MS+
Sbjct: 337 LSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSN 396
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ V+ N + GF + GDV+ +F ++ ER+ V WN MIS L + +A+ LF EM
Sbjct: 397 KTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREM 456
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + + D T++ + C LGA ++ +W+H+Y E +G+ + + ALVD + +CG
Sbjct: 457 QGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCD-MRLNTALVDMFARCGD 515
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+A VF ++ ++V +W A I +A G GE L+ QM+ +GV P+ FV VLT
Sbjct: 516 PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTA 575
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H G VE+ +F+ M H I P +EHYGCMVD+LGR+G +REA+DLI+SM + PN
Sbjct: 576 CSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDV 634
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+WGSLL++CR H +VE+A +A + + L P +G +VLLSNIYA G+W D +R+ +R
Sbjct: 635 VWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLR 694
Query: 464 ENNVKKSPGQSLIE 477
E V+K PG S ++
Sbjct: 695 EKGVRKVPGSSSVQ 708
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 194/440 (44%), Gaps = 58/440 (13%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL---NEIKYATKIFNQMR-----NPSV 65
T L Q+H ++ L Q L V+ + + YA K F + + ++
Sbjct: 37 TLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDAL 96
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+ NS+I+ YS G E + L+ + LG+ P+ YTF +L C + G VHG
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+++ G E I+ ++ Y CG MD G KVF+ MS R+V+
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVV------------------ 198
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
SW +I + R EA+ LF EM + T+V V+ CA+L
Sbjct: 199 -------------SWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKL 245
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+D+G+ + +Y GL V V NALVD Y KCG +D A+ +F E +N+V +N +
Sbjct: 246 RDLDMGERVCAYIGELGLKLNKVMV-NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTI 304
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
+S A G + + ++M+ +G P++ T + ++ A A LV+ + + +
Sbjct: 305 LSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAIS--ASAQLVDL---FYGKVCHGYV 359
Query: 366 IVPNLEHYGCMVDVL-------GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
I LE + + +V+ G+ +DL+ + ++ W SL + +G V
Sbjct: 360 IRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV----VSWNSLTAGFIRNGDV 415
Query: 419 ELAEHAVKELI--NLEPWNS 436
E A ++ N WN+
Sbjct: 416 ESAWEVFNQIPERNAVFWNT 435
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 255/438 (58%), Gaps = 1/438 (0%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
V + A ++F+ M ++ + M+ +Y E + L +K + PD
Sbjct: 34 LVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPD 93
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+ A +L C LR G+ +H I S + ++ +Y SC M+ K++
Sbjct: 94 QVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYS 153
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
M +D++ M+ G+ K G ++ +F M E+ VVSW+ MIS+ ++ + SE L L
Sbjct: 154 GMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNL 213
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F++M+ DE T+++V+ CA +G++D +WIHS + G Y K++S+ NAL+D +
Sbjct: 214 FNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFY-KILSICNALIDMFS 272
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L A N+F +PRKNV++W +MI+ A +G G + L+ QM +GV PN TF+
Sbjct: 273 KCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLV 332
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C HAGLV + R LF M + I P EHYGCMVD++GR+ ++EA DLI SM IR
Sbjct: 333 LLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIR 392
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
PN AIWGSLL++C HG +EL E A K+++ L+P + G YVLLSNI+A+ G W++A+ LR
Sbjct: 393 PNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLR 452
Query: 460 MWMRENNVKKSPGQSLIE 477
+ M+ + V K G S +E
Sbjct: 453 VMMKVHGVSKETGYSWLE 470
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG+L A +FN M +V+ + SMI A++++G + LF +K G+
Sbjct: 267 LIDMFSKCGSLT---LALNMFNAMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGV 323
Query: 97 WPDEYTFAPLLKACLGVGDLRVG----QCVHGEI-IRSGFERFGSIRIGVVELYTSCGQM 151
P+ TF LL AC G + G +C+ E I E +G + V+L M
Sbjct: 324 EPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCM----VDLMGRAKLM 379
Query: 152 DDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ + + + M R +V + ++ GD++ G + +++ E
Sbjct: 380 QEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELGEFAAKKILE 423
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 174/489 (35%), Positives = 276/489 (56%), Gaps = 13/489 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQ 59
+ +L LL HL Q+ A + Q++ + C L+ + YA IF+
Sbjct: 54 LNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDH 113
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ +P+V L+ +MI AY+ + + L+ +++ WP+ + + +LK+C V
Sbjct: 114 VESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGS 173
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+ VH +++RSGFE++ ++ +++ Y ++ +FDEM+ R+V+ MI G+
Sbjct: 174 ARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYT 233
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-------RDQAFEL 230
+ G + + LF EM ER V SWN +I+ ++G EAL LF M Q
Sbjct: 234 RLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRP 293
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
++ T V L C G + +G+WIH Y +GL V NALVD Y KCG L AR V
Sbjct: 294 NQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSF-VSNALVDMYGKCGCLKEARRV 352
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA--KGVSPNKATFVGVLTCCAHAG 348
F +++ SWN+MI+ LA +G+ + + ++E+M+ GV P++ TF+G+L C H G
Sbjct: 353 FDRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGG 412
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVEK F MT + I P +EHYGC+VD+LGR+G EA +++R M I P+ IWGSL
Sbjct: 413 LVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSL 472
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L+ C+ HGH +LAE ++K+LI+++P N G ++L+NIY E G+WD+ +R ++E N
Sbjct: 473 LNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAH 532
Query: 469 KSPGQSLIE 477
K+PG S IE
Sbjct: 533 KTPGCSWIE 541
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 273/470 (58%), Gaps = 40/470 (8%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNS 70
+++ L QIHA +RH + +N + H + +L+ + YA +F + NP+V +N+
Sbjct: 29 SSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNT 88
Query: 71 MIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+I+ Y+ S+ P F + + + PD +T+ LLKA ++R G+ +H I
Sbjct: 89 IIRGYA---ESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTI 145
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R+GFE V V+N ++H + GD +
Sbjct: 146 RNGFESL-------------------------------VFVQNSLLHIYAACGDTESAYK 174
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+F M+ER +V+WN MI+ +GR +EAL LF EM + E D TVV++L A LGA
Sbjct: 175 VFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGA 234
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+++G+ +H Y GL K V N+L+D Y KCG + A+ VF E+ +N VSW ++I
Sbjct: 235 LELGRRVHVYLLKVGL-SKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIV 293
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
GLA NG GE +EL+++M +G+ P++ TFVGVL C+H G++++ E F M I+
Sbjct: 294 GLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGII 353
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMVD+L R+G V++AY+ I++M ++PNA IW +LL +C HGH+ L E A
Sbjct: 354 PRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSH 413
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+NLEP +SG+YVLLSN+YA RW D + +R M ++ VKK+PG SL+E
Sbjct: 414 LLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVE 463
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 283/537 (52%), Gaps = 61/537 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+ + L HG HL ++HA L+H LH + + +S + + +F
Sbjct: 23 VEQHLASLPHGLPRLHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASF 82
Query: 61 RNPSVLLF--NSMIKAYSLNGPSEEPVKLFA------------LLKNL---GIWP----- 98
NP F N++++AY+LN E V +F+ L+K L G+ P
Sbjct: 83 PNPHATTFLPNTLLRAYALNALPREAVAVFSAMPHRDSFTYSFLIKALSSAGVAPLRAVH 142
Query: 99 ----------DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS-----IRIGVVE 143
D Y L+ A G V E+ R + S +R G VE
Sbjct: 143 SHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVE 202
Query: 144 L----------------------YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
YT G +++ K+F M R+V+ + ++ G+CKKGD
Sbjct: 203 GARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGD 262
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F +M +++V+W +M+S+ ++G EA +LF +M++ + ELD A VV++L
Sbjct: 263 MEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAA 322
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVV 300
CA G++ +G+ IH Y + L R V NAL+D +CKCG ++ A VF EI K+ V
Sbjct: 323 CAESGSLALGKRIHRYVRTRQLGRST-HVCNALIDMFCKCGCINRADYVFDTEIVEKDSV 381
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN +I G A +G G+ ++ + QM +G P+ T + VL+ C H G VE+ R FA+M
Sbjct: 382 SWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANM 441
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ +VP +EHYGCM+D+LGR G ++EA DLI+SM PN IWGSLLS+CR H +VE
Sbjct: 442 ERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEY 501
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE AV EL L+P N+GNY +LS+IYAE G+W D RM M+ +KS G S IE
Sbjct: 502 AEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIE 558
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 263/457 (57%), Gaps = 32/457 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
I A+ ++ L +L+ + + + ++ A +F+ + V+++N++I AY NG
Sbjct: 141 IQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGN 200
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E V++F + +G+ DE T ++ AC +GD ++G+ V + G R ++
Sbjct: 201 WMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTA 260
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG++ K LF M+ R VV+W
Sbjct: 261 LIDMYAKCGELG-------------------------------KARRLFDGMQSRDVVAW 289
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+ MIS ++ + EAL LF EM+ E ++ T+V+VL CA LGA++ G+W+HSY
Sbjct: 290 SAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRR 349
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
L ++ +G ALVDFY KCG +D A F+ +P KN +W A+I G+A NGRG +E
Sbjct: 350 KRLSLTII-LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALE 408
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ M + P TF+GVL C+H+ LVE+ R F SMT + I P EHYGC+VD+L
Sbjct: 409 LFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLL 468
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+G + EAY IR+M I PNA IW +LLSSC H +VE+ E A+K++++L P +SG+Y+
Sbjct: 469 GRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYI 528
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNIYA G+W +A +R M++ ++K+PG SLIE
Sbjct: 529 LLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 270/461 (58%), Gaps = 7/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++HA +R S + L F CG + + ++F++MR P ++L+ +I+AY
Sbjct: 112 EVHASVVRTGFACSEFVSGALLGFYVACGLVGK---GRQVFDEMRQPGLVLWTLIIRAYV 168
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
E+ ++LF ++ +G+ PD + ++ AC +GDL V + +H I +SG E
Sbjct: 169 CVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAF 228
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++ Y CG +D + F E ++++V N MIH + +++ G LF+ M +R
Sbjct: 229 VSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD 288
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VVSWN MI + G+ EAL FHEM + T+++ L CA GA+D G WIH+
Sbjct: 289 VVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHA 348
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + R S+ ++L+D Y KCG +D A +F+E R+++ +W +++ GLA +GRGE
Sbjct: 349 YVDKNDMNRDG-SLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGE 407
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ + +M V P+ T VGVL+ CAHAGL+++ F SM + +VP +EHYG M
Sbjct: 408 KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXM 467
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR GC++EAYDLI M + N IWG+ LS+CR H +VEL E A + L+ L P +
Sbjct: 468 VDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDP 527
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSN+YAE +WD + LR +++ +KKSPG S IE
Sbjct: 528 WARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIE 568
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 71/445 (15%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L+ F H L N + + T+ + A+++ +V ++N+MI+
Sbjct: 10 QLSHTRFSFRLHPLTNPNKLPRIHGNTIATVEDPSAASRL----DCANVFVWNTMIRKQV 65
Query: 77 LNGPSEEPVKLFALLKNL--GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
NG L ++ L G+ P+ +TF LLKA + +++ G+ VH ++R+GF
Sbjct: 66 ENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACS 125
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ ++ Y +CG + G +VFDEM +++ L+I + +K L LFR MRE
Sbjct: 126 EFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMRE 185
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ D V V+ C LG + + + +
Sbjct: 186 VGLTP-------------------------------DMVAVSTVVSACGLLGDLGVAKAM 214
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN---------------- 298
H + E SG+ V + L+ Y +CG LD A F+E P KN
Sbjct: 215 HCFIEKSGIEVDAF-VSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNN 273
Query: 299 ---------------VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
VVSWN+MI G A G+ + + + +M GVSPN T + L+
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CA G ++ + A + + + + ++D+ + G + +A + S R +
Sbjct: 334 CASHGALDTGAWIHAYVDK-NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLF 391
Query: 404 IWGSLLSSCRTHGHVELAEHAVKEL 428
W S++ HG E A H ++
Sbjct: 392 TWTSIVCGLAMHGRGEKALHYFSKM 416
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 273/507 (53%), Gaps = 34/507 (6%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFNQMRN 62
K L L + L +IHA + + I V S + I YA +F +
Sbjct: 29 KTLSALQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINY 88
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P + +MI+ + E+ ++ + L++ G+ +++TF +LKA + G+ V
Sbjct: 89 PDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIV 148
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH-------- 174
HG++++ GF R ++ +Y CG + D +FDEM + +V+ N MI
Sbjct: 149 HGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDT 208
Query: 175 -----------------------GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
G+ K G VD LF M ER VVSW MIS+ ++G
Sbjct: 209 ERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNG 268
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
R +EAL LF EM D + ++L CA++GA+D+G+WIH+Y + S L R V +
Sbjct: 269 RAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKL-RNDVFLD 327
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
ALVD Y KCG +DTA VF +PRKN+ SWNAM+SGLA +G G +EL++QM + GV
Sbjct: 328 TALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVG 387
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN TFV VL+ C+H G VE+ + F M +I P +EHYGCMVD+L R G + EA +
Sbjct: 388 PNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKE 447
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+IR+M + PN IWG+LL++C+ HG+ + E V + L + G YVLLSNI+A +
Sbjct: 448 MIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQ 507
Query: 452 WDDAETLRMWMRENNV-KKSPGQSLIE 477
W++ E R M++ V KK PG S IE
Sbjct: 508 WNEVEKTRKMMKQMGVEKKIPGYSSIE 534
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 268/460 (58%), Gaps = 27/460 (5%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ+HA + + + + + + + A ++F+ M +++ +NS+I Y N
Sbjct: 167 TQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQN 226
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSI 137
GP+ E +++F + + G+ PDE T A ++ AC + L+ G +H ++++ F +
Sbjct: 227 GPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVL 286
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y C ++++ +VFD MS R+V+ M+ G+ + V ++F +M +R+V
Sbjct: 287 GNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV 346
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN +I+ ++G + EALRLF ++ ++ W Y
Sbjct: 347 VSWNALIAGYTQNGENEEALRLFRLLKRESI------------------------WPTHY 382
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
L + + VGN+L+D Y KCG ++ VF+++ ++ VSWNA+I G A NG G
Sbjct: 383 T-FGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAE 441
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
++++ +M+ G P+ T +GVL C+HAGLVE+ R F SM H ++P +HY CMV
Sbjct: 442 ALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMV 500
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+GC+ EA +LI +M + P+A +WGSLL++C+ HG++E+ +HA ++L+ ++PWNSG
Sbjct: 501 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSG 560
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN+YAE GRW D +R MR+ V K PG S IE
Sbjct: 561 PYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIE 600
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 178/366 (48%), Gaps = 11/366 (3%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
P+ FA LL +CL R + VH I+ + F I+ ++++Y C +DD K+
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FD M R+ N +I K G +D+ LF M E SWN M+S + R E+L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F +M + F L+E + + L CA L +++G +H+ S Y V +G+AL+D
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV-SKSRYSTDVYMGSALIDM 191
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG + A VF + +N+V+WN++I+ NG +E++ +M+ G+ P++ T
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
V++ CA +++ ++ A + + +L +VD+ + V EA + MS
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDA 455
IR N S++S V+ A ++ N+ WN+ L Y + G ++
Sbjct: 312 IR-NVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA-----LIAGYTQNG--ENE 363
Query: 456 ETLRMW 461
E LR++
Sbjct: 364 EALRLF 369
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 176/424 (41%), Gaps = 84/424 (19%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A ++F M P +NSM+ ++ + EE ++ F + +EY+F
Sbjct: 95 GFLDE---AARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFG 151
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L AC G+ DL +G VH + +S + + ++++Y+ CG + +VF M
Sbjct: 152 SALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM--- 208
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
I RNL V+WN +I+ ++G SEAL +F M
Sbjct: 209 --IERNL--------------------------VTWNSLITCYEQNGPASEALEVFVRMM 240
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D E DE T+ +V+ CA L A+ G IH+ + +R + +GNALVD Y KC +
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 285 DTARNV-------------------------------FKEIPRKNVVSWNAMISGLAFNG 313
+ AR V F ++ ++NVVSWNA+I+G NG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTC-----------CAHAGLVEKARELFASMTG 362
E + L+ + + + P TF +L G +E +F M
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKE 420
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI---RPNAAIWGSLLSSCRTHGHVE 419
+ + ++ ++G EA + R M + +P+ +L +C G VE
Sbjct: 421 RDCV-----SWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVE 475
Query: 420 LAEH 423
H
Sbjct: 476 EGRH 479
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 273/459 (59%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+++A + ++L+++ V + N I A ++F++ ++ L N+M Y G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + +F L+ + G+ PD + + +C + ++ G+ HG ++R+GFE + +I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y C + D ++FD MS++ V+ N ++ G+ + G+VD F M E+++VS
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN +IS L + EA+ +F M+ Q D T++++ C LGA+D+ +WI+ Y
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
E +G+ V +G LVD + +CG ++A ++F + ++V +W A I +A G E
Sbjct: 497 EKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL++ MI +G+ P+ FVG LT C+H GLV++ +E+F SM LH + P HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA LI M + PN IW SLL++CR G+VE+A +A +++ L P +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN+YA GRW+D +R+ M+E ++K PG S I+
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 34/304 (11%)
Query: 45 GTLNEIKYATKIF-NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
GT + +A ++F N + ++NS+I+ Y+ +G E + LF + N GI PD+YTF
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 137
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L AC G +HG I++ G+ + ++ +V Y CG++D KVFDEMS
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V VSW MI + +A+ LF M
Sbjct: 198 RNV-------------------------------VSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 224 -RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
RD+ + T+V V+ CA+L ++ G+ ++++ +SG+ + V +ALVD Y KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCN 285
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+D A+ +F E N+ NAM S G + ++ M+ GV P++ + + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 343 CCAH 346
C+
Sbjct: 346 SCSQ 349
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 43/345 (12%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIH ++ + + L HF + CG E+ A K+F++M +V+ + SMI Y+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECG---ELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 77 LNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+++ V LF ++++ + P+ T ++ AC + DL G+ V+ I SG E
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y C +D ++FDE ++ + N M + ++G L R
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG-------LTR----- 319
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
EAL +F+ M D D ++++ + C++L + G+ H
Sbjct: 320 -------------------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y +G + ++ NAL+D Y KC DTA +F + K VV+WN++++G NG
Sbjct: 361 GYVLRNG-FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+ E +E M K N ++ +++ L E+A E+F SM
Sbjct: 420 DAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N +I SG +EA+ LF M + D+ T L CA+ A G IH
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G Y K + V N+LV FY +CG LD+AR VF E+ +NVVSW +MI G A + V
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+L+ +M+ + V+PN T V V++ CA +E +++A
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/468 (36%), Positives = 265/468 (56%), Gaps = 6/468 (1%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK--YATKIFNQMRNPSVLLFNSM 71
T L QIH + + L + +L FV+ N Y+ +I +Q P++ NSM
Sbjct: 21 TLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSM 80
Query: 72 IKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
I+AYS + + + + L N + PD YTF L++ C G VHG +I+
Sbjct: 81 IRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTC-AQSACEAGPAVHGALIKH 139
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
GFE + G++ +Y + +VF+ + D++ + M+ K GD+ LF
Sbjct: 140 GFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLF 199
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
M +R VSWN MI+ + G+ EAL LF M+ +++E ++++V+ C LGA+D
Sbjct: 200 DSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALD 259
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+W H+Y E + + + V++G ALVD Y KCG +D A VF E+ KNV +W+ I GL
Sbjct: 260 QGKWAHAYIEKNKI-QMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGL 318
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A NG G+ +EL+ M +G++PN+ TF+ VL C+ G V++ R F SM H I P
Sbjct: 319 AMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPR 378
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
LEHYGCMVD+ GR+G + EA + I +M ++P+A WG+LL++CR + ++EL E A ++LI
Sbjct: 379 LEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLI 438
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+E N G YV LSNIYA+ G WD +R M+ + K PG S++E
Sbjct: 439 EVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVME 486
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 170/422 (40%), Positives = 254/422 (60%), Gaps = 12/422 (2%)
Query: 63 PSVLLFNSMIKAYSLN---GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
P+V LFN+ I+ +S G V LF + L + P+ +TF L + C +G
Sbjct: 52 PTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLG 111
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ HG +I++ FE +R ++ Y+ CG+++D VFDE S DV+ N MI G +
Sbjct: 112 RQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRN 171
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G++ + L LF +M ER+ +SWN+MIS ++G+ EAL LF EM+ E + A +V+VL
Sbjct: 172 GNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVL 231
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGN----ALVDFYCKCGILDTARNVFKEIP 295
C++LGA+D G W+H Y + +K V V + AL+D Y KCG +D A F
Sbjct: 232 SACSQLGALDHGCWVHCY-----IGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSR 286
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+++V ++ A ISGLA NG E ++L+EQM +G+SP+ +++ VL C+HAG VEK
Sbjct: 287 KRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFH 346
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
FASM+ +H I P L+HY CMVD+LGR+G + EA + SM I+P+ IWG+LL +CR +
Sbjct: 347 YFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVY 406
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+ E+ + L+ + + G Y+LLSNIYAE + +DAE +R MR V + PG SL
Sbjct: 407 GNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSL 466
Query: 476 IE 477
IE
Sbjct: 467 IE 468
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 125/336 (37%), Gaps = 73/336 (21%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA-- 74
Q H +++ + + F SVCG LN+ ++ +F++ V+ +NSMI
Sbjct: 113 QFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARW---VFDESSELDVVSWNSMIDGCI 169
Query: 75 -----------------------------YSLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
Y+ NG +E + LF ++ L P+
Sbjct: 170 RNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVS 229
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L AC +G L G VH I + + ++++Y CG +D M+ F RD
Sbjct: 230 VLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRD 289
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V I G G ++ L+LF +M+
Sbjct: 290 VSAYTAAISGLAMNGCSEEA-------------------------------LQLFEQMKG 318
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGI 283
+ D + +AVL C+ G V+ G H +A S ++ R + +VD + G+
Sbjct: 319 EGISPDGVSYIAVLCACSHAGWVEKG--FHYFASMSDVHGIRPELDHYACMVDLLGRAGL 376
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
L+ A +P + + V W A++ G E+G
Sbjct: 377 LEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMG 412
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H +H + + + +++ A + + I A + F+ R V + + I +
Sbjct: 242 HGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLA 301
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+NG SEE ++LF +K GI PD ++ +L A C H + GF F S
Sbjct: 302 MNGCSEEALQLFEQMKGEGISPDGVSYIAVLCA-----------CSHAGWVEKGFHYFAS 350
Query: 137 I 137
+
Sbjct: 351 M 351
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 271/464 (58%), Gaps = 3/464 (0%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIK 73
H+ QI +H +S C +I +A +F + + ++N+M++
Sbjct: 2 AHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLR 61
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
A++ + L+ + + G P+ YTF+ LL+AC + DL G +H + +R G+E
Sbjct: 62 AFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEA 121
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ ++ G++ LY SC MD ++FD +RDV+ +I+G+ K G V LF EM
Sbjct: 122 YDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMP 181
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E++ VSW+ MI+ + G EAL LF++M+ F + +V L CA LGA+D G+W
Sbjct: 182 EKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRW 241
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IH+Y + + + + +G AL+D Y KCG ++TA VF E+ ++V ++ ++ISGLA +G
Sbjct: 242 IHAYVDRNRMVLDRI-LGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHG 300
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+E++ +M +GV PN+ TF+ +L+ C+ GLVE+ +F SMT ++ I P ++HY
Sbjct: 301 HSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHY 360
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GC+VD+LGR+G + +A ++R M + P++ + G+LL++CR HG VEL + V+ L
Sbjct: 361 GCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSL 420
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ G +VLLSN+YA +W+D +R M E VKK PG SLIE
Sbjct: 421 DHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIE 464
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/474 (36%), Positives = 271/474 (57%), Gaps = 11/474 (2%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+++RT + Q+HA + + I + + + + A ++F M +++ +NS+
Sbjct: 906 KDSRTGV-QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSL 964
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I Y NGP E + LF + G PDE T A ++ AC G+ R G+ VH +++S
Sbjct: 965 ITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKS-- 1022
Query: 132 ERFGSIRI---GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+RF + +V++Y CG+ VFD M+ R V+ +I G+ + +V+ +
Sbjct: 1023 DRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMV 1082
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M E++V++WN++I++ ++G + EALRLF ++ ++ T VL C + +
Sbjct: 1083 FSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADL 1142
Query: 249 DIGQWIHSYAESSGLY-----RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+GQ H + G V VGN+LVD Y K G +D VF+ + ++ VSWN
Sbjct: 1143 QLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWN 1202
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI G A NGR + + L+E+M+ SP+ T +GVL+ C H+GLVE+ R F SMT
Sbjct: 1203 AMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTED 1262
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
H I+P+ +HY CM+D+LGR+G ++E +LI+ MS+ P+A +W SLL SCR H +VE+ E
Sbjct: 1263 HGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEW 1322
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +L L+P NSG YVLLSN+YAE G+W D +R M+ V K PG S IE
Sbjct: 1323 AAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIE 1376
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 193/412 (46%), Gaps = 33/412 (8%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
VS + I A ++F M+ +++ +N+M+ Y + + LF ++ D
Sbjct: 325 VSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDA 384
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
T +L AC G+ D+ G+ VH I+ GF ++ +V +Y+ CG + +
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAER---- 440
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
L LF ER SWN +IS + AL
Sbjct: 441 -------------------------LLLFEMGSERDSYSWNSLISGYERHSMSEAALYAL 475
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M+ + +++T + L CA + + G IH+Y G Y + + L+D YCK
Sbjct: 476 TKMQSEVTP-NQSTFSSALAACANIFLLKQGMQIHAYMIRKG-YEIDDILRSVLIDMYCK 533
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
C D + +F+ P ++V+ WN+MI G A++G+GE G++L+++M +G+ + TF+G
Sbjct: 534 CRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGA 593
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C G V R F M SI+P +EHY CM+++LG+ GC+ E D + M P
Sbjct: 594 LVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEP 652
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA-EGGR 451
A+W + CR +G+ +L E A K + + P +V + + +GGR
Sbjct: 653 TTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDGGR 704
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 201/406 (49%), Gaps = 14/406 (3%)
Query: 20 QIHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+H H + QSN+IL V V G + A + F+ + P+ + +N +++ Y L
Sbjct: 172 QLHGHIAKRDF-QSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLA 230
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G + V +F + + G+ P YT + + AC L G+C+H ++R G+E +R
Sbjct: 231 GMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVR 290
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
VV++Y CG MD +F+ +D+++ ++ G G + +F M+ER++V
Sbjct: 291 SSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLV 350
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN M++ +S + AL LF +MR + E D T+ +VL C + + G+ +H++A
Sbjct: 351 SWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFA 410
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARN--VFKEIPRKNVVSWNAMISGLAFNGRGE 316
G + + + NALV Y KCG L +A +F+ ++ SWN++ISG + E
Sbjct: 411 IKCGFFSSPI-LKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 469
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ +M ++ V+PN++TF L CA+ L+++ ++ A M I E +
Sbjct: 470 AALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYM-----IRKGYEIDDIL 523
Query: 377 VDVLGRSGCVREAYDL-IRSMSIRP--NAAIWGSLLSSCRTHGHVE 419
VL C +D IR RP + +W S++ C G E
Sbjct: 524 RSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGE 569
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 11/325 (3%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+V Y G++ D +VFDE+ H + N ++ + G LF + + S+
Sbjct: 801 LVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSY 860
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N +I++L + R ++AL M F L+ + + L CA G +H+
Sbjct: 861 NAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSK 920
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
S + K V +G+AL+D Y KC + AR VF+ +P +N+VSWN++I+ NG +
Sbjct: 921 SP-HAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALV 979
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ M+ G P++ T V++ CA + R++ A + ++ +VD+
Sbjct: 980 LFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMY 1039
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGN 438
+ G R A + M+ R + SL++ +VE A+ +++ N+ WN
Sbjct: 1040 AKCGRTRAARCVFDRMASR-SVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWN--- 1095
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMR 463
+L YA+ G ++ E LR+++R
Sbjct: 1096 --VLIAAYAQNG--EEEEALRLFVR 1116
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 152/351 (43%), Gaps = 36/351 (10%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H + +S L A +F+ + +P +N++I A + + + + A
Sbjct: 823 HPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAA 882
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ + Y+FA L AC D R G VH + +S + I ++++Y C
Sbjct: 883 MHADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEW 942
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
++ +VF+ M ER++VSWN +I+ ++
Sbjct: 943 PEEARRVFEAMP-------------------------------ERNIVSWNSLITCYEQN 971
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G EAL LF M F DE T+ +V+ CA L A G+ +H+ S +R+ + +
Sbjct: 972 GPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVL 1031
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NALVD Y KCG AR VF + ++VVS ++I+G A + E ++ QM+ K
Sbjct: 1032 SNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEK-- 1089
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
N + ++ A G E+A LF + S+ P YG +++ G
Sbjct: 1090 --NVIAWNVLIAAYAQNGEEEEALRLFVRLK-RESVWPTHYTYGNVLNACG 1137
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 18/395 (4%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
++ CG++ + A ++F+ M +N++I A S G E + LF+ + +LGI P +
Sbjct: 95 LAACGSVAD---ARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
T A +L C DL + +HG I + F+ + +V++Y +C + D + FD+
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL--- 217
+ + I N+++ + G D + +F M V +S + RD+ AL
Sbjct: 212 ILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEG 271
Query: 218 RLFHE-MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
R H + +E +V+ + A+ GA+D Q + + A K + + ++V
Sbjct: 272 RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAP-----MKDMVMSTSIVS 326
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
CG + A+ VF+ + +N+VSWNAM++G + + L++QM + + T
Sbjct: 327 GLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAIT 386
Query: 337 FVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
VL+ C + K E+ FA G S P L++ +V + + GC+R A L+
Sbjct: 387 LGSVLSACTGILDIGKGEEVHAFAIKCGFFS-SPILKN--ALVRMYSKCGCLRSAERLLL 443
Query: 395 -SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
M ++ W SL+S H E A +A+ ++
Sbjct: 444 FEMGSERDSYSWNSLISGYERHSMSEAALYALTKM 478
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 121/269 (44%), Gaps = 5/269 (1%)
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N I G V LF M R SWN +I++ ++G SEAL LF M
Sbjct: 89 NRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+AT+ +VL CA + + +H + V+ +G ALVD Y C +L AR
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVI-LGTALVDVYGNCFLLADARR 207
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
F +I N +SWN ++ G G++ V+++ +M++ GV P T + C
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+E+ R + A + H ++ +VD+ + G + A L +++ + + S++
Sbjct: 268 LEEGRCIHAFVL-RHGYEHHVHVRSSVVDMYAKCGAMDAAQSLF-NLAPMKDMVMSTSIV 325
Query: 410 SSCRTHGHVELAEHAVKELI--NLEPWNS 436
S + G + A+ + + NL WN+
Sbjct: 326 SGLASCGRIADAKRVFEGMKERNLVSWNA 354
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIHA+ +R +++ + + + + Y+ +IF + V+L+NSMI + +G
Sbjct: 507 QIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSG 566
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
E + LF ++ GI D TF L +C+ G +R+G+
Sbjct: 567 KGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGR 607
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 262/467 (56%), Gaps = 4/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFN 69
+ + L QIHA L+ L Q + + F+S C + + + YA +F+ P L+N
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
MI+ +S + E + L+ + + YTF LLKAC + +H +I +
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G+E ++ Y G +FD + D + N +I G+ K G +D L LF
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
R+M E++ +SW MIS ++ + EAL+LFHEM++ E D ++ L CA+LGA++
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+WIHSY + + V +G L+D Y KCG ++ A VFK I +K+V +W A+ISG
Sbjct: 265 QGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A++G G + + +M G+ PN TF VLT C++ GLVE+ + +F SM +++ P
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+LGR+G + EA I+ M ++PNA IWG+LL +CR H ++EL E + LI
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++P++ G YV +NI+A +WD A R M+E V K PG S I
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 269/479 (56%), Gaps = 35/479 (7%)
Query: 32 QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP-VKLFAL 90
Q ++ F+S C L+ I A F ++NP+VL+FN++I+ SE+ V +
Sbjct: 8 QDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHM 67
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
L+N + P Y+F+ L+KAC + D G+ VHG + + GF+ ++ ++E Y++ G
Sbjct: 68 LRN-NVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGD 126
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+ +VFD+M RDV MI + GD+ LF EM E++V +WN MI GK
Sbjct: 127 VGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKL 186
Query: 211 G-------------------------------RDSEALRLFHEMRDQAFELDEATVVAVL 239
G R E + LFH++ D+ DE T+ V+
Sbjct: 187 GNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVI 246
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LGA+ +G+ +H Y G + V +G++L+D Y KCG +D A VF ++ KN+
Sbjct: 247 SACAHLGALALGKEVHLYLVLQG-FDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNL 305
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
WN +I GLA +G E + ++ +M K + PN TF+ +LT C HAG +E+ R F S
Sbjct: 306 FCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMS 365
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P +EHYGCMVD+L ++G + +A ++IR+M++ PN+ IWG+LL+ C+ H ++E
Sbjct: 366 MVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLE 425
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-KKSPGQSLIE 477
+A AV+ L+ LEP NSG+Y LL N+YAE RW++ +R M++ V K+ PG S +E
Sbjct: 426 IAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVE 484
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 273/459 (59%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+++A + ++L+++ V + N I A ++F++ ++ L N+M Y G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + +F L+ + G+ PD + + +C + ++ G+ HG ++R+GFE + +I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y C + D ++FD MS++ V+ N ++ G+ + G+VD F M E+++VS
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN +IS L + EA+ +F M+ Q D T++++ C LGA+D+ +WI+ Y
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
E +G+ V +G LVD + +CG ++A ++F + ++V +W A I +A G E
Sbjct: 497 EKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL++ MI +G+ P+ FVG LT C+H GLV++ +E+F SM LH + P HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA LI M + PN IW SLL++CR G+VE+A +A +++ L P +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN+YA GRW+D +R+ M+E ++K PG S I+
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 34/304 (11%)
Query: 45 GTLNEIKYATKIF-NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
GT + +A ++F N + ++NS+I+ Y+ +G E + LF + N GI PD+YTF
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 137
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L AC G +HG I++ G+ + ++ +V Y CG++D KVFDEMS
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V VSW MI + +A+ LF M
Sbjct: 198 RNV-------------------------------VSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 224 -RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
RD+ + T+V V+ CA+L ++ G+ ++++ +SG+ + V +ALVD Y KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCN 285
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+D A+ +F E N+ NAM S G + ++ M+ GV P++ + + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 343 CCAH 346
C+
Sbjct: 346 SCSQ 349
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 43/345 (12%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIH ++ + + L HF + CG E+ A K+F++M +V+ + SMI Y+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECG---ELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 77 LNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+++ V LF ++++ + P+ T ++ AC + DL G+ V+ I SG E
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y C +D ++FDE ++ + N M + ++G L R
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG-------LTR----- 319
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
EAL +F+ M D D ++++ + C++L + G+ H
Sbjct: 320 -------------------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y +G + ++ NAL+D Y KC DTA +F + K VV+WN++++G NG
Sbjct: 361 GYVLRNG-FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+ E +E M K N ++ +++ L E+A E+F SM
Sbjct: 420 DAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N +I SG +EA+ LF M + D+ T L CA+ A G IH
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G Y K + V N+LV FY +CG LD+AR VF E+ +NVVSW +MI G A + V
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+L+ +M+ + V+PN T V V++ CA +E +++A
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/536 (36%), Positives = 292/536 (54%), Gaps = 77/536 (14%)
Query: 18 LTQIHAHFLRHKLHQSN--LILAHFVSVCGTLNEI--KYATKIFNQMRNPSVLLFNSMIK 73
L QIHA ++ I ++C I +YA + Q+R P++ L+N++I+
Sbjct: 38 LKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 97
Query: 74 AYSL-NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE------- 125
+ N S E + ++ + + GI PD YT +LKAC +R G+ VHG+
Sbjct: 98 GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLA 157
Query: 126 -----------------IIRS---------------------GFERFGSIRIGVVELYTS 147
+IRS G+ + G R GV +
Sbjct: 158 SDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEM 217
Query: 148 CGQ--MDDGMKVFDEMS--------------HR----------DVIVRNLMIHGFCKKGD 181
CG+ DGM + +S HR DV V N ++ + K GD
Sbjct: 218 CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGD 277
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ +F+EM ++VVSWN MIS L + G+ E+L +F +M+ + D+ T+VAVL
Sbjct: 278 ANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNS 337
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LG +++G+W+H+Y + + + R +GNALVD Y KCG +D A VF+ + RK+V S
Sbjct: 338 CANLGVLELGKWVHAYLDRNQI-RADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYS 396
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+ AMI GLA +G+G ++L+ +M G+ P++ TFVGVLT C+H GLVE+ R+ F M+
Sbjct: 397 YTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMS 456
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++++ P LEHYGCMVD+LGR+G + EA + IR+M I P+A + G+LL +C+ HG VEL
Sbjct: 457 TIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELG 516
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E +K++ +EP G YVL+SNIY+ RW DA LR M+E N++K+PG S IE
Sbjct: 517 ESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIE 572
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 282/536 (52%), Gaps = 69/536 (12%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
LH + + QIHA L+ LHQ + ++ + A +FN + +P+V L+
Sbjct: 28 LHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 69 NSMIKAYSLNG--PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
NS+I+A++ N PS F + KN G++PD +T+ LLKAC G L + + +H +
Sbjct: 88 NSIIRAHAHNTSHPSLPFNAFFQMQKN-GLFPDNFTYPFLLKACTGPSSLPLVRMIHAHV 146
Query: 127 IRSGF--------------ERFGSIRI-GVVELYTS------------------CGQMDD 153
+ GF R GS + G + L+ + CG+++
Sbjct: 147 EKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEG 206
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
K+FDEM RD++ N M+ G+ K G++D+ LF M +R++VSW+ M+ K G
Sbjct: 207 ACKLFDEMPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDM 266
Query: 214 S-------------------------------EALRLFHEMRDQAFELDEATVVAVLPIC 242
EA L+ +M + D+ ++++L C
Sbjct: 267 DMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAAC 326
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVS 301
A G + +G+ IH+ + +R V NA +D Y KCG LD A +VF + +K+VVS
Sbjct: 327 AESGMLGLGKRIHA-SMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVS 385
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MI G A +G GE +EL+ +M+ +G P+ TFVG+L C HAGLV + R+ F SM
Sbjct: 386 WNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSME 445
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ IVP +EHYGCM+D+LGR G ++EA+ L+RSM + PNA I G+LL++CR H V+ A
Sbjct: 446 KVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHNDVDFA 505
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++L +EP + GNY LLSNIYA+ G W + +R+ M +K G S IE
Sbjct: 506 RAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIE 561
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 270/464 (58%), Gaps = 9/464 (1%)
Query: 18 LTQIHAHFL-----RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
L QIH L RHKL S L L + S+ + + YA +F+++ +P+ +++N+MI
Sbjct: 27 LKQIHGQLLKKGTIRHKLTVSRL-LTTYASM--EFSNLTYARMVFDRISSPNTVMWNTMI 83
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+AYS + EE + L+ + + I + YTF LLKAC + L +H +II+ GF
Sbjct: 84 RAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFG 143
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
++ +Y G + +FD + RD++ N MI G+ K G+V+ +F+ M
Sbjct: 144 SEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAM 203
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
E++V+SW MI ++G EAL L +M + D+ T+ L CA LGA++ G+
Sbjct: 204 PEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGK 263
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
WIH+Y + + V +G AL+D Y KCG + A VF ++ +K V +W A+I G A +
Sbjct: 264 WIHTYIGKNKIKIDPV-LGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVH 322
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G+G ++ + QM G+ P TF VLT C+H GLVE+ + LF SM+ +++ P +EH
Sbjct: 323 GKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEH 382
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCMVD+LGR+G ++EA + + SM I+PNAAIWGSLL++C H H+EL + K LI L+
Sbjct: 383 YGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELD 442
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
P + G Y+ L++I+A G WD+A +R ++ + PG S I
Sbjct: 443 PEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTI 486
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/425 (39%), Positives = 242/425 (56%), Gaps = 31/425 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F ++ + +N+MI Y+ +G EE + F +K + P+E T +L AC
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
G L +G V I G + ++++Y+ CG
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCG----------------------- 313
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
D+DK LF + E+ ++SWN+MI EAL LF +M+ E ++
Sbjct: 314 --------DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPND 365
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T V++LP CA LGA+D+G+WIH+Y + L S+ +L+D Y KCG ++ A+ VF
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ K++ SWNAMISGLA +G + +EL+ QM +G P+ TFVGVL+ C+HAGLVE
Sbjct: 426 GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVEL 485
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R+ F+SM + I P L+HYGCM+D+LGR+G EA L+++M ++P+ AIWGSLL +C
Sbjct: 486 GRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGAC 545
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R HG+VEL E A K L LEP N G YVLLSNIYA GRWDD +R + + +KK PG
Sbjct: 546 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 605
Query: 473 QSLIE 477
S IE
Sbjct: 606 CSSIE 610
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 218/425 (51%), Gaps = 4/425 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNP 63
L LL + +L QIH+ ++ LH + L+ + C + YA +F + P
Sbjct: 36 LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ ++N+MI+ SL+ + + + G+ P+ YTF LLK+C VG + G+ +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G +++ G E + ++ +Y G++ VF + S RD + +I G+ +G +D
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF E+ R VSWN MI+ +SGR EAL F EM+ +E+T+V VL CA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+ G++++G W+ S+ E GL + V NAL+D Y KCG LD AR++F+ I K+++SWN
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLV-NALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MI G + + + L+ +M V PN TFV +L CA+ G ++ + + A +
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ N + ++D+ + G + A + M + + W +++S HGH +A
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALE 453
Query: 424 AVKEL 428
+++
Sbjct: 454 LFRQM 458
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/441 (38%), Positives = 265/441 (60%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
LA + CG + + + K+F+ M V+ + M+ +Y +E + LFA +KN G+
Sbjct: 191 LAGAYAACGCVRDTR---KVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGV 247
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD+ A +L AC + LR+G+ +H ++ S I ++ LY SC M+ K
Sbjct: 248 VPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEK 307
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+++EM +D++ M+ G+ + V+ +F M E+ VVSW+ MIS S + +EA
Sbjct: 308 LYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEA 367
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF+ M++ DE T+++V+ CA LG++D +WIH++ ++SGL KV+ + NAL+D
Sbjct: 368 LSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGL-NKVLHICNALID 426
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+ KCG ++ A NVF E+P KNV++W +MIS A +G G+ + L+EQM +G PN+ T
Sbjct: 427 MFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVT 486
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+ +L C HAGLV + R LF+SM + I P EHYGCMVD+LGR+ ++EA LI SM
Sbjct: 487 FLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESM 546
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ PN IWGSLL++C HG ++L A K+++ L+P + G VLL IY + ++A+
Sbjct: 547 HLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQ 606
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M+ + V K G S +E
Sbjct: 607 EVRGVMKLHRVSKETGLSWME 627
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 155/365 (42%), Gaps = 75/365 (20%)
Query: 89 ALLKNLGI-WPDEYTFAPLLKA---CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
A L+ G+ P LL++ C G G H +R+G G + +
Sbjct: 137 ACLRRAGLPAPGPRALPALLRSAARCEGAGAYVAA--THALAVRTGALDDGFVGTALAGA 194
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y +CG + D KVFD M+ RDV+ +M+ +C+ + + L LF +M+ VV
Sbjct: 195 YAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVP----- 249
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
D+ + VLP C + + IG+ IHSY S +
Sbjct: 250 --------------------------DQLILATVLPACGHIRHLRIGKAIHSYMLVSDMI 283
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ +AL+ Y C ++ A ++ E+PRK++VS AM+SG A N + E+ +++
Sbjct: 284 IG-AHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDG 342
Query: 325 MIAKGV--------------SPNKA-----------------TFVGVLTCCAHAGLVEKA 353
M K V PN+A T + V++ CA+ G ++KA
Sbjct: 343 MPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKA 402
Query: 354 R--ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F +GL+ + L ++D+ + G + A ++ M ++ N W S++S+
Sbjct: 403 KWIHAFIKNSGLNKV---LHICNALIDMFAKCGGINLALNVFNEMPLK-NVITWTSMISA 458
Query: 412 CRTHG 416
HG
Sbjct: 459 FAMHG 463
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 143/346 (41%), Gaps = 67/346 (19%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH++ L + I + +S+ + ++ A K++N+M ++ +M+ Y+ N
Sbjct: 273 IHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRK 332
Query: 81 SE-------------------------------EPVKLFALLKNLGIWPDEYTFAPLLKA 109
E E + LF ++ GI DE T ++ A
Sbjct: 333 VEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISA 392
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C +G L + +H I SG + I +++++ CG ++ + VF+EM ++VI
Sbjct: 393 CANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITW 452
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
MI F GD GKS +LRLF +M+D+ E
Sbjct: 453 TSMISAFAMHGD--------------------------GKS-----SLRLFEQMKDEGAE 481
Query: 230 LDEATVVAVLPICARLGAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+E T +++L C G V G+ + S + G+ K G +VD + ++ A
Sbjct: 482 PNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYG-CMVDLLGRAKLMQEAV 540
Query: 289 NVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
++ + + NV W ++++ +G +LG ++++ + PN
Sbjct: 541 SLIESMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQ--LDPN 584
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 282/481 (58%), Gaps = 9/481 (1%)
Query: 5 ILRLLHGRNTRTHLTQ---IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+ LL+ NT L + IH+H L ++ +++ N I+ A + F++M
Sbjct: 283 FVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS 342
Query: 62 NPSVLLFNSMIKAYSLNG--PSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDL 116
V+ +++MI Y+ +G E ++F LL+ + G++P++ TF +LKAC G L
Sbjct: 343 KRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGAL 402
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G+ +H EI + GFE S++ + +Y CG + + +VF +M +++V+ ++ +
Sbjct: 403 EQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMY 462
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K GD+ +F EM R+VVSWNLMI+ +SG ++ L M+ + F+ D T++
Sbjct: 463 IKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTII 522
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++L C L A++ G+ +H+ A GL V V +L+ Y KCG + AR VF +I
Sbjct: 523 SILEACGALSALERGKLVHAEAVKLGLESDTV-VATSLIGMYSKCGEVTEARTVFDKISN 581
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++ V+WNAM++G +G G V+L+++M+ + V PN+ TF V++ C AGLV++ RE+
Sbjct: 582 RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + P +HYGCMVD+LGR+G ++EA + I+ M P+ ++W +LL +C++H
Sbjct: 642 FRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHD 701
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+V+LAE A ++ LEP N+ YV LSNIYA+ GRWDD+ +R M + +KK G+S I
Sbjct: 702 NVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI 761
Query: 477 E 477
E
Sbjct: 762 E 762
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 204/436 (46%), Gaps = 56/436 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L +F S G + ++ ++F +M V+ ++SMI AY+ N + F +K+ I
Sbjct: 119 LINFYSKFGDVASVE---QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ TF +LKAC L + +H + SG E ++ ++ +Y+ CG++ +
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F ++M+ER+VVSW +I + + + +EA
Sbjct: 236 IF-------------------------------QKMKERNVVSWTAIIQANAQHRKLNEA 264
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L+ +M + T V++L C A++ G+ IHS+ GL VV V NAL+
Sbjct: 265 FELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV-VANALIT 323
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG-----VELYEQMIAKGVS 331
YCKC + AR F + +++V+SW+AMI+G A +G + +L E+M +GV
Sbjct: 324 MYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVF 383
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PNK TF+ +L C+ G +E+ R++ A ++ + + + ++ + G + EA
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQ 442
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWN--------SGN--- 438
+ M N W SLL+ G + AE E+ N+ WN SG+
Sbjct: 443 VFSKME-NKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAK 501
Query: 439 -YVLLSNIYAEGGRWD 453
+ LLS++ EG + D
Sbjct: 502 VFELLSSMKVEGFQPD 517
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 202/450 (44%), Gaps = 27/450 (6%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG EI A +IF +M+ +V+ + ++I+A + + E +L+ + GI
Sbjct: 220 LITMYSKCG---EISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI 276
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ TF LL +C L G+ +H I G E + ++ +Y C + D +
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKG-----DVDKGLYLFREMRERSVVSWNLMISSLGKS- 210
FD MS RDVI + MI G+ + G +D+ L MR V + S+ K+
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396
Query: 211 ---GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
G + ++ E+ FE D + A+ + A+ G++ + + S E+ K
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMEN-----KN 451
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
V +L+ Y KCG L +A VF E+ +NVVSWN MI+G A +G EL M
Sbjct: 452 VVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKV 511
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+G P++ T + +L C +E+ + + A L + + ++ + + G V
Sbjct: 512 EGFQPDRVTIISILEACGALSALERGKLVHAEAVKL-GLESDTVVATSLIGMYSKCGEVT 570
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HVELAEHAVKELINLEPWNSGNYVLLS 443
EA + +S R A W ++L+ HG V+L + +KE + P N + +
Sbjct: 571 EARTVFDKISNRDTVA-WNAMLAGYGQHGIGPEAVDLFKRMLKERV---PPNEITFTAVI 626
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
+ G + + M+E + + PG+
Sbjct: 627 SACGRAGLVQEGREIFRIMQE-DFRMKPGK 655
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 187/435 (42%), Gaps = 85/435 (19%)
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G +E ++L ++K G+ + T+ +++ C + G+ VH
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHK-------------- 102
Query: 139 IGVVELYTSCGQMDD-GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
Q+D+ G+ + D+ + N +I+ + K GDV +FR M R V
Sbjct: 103 -----------QLDELGLAI-------DIYLGNSLINFYSKFGDVASVEQVFRRMTLRDV 144
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W+ MI++ + ++A F M+D E + T +++L C ++ + IH+
Sbjct: 145 VTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTV 204
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
++SG+ V +V AL+ Y KCG + A +F+++ +NVVSW A+I A + +
Sbjct: 205 VKASGMETDV-AVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS--IVPNLEHY 373
ELYE+M+ G+SPN TFV +L C + + R + + ++ GL + +V N
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN---- 319
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIR---------------------------------- 399
++ + + C+++A + MS R
Sbjct: 320 -ALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378
Query: 400 -----PNAAIWGSLLSSCRTHGHVELAE--HAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
PN + S+L +C HG +E HA + E S + N+YA+ G
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIF-NMYAKCGSI 437
Query: 453 DDAETLRMWMRENNV 467
+AE + M NV
Sbjct: 438 YEAEQVFSKMENKNV 452
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 115/241 (47%), Gaps = 34/241 (14%)
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
L K+GR EA++L ++ + ++ T ++ CA+L + G+ +H + GL
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ +GN+L++FY K G + + VF+ + ++VV+W++MI+ A N + +E+M
Sbjct: 113 IY-LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMK 171
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVP---------------- 368
+ PN+ TF+ +L C + ++EKARE+ +G+ + V
Sbjct: 172 DANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231
Query: 369 ------------NLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCR 413
N+ + ++ + + EA++L M I PNA + SLL+SC
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291
Query: 414 T 414
T
Sbjct: 292 T 292
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 271/459 (59%), Gaps = 1/459 (0%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+ IHA L+ + +++ G+ + A K+F++M ++ +NS++ Y
Sbjct: 97 STIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQC 156
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E + +F ++ G+ D T ++ AC +G+ V + I + E +
Sbjct: 157 KRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLG 216
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y G + VFD+M R+++ N MI G+ K G++ LF M +R V+
Sbjct: 217 NTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVI 276
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SW MI+S ++G+ +EALRLF EM + + DE TV +VL CA G++D+G+ H Y
Sbjct: 277 SWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYI 336
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ + + + VGNAL+D YCKCG+++ A VFKE+ +K+ VSW ++ISGLA NG +
Sbjct: 337 QKYDV-KADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSA 395
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++ + +M+ + V P+ FVG+L CAHAGLV+K E F SM ++ + P ++HYGC+VD
Sbjct: 396 LDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVD 455
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L RSG ++ A++ I+ M + P+ IW LLS+ + HG++ LAE A K+L+ L+P NSGN
Sbjct: 456 LLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGN 515
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVL SN YA RW+DA +R M ++NV+K G S IE
Sbjct: 516 YVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIE 554
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 191/440 (43%), Gaps = 80/440 (18%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
N RT + I+ + L S ++ AH +F Q+ P++ +N MI
Sbjct: 5 NLRTDPSTIYNLIKSYALSPSTILKAH---------------NLFQQIHRPTLPFWNIMI 49
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ +S++ E ++++ L+ G+ + T+ L KAC V D+ G +H +++ GFE
Sbjct: 50 RGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFE 109
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ +Y SCG + KVFDEM RD
Sbjct: 110 SHLYVSNALINMYGSCGHLGLAQKVFDEMPERD--------------------------- 142
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+VSWN ++ G+ R E L +F MR + D T+V V+ C LG +
Sbjct: 143 ----LVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVAD 198
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL--- 309
+ Y E + + V +GN L+D Y + G++ AR VF ++ +N+VSWNAMI G
Sbjct: 199 AMVDYIEENNVEIDVY-LGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKA 257
Query: 310 --------------------------AFNGRGEL--GVELYEQMIAKGVSPNKATFVGVL 341
+++ G+ + L+++M+ V P++ T VL
Sbjct: 258 GNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVL 317
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ CAH G ++ E + + ++ ++D+ + G V +A ++ + M + +
Sbjct: 318 SACAHTGSLDVG-EAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMR-KKD 375
Query: 402 AAIWGSLLSSCRTHGHVELA 421
+ W S++S +G + A
Sbjct: 376 SVSWTSIISGLAVNGFADSA 395
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 270/463 (58%), Gaps = 10/463 (2%)
Query: 20 QIHAHFLRHKL--HQSNLILA-HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIHA LRH L H +L + +I+++ +F+Q +P + LF + I S
Sbjct: 45 QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 104
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+NG ++ L+ L + I P+E+TF+ +LK+C + G+ +H +++ G
Sbjct: 105 INGLKDQAFLLYVQLLSSQINPNEFTFSSILKSC----STKSGKLIHTHVLKFGLGLDPY 160
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ G+V++Y G + KVFD M R ++ MI + K+G+V+ LF M ER
Sbjct: 161 VATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCERD 220
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+VSWN+MI + G S+AL LF ++ D + DE TVVA L C+++GA++ G+WIH
Sbjct: 221 IVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIH 280
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ SS + R V V AL+D Y KCG L+ A VF + PRK++V+WNAMI+G A +G
Sbjct: 281 VFVNSSRI-RLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYS 339
Query: 316 ELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ + L+++M G+ P TF+G L CAHAGLV + ++F SM + I P +EHYG
Sbjct: 340 QDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYG 399
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
C+V +LGR+G ++ AY++I++M++ ++ +W S+L SC+ HG L + + LI
Sbjct: 400 CLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNIS 459
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NSG YVLLSNIYA G ++ +R M+E + K PG S IE
Sbjct: 460 NSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIE 502
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 264/436 (60%), Gaps = 4/436 (0%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
+ CG + + A K+F+ M V+ + M+ +Y +E + FA +KN G+ D+
Sbjct: 116 AACGCVGD---ARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQL 172
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
A +L AC + LR G+ +H ++ S + ++ LY SC M+ K+++ M
Sbjct: 173 ILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGM 232
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+D++ M+ G+ + + Y+F M E+ VVSW+ MIS S + +EAL LF+
Sbjct: 233 PRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFN 292
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
+M++ DE T+++V+ CA LG++D +WIH++ +++GL K++ + NAL+D + KC
Sbjct: 293 DMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGL-NKILHICNALIDMFAKC 351
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G ++ A N+F E+P+KNV++W +MI+ A +G G+ + L+EQM +GV PN+ TF+ +L
Sbjct: 352 GGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLL 411
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C HAGLV + R LF+SM + I P EHYGCMVD+LGR+ ++EA +LI SM +RPN
Sbjct: 412 YACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPN 471
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
+WGSLL++C HG ++L A K+++ L+P + G VLLS IY + +DA+ +R
Sbjct: 472 VPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDV 531
Query: 462 MRENNVKKSPGQSLIE 477
M+ V K G S ++
Sbjct: 532 MKLQGVSKETGLSWMD 547
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 164/340 (48%), Gaps = 25/340 (7%)
Query: 89 ALLKNLGIWPDEYTFAPLL----KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
A L+ G+ P P L C+G G G H R G G +R +V
Sbjct: 57 ACLRRTGLPPPGPRALPALLRSAARCVGAGAYVRG--AHALAFRVGSLDDGFVRTALVGA 114
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y +CG + D KVFD M+ RDV+ +M+ +C+ + + L F +M+ V+S L++
Sbjct: 115 YAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLIL 174
Query: 205 SS-LGKSG-----RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
++ L G R +++ + + D ++ A++ + A ++++ + ++
Sbjct: 175 ATVLSACGHIRHLRTGKSIHSYMLVSD--ILINAHLSSALINLYASCASMEMAEKLY--- 229
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+G+ RK + A+V Y + + AR +F +P K+VVSW+AMISG A + +
Sbjct: 230 --NGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEA 287
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--ELFASMTGLHSIVPNLEHYGCM 376
+ L+ M G+ P++ T + V++ CA+ G ++KA+ F GL+ I L +
Sbjct: 288 LSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKI---LHICNAL 344
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+D+ + G + A ++ M + N W S++++ HG
Sbjct: 345 IDMFAKCGGINLALNIFNEMP-QKNVITWTSMITAFAMHG 383
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 144/343 (41%), Gaps = 66/343 (19%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--------- 60
H R+ RT IH++ L + + + + +++ + ++ A K++N M
Sbjct: 183 HIRHLRTG-KSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSST 241
Query: 61 -------RN---------------PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
RN V+ +++MI Y+ + E + LF ++ GI P
Sbjct: 242 AMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRP 301
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
DE T ++ AC +G L + +H I +G + I +++++ CG ++ + +F
Sbjct: 302 DEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIF 361
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
+EM ++VI MI F GD GKS AL
Sbjct: 362 NEMPQKNVITWTSMITAFAMHGD--------------------------GKS-----ALC 390
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI-HSYAESSGLYRKVVSVGNALVDF 277
LF +MR++ E +E T + +L C G V G+ + S + G+ K G +VD
Sbjct: 391 LFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYG-CMVDL 449
Query: 278 YCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGV 319
+ ++ A N+ + + R NV W ++++ +G +LG
Sbjct: 450 LGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGA 492
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
LH N ++ F CG +N A IFN+M +V+ + SMI A++++G + + LF
Sbjct: 338 LHICNALIDMFAK-CGGIN---LALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFE 393
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSIRIGVVELYTSC 148
++N G+ P+E TF LL AC G + G+ + +++ G E +V+L
Sbjct: 394 QMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRA 453
Query: 149 GQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
M + + + + M R +V V ++ GD+ G + +++ +
Sbjct: 454 KLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQ 500
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 168/468 (35%), Positives = 266/468 (56%), Gaps = 12/468 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN--QMRNPSVLLFNSMI 72
+ QIH H LR L QS IL + L Y ++ Q RNP L+ ++I
Sbjct: 65 QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNP--FLWTAVI 122
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ Y++ G +E + ++ ++ I P +TF+ LLKAC +GDL +G+ H + R
Sbjct: 123 RGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFR--LR 180
Query: 133 RFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +G ++++Y CG + KVFDEM RDVI +I + + G+++ LF
Sbjct: 181 GFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFE 240
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+ + +V+W M++ ++ + EAL F M DE TV + CA+LGA
Sbjct: 241 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 300
Query: 251 GQWIHSYAESSGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
A+ SG V +G+AL+D Y KCG ++ A NVF + KNV S+++MI GL
Sbjct: 301 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGL 360
Query: 310 AFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A +GR + ++L+ M+ + + PN TFVG LT C+H+GLV++ R++FASM + P
Sbjct: 361 ATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEP 420
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+HY CMVD+LGR+G ++EA +LI++MS+ P+ +WG+LL +CR H + ++AE A + L
Sbjct: 421 TRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHL 480
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LEP GNY+LLSN+Y+ G W ++R ++E +KK+P S +
Sbjct: 481 FELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWV 528
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 286/551 (51%), Gaps = 76/551 (13%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E K + LL T L QI A + H L ++ + F++ C L I+ A ++F++
Sbjct: 21 VEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARRVFDKT 80
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
P+ +N+M + Y+ + V LFA + G P+ +TF ++K+C + G+
Sbjct: 81 AQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASPNCFTFPMVVKSCATANAAKEGE 140
Query: 121 CVHGEIIRSGFER--------------------------FGSIR-------IGVVELYTS 147
VH + + GF+ F +R +V + +
Sbjct: 141 EVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHVA 200
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
C M ++FD RDV++ N+++ G+ + GD+ LF M +R V+SWN ++S
Sbjct: 201 CRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGY 260
Query: 208 GKSGRDSEALRLFHEM------------------------------------------RD 225
+G ++LF EM D
Sbjct: 261 ATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSD 320
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
++ TVVAVL C+RLG +++G+W+H YAES G Y+ + VGNAL+D Y KCG+++
Sbjct: 321 GVVVPNDYTVVAVLTACSRLGDLEMGKWVHVYAESIG-YKGNLFVGNALIDMYAKCGVIE 379
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A +VF + K++++WN +I+GLA +G + L+E+M G P+ TFVG+L+ C
Sbjct: 380 KALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACT 439
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H GLV F SM +SIVP +EHYGCMVD+LGR+G + +A D++R M + P+A IW
Sbjct: 440 HMGLVRNGLLHFQSMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIW 499
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
+LL +CR + +VE+AE A++ LI LEP N GN+V++SNIY + GR D L++ MR+
Sbjct: 500 AALLGACRMYKNVEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDT 559
Query: 466 NVKKSPGQSLI 476
+K PG S+I
Sbjct: 560 GFRKVPGCSVI 570
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 42/244 (17%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG I+ A +F+ + ++ +N++I +++G + + LF +K G PD TF
Sbjct: 375 CGV---IEKALDVFDGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTF 431
Query: 104 APLLKACLGVGDLRVG-----QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+L AC +G +R G V I E +G + V+L G +D + +
Sbjct: 432 VGILSACTHMGLVRNGLLHFQSMVDDYSIVPQIEHYGCM----VDLLGRAGLIDKAVDIV 487
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW----------NLMISSLG 208
+M V + G C+ +Y EM E ++ +M+S++
Sbjct: 488 RKMPMEPDAVIWAALLGACR-------MYKNVEMAELALQRLIELEPNNPGNFVMVSNIY 540
Query: 209 KS-GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS----YAESSGL 263
K GR + RL MRD F +P C+ +G D +S + E+ +
Sbjct: 541 KDLGRSQDVARLKVAMRDTGFRK--------VPGCSVIGCNDSMVEFYSLDERHPETDSI 592
Query: 264 YRKV 267
YR +
Sbjct: 593 YRAL 596
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/489 (37%), Positives = 290/489 (59%), Gaps = 29/489 (5%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN----EIKYATKIFNQMRNPSVLLFN 69
T L+QIHA F++ + L A + C T + ++ YA KIFNQM + +N
Sbjct: 28 TIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 87
Query: 70 SMIKAYSLNGPSEEPVKLFA------LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++I+ +S S+E L A ++ + I P+ +TF +LKAC G ++ G+ +H
Sbjct: 88 TIIRGFS---ESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIH 144
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF------DEM------SHRD--VIVR 169
G ++ GF + +V +Y CG M D +F EM RD V++
Sbjct: 145 GLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLW 204
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAF 228
N+MI G+ + GD LF +MR+RSVVSWN MIS ++G +A+ +F EM+ +
Sbjct: 205 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDI 264
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ T+V+VLP +RLG++++G+W+H YAE SG+ V +G+AL+D Y KCGI++ A
Sbjct: 265 RPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKAI 323
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF+ +PR+NV++W+AMI+G A +G+ ++ + +M GV P+ ++ +LT C+HAG
Sbjct: 324 MVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAG 383
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVE+ R F+ M + + P +EHYGCMVD+LGR G + EA + I +M I+P+ IW +L
Sbjct: 384 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKAL 443
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L +CR H +VE+ + L+++ P +SG YV LSN+YA G W + +R+ M+E +++
Sbjct: 444 LGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIR 503
Query: 469 KSPGQSLIE 477
K PG S I+
Sbjct: 504 KDPGCSWID 512
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 274/494 (55%), Gaps = 33/494 (6%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
T +IH HFL++ + + +L + + N++ A ++F+++ NPSV+L+N +I+AY
Sbjct: 25 TEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAY 84
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ NGP + + L+ + +LG+ P++YT+ +LKAC G+ + G +H G E
Sbjct: 85 AWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDV 144
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE- 194
+ +V+ Y CG + + ++F MSHRDV+ N MI G G D + L +M+E
Sbjct: 145 FVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEE 204
Query: 195 -------------------------------RSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+ VSW+ MI S EAL +F M
Sbjct: 205 GICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMM 264
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D T++ VLP C+ L A+ G H Y G + + NAL+D Y KCG
Sbjct: 265 QLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL-ICNALIDMYSKCGK 323
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ AR VF + R ++VSWNAMI G +G G + L+ ++A G+ P+ TF+ +L+
Sbjct: 324 ISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+GLV + R F +M+ SIVP +EH CMVD+LGR+G + EA+ IR+M P+
Sbjct: 384 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVR 443
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW +LLS+CR H ++EL E K++ +L P ++GN+VLLSNIY+ GRWDDA +R+ +
Sbjct: 444 IWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQK 503
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 504 DWGLKKIPGCSWIE 517
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 145/310 (46%), Gaps = 43/310 (13%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL+AC+ L + +H +++ S+ + LY SC Q+ ++FDE+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
VI+ N +I + +WN G A+ L+H M
Sbjct: 74 VILWNQIIRAY----------------------AWN---------GPFDGAIDLYHSMLH 102
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
++ T VL C+ L A++ G IHS+A+ GL V V ALVDFY KCGIL
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVF-VCTALVDFYAKCGILV 161
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A+ +F + ++VV+WNAMI+G + G + V+L QM +G+ PN +T VGVL C
Sbjct: 162 EAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ 221
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNA 402
+ AR++F M V N + M+ S C++EA D+ R M I P+
Sbjct: 222 ---CLLYARKIFDVMG-----VRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDL 273
Query: 403 AIWGSLLSSC 412
+L +C
Sbjct: 274 TTMLGVLPAC 283
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 281/481 (58%), Gaps = 9/481 (1%)
Query: 5 ILRLLHGRNTRTHLTQ---IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+ LL+ NT L + IH+H L ++ +++ N ++ A +IF++M
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMS 320
Query: 62 NPSVLLFNSMIKAYSLNG--PSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDL 116
V+ +++MI Y+ +G E ++F LL+ + G++P++ TF +L+AC G L
Sbjct: 321 KRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGAL 380
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G+ +H E+ + GFE S++ + +Y CG + + +VF +M++++V+ + +
Sbjct: 381 EQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMY 440
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K GD+ +F EM R+VVSWNLMI+ ++G + L M+ + F+ D TV+
Sbjct: 441 IKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVI 500
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+L C L ++ G+ +H+ A GL V V +L+ Y KCG + AR VF ++
Sbjct: 501 TILEACGALAGLERGKLVHAEAVKLGLESDTV-VATSLIGMYSKCGQVAEARTVFDKMSN 559
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++ V+WNAM++G +G G V+L+++M+ + VSPN+ T V++ C+ AGLV++ RE+
Sbjct: 560 RDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI 619
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + P +HYGCMVD+LGR+G ++EA + I+SM P+ ++W +LL +C++H
Sbjct: 620 FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHN 679
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+V+LAE A ++ LEP + Y+ LSNIYA+ GRWDD+ +R M + +KK G+S I
Sbjct: 680 NVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739
Query: 477 E 477
E
Sbjct: 740 E 740
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 197/426 (46%), Gaps = 53/426 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
++ A ++F +M V+ ++SMI AY+ N + F + + I P+ TF +
Sbjct: 104 FEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSI 163
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
LKAC L G+ +H + G E ++ ++ +Y+ CG++ +VF +M+ R+
Sbjct: 164 LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERN- 222
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
VVSW +I + + + +EA L+ +M
Sbjct: 223 ------------------------------VVSWTAIIQANAQHRKLNEAFELYEQMLQA 252
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ T V++L C A++ G+ IHS+ GL ++ V NAL+ YCKC +
Sbjct: 253 GISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI-VANALITMYCKCNSVQE 311
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELG-----VELYEQMIAKGVSPNKATFVGVL 341
AR +F + +++V+SW+AMI+G A +G + +L E+M +GV PNK TF+ +L
Sbjct: 312 AREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C G +E+ R++ A ++ + + + ++ + G + EA + M+ N
Sbjct: 372 RACTAHGALEQGRQIHAELSKV-GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKN 429
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWN--------SGNYV----LLSNIYA 447
W S LS G + AE E+ N+ WN +G+ V LLS++ A
Sbjct: 430 VVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKA 489
Query: 448 EGGRWD 453
EG + D
Sbjct: 490 EGFQPD 495
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 189/402 (47%), Gaps = 23/402 (5%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
S CG EI A ++F++M +V+ + ++I+A + + E +L+ + GI P+
Sbjct: 203 SKCG---EISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAV 259
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
TF LL +C L G+ +H I G E + ++ +Y C + + ++FD M
Sbjct: 260 TFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 162 SHRDVIVRNLMIHGFCKKG-----DVDKGLYLFREMRERSV----VSWNLMISSLGKSGR 212
S RDVI + MI G+ + G +D+ L MR V V++ ++ + G
Sbjct: 320 SKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA 379
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
+ ++ E+ FELD + A+ + A+ G++ + + S + K V
Sbjct: 380 LEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVF-----SKMANKNVVAWT 434
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+ + Y KCG L +A VF E+P +NVVSWN MI+G A NG EL M A+G P
Sbjct: 435 SFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQP 494
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
++ T + +L C +E+ + + A L + + ++ + + G V EA +
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKL-GLESDTVVATSLIGMYSKCGQVAEARTV 553
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH----VELAEHAVKELIN 430
MS R A W ++L+ HG V+L + +KE ++
Sbjct: 554 FDKMSNRDTVA-WNAMLAGYGQHGDGLEAVDLFKRMLKERVS 594
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 180/434 (41%), Gaps = 83/434 (19%)
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G E ++L ++K G+ + T+ +++ C G+ VH ++ G E
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEI----- 89
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
D+ + N +I+ + K DV +FR M R VV
Sbjct: 90 --------------------------DIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVV 123
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+W+ MI++ + ++A F M D E + T +++L C ++ G+ IH+
Sbjct: 124 TWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIV 183
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
++ G+ V +V AL+ Y KCG + A VF ++ +NVVSW A+I A + +
Sbjct: 184 KAMGMETDV-AVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEA 242
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCC----------------AHAGL------------- 349
ELYEQM+ G+SPN TFV +L C + GL
Sbjct: 243 FELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITM 302
Query: 350 ------VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG-----CVREAYDLIRSM-- 396
V++ARE+F M+ I + M+ +SG + E + L+ M
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVI-----SWSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 397 -SIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSGNYVLLSNIYAEGGRWD 453
+ PN + S+L +C HG +E EL + E S + N+YA+ G
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIF-NMYAKCGSIY 416
Query: 454 DAETLRMWMRENNV 467
+AE + M NV
Sbjct: 417 EAEQVFSKMANKNV 430
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 34/241 (14%)
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
L K+GR EA++L ++ + ++ T V+ CA+ + G+ +H + G+
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ +GN+L++FY K + +A VF+ + ++VV+W++MI+ A N + +E+M
Sbjct: 91 IY-LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMT 149
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVP---------------- 368
+ PN+ TF+ +L C + ++EK R++ G+ + V
Sbjct: 150 DANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209
Query: 369 ------------NLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCR 413
N+ + ++ + + EA++L M I PNA + SLL+SC
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269
Query: 414 T 414
T
Sbjct: 270 T 270
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 258/425 (60%), Gaps = 1/425 (0%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ + + +++ +NSMI YS G +E + LF + LG+ D +T LL A
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSK 250
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+L +G+ VH I+ +G E + ++++Y CG + VFD+M +DV+ M
Sbjct: 251 HCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSM 310
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
++ + +G V+ + +F M ++VVSWN +I L + G+ +EA+ LFH M D+
Sbjct: 311 VNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDD 370
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
AT+V++L C+ G + +G+ H Y + V++ N+L+D Y KCG L TA ++F
Sbjct: 371 ATLVSILSCCSNTGDLALGKQAHCYI-CDNIITVSVTLCNSLIDMYAKCGALQTAIDIFF 429
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P KNVVSWN +I LA +G GE +E+++ M A G+ P++ TF G+L+ C+H+GLV+
Sbjct: 430 GMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDM 489
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R F M I P +EHY CMVD+LGR G + EA LI+ M ++P+ +WG+LL +C
Sbjct: 490 GRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGAC 549
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R +G++E+A+ +K+L+ L +NSG YVLLSN+Y+E RWDD + +R M ++ +KK
Sbjct: 550 RIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRA 609
Query: 473 QSLIE 477
S IE
Sbjct: 610 ISFIE 614
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/517 (24%), Positives = 225/517 (43%), Gaps = 98/517 (18%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LL ++ L +HA + H L + L +S+C +++YA +F+Q+ P+ +
Sbjct: 45 LLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFM 104
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N +I+ YS + + + LF + + G P+++TF +LKAC VH + I
Sbjct: 105 YNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAI 164
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ G ++ ++ Y +C + +VFD++S R ++ N MI G+ K G D+ +
Sbjct: 165 KLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAIL 224
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF+EM + V E D T+V++L ++
Sbjct: 225 LFQEMLQLGV-------------------------------EADVFTLVSLLSASSKHCN 253
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE-------------- 293
+D+G+++H Y +G+ + V NAL+D Y KCG L A++VF +
Sbjct: 254 LDLGRFVHLYIVITGVEIDSI-VTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVN 312
Query: 294 -----------------IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+P KNVVSWN++I L G+ VEL+ +M GV P+ AT
Sbjct: 313 AYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDAT 372
Query: 337 FVGVLTCCAHAG----------------------LVEKARELFASMTGLHSIV------- 367
V +L+CC++ G L +++A L + +
Sbjct: 373 LVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP 432
Query: 368 -PNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEH 423
N+ + ++ L G EA ++ +SM + P+ + LLS+C G V++ +
Sbjct: 433 EKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRY 492
Query: 424 AVKELINLEPWNSG--NYVLLSNIYAEGGRWDDAETL 458
+I+ + G +Y + ++ GG +A TL
Sbjct: 493 YFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTL 529
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L + A IF M +V+ +N +I A +L+G EE +++F ++ G++PDE TF
Sbjct: 418 CGAL---QTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITF 474
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRS-----GFERFGSIRIGVVELYTSCGQMDDGMKVF 158
LL AC G + +G+ +I + G E + + V+L G + + M +
Sbjct: 475 TGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACM----VDLLGRGGFLGEAMTLI 530
Query: 159 DEMSHR-DVIVRNLMIHGFCK-KGDVDKGLYLFREMRE 194
+M + DV+V ++ G C+ G+++ + +++ E
Sbjct: 531 QKMPVKPDVVVWGALL-GACRIYGNLEIAKQIMKQLLE 567
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 266/452 (58%), Gaps = 13/452 (2%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRN-PSVLLFNSMIKAYSLNGPSEEPVKLF--AL 90
N+I F+ V + ++++ IFN + P++ +N+++KA+S + + F L
Sbjct: 58 NIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQL 117
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ PDEYTF +LKAC G+ + GQ VH + + G E +R +V+LY G
Sbjct: 118 VLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGC 177
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
K+FDEM RDV+ N +I G+C G VDK +F M E+++VSW+ MIS ++
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARN 237
Query: 211 GRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESS----GLYR 265
+ ++A+ LF +M+ + ++ T+V+VL CA LGA+D+G+WIH + + GL+
Sbjct: 238 EKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF- 296
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+GNAL D Y KCG + A+ VF E+ ++V+SW+ +I GLA G + +M
Sbjct: 297 ----LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEM 352
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
I G+ PN +F+G+LT C HAGLV+K E F M ++ I P +EHYGC+VD+L R+G
Sbjct: 353 IEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGR 412
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ +A LI SM ++PN +WG+LL CR + E E V ++ L+ +SG+ V L+N+
Sbjct: 413 LDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANV 472
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA GR DDA + R+ MR+N K+PG S IE
Sbjct: 473 YASMGRLDDAASCRLRMRDNKSMKTPGCSWIE 504
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 269/476 (56%), Gaps = 28/476 (5%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+++I+ LL + IHA +R+ Q ++ + C + I YA++IF
Sbjct: 32 QKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTH 91
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP+V L+ ++I + +G + ++L++ + + I PD Y A +LKAC LR G+
Sbjct: 92 NPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGRE 151
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH ++ G +R+ ++ELY CG++ D +VF+EM DV+ ++
Sbjct: 152 VHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVAKD----------- 199
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V W MI ++ + AL F M+ + +E T+V VL
Sbjct: 200 ---------------TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSA 244
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C++LGA++IG+W+HSY + + VGNAL++ Y +CG +D A+ VF E+ ++V++
Sbjct: 245 CSQLGALEIGRWVHSYMRKFEIELNLF-VGNALINMYSRCGSIDEAQTVFDEMKDRDVIT 303
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+N MISGL+ NG+ +EL+ MI + + P TFVGVL C+H GLV+ ++F SMT
Sbjct: 304 YNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMT 363
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + P +EHYGCMVD+LGR G + EAYDLIR+M + P+ + G+LLS+C+ H ++EL
Sbjct: 364 RDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELG 423
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E K L + +SG YVLLS++YA G+W +A +R M+E ++K PG S IE
Sbjct: 424 EQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIE 479
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 256/434 (58%), Gaps = 4/434 (0%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +++ A KIF++ + +++L+N+++ Y G + E + + + G PD T
Sbjct: 288 CGAIDK---ARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITM 344
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+ AC + D+ G+ HG ++R+G E + ++ ++ +Y CG+ + +VFD M +
Sbjct: 345 LSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLN 404
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ + N +I GF + GD++ +F M + +VSWN MI +L + EA+ LF M
Sbjct: 405 KTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVM 464
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D+ T+V V C LGA+D+ +WIH Y + ++ + +G ALVD + +CG
Sbjct: 465 QSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFD-MHLGTALVDMFARCGD 523
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+A VF ++ +++V +W A I +A G G +EL+++M+ +G+ P+ FV +LT
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
+H GLVE+ +F SM ++ I P HYGCMVD+LGR+G + EA LI SM + PN
Sbjct: 584 LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWGSLL++CR H +V++A +A + + L+P +G +VLLSNIYA GRWDD +R+ ++
Sbjct: 644 IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLK 703
Query: 464 ENNVKKSPGQSLIE 477
E K PG S IE
Sbjct: 704 EKGAHKMPGSSSIE 717
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 159/340 (46%), Gaps = 40/340 (11%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLL--- 67
T T L Q+H+ ++ L+ L L + +S C GT ++YA K + ++
Sbjct: 45 TMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTH 104
Query: 68 --FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
F+S+I+ +S G + + +F L +G PD +TF +L AC L G VHG
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I++ GFER + ++ Y CG++D +VFD+MS R+V+ +I G+ K+G
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCY--- 221
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
EA+ LF EM + + T+V V+ CA+L
Sbjct: 222 ----------------------------KEAVSLFFEMVEVGIRPNSVTMVGVISACAKL 253
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+ +G+ + + L + V NALVD Y KCG +D AR +F E KN+V +N +
Sbjct: 254 QDLQLGEQVCTCIGELELEVNALMV-NALVDMYMKCGAIDKARKIFDECVDKNLVLYNTI 312
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+S G + + +M+ G P++ T + ++ C+
Sbjct: 313 MSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACS 352
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 188/432 (43%), Gaps = 71/432 (16%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H ++ + + L HF CG EI ++F++M +V+ + S+I Y+
Sbjct: 160 QVHGAIVKMGFERDMFVENSLIHFYGECG---EIDCMRRVFDKMSERNVVSWTSLIGGYA 216
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G +E V LF + +GI P+ T ++ AC + DL++G+ V
Sbjct: 217 KRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV-------------C 263
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
IG +EL + ++ N ++ + K G +DK +F E +++
Sbjct: 264 TCIGELELEV------------------NALMVNALVDMYMKCGAIDKARKIFDECVDKN 305
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V +N ++S+ + G E L + EM D T+++ + C+ L V G+W H
Sbjct: 306 LVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHG 365
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y +GL +V NA+++ Y KCG + A VF + K VSWN++I+G NG E
Sbjct: 366 YVLRNGL-EGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDME 424
Query: 317 L-------------------------------GVELYEQMIAKGVSPNKATFVGVLTCCA 345
+EL+ M ++G++ +K T VGV + C
Sbjct: 425 SAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACG 484
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+ G ++ A+ + + I ++ +VD+ R G + A + M ++ + + W
Sbjct: 485 YLGALDLAKWIHGYIKK-KDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAW 542
Query: 406 GSLLSSCRTHGH 417
+ + + G+
Sbjct: 543 TAAIGAMAMEGN 554
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 129/320 (40%), Gaps = 65/320 (20%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H + LR+ L + + +++ + + A ++F++M N + + +NS+I + NG
Sbjct: 364 HGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDM 423
Query: 82 E-------------------------------EPVKLFALLKNLGIWPDEYTFAPLLKAC 110
E E ++LF ++++ GI D+ T + AC
Sbjct: 424 ESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASAC 483
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+G L + + +HG I + + +V+++ CG M+VF++M RD
Sbjct: 484 GYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRD----- 538
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
V +W I ++ G + A+ LF EM Q +
Sbjct: 539 --------------------------VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKP 572
Query: 231 DEATVVAVLPICARLGAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
D VA+L + G V+ G I S + G+ + V G +VD + G+L A +
Sbjct: 573 DGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYG-CMVDLLGRAGLLSEALS 631
Query: 290 VFKEIPRK-NVVSWNAMISG 308
+ + + N V W ++++
Sbjct: 632 LINSMQMEPNDVIWGSLLAA 651
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 159/455 (34%), Positives = 273/455 (60%), Gaps = 3/455 (0%)
Query: 25 FLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEE 83
F+R + ++L+++ V + N I A ++F++ ++ L N+M Y G ++E
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
+ + L+ + GI PD + + +C + ++ G+ HG ++R+GFE + +I +++
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
+Y C + D ++FD MS++ V+ N ++ G+ + G+VD F M E+++VSWN +
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439
Query: 204 ISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
IS+L + EA+ +FH M+ Q +D T++++ C LGA+D+ +WI+ Y E +
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ V +G LVD + +CG ++A ++F + ++V +W A I +A G E +EL+
Sbjct: 500 IQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELF 558
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
+MI +G+ P+ F+G LT C H GLV++ +E+F SM LH + P HYGCMVD+LGR
Sbjct: 559 NEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGR 618
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
+G + EA LI+ M PN IW SLL++CR G+VE+A A +++ L P +G+YVLL
Sbjct: 619 AGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLL 678
Query: 443 SNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SN+YA GRW+D +R+ M+E ++K PG S+I+
Sbjct: 679 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQ 713
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 143/304 (47%), Gaps = 34/304 (11%)
Query: 45 GTLNEIKYATKIF-NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
GT + +A ++F N + ++NS+I+ Y+ +G +E + LF + N GI PD+YTF
Sbjct: 77 GTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTF 136
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L C D G +HG II+ + + ++ +V Y CG++D KVFDEMS
Sbjct: 137 PFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSE 196
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V VSW MI + +A+ LF M
Sbjct: 197 RNV-------------------------------VSWTSMICGYARREFAKDAVDLFFRM 225
Query: 224 -RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
RD+ + T+V V+ CA+L ++ G+ ++ + SG+ + + +ALVD Y KC
Sbjct: 226 VRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI-SALVDMYMKCN 284
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+D A+ +F E N+ NAM S G + + + M+ G+ P++ + + ++
Sbjct: 285 AIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAIS 344
Query: 343 CCAH 346
C+
Sbjct: 345 SCSQ 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 193/446 (43%), Gaps = 73/446 (16%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIH ++ + + L HF + CG E+ A K+F++M +V+ + SMI Y+
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECG---ELDCARKVFDEMSERNVVSWTSMICGYA 210
Query: 77 LNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+++ V LF ++++ + P+ T ++ AC + DL G+ V+ I SG E
Sbjct: 211 RREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVND 270
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y C +D ++FDE ++ + N M + ++G
Sbjct: 271 LMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQG--------------- 315
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
L K EAL + + M D D ++++ + C++L + G+ H
Sbjct: 316 -----------LTK-----EALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCH 359
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GIL 284
Y +G + ++ NAL+D Y KC G +
Sbjct: 360 GYVLRNG-FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEV 418
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTC 343
D A F +P KN+VSWN +IS L E +E++ M ++ V+ + T + + +
Sbjct: 419 DAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASA 478
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H G ++ A+ ++ + + I ++ +VD+ R G A + S++ R +A
Sbjct: 479 CGHLGALDLAKWIYYYIEK-NRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 537
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELI 429
W + + + G+VE A E+I
Sbjct: 538 -WTAAIGAMAMAGNVERAIELFNEMI 562
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N +I SG EA+ LF M + D+ T L +CA+ G IH
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
Y K + V N+LV FY +CG LD AR VF E+ +NVVSW +MI G A + V
Sbjct: 161 KMD-YAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAV 219
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+L+ +M+ + V PN T V V++ CA +E +++
Sbjct: 220 DLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVY 258
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 323 bits (829), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 283/515 (54%), Gaps = 42/515 (8%)
Query: 5 ILRLLHGRNTRTH---LTQIHAHFLRHKLHQS-----NLILAHFVSVCG---TLNEIKYA 53
++R GR+T T+ L QIHA + + L + L+L +S+ G T I+YA
Sbjct: 1 MIRKRRGRSTITNVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYA 60
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
++F Q+ P ++N+ I+ S + V L+A + + PD +TF +LKAC +
Sbjct: 61 LQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKL 120
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ G VHG ++R GF +R ++ + CG + +FD+ DV+ + +I
Sbjct: 121 FWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALI 180
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE--MRD------ 225
G+ ++GD+ LF EM +R +VSWN+MI+ K G A RLF E M+D
Sbjct: 181 AGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNA 240
Query: 226 ------------QAFEL-----------DEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
+A EL DE T++++L CA LG ++ G+ +H+
Sbjct: 241 LIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMN 300
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ +GNALVD Y KCG + A VF I K+VVSWN++ISGLAF+G E + L+
Sbjct: 301 KGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLF 360
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
+M V P++ TFVGVL C+HAG V++ F M + I P + H GC+VD+LGR
Sbjct: 361 REMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGR 420
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
+G ++EA++ I SM I PNA +W SLL +C+ HG VELA+ A ++L+ + SG+YVLL
Sbjct: 421 AGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLL 480
Query: 443 SNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SN+YA G WD AE +R M +N V K+ G S +E
Sbjct: 481 SNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFVE 515
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 287/541 (53%), Gaps = 66/541 (12%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E+KI L H ++ + QIHA L+ LH+ + + ++ ++ A +FNQ+
Sbjct: 17 LEQKISDL-HRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQI 75
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++P VLL+N++I+A+ N +F +++ G+ D +T+ LLKAC G +RV +
Sbjct: 76 QDPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVE 135
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSC-------------------------------- 148
+H ++ + GF + +++ Y C
Sbjct: 136 MIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVK 195
Query: 149 -GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM---- 203
G++ + ++FDEM RD + N ++ G+ K G+++ LF +M R+VVSW+ M
Sbjct: 196 VGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGY 255
Query: 204 ---------------------------ISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
IS + G +A+ L+++M + + D+ TV+
Sbjct: 256 SKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVI 315
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++L CA G + +G+ +H+ E + ++ V NAL+D Y KCG L+ A ++F + R
Sbjct: 316 SILSACAVSGLLGLGKRVHASIERT-RFKCSTPVSNALIDMYAKCGSLENALSIFHGMVR 374
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+VVSWNA+I GLA +G GE ++L+ +M +G P+K TFVGVL C HAG V++
Sbjct: 375 KDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHY 434
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F +M + + P +EHYGCMVD+LGR G ++EA+ L+ SM + PNA IWG+LL +CR H
Sbjct: 435 FHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHS 494
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LAE L+ E +SGN +LSNIYA G WD+ +R+ M+ +++K G S I
Sbjct: 495 ATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSI 554
Query: 477 E 477
E
Sbjct: 555 E 555
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 285/482 (59%), Gaps = 11/482 (2%)
Query: 3 RKILRLLHGRN-TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN---EIKYATKIFN 58
+K + LL + T + L QI +H + A +S+ N + YA ++F
Sbjct: 11 KKTISLLDQKGLTISQLKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFL 70
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGD 115
++N S ++N+M++A+ E V+ F+L K++ P+ +TF+ +++AC+ V +
Sbjct: 71 CLQNKSTFIWNTMMQAFV---EKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFN 127
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
L++G C HG++++ G+E + ++ G++ LY +CG MD +FD RDV+ +I G
Sbjct: 128 LQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISG 187
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ G V LF M E++ VSW +I+ + G EAL +F++M+ F L+ A++
Sbjct: 188 YLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASI 247
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V L CA LGA+D G+WIH+Y + + + +G AL+D Y KCG ++ A +VF E+
Sbjct: 248 VGALTACAFLGALDQGRWIHAYVKRHHMSLDRM-LGTALIDMYAKCGCIEMACSVFDEMD 306
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++V ++ +ISGLA + + E ++L+ +M +GV PN+ TFV VL C+ G+V++
Sbjct: 307 DRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLR 366
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+F SM+ + I P ++HYGC+VD+LGR+G + EA ++R M ++P++ G+LL +CR H
Sbjct: 367 IFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVH 426
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G V+L E V L+ + G +VLLSN+YA +W+DA +R M + N++K PG S
Sbjct: 427 GDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSS 486
Query: 476 IE 477
IE
Sbjct: 487 IE 488
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 270/479 (56%), Gaps = 21/479 (4%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
HL Q+ + H Q+ V C TL ++ YA IF+ + +P+V L+ +MI A
Sbjct: 57 NHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMITA 116
Query: 75 YSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
Y+ +P F L +N+ I P+ + + +L++C V + VH ++++SG
Sbjct: 117 YA---SYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSG 173
Query: 131 FERFGSIRIGVVELYTS-CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
F + ++ +V+ Y+ + ++FDEM R V+ MI G+ + G+ D + LF
Sbjct: 174 FGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAIELF 233
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEM---------RDQAFELDEATVVAVLP 240
M ER V +WN +I+ ++G EA+ LF M D+ + ++ T+ + L
Sbjct: 234 ESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALS 293
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C G + +G+WIH Y + + + NAL+D Y KCG L AR VF I KN+
Sbjct: 294 ACGHTGMLHLGKWIHGYVFKTYPGQDSF-ISNALLDMYGKCGNLKVARRVFDMITLKNLT 352
Query: 301 SWNAMISGLAFNGRGELGVELYEQMI--AKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
SWN++I+ LA +G ++L+ ++I GV PN+ TFVGVL C H GLVEK F
Sbjct: 353 SWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFE 412
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M + I P +EH+GC++D+LGR+G EA +++R M+I P+ +WGSLL++C+ HG
Sbjct: 413 MMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRS 472
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LAE++VK+LI ++P N G ++L+NIYAE G+WD+ +R ++E N K+PG S IE
Sbjct: 473 DLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIE 531
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 271/482 (56%), Gaps = 12/482 (2%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMR 61
+L G N Q+H+ + I L S CG +N+ A ++F++M
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND---AQRVFDEMG 214
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ +V+ +NS+I + NGP+ E + +F ++ + PDE T A ++ AC + ++VGQ
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 122 VHGEIIRSGFERFGSI-RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VHG ++++ R I V++Y C ++ + +FD M R+VI MI G+
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+F +M ER+VVSWN +I+ ++G + EAL LF ++ ++ + +L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIP 295
CA L + +G H + G + + VGN+L+D Y KCG ++ VF+++
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++ VSWNAMI G A NG G +EL+ +M+ G P+ T +GVL+ C HAG VE+ R
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F+SMT + P +HY CMVD+LGR+G + EA +I M ++P++ IWGSLL++C+ H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
++ L ++ ++L+ +EP NSG YVLLSN+YAE G+W+D +R MR+ V K PG S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 476 IE 477
I+
Sbjct: 635 IK 636
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 12/385 (3%)
Query: 87 LFALLKNLGIWPDEYTFAPLLKACLG--VGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
L +L + D FA LL +C+ + + V + VH +I+SGF I+ +++
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y+ CG ++DG +VFD+M R++ N ++ G K G +D+ LFR M ER +WN M+
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S + R EAL F M + F L+E + +VL C+ L ++ G +HS S
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
V +G+ALVD Y KCG ++ A+ VF E+ +NVVSWN++I+ NG +++++
Sbjct: 185 SDVY-IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M+ V P++ T V++ CA ++ +E+ + + ++ VD+ +
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLL 442
++EA + SM IR N S++S + A ++ N+ WN+ L
Sbjct: 304 RIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA-----L 357
Query: 443 SNIYAEGGRWDDAETLRMWMRENNV 467
Y + G ++A +L ++ +V
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESV 382
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 178/421 (42%), Gaps = 71/421 (16%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A +F M +NSM+ ++ + EE + FA++ G +EY+FA
Sbjct: 100 GFLDE---ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC G+ D+ G VH I +S F I +V++Y+ CG ++D +VFDEM R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+V+ N +I F ++G EAL +F M
Sbjct: 217 NVVSWNSLITCF-------------------------------EQNGPAVEALDVFQMML 245
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ E DE T+ +V+ CA L A+ +GQ +H + R + + NA VD Y KC +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 285 DTARNVFKEIP-------------------------------RKNVVSWNAMISGLAFNG 313
AR +F +P +NVVSWNA+I+G NG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCA-----HAGLVEKARELFASMTGLHSIVP 368
E + L+ + + V P +F +L CA H G+ L
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ ++D+ + GCV E Y + R M R + W +++ +G+ A +E+
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 429 I 429
+
Sbjct: 485 L 485
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 286/506 (56%), Gaps = 45/506 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQS-----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
+N RT L QIHA + + L + LI + +SV G L KYA K+F+++ P V
Sbjct: 23 KNIRT-LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGAL---KYAHKLFDEIPKPDVS 78
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ N +++ + + E+ V L+ ++ G+ PD YTF +LKAC + G HG++
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 127 IRSGFERFGSIRIGVVELYTSC-------------------------------GQMDDGM 155
+R GF ++ ++ + +C G++D+ M
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FDEM ++D + N+MI G K ++D LF E+ VV+WN MIS G E
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG---- 271
AL +F EMRD D T++++L CA LG ++ G+ +H Y + + VG
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+D Y KCG +D A VF+ + +++ +WN +I GLA + E +E++E+M V
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVW 377
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN+ TF+GV+ C+H+G V++ R+ F+ M +++I PN++HYGCMVD+LGR+G + EA+
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+ SM I PNA +W +LL +C+ +G+VEL ++A ++L+++ SG+YVLLSNIYA G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WD + +R + VKK G SLIE
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIE 523
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 265/444 (59%), Gaps = 5/444 (1%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N IL +V+ CG + A ++F+ + +++ +NSMI YS G SEE V +F ++
Sbjct: 173 NAILNIYVA-CGLITS---ARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQE 228
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+G+ PD +T LL G+ +G+ VH ++ +G E + ++++Y CG +
Sbjct: 229 VGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKC 288
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
VFD+M +DV+ MI+ + G +D L F +M ++VVSWN +I + G
Sbjct: 289 AKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLY 348
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+EA+ LF+ M D ++ T+VA+L C+ +G + +G+ HSY + + ++ NA
Sbjct: 349 AEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSA-TLCNA 407
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
++D Y KCG L TA +VF +P KN VSWN +I LA +G G+ +E++E+M A GV P+
Sbjct: 408 IIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPD 467
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TF G+L+ C+H+GLV+ + F M I P++EHY CMVD+LGR G + EA LI
Sbjct: 468 EITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLI 527
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M ++P+ +W +LL +CRT+G++ + + +K+L+ L +NSG YVLLSN+Y+E RWD
Sbjct: 528 KKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWD 587
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
D + + + +N +KK S IE
Sbjct: 588 DMKNIWKILDQNGIKKCRAISFIE 611
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 79/439 (17%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L +HA + H L L L VS L +++YA K+F+Q+ P+ +FN +IK YS
Sbjct: 51 QLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYS 110
Query: 77 LNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
S +P+K L + + GI P+++T +LKAC +G CVH + + G
Sbjct: 111 ---NSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGS 167
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
++ ++ +Y +CG + +VFD++S R ++ N MI+G+ K G ++ + +FREM+
Sbjct: 168 HACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQ 227
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E E D T+V +L + + G D+G++
Sbjct: 228 EV-------------------------------GLEPDVFTLVGLLSVSTKHGNFDLGRF 256
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+H + +G+ + V NAL+D Y KCG L A++VF ++ K+VVSW MI+ A +G
Sbjct: 257 VHLHMVVTGIEIDSI-VTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHG 315
Query: 314 RGELGVELYEQMIAK-------------------------------GVSPNKATFVGVLT 342
+ +E + QM K GV N T V +L+
Sbjct: 316 LIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILS 375
Query: 343 CCAHAGLVEKARE----LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
C+H G + ++ +F + L + + N ++D+ + G ++ A D+ M
Sbjct: 376 SCSHMGDLALGKQAHSYIFDNNITLSATLCN-----AIIDMYAKCGALQTAMDVFFGMP- 429
Query: 399 RPNAAIWGSLLSSCRTHGH 417
NA W ++ + HG+
Sbjct: 430 EKNAVSWNVIIGALALHGY 448
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q H++ + + S + + + ++ A +F M + + +N +I A +L+G
Sbjct: 388 QAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+E +++F ++ G+ PDE TF LL AC G + GQ
Sbjct: 448 YGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQ 488
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 268/465 (57%), Gaps = 6/465 (1%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+QIH+ R + + V + ++YA +F++M S + +NS+I Y N
Sbjct: 171 SQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQN 230
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSI 137
GP +E +K+F + G+ PDE T A ++ AC + ++ GQ +H +++ F +
Sbjct: 231 GPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLIL 290
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y C ++++ +FD M R V+ M+ G+ K V Y+F M + V
Sbjct: 291 GNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDV 350
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
++WN +I+ ++G + EAL LF ++ ++ T +L CA L + +G+ HS+
Sbjct: 351 ITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSH 410
Query: 258 AESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
G + V VGN+L+D Y KCG ++ VF+ + K+ VSWNAMI G A N
Sbjct: 411 VLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQN 470
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G +E++ +M+ G +P+ T +GVL C+HAGL+++ R F SMT H ++P +H
Sbjct: 471 GFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDH 530
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y CMVD+LGR+G + EA +LI MS++P+A +WGSLL++C+ H +++L E+ VK+L+ ++
Sbjct: 531 YTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVD 590
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P NSG YVLLSN+YAE W + +R MR+ V K PG S IE
Sbjct: 591 PENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIE 635
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 176/348 (50%), Gaps = 4/348 (1%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
LK ++ D F+ LL C R VH II+S F I+ ++++Y CG
Sbjct: 10 LKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGC 69
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+D K+FD M R++ N +I F K G +D +++F +M + SWN MIS +
Sbjct: 70 VDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQH 129
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
GR EAL F +M F ++E + + L CA L + +G IHS S Y V +
Sbjct: 130 GRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSN-YLSDVYM 188
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G+ALVD Y KCG ++ A++VF E+ ++ VSWN++I+ NG + ++++ +MI GV
Sbjct: 189 GSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGV 248
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P++ T V++ CA +++ +++ A + +L ++D+ + + EA
Sbjct: 249 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 308
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNS 436
+ M IR + S++S V++A + ++ ++ WN+
Sbjct: 309 IIFDMMPIR-SVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNA 355
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 163/372 (43%), Gaps = 68/372 (18%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A IF +M +NSMI + +G +E + FA + G +EY+F L AC G
Sbjct: 104 AVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAG 163
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL++G +H + RS + + +V++Y+ CG+++ VFDEM+ R + N +
Sbjct: 164 LQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSL 223
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + + G VD EAL++F EM E DE
Sbjct: 224 ITCYEQNGPVD-------------------------------EALKIFVEMIKCGVEPDE 252
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ +V+ CA + A+ GQ IH+ +R + +GNAL+D Y KC ++ AR +F
Sbjct: 253 VTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFD 312
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P ++VVS +M+SG A + ++ ++ M+ K V A G C G E+
Sbjct: 313 MMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAG----CTQNGENEE 368
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
A LF L++ S+ P +G+LL++C
Sbjct: 369 ALILFR---------------------------------LLKRESVWPTHYTFGNLLNAC 395
Query: 413 RTHGHVELAEHA 424
++L A
Sbjct: 396 ANLADLQLGRQA 407
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/457 (37%), Positives = 252/457 (55%), Gaps = 32/457 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH + +R + L++ V++ + A K+F +M V +N++I YSLN
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS 301
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + F ++ GI P+ T +L AC + L GQ +HG IRSGFE
Sbjct: 302 QHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFES------ 355
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+ +V N +++ + K G+V+ LF M +++VV+
Sbjct: 356 -------------------------NDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA 390
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +IS + G EAL LF EM+ Q + D +V+VLP CA A++ G+ IH Y
Sbjct: 391 WNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SG VV VG LVD Y KCG ++TA+ +F+ +P ++VVSW MI +G GE +
Sbjct: 451 RSGFESNVV-VGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDAL 509
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ +M G + F +LT C+HAGLV++ + F M + + P LEHY C+VD+
Sbjct: 510 ALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDL 569
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + EA +I++MS+ P+A +WG+LL +CR H ++EL E A K L L+P N+G Y
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYY 629
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VLLSNIYAE RW+D LR M+E VKK PG S++
Sbjct: 630 VLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 195/381 (51%), Gaps = 48/381 (12%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
VS C N+ ++ +RN +V+ ++I Y NG + ++L+ ++ GI PD+
Sbjct: 67 VSACA--NQTQFTQ---TDIRNNAVVWKETII-GYVKNGFWNKALRLYYQMQRTGINPDK 120
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
F ++KAC DL+ G+ VH +II GFE + + +YT CG +++ +VFD
Sbjct: 121 LVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDR 180
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M RDV+ N +I G+ + G + EAL LF
Sbjct: 181 MPKRDVVSWNAIIAGYSQNG-------------------------------QPYEALALF 209
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
EM+ + + +T+V+V+P+CA L A++ G+ IH YA SG+ V+ V N LV+ Y K
Sbjct: 210 SEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV-NGLVNMYAK 268
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG ++TA +F+ +P ++V SWNA+I G + N + + + +M +G+ PN T V V
Sbjct: 269 CGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSV 328
Query: 341 LTCCAHAGLVEKAREL--FASMTGLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
L CAH +E+ +++ +A +G S +V N +V++ + G V AY L M
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGN-----ALVNMYAKCGNVNSAYKLFERM 383
Query: 397 SIRPNAAIWGSLLSSCRTHGH 417
+ N W +++S HGH
Sbjct: 384 P-KKNVVAWNAIISGYSQHGH 403
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 259/458 (56%), Gaps = 2/458 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H ++ L IL ++ G+ A ++F M V+ +N+MI A++L G
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
++ + LF ++ + P+ T +L AC DL G+ + I +GF +
Sbjct: 255 PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG ++D +F++MS +D++ M+ G K G+ D+ +F M + +W
Sbjct: 315 MLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAW 374
Query: 201 NLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
N +IS+ ++G+ AL LFHEM+ + + DE T++ L A+LGA+D G WIH Y +
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + +L+D Y KCG L+ A VF + RK+V W+AMI LA G+G+ +
Sbjct: 435 KHDINLNC-HLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAAL 493
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+ M+ + PN TF +L C HAGLV + +LF M L+ IVP ++HY C+VD+
Sbjct: 494 DLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDI 553
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + +A I M I P AA+WG+LL +C HG+VELAE A + L+ LEP N G +
Sbjct: 554 FGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAF 613
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNIYA+ G W+ LR MR+++VKK P S I+
Sbjct: 614 VLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSID 651
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 226/530 (42%), Gaps = 114/530 (21%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLR-----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
IL + L QIHAH LR S L+ A+ +S C L YA +FNQ
Sbjct: 75 ILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCL---IYAKNVFNQ 131
Query: 60 MRNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ P++ +N++I+ Y S + P++ + +L + +P+++TF L KA + L +
Sbjct: 132 IPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL 191
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G +HG +I++ I ++ Y S G D +VF M +DV+ N MI+ F
Sbjct: 192 GSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFAL 251
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G DK L LF+EM EM+D + + T+V+V
Sbjct: 252 GGLPDKALLLFQEM-----------------------------EMKD--VKPNVITMVSV 280
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+ ++ G+WI SY E++G ++ + NA++D Y KCG ++ A+++F ++ K+
Sbjct: 281 LSACAKKIDLEFGRWICSYIENNGFTEHLI-LNNAMLDMYVKCGCINDAKDLFNKMSEKD 339
Query: 299 VVS-------------------------------WNAMISGLAFNGRGELGVELYEQM-I 326
+VS WNA+IS NG+ + + L+ +M +
Sbjct: 340 IVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQL 399
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKAR---------------ELFASMTGLHSIVPNLE 371
+K P++ T + L A G ++ L S+ +++ NL
Sbjct: 400 SKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLN 459
Query: 372 H---------------YGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCR 413
+ M+ L G + A DL SM I+PNA + ++L +C
Sbjct: 460 KAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACN 519
Query: 414 THGHVELAEHAVKELINLEPW-----NSGNYVLLSNIYAEGGRWDDAETL 458
G V E ++ +EP +YV + +I+ G + A +
Sbjct: 520 HAGLVNEGEQLFEQ---MEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASF 566
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 271/481 (56%), Gaps = 5/481 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFN 58
++ + LL T + QIHA + + ++ FV + + YA +I +
Sbjct: 13 VKHPAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILD 72
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA--LLKNLGIWPDEYTFAPLLKACLGVGDL 116
+ P++ NSMI+A+ + E+ ++ L G+ PD YT L++AC G+G
Sbjct: 73 RSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMR 132
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G VHG IR GF+ ++ G++ LY G +D KVF+ +S+ D + R M+
Sbjct: 133 ETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTAC 192
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ GDV LF M E+ ++WN MIS + G EAL LFH M+ + +++ +++
Sbjct: 193 ARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMI 252
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+VL C +LGA+D G+W HSY E + + + V +G LVD Y KCG +D A VF +
Sbjct: 253 SVLSACTQLGALDQGRWAHSYIERNKI-KITVRLGTTLVDLYAKCGDMDKAMEVFWGMEE 311
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
KNV +W++ ++GLA NG GE ++L+ M GV+PN TFV VL C+ G V++ ++
Sbjct: 312 KNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKH 371
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SM I P L+HYGC+VD+ R+G + +A +I+ M ++ +AA+W SLL + R +
Sbjct: 372 FDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYK 431
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++EL A K+++ LE N G YVLLSNIYA+ WD+ +R M+ V+K PG S++
Sbjct: 432 NLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVM 491
Query: 477 E 477
E
Sbjct: 492 E 492
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 211/384 (54%), Gaps = 32/384 (8%)
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+G P+E TF ++ AC+ G+ G C+HG +++SG V+E
Sbjct: 631 VGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSG----------VLE---------- 670
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+V V N +++ + K GD+ LF ++ +++VSWN MI ++G
Sbjct: 671 -----------EVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLA 719
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
E L F+ R + D+AT +AVL +C +G V + Q IH G + + A
Sbjct: 720 EEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCG-FNANTCITTA 778
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y K G L+ + VF EI + ++W AM++ A +G G ++ +E M+ G+SP+
Sbjct: 779 LLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPD 838
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
TF +L C+H+GLVE+ R F +M+ + I P L+HY CMVD++GRSG +++AY LI
Sbjct: 839 HVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLI 898
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M + P++ +WG+LL +CR + +L A K L LEP + NY++LSNIY+ G W
Sbjct: 899 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWK 958
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
DA +R M++ + ++ G S IE
Sbjct: 959 DASRIRNLMKQKGLVRASGYSYIE 982
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 137/319 (42%), Gaps = 33/319 (10%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
+HG N + IH ++ + + ++ +++ G ++ + K+F + +++ +
Sbjct: 648 VHGGNKEEGVC-IHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSW 706
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+MI + NG +EE + F + + +G+ PD+ TF +L+ C +G +R+ Q +HG I+
Sbjct: 707 NTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMF 766
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
GF I +++LY G+++D VF E++ D +
Sbjct: 767 CGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSM--------------------- 805
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
+W M+++ G +A++ F M D T +L C+ G V
Sbjct: 806 ----------AWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLV 855
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS-WNAMIS 307
+ G++ + + +VD + G+L A + KE+P + W A++
Sbjct: 856 EEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLG 915
Query: 308 GLAFNGRGELGVELYEQMI 326
+LG + +++
Sbjct: 916 ACRVYKDTQLGTKAAKRLF 934
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 272/456 (59%), Gaps = 2/456 (0%)
Query: 23 AHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
A + H++ + ++I ++ + + G + A K+F++M ++ ++++I + N
Sbjct: 163 AKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 222
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
EE ++ F + +G+ DE L AC + + +G+ +H ++ G E + +++ +
Sbjct: 223 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 282
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ +Y+ CG + K+FDE D+I N MI G+ K VD +F M E+ VVSW+
Sbjct: 283 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 342
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
MIS ++ E L LF EM+ F+ DE T+V+V+ CARL A++ G+W+H+Y + +
Sbjct: 343 SMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN 402
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
GL V+ +G L+D Y KCG ++TA VF + K + +WNA+I GLA NG E +++
Sbjct: 403 GLTINVI-LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDM 461
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+ M V+PN+ TF+GVL C H GLV++ + F SM H I PN++HYGCMVD+LG
Sbjct: 462 FSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLG 521
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
R+G ++EA +L+ M + P+ A WG+LL +C+ HG E+ ++LI L+P + G +VL
Sbjct: 522 RAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 581
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LSNIYA G+WDD +R M ++ V K PG S+IE
Sbjct: 582 LSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 617
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 224/539 (41%), Gaps = 117/539 (21%)
Query: 25 FLRHKLHQSNLIL--AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
F+R S LI HF + I Y +IFN + N + ++N MI+AY
Sbjct: 6 FIRETYAASRLIKFSTHFPFI-----HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
L+ + + + D YT+ L++AC + VH +++ GF+ +R ++
Sbjct: 61 FAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLI 120
Query: 143 ELYTSCGQMDDGMKVFDE-------------------------------MSHRDVIVRNL 171
++ C M D +VF+E M R +I N
Sbjct: 121 NCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNS 180
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
MI F +G V + LF EM E+ +V+W+ +I+ ++ EA+R F M +D
Sbjct: 181 MIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVD 240
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG--------- 282
E V+ L CA L V++G+ IHS + G +++ NAL+ Y KCG
Sbjct: 241 EVVAVSALSACANLLVVNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLF 299
Query: 283 ----------------------ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
++D A+ +F +P K+VVSW++MISG A N + +
Sbjct: 300 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 359
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCA-----------HA---------------------- 347
L+++M G P++ T V V++ CA HA
Sbjct: 360 LFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYM 419
Query: 348 --GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNA 402
G VE A E+F M I + + ++ L +G V + D+ +M + PN
Sbjct: 420 KCGCVETALEVFYGM-----IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNE 474
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELIN---LEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+ +L +CR G V+ +H +I+ ++P N +Y + ++ G+ +AE L
Sbjct: 475 ITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP-NVKHYGCMVDLLGRAGKLQEAEEL 532
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 262/436 (60%), Gaps = 10/436 (2%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ Y+ +IF+++ N + ++N+M++AY + +E+ + L+ L+ + PD YT+ +++A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 110 CLGVGDLRVG-QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C V L G + +H +++ GF+ ++ ++ +Y CG M D K+FDE D +
Sbjct: 139 C-AVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197
Query: 169 RNLMIHGFCKKGD---VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
N ++ G+ KKGD V + LF EM E+ +VSW+ +IS ++G EAL +F EM
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV----DFYCKC 281
LDE VV+VL CA L V G+ IH G+ V++ NAL+ D Y KC
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGI-ESYVNLQNALIHMYSDMYMKC 316
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G ++ A VF + K V SWNA+I GLA NG E ++++ +M GV PN+ TF+GVL
Sbjct: 317 GCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVL 376
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C H GLV++ R FASM H I PN++HYGCMVD+LGR+G + EA LI SM + P+
Sbjct: 377 GACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPD 436
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A WG+LL +C+ HG E+ E ++LI L+P + G +VLLSNI+A G W+D +R
Sbjct: 437 VATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGM 496
Query: 462 MRENNVKKSPGQSLIE 477
M++ V K+PG SLIE
Sbjct: 497 MKQQGVVKTPGCSLIE 512
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N ILA +V G + ++ A K+FN+M ++ ++++I Y NG EE + +F +
Sbjct: 199 NSILAGYVKK-GDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS----CG 149
G+ DE +L AC + ++ G+ +HG +IR G E + +++ ++ +Y+ CG
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCG 317
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+++ ++VF+ M + V N +I G G V++ L +F EM+ V+
Sbjct: 318 CVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP---------- 367
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW-IHSYAESSGLYRKVV 268
+E T + VL C +G VD G+ S E G+ V
Sbjct: 368 ---------------------NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVK 406
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
G +VD + G+L+ A + + +P +V +W A++ +G E+G + ++I
Sbjct: 407 HYG-CMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI 464
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/477 (37%), Positives = 266/477 (55%), Gaps = 12/477 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + HL QIHA LR LH ++ +L + ++ +F++ NP+V L
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFL 88
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+ +I A++ + ++ + I P+ +T + LLKAC L + VH I
Sbjct: 89 WTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAI 144
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ G + G+V+ Y G + K+FD M R ++ M+ + K G + +
Sbjct: 145 KFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARV 204
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-------DEATVVAVLP 240
LF M + VV WN+MI + G +EAL F +M +E TVVAVL
Sbjct: 205 LFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLS 264
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C ++GA++ G+W+HSY E++G+ + V VG ALVD YCKCG L+ AR VF + K+VV
Sbjct: 265 SCGQVGALECGKWVHSYVENNGI-KVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVV 323
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+WN+MI G +G + ++L+ +M GV P+ TFV VLT CAHAGLV K E+F SM
Sbjct: 324 AWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSM 383
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ + P +EHYGCMV++LGR+G ++EAYDL+RSM + P+ +WG+LL +CR H +V L
Sbjct: 384 KDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSL 443
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E + L++ +SG YVLLSN+YA W +R M+ + V+K PG S IE
Sbjct: 444 GEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIE 500
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/429 (39%), Positives = 259/429 (60%), Gaps = 5/429 (1%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ YA +FNQ+ NP+ NS+I+ Y+ + + + L+ G+ PD +TF L K+
Sbjct: 28 LPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS 87
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G L G+ +H + GF I+ ++ +Y++CG + KVFD+M ++ V+
Sbjct: 88 C---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSW 144
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERS-VVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
MI + + + + LFR M S + WN+MI+ + EAL LF+EM+
Sbjct: 145 ATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 204
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D+ T+ ++L C LGA+++G+W+H Y E + V ++G ALVD Y KCG +++A
Sbjct: 205 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDV-ALGTALVDMYAKCGSIESAM 263
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF+E+P K+V++W A+I GLA G+G +EL+ +M V P+ TFVGVL C+HAG
Sbjct: 264 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 323
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV + F SM + I P++EHYGCMVD+LGR+G + EA DLI++M + P+ + L
Sbjct: 324 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 383
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+CR HG++ +AE A ++LI L+P N G YVLLSNIY+ W+ A+ +R M E N+K
Sbjct: 384 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 443
Query: 469 KSPGQSLIE 477
K PG S IE
Sbjct: 444 KPPGCSAIE 452
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 272/456 (59%), Gaps = 2/456 (0%)
Query: 23 AHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
A + H++ + ++I ++ + + G + A K+F++M ++ ++++I + N
Sbjct: 298 AKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 357
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
EE ++ F + +G+ DE L AC + + +G+ +H ++ G E + +++ +
Sbjct: 358 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 417
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ +Y+ CG + K+FDE D+I N MI G+ K VD +F M E+ VVSW+
Sbjct: 418 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 477
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
MIS ++ E L LF EM+ F+ DE T+V+V+ CARL A++ G+W+H+Y + +
Sbjct: 478 SMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN 537
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
GL V+ +G L+D Y KCG ++TA VF + K + +WNA+I GLA NG E +++
Sbjct: 538 GLTINVI-LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDM 596
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+ M V+PN+ TF+GVL C H GLV++ + F SM H I PN++HYGCMVD+LG
Sbjct: 597 FSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLG 656
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
R+G ++EA +L+ M + P+ A WG+LL +C+ HG E+ ++LI L+P + G +VL
Sbjct: 657 RAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVL 716
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LSNIYA G+WDD +R M ++ V K PG S+IE
Sbjct: 717 LSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 752
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 197/472 (41%), Gaps = 112/472 (23%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D YT+ L++AC + VH +++ GF+ +R ++ ++ C M D +VF
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271
Query: 159 DE-------------------------------MSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+E M R +I N MI F +G V +
Sbjct: 272 NESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACK 331
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF EM E+ +V+W+ +I+ ++ EA+R F M +DE V+ L CA L
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 391
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG------------------------- 282
V++G+ IHS + G +++ NAL+ Y KCG
Sbjct: 392 VNMGKLIHSLSLKIGT-ESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 283 ------ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
++D A+ +F +P K+VVSW++MISG A N + + L+++M G P++ T
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 337 FVGVLTCCA-----------HA------------------------GLVEKARELFASMT 361
V V++ CA HA G VE A E+F M
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM- 569
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHV 418
I + + ++ L +G V + D+ +M + PN + +L +CR G V
Sbjct: 570 ----IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 625
Query: 419 ELAEHAVKELIN---LEPWNSGNYVLLSNIYAEGGRWDDAETL--RMWMREN 465
+ +H +I+ ++P N +Y + ++ G+ +AE L RM M +
Sbjct: 626 DEGQHHFYSMIHDHKIQP-NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPD 676
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/547 (33%), Positives = 288/547 (52%), Gaps = 78/547 (14%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
K+L LL + L QIH + + +H+ N +L F+ L + A+ +F+Q+ P
Sbjct: 33 KLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFID----LKDFNNASLLFSQIPYP 88
Query: 64 SVLLFNSMIKAYSLNGPS-EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
+ FN MI+ + ++ + +K+ GI P+ +T+ + AC + L GQC
Sbjct: 89 NEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCA 148
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H +++SG G +R ++ +Y+ CG++ +VFDE+S +D++ N MI G+ + G
Sbjct: 149 HSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYA 208
Query: 183 DKGLYLFREMR-------ERSVV---------------SW-----------------NLM 203
+ LF EMR E ++V SW + +
Sbjct: 209 GDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSAL 268
Query: 204 ISSLGKSGRDSEALRLFHE-------------------------------MRDQAFELDE 232
I GK G S A R+F MR+ D+
Sbjct: 269 IGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDK 328
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V VL CA +GA+D G+W+ +YA GL + V AL+D Y KCG LD A VF+
Sbjct: 329 ITLVGVLSACASIGALDFGKWLDTYASERGLQNDIY-VSTALIDMYAKCGSLDDALRVFE 387
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG--VSPNKATFVGVLTCCAHAGLV 350
++P+KN VSWNAMIS LAF+GR + + L+++M +G V PN +F+GVL+ C HAGLV
Sbjct: 388 DMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLV 447
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
++ R+LF M+ +VP +EH+ CMVD+L R+G V EA+D I M +P+ + G+LL
Sbjct: 448 DEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLG 507
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+C+ +V+++E + L+ +EP NSGNY++ S I+A RWDD+ +R+ MR+ V K+
Sbjct: 508 ACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKT 567
Query: 471 PGQSLIE 477
PG S IE
Sbjct: 568 PGCSWIE 574
>gi|125596785|gb|EAZ36565.1| hypothetical protein OsJ_20903 [Oryza sativa Japonica Group]
Length = 334
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/325 (49%), Positives = 214/325 (65%), Gaps = 8/325 (2%)
Query: 161 MSHRD--VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS-----WNLMISSLGKSGRD 213
M+ R+ + N +I + D+ +LF EM+ WN+MI+ +D
Sbjct: 1 MTQRNKCTVAYNTLITACFRADDLGAARHLFDEMQRYRRSRRSVVSWNVMIAGCAWCKKD 60
Query: 214 SEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
A+ F M R+ D+ T+ AVLP+C RLG V +G+W H +A SGL + V V N
Sbjct: 61 DIAVLCFERMVREGEVAPDDGTLAAVLPVCGRLGNVGVGRWAHEHARKSGLLDRKVHVAN 120
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
A++D YCKCG + +AR VFK + +++VVSWN MISG + NG G G+ELY +M G P
Sbjct: 121 AVMDMYCKCGDVHSAREVFKGMRQRSVVSWNTMISGFSLNGHGIEGIELYREMRTHGEMP 180
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ TF+GVL CCAHAG V+ R++F SM H I P +EHYGCMVD+ GRSG + EAY L
Sbjct: 181 NEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYGCMVDLFGRSGLLEEAYAL 240
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
I+ M +RPNAAIWG+LLS+C H + +AE A+KELINLEPWNSGNYVLL+N+YAE GRW
Sbjct: 241 IQGMPMRPNAAIWGALLSACHAHSGISIAEVALKELINLEPWNSGNYVLLANLYAETGRW 300
Query: 453 DDAETLRMWMRENNVKKSPGQSLIE 477
++A R MR +V+K+PGQSLIE
Sbjct: 301 EEAGDARRLMRRMSVQKAPGQSLIE 325
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 39/276 (14%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLL-----FNSMIKAYSLNGPSEEPVKLFALLKNL 94
++ C +++ A +F++M+ +N MI + + V F +
Sbjct: 14 LITACFRADDLGAARHLFDEMQRYRRSRRSVVSWNVMIAGCAWCKKDDIAVLCFERMVRE 73
Query: 95 G-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGSIRIGVVELYTSCGQMD 152
G + PD+ T A +L C +G++ VG+ H +SG +R + V+++Y CG +
Sbjct: 74 GEVAPDDGTLAAVLPVCGRLGNVGVGRWAHEHARKSGLLDRKVHVANAVMDMYCKCGDVH 133
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
+VF M R V+ N MI GF G +G+ L+REMR +
Sbjct: 134 SAREVFKGMRQRSVVSWNTMISGFSLNGHGIEGIELYREMRTHGEMP------------- 180
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
+E T + VL CA GAVD+G+ I + V+
Sbjct: 181 ------------------NEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHGIEPVIEHYG 222
Query: 273 ALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMIS 307
+VD + + G+L+ A + + +P R N W A++S
Sbjct: 223 CMVDLFGRSGLLEEAYALIQGMPMRPNAAIWGALLS 258
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
L K+H +N ++ + CG ++ A ++F MR SV+ +N+MI +SLNG E
Sbjct: 111 LLDRKVHVANAVMDMYCK-CG---DVHSAREVFKGMRQRSVVSWNTMISGFSLNGHGIEG 166
Query: 85 VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-------QCVHGEIIRSGFERFGSI 137
++L+ ++ G P+E TF +L C G + VG Q HG I E +G +
Sbjct: 167 IELYREMRTHGEMPNEVTFLGVLGCCAHAGAVDVGRDIFQSMQLEHG--IEPVIEHYGCM 224
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHR 164
V+L+ G +++ + M R
Sbjct: 225 ----VDLFGRSGLLEEAYALIQGMPMR 247
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 273/487 (56%), Gaps = 20/487 (4%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQMRNP 63
+ +L N L Q+ +H Q++ + C L+ + YA +IFN + +P
Sbjct: 9 VTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHIHSP 68
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++ LF ++I A+S KLF + N I P+ + + +LK+ V + + VH
Sbjct: 69 NIYLFTAIITAFS--SQQHTTFKLFKTMLNSNIRPNNFIYPHVLKS---VKERFLVDLVH 123
Query: 124 GEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
+I++ GF + + +V+ Y+ G + D KVFDEMS R+++V +++ G+ + GDV
Sbjct: 124 AQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDV 183
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA----------FELDE 232
+KGL +F EM +R V +WN +IS ++G SE +RLF EM A + ++
Sbjct: 184 EKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQ 243
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
TVV VL C G + +G+WIH Y G V NALVD Y KCG L+ AR VF+
Sbjct: 244 VTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSF-VSNALVDMYGKCGSLELARKVFE 302
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI--AKGVSPNKATFVGVLTCCAHAGLV 350
RK + SWN+MI+ A +G+ E + +E+M+ GV P++ TF+G+L C H GLV
Sbjct: 303 MDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLV 362
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
E+ F M + I P + HYGC++D+LGR+G EA D+++ MS+ P+ +WGSLL+
Sbjct: 363 EQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLN 422
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
C+ HG +LAE A K+L+ ++P N G +L+NIY + G+WD+ + +++ K
Sbjct: 423 GCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKI 482
Query: 471 PGQSLIE 477
PG S IE
Sbjct: 483 PGCSWIE 489
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 272/484 (56%), Gaps = 12/484 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQ 59
+ +L L N HL Q+ A+ ++ + C TL+ + YA IF+
Sbjct: 5 LNEHVLDTLSKSNHLNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDH 64
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEP--VKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDL 116
+ + + LF +MI AY+ + P+ P + LF +L++ P+ + F LK C +
Sbjct: 65 IPSLNTHLFTAMITAYAAH-PATHPSALSLFRHMLRSQPPRPNHFIFPHALKTC---PES 120
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+ +H +I++SGF + ++ +V+ Y+ G + + KVFDEMS R V+ M+ G
Sbjct: 121 CAAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVSG 180
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
F + GDV+ + +F EM +R V SWN +I+ ++G ++ + LF M + + TV
Sbjct: 181 FARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTV 240
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V L C +G + +G+WIH Y +GL V NALVD Y KCG L AR VF+ P
Sbjct: 241 VCALSACGHMGMLQLGRWIHGYVYKNGLAFDSF-VLNALVDMYGKCGSLGKARKVFEMNP 299
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMI--AKGVSPNKATFVGVLTCCAHAGLVEKA 353
K + SWN+MI+ A +G+ + + ++EQM+ GV P++ TFVG+L C H GLVEK
Sbjct: 300 EKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKG 359
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F M + I P +EHYGC++D+LGR+G EA D+++ MS+ P+ +WGSLL+ C+
Sbjct: 360 YWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCK 419
Query: 414 THGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
HG +LAE A K+LI ++P N G ++L+N+Y E G+WD+ + +++ K PG
Sbjct: 420 VHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGC 479
Query: 474 SLIE 477
S IE
Sbjct: 480 SWIE 483
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 285/506 (56%), Gaps = 45/506 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQS-----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
+N RT L QIHA + + L + LI + +SV G L KYA K+F ++ P V
Sbjct: 23 KNFRT-LMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGAL---KYAHKLFEEIPKPDVS 78
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ N +++ + + E+ V L+ ++ G+ PD YTF +LKAC + G +HG++
Sbjct: 79 ICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKV 138
Query: 127 IRSGFERFGSIRIGVVELYTSC-------------------------------GQMDDGM 155
+R GF ++ ++ + +C G++D+ M
Sbjct: 139 VRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FDEM +D + N+MI G K ++D LF E+ VV+WN MIS G E
Sbjct: 199 RLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG---- 271
AL +F EMRD D T++++L CA LG ++ G+ +H Y + + VG
Sbjct: 259 ALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+D Y KCG +D A VF+ + +++ +WN +I GLA + E VE++E+M V
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEMFEEMQRLKVW 377
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN+ TF+GV+ C+H+G V++ R+ F+ M +++I PN++HYGCMVD+LGR+G + EA+
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFM 437
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+ SM I PNA +W +LL +C+ +G+VEL ++A ++L+++ SG+YVLLSNIYA G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WD + +R + VKK G SLIE
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGISLIE 523
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 261/442 (59%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H CG L+ A K+F ++ V+ +NSMI + G ++ ++LF +++ +
Sbjct: 174 LIHCYFSCGDLDS---ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 230
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
T +L AC + DL G+ V I + ++ ++++YT CG ++D +
Sbjct: 231 KASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 290
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD M +D + M+ G+ D + + M ++ +V+WN +IS+ ++G+ +EA
Sbjct: 291 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEA 350
Query: 217 LRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L +FHE++ Q +L++ T+V+ L CA++GA+++G+WIHSY + +G+ + V +AL+
Sbjct: 351 LLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI-KMNFYVTSALI 409
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y KCG L+ AR VF + +++V W+AMI GLA +G G V+++ +M V PN
Sbjct: 410 HMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGV 469
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF V C+H GLV++A LF M + IVP +HY C+VDVLGRSG + +A I +
Sbjct: 470 TFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEA 529
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I P+ ++WG+LL +C+ H ++ LAE A L+ LEP N G +VLLSNIYA+ G+WD+
Sbjct: 530 MPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNV 589
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR MR +KK PG S IE
Sbjct: 590 SELRKHMRVTGLKKEPGCSSIE 611
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 218/497 (43%), Gaps = 117/497 (23%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQM 60
R + L+ ++ L Q HAH +R + + ++ + ++YA K+F+++
Sbjct: 32 RHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPV-KLFALLKNLG----IWPDEYTFAPLLKACLGVGD 115
P+ +N++I+AY+ +GP +PV ++A L + +P++YTF L+KA V
Sbjct: 92 PQPNSFTWNTLIRAYA-SGP--DPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSS 148
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
L +GQ +HG I+S + ++ Y SCG +D KVF + +DV+ N MI+G
Sbjct: 149 LSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 208
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
F +KG DK L LF++M +SE ++ H T+
Sbjct: 209 FVQKGSPDKALELFKKM--------------------ESEDVKASH-----------VTM 237
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL----------- 284
V VL CA++ ++ G+ + SY E + + +++ NA++D Y KCG +
Sbjct: 238 VGVLSACAKIRDLEFGRRVCSYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAME 296
Query: 285 --------------------DTARNVFKEIPRKNVVSWNAMISGLAFNGR-GELGVELYE 323
+ AR V +P+K++V+WNA+IS NG+ E + +E
Sbjct: 297 EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHE 356
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGL---------------------------------- 349
+ K + N+ T V L+ CA G
Sbjct: 357 LQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCG 416
Query: 350 -VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIW 405
+EKARE+F S+ V + M+ L GC EA D+ M +++PN +
Sbjct: 417 DLEKAREVFNSVEKRDVFV-----WSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTF 471
Query: 406 GSLLSSCRTHGHVELAE 422
++ +C G V+ AE
Sbjct: 472 TNVFCACSHTGLVDEAE 488
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 259/441 (58%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
+ H + CG E+ A K+F++ ++ +NS+I Y G ++E L+ + L +
Sbjct: 196 IIHVLVSCG---ELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNV 252
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE T ++ A + +L +G+ +H I G + ++++Y C ++
Sbjct: 253 MPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKI 312
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F+ M+ + V+ M+ G+ K G ++ + LF EM E+ VV WN +I ++ R EA
Sbjct: 313 LFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEA 372
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LFHEM+ + D+ TVV L C++LGA+D+G W+H Y + L V ++G ALVD
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNV-ALGTALVD 431
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + A VF+E+P +N ++W A+I GLA +G+ + + +MI+ G+ P++ T
Sbjct: 432 MYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEIT 491
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL+ C H GLV++ R+ F MT + I P L+HY C+VD+LGR+G + EA +LIRSM
Sbjct: 492 FIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSM 551
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
P+A +WG+L R HG+V + E A +L+ L+P + G YVLL+N+Y + W+ A
Sbjct: 552 PFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQAR 611
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M E V+K+PG S IE
Sbjct: 612 KVRKMMEERGVEKTPGCSSIE 632
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 196/464 (42%), Gaps = 74/464 (15%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRN 62
+L LL + + +IHA + L L+ V+ C + Y KI N N
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRV 118
+ +N I+ Y SE P+ L +N+ PD YT+ L K C G
Sbjct: 117 LNXFSWNMAIRGYV---ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWT 173
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ G +I+ GF+ + ++ + SCG++ K+FDE RD++ N +I+G+ +
Sbjct: 174 ANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVR 233
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G D+ L+ +M E +V+ DE T++ V
Sbjct: 234 CGLADEAFDLYYKMGELNVMP-------------------------------DEVTMIGV 262
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC----------------- 281
+ A+L + +G+ +H E GL V + NAL+D Y KC
Sbjct: 263 VSASAQLENLALGRKLHQSIEEMGL-NLTVPLANALMDMYIKCKNIEAAKILFENMTKKT 321
Query: 282 --------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G+L++A +F E+P K+VV WNA+I G R + + L+ +M A
Sbjct: 322 VVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQA 381
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
V+P+K T V L+ C+ G ++ + + H++ N+ +VD+ + G ++
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIK 440
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+A + M R N+ W +++ HG A E+I++
Sbjct: 441 KAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + +H L + + V + IK A ++F +M + L + ++I +L+G
Sbjct: 410 MHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ 469
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ F+ + ++G+ PDE TF +L A C HG ++ G + F
Sbjct: 470 PHAAISYFSEMISIGLVPDEITFIGVLSA-----------CCHGGLVDQGRDYF 512
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 259/441 (58%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
+ H + CG E+ A K+F++ ++ +NS+I Y G ++E L+ + L +
Sbjct: 196 IIHVLVSCG---ELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNV 252
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE T ++ A + +L +G+ +H I G + ++++Y C ++
Sbjct: 253 MPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKI 312
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F+ M+ + V+ M+ G+ K G ++ + LF EM E+ VV WN +I ++ R EA
Sbjct: 313 LFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEA 372
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LFHEM+ + D+ TVV L C++LGA+D+G W+H Y + L V ++G ALVD
Sbjct: 373 LALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNV-ALGTALVD 431
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + A VF+E+P +N ++W A+I GLA +G+ + + +MI+ G+ P++ T
Sbjct: 432 MYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEIT 491
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL+ C H GLV++ R+ F MT + I P L+HY C+VD+LGR+G + EA +LIRSM
Sbjct: 492 FIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSM 551
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
P+A +WG+L R HG+V + E A +L+ L+P + G YVLL+N+Y + W+ A
Sbjct: 552 PFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQAR 611
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M E V+K+PG S IE
Sbjct: 612 KVRKMMEERGVEKTPGCSSIE 632
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 197/464 (42%), Gaps = 74/464 (15%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRN 62
+L LL + + +IHA + L L+ V+ C + Y KI N N
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRV 118
+V +N I+ Y SE P+ L +N+ PD YT+ L K C G
Sbjct: 117 LNVFSWNMAIRGYV---ESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWT 173
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ G +I+ GF+ + ++ + SCG++ K+FDE RD++ N +I+G+ +
Sbjct: 174 ANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVR 233
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G D+ L+ +M E +V+ DE T++ V
Sbjct: 234 CGLADEAFDLYYKMGELNVMP-------------------------------DEVTMIGV 262
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC----------------- 281
+ A+L + +G+ +H E GL V + NAL+D Y KC
Sbjct: 263 VSASAQLENLALGRKLHQSIEEMGL-NLTVPLANALMDMYIKCKNIEAAKILFENMTKKT 321
Query: 282 --------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G+L++A +F E+P K+VV WNA+I G R + + L+ +M A
Sbjct: 322 VVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQA 381
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
V+P+K T V L+ C+ G ++ + + H++ N+ +VD+ + G ++
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK-HNLTMNVALGTALVDMYAKCGNIK 440
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+A + M R N+ W +++ HG A E+I++
Sbjct: 441 KAIQVFEEMPGR-NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + +H L + + V + IK A ++F +M + L + ++I +L+G
Sbjct: 410 MHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQ 469
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ F+ + ++G+ PDE TF +L A C HG ++ G + F
Sbjct: 470 PHAAISYFSEMISIGLVPDEITFIGVLSA-----------CCHGGLVDQGRDYF 512
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/471 (37%), Positives = 279/471 (59%), Gaps = 11/471 (2%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIF--NQMRNPSVLLFNS 70
T THL Q H L+H L Q+++ L+ F+ +LN Y+ IF N R + ++N+
Sbjct: 24 TTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFPIFVYNN 83
Query: 71 MIKA-YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+I A YS N ++ V +F ++ LG+ D Y+ +LK+ + + D +G+ +H + +
Sbjct: 84 IIYALYSSN--AKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVT 141
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G ++ S+ ++++Y SC + K+FDE ++ N MI + K GDV LF
Sbjct: 142 GLDKNVSVCSSLIQMY-SCYDVCSARKLFDEFGGNGCVL-NAMIVAYVKVGDVSNARKLF 199
Query: 190 REM--RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
M R++ V SW MIS ++ +EA++LF M+ + + DE ++AVL CA LGA
Sbjct: 200 DSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGA 259
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+WIH+Y E L K+V + N+L+D Y K G + A +F+ + K +++W MI+
Sbjct: 260 LHLGEWIHNYIEKHKL-SKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIA 318
Query: 308 GLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
GLA +G G+ + ++ M + V PN+ TF+ +L+ C+H GLVE R+ F SM + I
Sbjct: 319 GLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGI 378
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P +EHYGCM+D+LGR+G ++EA +++ M NAAIWGSLL++ G ELAE A++
Sbjct: 379 EPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALR 438
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L LEP + GNY LLSN YA GRW+++ +R M++ V+K PG S IE
Sbjct: 439 HLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIE 489
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 276/512 (53%), Gaps = 37/512 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E + L+HG T L QIHA + H L S+LI +S I ++ +FN +
Sbjct: 81 EAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHK 140
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
++ FN++I+ + N + F L+ GI PD T+ +LK+ G+ +G
Sbjct: 141 PKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMA 200
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR----------DVIVR-- 169
+H I+R G E +R+ +V++Y ++ KVFDE R +V+++
Sbjct: 201 IHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGC 260
Query: 170 ------------------------NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
+ +I GF K GD+D+ + LF +M E++VVSW M+
Sbjct: 261 CKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVD 320
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++G +AL +F +M ++ + T+V+ L CA++G ++ G IH Y + +GL+
Sbjct: 321 GFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHL 380
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
++G ALVD Y KCG +++A VF E +K++ +W MI G A +G E + ++QM
Sbjct: 381 -TEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQM 439
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+ G+ P++ F+ +LT C H+G V+ F SM + I P+++HY +VD+LGRSG
Sbjct: 440 MFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQ 499
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
++EA I M + P+ IWG+L +CR H ++A+ A+ +L+ LEP ++GNY+ LSN
Sbjct: 500 LKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNA 559
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA G+W+DAE +R+ M+ V K+ G S IE
Sbjct: 560 YAALGQWEDAERVRVLMQNRGVHKNSGWSCIE 591
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 269/466 (57%), Gaps = 14/466 (3%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV--CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
++HAH + LHQ L +++ + + + +A +F+ + +PS L+N+M + Y+
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMFRVYAA 65
Query: 78 NGPSEEPVKLFALLKNL-----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ P L ALL + G PD YTF LLKAC + L GQ +H + ++ G
Sbjct: 66 S-----PTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFGLG 120
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ LY S MD +VFD M +RD+ ++ + V +F EM
Sbjct: 121 GHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFDEM 180
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
ERSV+S++ MI++ + R EAL LF E+ E ++ V++VL CA LGA+D+G+
Sbjct: 181 PERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDVGR 240
Query: 253 WIHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
W++SY +S G Y + AL+D + KCG ++ A VF+ K+V W AM+SGLA
Sbjct: 241 WVYSYVCQSKGDYVDS-RIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 299
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G GE +E +E+M+ GV PN TFV +L+ C+H+GLV + F M + P +E
Sbjct: 300 HGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVE 359
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
H+GC+VD+LGR+G + +A LI M PNAAIWGSLL++CR + +VE+ E A + LI
Sbjct: 360 HFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIKD 419
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EPWN Y+ L ++Y E GRWD+ E +++ M+E +K PG SLIE
Sbjct: 420 EPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIE 465
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 142/381 (37%), Gaps = 38/381 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-- 62
+ R+ T H +H H LRH + C L + ++ Q
Sbjct: 59 MFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQELHCQALKFG 118
Query: 63 --PSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDE---YTFAPLLKACLGVGD 115
V + NS+I Y N + ++F + +++ W Y + +KA V D
Sbjct: 119 LGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCSVKAARKVFD 178
Query: 116 -----------LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC-----------GQMDD 153
+ V G R + F + +E SC G +D
Sbjct: 179 EMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDV 238
Query: 154 GMKVFDEM-----SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G V+ + + D + +I F K G ++ L +F +E+ V W M+S L
Sbjct: 239 GRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLA 298
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
G + + F +M D + + T VA+L C+ G V+ G + ES V
Sbjct: 299 MHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTV 358
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
+VD + G++D A + E+P N W ++++ E+G EL Q +
Sbjct: 359 EHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIG-ELAAQWLI 417
Query: 328 KGVSPNKATFVGVLTCCAHAG 348
K N A ++ +L+ AG
Sbjct: 418 KDEPWNGALYMTLLSLYREAG 438
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 274/479 (57%), Gaps = 10/479 (2%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKL--HQSNLIL-AHFVSVCGTLNEIKYATKIFNQM 60
K+ L+ + + QIHA LRH L H +L + +I+++ +F+Q
Sbjct: 31 KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQT 90
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P + LF + I S+NG ++ L+ L + I P+E+TF+ LLK+C + G+
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGK 146
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H +++ G + G+V++Y G + KVFD M R ++ MI + K+G
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAVL 239
+V+ LF M ER +VSWN+MI + G ++AL LF ++ + + DE TVVA L
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C+++GA++ G+WIH + +SS + R V V L+D Y KCG L+ A VF + PRK++
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRI-RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V+WNAMI+G A +G + + L+ +M G+ P TF+G L CAHAGLV + +F
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + I P +EHYGC+V +LGR+G ++ AY+ I++M++ ++ +W S+L SC+ HG
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L + + LI L NSG YVLLSNIYA G ++ +R M+E + K PG S IE
Sbjct: 446 VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIE 504
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 272/473 (57%), Gaps = 12/473 (2%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMRNPSVLLFN 69
+ + L Q H+ +R L N ++ ++ C T + + YA K+F+ + P L+N
Sbjct: 33 QSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYN 92
Query: 70 SMIKAY--SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
++IK + S P+ + L++ + + P+ +TF LL AC + + G +H +
Sbjct: 93 TIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---QHGMQIHAHLF 149
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ GF ++ +Y + +++ +VF + H D + +I G+ K G +D+
Sbjct: 150 KFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAFT 209
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE-LDEATVVAVLPICARLG 246
+F+ M +++ SWN M+++ ++ R EA LF M+ + LD+ +L C LG
Sbjct: 210 IFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLG 269
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNA 304
A+D G+WIH Y + +G+ + A+VD YCKCG L+ A VF +P + + SWN
Sbjct: 270 ALDQGKWIHEYIKRNGIELDS-KLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNC 328
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA +G GE ++L+++M + V+P+ TF+ +LT CAH+GLVE+ R F+ M ++
Sbjct: 329 MIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVY 388
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +EH+GCMVD+LGR+G V EA LI M + P+ + G+LL +C+ H ++EL E
Sbjct: 389 GIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEI 448
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ +I LEP NSG YVLL+N+YA G+W+DA +R M + VKK+PG S+IE
Sbjct: 449 GRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIE 501
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 281/535 (52%), Gaps = 63/535 (11%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL-NEIKYATKIFNQMRNP 63
I LL R HL Q+HA + L Q + ++ F+S TL + + YA+ +F+++ P
Sbjct: 32 ITTLLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASSVFHRVLAP 91
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
S +L+N++IK++ + FA +K G PD +T+ ++KAC G R G+ +H
Sbjct: 92 STVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSLH 151
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD------------------------ 159
G R G ++ + ++++Y CG++ D KVFD
Sbjct: 152 GSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVV 211
Query: 160 -------EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS------------- 199
EM HR+V N M+ GF K GD+ +F M E++VVS
Sbjct: 212 EARKLFDEMPHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGD 271
Query: 200 ------------------WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
W+ +IS ++G ++ALR+F EM + DE +V+++
Sbjct: 272 MAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMSA 331
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
A+LG +++ QW+ SY + + V AL+D KCG ++ A +F E PR++VV
Sbjct: 332 SAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCGNMERALKLFDEKPRRDVVL 391
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
+ +MI GL+ +GRGE V L+ +M+ +G++P++ F +LT C+ AGLV++ R F SM
Sbjct: 392 YCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMK 451
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I P +HY CMVD+L RSG +R+AY+LI+ + P+A WG+LL +C+ +G EL
Sbjct: 452 QKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAWGALLGACKLYGDSELG 511
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E L LEP N+ NYVLLS+IYA RW D +R MRE V+K PG S I
Sbjct: 512 EIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 289/547 (52%), Gaps = 74/547 (13%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIFNQM 60
R LL+ ++ L++IHA + + Q NL+L+ ++ C + YA K+F+QM
Sbjct: 30 RSFNYLLNCCSSLPDLSRIHALVVTNGCGQ-NLLLSTKLIITACCLAPTMDYARKMFDQM 88
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
V L+N++I+ Y+ GP EE + L++ + G++PD YTF ++++C + LR G+
Sbjct: 89 PKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGK 148
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH I++ GF+ ++ +V +Y+ G+ VF EM R+++ +I G+ +
Sbjct: 149 EVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNR 208
Query: 181 DVDKGLYLFREM---------------------------------------RERSVVSWN 201
+GL +FREM + V N
Sbjct: 209 YFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTN 268
Query: 202 LMISSLGKSGRDSEALRLFHEM-----------------------------RDQA--FEL 230
+I+ GK G A LF M R QA +
Sbjct: 269 ALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDF 328
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D T+V+V+ CA LGA++ G+W+H + GL VS+ NAL+D Y KCG +D AR V
Sbjct: 329 DYITMVSVISACASLGALNTGRWMHELVKRKGLEIN-VSITNALIDMYAKCGNIDLAREV 387
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F+ +P ++VVSW +MI A +G GE ++L+ +M +GV PN TF V T C H+GLV
Sbjct: 388 FERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLV 447
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
E+ R+ F SM +SI+P +EH CMVD+LGR+G + EAY+ I M + P+ ++WG+LL
Sbjct: 448 EEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLG 507
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
SCR H ++ELAE ++L L+P YVL+SNIYAE GRW+DA LR M E +KK
Sbjct: 508 SCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKI 567
Query: 471 PGQSLIE 477
PG SL+E
Sbjct: 568 PGHSLVE 574
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/537 (33%), Positives = 277/537 (51%), Gaps = 71/537 (13%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
LH + QIHA L+ LHQ + ++ + A +FN + +P+V L+
Sbjct: 28 LHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLY 87
Query: 69 NSMIKAYSLNGPSEE-PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
NS+I+A++ N P F ++ G++PD +T+ LLKAC G L + + +H +
Sbjct: 88 NSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVE 147
Query: 128 RSGFERFGSIRI-----------------GVVELYTS------------------CGQMD 152
+ GF +G I + G + L+ + CG++
Sbjct: 148 KIGF--YGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQ 205
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
K+FDEM RD++ N M+ G+ K G++D LF M R++VSW+ M+ K G
Sbjct: 206 GACKLFDEMPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGD 265
Query: 213 -------------------------------DSEALRLFHEMRDQAFELDEATVVAVLPI 241
EA L+ +M + D+ ++++L
Sbjct: 266 MDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAA 325
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVV 300
CA G + +G+ IH+ + +R V NA +D Y KCG LD A +VF + +K+VV
Sbjct: 326 CAESGMLGLGKRIHA-SMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVV 384
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+MI G A +G GE +EL+ M+ +G P+ TFVG+L C HAGLV + R+ F SM
Sbjct: 385 SWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSM 444
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++ IVP +EHYGCM+D+LGR G ++EA+ L+RSM + PNA I G+LL++CR H V+L
Sbjct: 445 EKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDL 504
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++L LEP + GNY LLSNIYA+ G W + +R+ M+ +K G S IE
Sbjct: 505 ARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIE 561
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 270/444 (60%), Gaps = 3/444 (0%)
Query: 36 ILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
I H S+ L+ E+ A +FN+ R ++ +NSMI G + E +K++ ++
Sbjct: 193 IFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEA 252
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ P+E T ++ +C V DL +G+ H I G E + ++++Y CG++
Sbjct: 253 EKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLT 312
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+FD M+ + ++ M+ G+ + G +D + ++ E+SVV WN +IS ++ +
Sbjct: 313 ARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQG 372
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LFHEM+ + E D+ T+V L C++LGA+D+G WIH Y E L V ++G A
Sbjct: 373 KEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV-ALGTA 431
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
LVD Y KCG + A VF+EIP++N ++W A+I GLA +G + + + +MI G+ P+
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TF+GVL+ C H GLVE+ R+ F+ M+ ++ P L+HY CMVD+LGR+G + EA +L+
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
++M + +AA+ G+L +CR +G+V++ E +L+ ++P +SGNYVLL+++Y+E W
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+A + R M + V+K+PG SL+E
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVE 635
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 202/464 (43%), Gaps = 68/464 (14%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ 59
E +L +L + L QI A + L ++ + V+ C E+ Y T+I +
Sbjct: 57 ENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYR 116
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
++ +V +N+ I+ Y +G E L+ +L + PD +T+ LLK C G +
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G V G +++ GFE + + + SCG++ VF++ RD++ N MI G K
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK 236
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+G L I EA++++ EM + +E T++ +
Sbjct: 237 RG---------------------LAI----------EAIKIYKEMEAEKVRPNEITMIGM 265
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC----------------- 281
+ C+++ +++G+ H Y + GL + + NAL+D Y KC
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKEHGL-EFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 282 --------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G LD AR + +IP K+VV WNA+ISG +G+ + L+ +M
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQI 384
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ + P+K T V L+ C+ G ++ + + H + ++ +VD+ + G +
Sbjct: 385 RTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIA 443
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
A + + R N W +++ HG+ + A ++I++
Sbjct: 444 RALQVFEEIPQR-NCLTWTAVICGLALHGNAQDALSYFSKMIHI 486
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 64/232 (27%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + RHKL + V + I A ++F ++ + L + ++I +L+G
Sbjct: 413 IHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGN 472
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+++ + F+ + ++GI PDE TF +L A C HG
Sbjct: 473 AQDALSYFSKMIHIGIVPDEITFLGVLSA-----------CCHG---------------- 505
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
G +++G K F EMS + + L +
Sbjct: 506 --------GLVEEGRKYFSEMSSKFNVSPKLK--------------------------HY 531
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ M+ LG++G EA L M A D A + A+ C G V IG+
Sbjct: 532 SCMVDLLGRAGHLEEAEELVKNMPMAA---DAAVLGALFFACRVYGNVQIGE 580
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/464 (35%), Positives = 270/464 (58%), Gaps = 9/464 (1%)
Query: 18 LTQIHAHFL-----RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
L QIH L R++L S L++++ L + Y +F+ + +P+ +++N+M+
Sbjct: 26 LMQIHGQLLKKGTIRNQLTVSTLLVSYARI---ELVNLAYTRVVFDSISSPNTVIWNTML 82
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+AYS + E + L+ + + + + YTF LLKAC + Q +H II+ GF
Sbjct: 83 RAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFG 142
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
++ +Y G + +F+++ RD++ N+MI G+ K G++D +F+ M
Sbjct: 143 LEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAM 202
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
E++V+SW MI + G EAL L +M + D T+ L CA LGA++ G+
Sbjct: 203 PEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGK 262
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
WIH+Y E + + V +G L D Y KCG ++ A VF ++ +K V +W A+I GLA +
Sbjct: 263 WIHTYIEKNEIKIDPV-LGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIH 321
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G+G ++ + QM G++PN TF +LT C+HAGL E+ + LF SM+ +++I P++EH
Sbjct: 322 GKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEH 381
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCMVD++GR+G ++EA + I SM ++PNAAIWG+LL++C+ H H EL + K LI L+
Sbjct: 382 YGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELD 441
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
P +SG Y+ L++IYA G W+ +R ++ + PG S I
Sbjct: 442 PDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSI 485
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 270/444 (60%), Gaps = 3/444 (0%)
Query: 36 ILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
I H S+ L+ E+ A +FN+ R ++ +NSMI G + E +K++ ++
Sbjct: 193 IFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEA 252
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ P+E T ++ +C V DL +G+ H I G E + ++++Y CG++
Sbjct: 253 EKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLT 312
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+FD M+ + ++ M+ G+ + G +D + ++ E+SVV WN +IS ++ +
Sbjct: 313 ARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQG 372
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LFHEM+ + E D+ T+V L C++LGA+D+G WIH Y E L V ++G A
Sbjct: 373 KEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV-ALGTA 431
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
LVD Y KCG + A VF+EIP++N ++W A+I GLA +G + + + +MI G+ P+
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TF+GVL+ C H GLVE+ R+ F+ M+ ++ P L+HY CMVD+LGR+G + EA +L+
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
++M + +AA+ G+L +CR +G+V++ E +L+ ++P +SGNYVLL+++Y+E W
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+A + R M + V+K+PG SL+E
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVE 635
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 202/464 (43%), Gaps = 68/464 (14%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ 59
E +L +L + L QI A + L ++ + V+ C E+ Y T+I +
Sbjct: 57 ENPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYR 116
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
++ +V +N+ I+ Y +G E L+ +L + PD +T+ LLK C G +
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G V G +++ GFE + + + SCG++ VF++ RD++ N MI G K
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK 236
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+G L I EA++++ EM + +E T++ +
Sbjct: 237 RG---------------------LAI----------EAIKIYKEMEAEKVRPNEITMIGM 265
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC----------------- 281
+ C+++ +++G+ H Y + GL + + NAL+D Y KC
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKEHGL-EFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 282 --------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G LD AR + +IP K+VV WNA+ISG +G+ + L+ +M
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQI 384
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ + P+K T V L+ C+ G ++ + + H + ++ +VD+ + G +
Sbjct: 385 RTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALGTALVDMYAKCGNIA 443
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
A + + R N W +++ HG+ + A ++I++
Sbjct: 444 RALQVFEEIPQR-NCLTWTAVICGLALHGNAQDALSYFSKMIHI 486
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 64/232 (27%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + RHKL + V + I A ++F ++ + L + ++I +L+G
Sbjct: 413 IHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGN 472
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+++ + F+ + ++GI PDE TF +L A C HG
Sbjct: 473 AQDALSYFSKMIHIGIVPDEITFLGVLSA-----------CCHG---------------- 505
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
G +++G K F EMS + + L +
Sbjct: 506 --------GLVEEGRKYFSEMSSKFNVSPKLK--------------------------HY 531
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ M+ LG++G EA L M A D A + A+ C G V IG+
Sbjct: 532 SCMVDLLGRAGHLEEAEELVKNMPMAA---DAAVLGALFFACRVYGNVQIGE 580
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 277/512 (54%), Gaps = 36/512 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFN 58
+E + LL ++ QIHA + LH L+ + C + + YA ++F+
Sbjct: 1 MEEAWVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFH 60
Query: 59 QMRNPSVLLFNSMIKAYSLN-GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
NP + N++I++ SL+ P L + + PD +TFA LKA LR
Sbjct: 61 HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLR 120
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI---------- 167
G +H + R GF+ + ++ +Y CG +VFDEMS +V+
Sbjct: 121 PGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAF 180
Query: 168 ----------------VRNL-----MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
VRNL M+ G+ K G++ +F EM R VSW+ MI
Sbjct: 181 RCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVG 240
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
+G EA F E+ + +E ++ VL CA+ GA + G+ +H + E +G +
Sbjct: 241 FAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAG-FLY 299
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V SV NAL+D Y KCG + AR VF+ +P +++VSW ++I+GLA +G GE ++L+ +M
Sbjct: 300 VGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEM 359
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
GV P+ TF+ +L C+H+GLVE+ LF+ M L+ I P +EHYGCMVD+ GR+
Sbjct: 360 EESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAAR 419
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+++AY+ I M + PNA IW +LL +C HG++E+AE L ++P NSG++VLLSN+
Sbjct: 420 LQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNV 479
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA G+W D ++R M E+++KK+PG S+IE
Sbjct: 480 YAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIE 511
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/467 (37%), Positives = 271/467 (58%), Gaps = 15/467 (3%)
Query: 20 QIHAHFLRHKLHQ----SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
QIHAH + + L + S+ ILA F + +YA +F + NP++ +NS+I +Y
Sbjct: 6 QIHAHAITNNLTRFSYISSRILAFFA--LSPRGDFRYAETLFTHIPNPNIFDYNSIITSY 63
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ N + +F + N I P+ +TF L+KAC+ + L + ++ S F
Sbjct: 64 TTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLSMKLGNSSDVYFV 123
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
S V+ ++ + +VFDE S+R+V+ ++ G+C G V++ +F +M R
Sbjct: 124 S---SVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLR 180
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-----AFELDEATVVAVLPICARLGAVDI 250
+ S++ M+S ++G SE ++LF E++ + + + A +V+VL C +GA +
Sbjct: 181 NEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEE 240
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIHSY E +GL + +G AL+DFY KCG + A VF ++P K+V +W+AMI GLA
Sbjct: 241 GKWIHSYVEENGLEYDL-ELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLA 299
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG ++ +EL+E+M G PN+ TFVGVLT C H L ++ LF M+ ++I P++
Sbjct: 300 INGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSI 359
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGC+VDVL RSG V++A I SM I P+ AIWGSLL+ C HGH EL + K LI
Sbjct: 360 EHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIE 419
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP +SG YVLL+N+YA G+W+ +R M++ V G S IE
Sbjct: 420 FEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIE 466
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 281/468 (60%), Gaps = 19/468 (4%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L Q+HA ++ + L A + S ++ YA KIF M P+ +N++I+A
Sbjct: 4 LKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRAL 63
Query: 76 S-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
S N P + + ++++ + P+ +TF + KAC LR G+ VHG ++ G +
Sbjct: 64 SESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSD 123
Query: 135 GSIRIGVVELYTSCGQMDDGMKVF---------DEMSHR------DVIVRNLMIHGFCKK 179
+ VV +Y SCG M+D ++F D + + DV++ N+MI G+ +
Sbjct: 124 EFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRI 183
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G+++ LF EM +RSVVSWN+MI+ +SG EA+ +F EM+ + T+V+VL
Sbjct: 184 GELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVL 243
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P +RLGA+++G+W+H YA + + V +G+AL+D Y KCG ++ A VF+ +P++NV
Sbjct: 244 PAMSRLGALELGKWVHLYAVRNNIGVDDV-LGSALIDMYAKCGSIEKALQVFEGLPKRNV 302
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V+W+ +I+GLA +GR + ++ +E M GV P+ T++G+L+ C+HAGLV + R F
Sbjct: 303 VTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDH 362
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + + P +EHYGCMVD+LGR+G + E+ +LI +M I+P+ IW +LL +C+ HG+VE
Sbjct: 363 MVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVE 422
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
+ + + L+ L P +SG+YV LSNIYA G W+ +R+ M+E +V
Sbjct: 423 MGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDV 470
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 267/448 (59%), Gaps = 11/448 (2%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG + A + F+ M +++ +NS+I Y NGP+ + +++F ++ + G+
Sbjct: 192 LVDMYSKCGV---VACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGV 248
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDG 154
PDE T A ++ AC +R G +H +++ R + +G +V++Y C ++++
Sbjct: 249 EPDEITLASVVSACASWSAIREGLQIHARVVKRDKYR-NDLVLGNALVDMYAKCRRVNEA 307
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
VFD M R+V+ M+ G+ + V +F M E++VVSWN +I+ ++G +
Sbjct: 308 RLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENE 367
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-----VS 269
EA+RLF ++ ++ T +L CA L + +G+ H+ G + + +
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIF 427
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
VGN+L+D Y KCG+++ VF+ + ++VVSWNAMI G A NG G +E++ +M+ G
Sbjct: 428 VGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSG 487
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
P+ T +GVL+ C+HAGLVE+ R F SM + P +H+ CMVD+LGR+GC+ EA
Sbjct: 488 QKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEA 547
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
DLI++M ++P+ +WGSLL++C+ HG++EL ++ ++L+ ++P NSG YVLLSN+YAE
Sbjct: 548 NDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAEL 607
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRW D +R MR+ V K PG S IE
Sbjct: 608 GRWKDVVRVRKQMRQRGVIKQPGCSWIE 635
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 176/371 (47%), Gaps = 9/371 (2%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D FA LL +C+ + +H II++ F I+ +V+ Y CG +D KVF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D M R+ N ++ K G +D+ +F+ M E SWN M+S + R EALR
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M + F L+E + + L CA L +++G IH+ S Y V +G+ALVD Y
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALI-SKSRYLLDVYMGSALVDMY 196
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG++ A+ F + +N+VSWN++I+ NG +E++ M+ GV P++ T
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
V++ CA + + ++ A + +L +VD+ + V EA + M +
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAE 456
R N S++ V+ A ++ N+ WN+ L Y + G ++A
Sbjct: 317 R-NVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNA-----LIAGYTQNGENEEAV 370
Query: 457 TLRMWMRENNV 467
L + ++ ++
Sbjct: 371 RLFLLLKRESI 381
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 210/502 (41%), Gaps = 107/502 (21%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
+SV ++ A +F M P +N+M+ ++ + EE ++ F + + +E
Sbjct: 92 LSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNE 151
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
Y+F L AC G+ DL +G +H I +S + + +V++Y+ CG + + FD
Sbjct: 152 YSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDG 211
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M+ VRN +VSWN +I+ ++G +AL +F
Sbjct: 212 MA-----VRN--------------------------IVSWNSLITCYEQNGPAGKALEVF 240
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M D E DE T+ +V+ CA A+ G IH+ YR + +GNALVD Y K
Sbjct: 241 VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300
Query: 281 CGILDTARNVFKEIP-------------------------------RKNVVSWNAMISGL 309
C ++ AR VF +P KNVVSWNA+I+G
Sbjct: 301 CRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGY 360
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--------FASMT 361
NG E V L+ + + + P TF +L CA+ ++ R+ F +
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS 420
Query: 362 GLHS--IVPN--LEHY--------GCMV-------DVL---------GRSGCVREAYDLI 393
G S V N ++ Y GC+V DV+ ++G A ++
Sbjct: 421 GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIF 480
Query: 394 RSMSI---RPNAAIWGSLLSSCRTHGHVELAE---HAVKELINLEPWNSGNYVLLSNIYA 447
R M + +P+ +LS+C G VE H+++ + L P ++ + ++
Sbjct: 481 RKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKD-HFTCMVDLLG 539
Query: 448 EGGRWDDAETL--RMWMRENNV 467
G D+A L M M+ +NV
Sbjct: 540 RAGCLDEANDLIQTMPMQPDNV 561
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 271/479 (56%), Gaps = 20/479 (4%)
Query: 17 HLTQIHAHFLRHKL----HQSNL----ILAHFVSVCGTLNE--------IKYATKIFNQM 60
L Q+HAH + L H S+L IL F ++ T N YA +FN++
Sbjct: 30 QLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGYALSVFNRI 89
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NPS +N+MI+A++L + +F ++ L + PD +TF LKAC + L + Q
Sbjct: 90 PNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKACSLLPALSLAQ 149
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H + + GF + ++ +Y+ + +VF+E S +DV+ N +I GF K G
Sbjct: 150 TLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFIKVG 209
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS-EALRLFHEMRDQAFELDEATVVAVL 239
D D+ LF +M R VSW +++ +SG +A++LF+ M D +V+ L
Sbjct: 210 DTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDNIALVSAL 269
Query: 240 PICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
CA+LG ++ G+ IH Y + + + +S G LVD Y KCG ++TAR +F+ P KN
Sbjct: 270 SACAQLGELEQGKSIHVYIKQNRIPINAFLSTG--LVDLYAKCGCIETAREIFESSPDKN 327
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+ +WNA++ GL +GRG L + + +MI G+ P+ +F+G+L C HAGLV +AR F
Sbjct: 328 LFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARNFFQ 387
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M ++ + L+HYGCM D+LGR+G +REA ++I M + + +WG +L CR HG+V
Sbjct: 388 EMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHGNV 447
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+AE A + ++ L P + G Y ++++IYA GRW+D +R M VKK+PG SL++
Sbjct: 448 EIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPGCSLVQ 506
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 272/477 (57%), Gaps = 26/477 (5%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLH---QSNLILA----HFVSVCGTLNEIKYATKIFNQM 60
LL R L ++ + L H LH S++ ++ H + CG L+ A K+F++
Sbjct: 84 LLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDG---ARKMFDKS 140
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++ +NSMI Y G + E + + +K GI PDE T ++ +C + DL +G+
Sbjct: 141 CVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGR 200
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H I +G + + ++++Y CG ++ K+FD M+++ ++ M
Sbjct: 201 ESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM-------- 252
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
LF EM ++ VV WN MI + R EAL LF+EM+ DE T+V+ L
Sbjct: 253 -------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 305
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C++LGA+D+G WIH Y E L V ++G AL+D Y KCG + A VF+E+P +N +
Sbjct: 306 ACSQLGALDVGIWIHHYIEKHELSLNV-ALGTALIDMYAKCGKITKAIQVFQELPGRNSL 364
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+W A+ISGLA +G + + +MI V P++ TF+G+L+ C H GLVE+ R+ F+ M
Sbjct: 365 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 424
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ P L+HY CMVD+LGR+G + EA +LI+SM I +A +WG+L +CR HG+V +
Sbjct: 425 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLM 484
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A +L+ ++P +SG YVLL+N+Y E W +A R MR+ V+K+PG S IE
Sbjct: 485 GERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIE 541
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 192/399 (48%), Gaps = 51/399 (12%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLL 107
++ Y T I RNP+ +N I+ + + E V L+ +L+ G PD YT+ L
Sbjct: 27 DLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 86
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
KAC + +R+G + G ++ GF+ + V+ L SCG +D K+FD+ RD++
Sbjct: 87 KACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLV 146
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N MI+G+ ++G W EAL + EM+ +
Sbjct: 147 SWNSMINGYVRRG-------------------WAY------------EALNFYREMKVEG 175
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ DE T++ V+ CA+L +D+G+ H Y E +GL + V + NAL+D Y KCG L++A
Sbjct: 176 IKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGL-KLTVPLANALMDMYMKCGNLESA 234
Query: 288 RN----------------VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
R +F E+P K+VV WNAMI G RG+ + L+ +M A ++
Sbjct: 235 RKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNIN 294
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ T V L+ C+ G ++ + + H + N+ ++D+ + G + +A
Sbjct: 295 PDEVTMVSCLSACSQLGALDVGIWIHHYIEK-HELSLNVALGTALIDMYAKCGKITKAIQ 353
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ + + R N+ W +++S HG+ A E+I+
Sbjct: 354 VFQELPGR-NSLTWTAIISGLALHGNAHGAIAYFSEMID 391
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 263/472 (55%), Gaps = 48/472 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIF--NQMRNP----SVLLFNSMIK 73
QIH+ L+ LH + L+L F + N + YA+ + N P LFN++I+
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199
Query: 74 AYSLNGPSE-EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
A++ S+ ++ + ++ + P+++TF +LKAC G+ L +G VH +++ GFE
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259
Query: 133 RFGSIRIGVVELYTSCGQMDDG-------MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+R +V +Y C Q DG KVFDE +D
Sbjct: 260 EDPHVRNTLVHMYCCCCQ--DGSSGPVSAKKVFDESPVKDS------------------- 298
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
V+W+ MI ++G + A+ LF EM+ DE T+V+VL CA L
Sbjct: 299 ------------VTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADL 346
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+++G+W+ SY E + R V + NAL+D + KCG +D A VF+E+ + +VSW +M
Sbjct: 347 GALELGKWLESYIERKNIMRSV-ELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSM 405
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I GLA +GRG V ++++M+ +GV P+ F+GVL+ C+H+GLV+K F +M + S
Sbjct: 406 IVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFS 465
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
IVP +EHYGCMVD+L R+G V EA + +R+M + PN IW S++++C G ++L E
Sbjct: 466 IVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVA 525
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
KELI EP + NYVLLSNIYA+ RW+ +R M ++K PG ++IE
Sbjct: 526 KELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIE 577
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 270/537 (50%), Gaps = 70/537 (13%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
LH H+ QIHA ++ LHQ I ++ N + A +FNQ+ +P+V L+
Sbjct: 29 LHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLY 88
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGD-LRVGQCVHG 124
N +I+AYSL+G + F +L + G+ D +T+ LLK C G L + + VH
Sbjct: 89 NYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHA 148
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQ-------------------------------MDD 153
+ + GF + +++ Y CG +D
Sbjct: 149 HVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDG 208
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM---------- 203
+KVFDEM RD + N M+ GF K G++DK LF M ER +VSW+ M
Sbjct: 209 ALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDM 268
Query: 204 ---------------------ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
IS + G+ EA+ L EM LD+ +++L C
Sbjct: 269 DMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAAC 328
Query: 243 ARLGAVDIGQWIH-SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVV 300
A G + +G+ +H S+ S +R V N+ +D Y KCG +D A VF + K++V
Sbjct: 329 AESGMLGLGKKMHDSFLRSR--FRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLV 386
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+MI G +G GE +EL+ M+ +G P++ TF+G+L C HAGLV + R F SM
Sbjct: 387 SWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSM 446
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++ IVP +EHYGCMVD+LGR G ++EA+ L+RSM PNA I G+LL +CR H V+L
Sbjct: 447 QRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKL 506
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A K L L P + GN+ LLSNIYA+ G W + +R M + +K G S IE
Sbjct: 507 ATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIE 563
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 267/481 (55%), Gaps = 12/481 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRN 62
L G N QIH+ + I L S CG +N+ A ++F++M +
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVND---AQQVFDEMGD 215
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
+V+ +NS+I Y NGP+ E +K+F ++ + PDE T A ++ AC + ++VGQ V
Sbjct: 216 RNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 123 HGEIIRSGFERFGSI-RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H +++ R I V++Y C ++ + +FD M R+VI M+ G+
Sbjct: 276 HARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAAS 335
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+F +M ER+VVSWN +I+ ++G + EAL LF ++ ++ T +L
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKA 395
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIPR 296
CA L + +G H + G + + VGN+L+D Y KCG ++ VF+++
Sbjct: 396 CADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++ VSWNAMI G A NG G +EL+ +M+ G P+ T +GVL+ C HAG VE+ R
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F+SMT + P +HY CMVD+LGR+G + EA +I M ++P++ IWGSLL++C+ H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHR 575
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++ L ++ ++L +E NSG YVLLSN+YAE G+W DA +R MR+ V K PG S I
Sbjct: 576 NITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Query: 477 E 477
+
Sbjct: 636 K 636
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 187/371 (50%), Gaps = 16/371 (4%)
Query: 103 FAPLLKAC----LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
FA LL +C L D+R CVH +I+SGF I+ +++ Y CG ++DG ++F
Sbjct: 22 FAKLLDSCIKLKLSAIDVR---CVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLF 78
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D+M R+V N ++ G K G +D+ LFR M ER +WN M+S + R EAL
Sbjct: 79 DKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALY 138
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F M + F L+E T + L C+ L ++ G IHS S V +G+ALVD Y
Sbjct: 139 YFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVY-IGSALVDMY 197
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG ++ A+ VF E+ +NVVSWN++I+ NG +++++ M+ V P++ T
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLA 257
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
V++ CA ++ +E+ A + + + ++ VD+ + ++EA + SM I
Sbjct: 258 SVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAE 456
R N S++S + A ++ N+ WN+ L Y + G ++A
Sbjct: 318 R-NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNA-----LIAGYTQNGENEEAL 371
Query: 457 TLRMWMRENNV 467
+L ++ +V
Sbjct: 372 SLFCLLKRESV 382
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 180/422 (42%), Gaps = 71/422 (16%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A +F M +NSM+ ++ + EE + FA++ G +EYTFA
Sbjct: 100 GFLDE---ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFA 156
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L AC G+ D+ G +H I +S I +V++Y+ CG ++D +VFDEM R
Sbjct: 157 SGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR 216
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+V+ SWN +I+ ++G EAL++F M
Sbjct: 217 NVV-------------------------------SWNSLITCYEQNGPAVEALKVFQVML 245
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ E DE T+ +V+ CA L A+ +GQ +H+ R + + NA VD Y KC +
Sbjct: 246 ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRI 305
Query: 285 DTARNVFKEIP-------------------------------RKNVVSWNAMISGLAFNG 313
AR +F +P +NVVSWNA+I+G NG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCA-----HAGLVEKARELFASMTGLHSIVP 368
E + L+ + + V P TF +L CA H G+ L
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEED 425
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ ++D+ + GCV E Y + R M R + W +++ +G+ A +E+
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 429 IN 430
++
Sbjct: 485 LD 486
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 267/450 (59%), Gaps = 2/450 (0%)
Query: 29 KLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKL 87
++ + N+I ++ + + G ++ A K+FN+M+ ++ ++++I Y N EE + L
Sbjct: 217 RMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALIL 276
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F + GI DE +L AC + + G+ VHG +++ G E + +++ ++ +Y+S
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
C ++ K+F E D I N MI G+ K G+++K LF M ++ VSW+ MIS
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+ R +E L LF EM+ + + DE +V+V+ C L A+D G+WIH+Y +GL +
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINI 456
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
+ +G L++ Y K G ++ A VFK + K V +WNA+I GLA NG + ++ + +M
Sbjct: 457 I-LGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE 515
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
GV+PN+ TFV VL C H GLV++ F SM H I PN++HYGCMVD+LGR+G ++
Sbjct: 516 HGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLK 575
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA +LI SM + P+ + WG+LL +C+ +G E E ++L+ L P + G VLLSNIYA
Sbjct: 576 EAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYA 635
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G W D +R MR++ V K+PG S+IE
Sbjct: 636 SKGNWVDVLEVRGMMRQHGVVKTPGCSMIE 665
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 204/450 (45%), Gaps = 81/450 (18%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I + +IF+ + NP+ + N+M+K Y + + ++ + + D YT+ L ++
Sbjct: 76 INQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQS 135
Query: 110 CLGVGDLRV----GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD------ 159
C +R+ G+C+ +++ GF+ I+ ++ +Y CG + D KVFD
Sbjct: 136 C----SIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLD 191
Query: 160 -------------------------EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
M R+VI N MI F KKG+V++ LF EM++
Sbjct: 192 MVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQ 251
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ +VSW+ +IS ++ EAL LF EM +DE V++VL C+RL V G+ +
Sbjct: 252 KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLV 311
Query: 255 HSYAESSGLYRKVVSVGNALVDF-------------------------------YCKCGI 283
H G+ V++ NAL+ Y KCG
Sbjct: 312 HGLVVKVGI-ETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGE 370
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ AR +F +P K+ VSW+AMISG A R + L+++M +G P++ V V++
Sbjct: 371 IEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISA 430
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H +++ + + A + + + N+ ++++ + GCV +A ++ + + +
Sbjct: 431 CTHLAALDQGKWIHAYIRK-NGLKINIILGTTLINMYMKLGCVEDALEVFKGLE-EKGVS 488
Query: 404 IWGSLLSSCRTHGHV--------ELAEHAV 425
W +L+ +G V E+ EH V
Sbjct: 489 TWNALILGLAMNGLVDKSLKTFSEMKEHGV 518
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 48/295 (16%)
Query: 124 GEIIRSGF--ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
++I SGF + F + R+ ++ ++F + + + + N M+ G+ ++
Sbjct: 47 SQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNS 106
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
K +++++ M E +V + D T +
Sbjct: 107 PCKAIWVYKFMLESNVAA-------------------------------DNYTYPILFQS 135
Query: 242 CA-RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C+ RL D G+ I + G + V + N L++ Y CG L AR VF ++V
Sbjct: 136 CSIRLAEFD-GKCIQDHVLKVG-FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMV 193
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+M++G G E ++Y++M + V + + V G VE+A +LF M
Sbjct: 194 SWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIV----LFGKKGNVEEACKLFNEM 249
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSC 412
+L + ++ ++ EA L + M+ I + + S+LS+C
Sbjct: 250 KQ-----KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSAC 299
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IHA+ ++ L + ++ +++ L ++ A ++F + V +N++I ++NG
Sbjct: 443 IHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGL 502
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ-----CVHGEIIRSGFERFG 135
++ +K F+ +K G+ P+E TF +L AC +G + G + I + +G
Sbjct: 503 VDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYG 562
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK-GDVDKGLYLFREMRE 194
+ V+L G + + ++ + M + + G CKK GD + G + R++ E
Sbjct: 563 CM----VDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVE 618
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 268/484 (55%), Gaps = 12/484 (2%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRH---KLHQSNLILAHFVSVCGTLNEIK-------YAT 54
I++L+ T + L Q+HA+ + + H S +L F+ T + K YA
Sbjct: 19 IIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAK 78
Query: 55 KIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
IFN ++NPS +N++I+ ++L + F ++ L + D ++F LKAC +G
Sbjct: 79 SIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACAQLG 138
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+ +C+H ++++ GF + ++ Y +D KVFDE RDV+ N++I
Sbjct: 139 GVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSYNVLID 198
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
GF K GDV K LF M R VSWN +I+ K EA+ LF M D D
Sbjct: 199 GFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPDNVA 258
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+V+ L CA+LG ++ G+ IH Y E + + + + LVDFY KCG +D A +F
Sbjct: 259 LVSTLSACAQLGELEKGKKIHDYIERNAM-KVDTFLSTGLVDFYAKCGCVDIALKIFDSS 317
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
KN+ +WNAM+ GLA +G GEL +E + +MI GV P+ + +GVL C+H+GLV++AR
Sbjct: 318 SDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLVDEAR 377
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+LF M ++ + +HYGCM D+LGR+G +++ ++I+ M + ++W LL CR
Sbjct: 378 KLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLLGGCRI 437
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN-VKKSPGQ 473
HG VE+AE A K L+ L+P + G Y +L+N+YA RW+D +R + N V K G
Sbjct: 438 HGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTKIAGF 497
Query: 474 SLIE 477
SLI+
Sbjct: 498 SLIQ 501
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 267/440 (60%), Gaps = 5/440 (1%)
Query: 39 HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIW 97
HF++VC ++ E A K+F+ ++ +N++I Y G E +++F ++ + +
Sbjct: 163 HFLAVCSSMAE---ARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVT 219
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PDE T ++ + DL +G+ +HG + G + V+++Y CG ++ V
Sbjct: 220 PDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSV 279
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+ + + ++ MI G+ + G +D +F EM ER V WN +++ + R EAL
Sbjct: 280 FEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEAL 339
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
RLFH+M++ E D+ T+V +L C++LGA+++G W+H Y + + V+ +G LVD
Sbjct: 340 RLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVM-LGTNLVDM 398
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG ++ A VFKEIP KN ++W AMISGLA +G ++ ++ +++MI G+ P++ TF
Sbjct: 399 YSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITF 458
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL+ C HAGLV++ +E F+ M + + ++HY CMVD+LGR+G + EA L+ +M
Sbjct: 459 IGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMP 518
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ P+A +WG+L +CR HG++ L E A +L+ L+P +SG YVLL+N+YAE A+
Sbjct: 519 MEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADK 578
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R+ MR V+K PG S IE
Sbjct: 579 VRVMMRHLGVEKVPGCSCIE 598
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 157/375 (41%), Gaps = 84/375 (22%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PD TF LLKAC + + G V G ++ GF + + C M + K+
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FD RD++ N +I G+ ++G + L +F W +
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMF----------WRM--------------- 212
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
+ D A DE T++ V+ A+L +++G+ +H Y ES G+ R V + N ++D
Sbjct: 213 -----VGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGV-RCTVRLMNVVMDM 266
Query: 278 YCKC-------------------------------GILDTARNVFKEIPRKNVVSWNAMI 306
Y KC G++D AR VF E+P ++V WNA++
Sbjct: 267 YIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALM 326
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE----------KAREL 356
+G RG+ + L+ M V P+ T V +L+ C+ G +E + R
Sbjct: 327 TGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVS 386
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ M G + +VD+ + G + +A + + + + NA W +++S HG
Sbjct: 387 LSVMLGTN-----------LVDMYSKCGNIEKAIRVFKEIPEK-NALTWTAMISGLANHG 434
Query: 417 HVELAEHAVKELINL 431
H ++A + +I L
Sbjct: 435 HADVAIKYFQRMIEL 449
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 1/142 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + R ++ S ++ + V + I+ A ++F ++ + L + +MI + +G
Sbjct: 376 VHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGH 435
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII-RSGFERFGSIRI 139
++ +K F + LG+ PDE TF +L AC G ++ GQ ++ + ER
Sbjct: 436 ADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYS 495
Query: 140 GVVELYTSCGQMDDGMKVFDEM 161
+V+L G +D+ + + M
Sbjct: 496 CMVDLLGRAGYLDEAEHLVNTM 517
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 248/422 (58%), Gaps = 2/422 (0%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+ +Q V+ + S+I AYS + E V F + + GI PDE T +L AC + D
Sbjct: 195 LLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD 254
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR-NLMIH 174
L +G+ +H + G ++ + ++++Y CG +VFD + N +I
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIID 314
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+CK G VD LF EM R ++++N M++ SG+ EAL LF MR +D T
Sbjct: 315 GYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFT 374
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
VV +L CA LGA+ G+ +H+ E L + +G AL+D Y KCG +D A VF+ +
Sbjct: 375 VVNLLTACASLGALQQGRALHACIEQR-LVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+++V +W AMI+GLAFNG G+ +E + QM G PN +++ VLT C+H+ L+ + R
Sbjct: 434 GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR 493
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F M L++I P +EHYGCM+D+LGRSG + EA DL+++M I+PNA IW S+LS+CR
Sbjct: 494 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRV 553
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H H++LA+ A + L+ LEP G YV L NIY + +W++A +RM M E VKK+ G S
Sbjct: 554 HKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYS 613
Query: 475 LI 476
I
Sbjct: 614 SI 615
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 199/440 (45%), Gaps = 49/440 (11%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQ-SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LH R T + +H RH L+ N + H + ++YA +F++M PS L
Sbjct: 18 LHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPL-------HLRYALHLFDRM-PPSTFL 69
Query: 68 FNSMIKAYSLNGPS-EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG---DLRVGQCVH 123
F++ ++A S G P LF ++ G+ PD +TF L K L + +H
Sbjct: 70 FDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLH 129
Query: 124 GEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
+R+ + ++ +Y G D + FDE+ +D + ++I G K G +
Sbjct: 130 AACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGML 189
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
L + R V+SW +I++ ++ R EA+ F M DE TV+AVL C
Sbjct: 190 CDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSAC 249
Query: 243 ARLGAVDIGQWIHSYAESSG-------------LYRKVVSVG------------------ 271
A+L +++G+ +H E G +Y K G
Sbjct: 250 AKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSW 309
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NA++D YCK G +D AR++F E+ ++++++N+M++G +G+ + L+ M +
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAY 390
+ T V +LT CA G +++ R L A + +V + G ++D+ + G V EA
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIE--QRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 391 DLIRSMSIRPNAAIWGSLLS 410
+ + M R + W ++++
Sbjct: 428 IVFQRMGKR-DVHTWTAMIA 446
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 36/262 (13%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A +F++M ++ FNSM+ Y +G E + LF ++ + D +T LL A
Sbjct: 322 VDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTA 381
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C +G L+ G+ +H I + E + ++++Y CG++D+ VF M RD
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD---- 437
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V +W MI+ L +G AL F++MR F+
Sbjct: 438 ---------------------------VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTA 287
+ + +AVL C+ ++ G+ + E LY + + ++D + G+LD A
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLY--FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 528
Query: 288 RNVFKEIP-RKNVVSWNAMISG 308
++ K +P + N V W +++S
Sbjct: 529 MDLVKTMPIQPNAVIWASILSA 550
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 261/461 (56%), Gaps = 1/461 (0%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H H L+ I + + G E+ YA K+F++M + ++ +NS+I YS
Sbjct: 175 HGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYS 234
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+E + LF L++ + D T ++ AC + + V + I +
Sbjct: 235 QCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVY 294
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y G +D +VFD M ++++ N M+ G+ GD+ LF EM R+
Sbjct: 295 LGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRN 354
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
V+SW MIS ++ + S+AL+LF EM D + DE TV +VL C+ LG +D GQ +H
Sbjct: 355 VISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHE 414
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + V VGNAL+D YCKCG++D A VF ++ +K+ VSW +MI GLA NG +
Sbjct: 415 YMCRHDI-KSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVD 473
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
EL+ QM+ G+ P +F+G+L C HAGLV+K E F SM ++ + P ++HYGC+
Sbjct: 474 NVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCV 533
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L RSG + AY+ I+ M + P+ +W LLS+C+ H ++ LAE A +L+ L+P NS
Sbjct: 534 VDLLSRSGELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNS 593
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYVLLSN YA RWDDA +R M +V+K S IE
Sbjct: 594 GNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQKPSSWSSIE 634
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 215/442 (48%), Gaps = 34/442 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQI-------------HAHFLRHKLHQ-----SNLILAHFVS 42
+ R I RL +T QI HAH +R H+ SN+I ++ +S
Sbjct: 43 LRRPISRLFTSSSTTRKCQQIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALS 102
Query: 43 VCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN-GPSEEPVKLFALLKNLGIWPDEY 101
LN+ +A F Q+ P++L+FN +I+ S + P+E V L+ N GI D
Sbjct: 103 R-SHLNKANFA---FIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNL 158
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
TF L KAC V D+ GQ H ++++ GF + I ++ +Y G++ KVFD+M
Sbjct: 159 TFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKM 218
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL----MISSLGKSGRDSEAL 217
RD++ N +I G+ + + L LF MRE +V + ++ +I + D
Sbjct: 219 DDRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVD 278
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
+ + D+ ++D +++ + R G VD+ + + + + +VS NA++
Sbjct: 279 SMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQE----KNIVS-WNAMLTG 333
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y G L A+ +F E+P +NV+SW MISG A + ++L+++M+ V P++ T
Sbjct: 334 YATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITV 393
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
VL+ C+H GL++ + + M H I ++ ++D+ + G V +A ++ M
Sbjct: 394 SSVLSACSHLGLLDTGQTVHEYMCR-HDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMK 452
Query: 398 IRPNAAIWGSLLSSCRTHGHVE 419
+ ++ W S++ +G V+
Sbjct: 453 -KKDSVSWTSMILGLAVNGFVD 473
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 253/415 (60%), Gaps = 4/415 (0%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
+ CG + + A ++F+ M + ++ + M+ Y EE + LF +K + PD+
Sbjct: 115 AACGRVED---ARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQV 171
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
A +L C +LR G+ +H ++ S + ++ +Y SC M+ K+++ +
Sbjct: 172 IIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRV 231
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
S +++++ M++G+ K G V+ +F M + VVSW+ MI+ +S + EAL LFH
Sbjct: 232 SEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFH 291
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
+M+ + DE T+++V+ CA +GA++ + IHS+ E+ + K++ +GNAL+D + KC
Sbjct: 292 DMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMC-KILPIGNALIDMFSKC 350
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G L A +VF +P+KNVV+W ++I+ A +G G + L+E M ++G+ PN TF+G+L
Sbjct: 351 GSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLL 410
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C HAGLVE+ R LF M + I P EHYGCMVD+LGR+ + +A DLI+SM +RPN
Sbjct: 411 YACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPN 470
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
IWGSLL++CR HG +EL A K+++ L+P + G VLLSNIYAE G W+D +
Sbjct: 471 VVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVK 525
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 160/331 (48%), Gaps = 12/331 (3%)
Query: 91 LKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
L+ +G+ P LL+A L HG R G E G + +V Y +CG
Sbjct: 59 LRRVGLPAPGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG 118
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+++D +VFD M RD++ +M+ +C+ + ++ L LF M+ VV ++I+++
Sbjct: 119 RVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLS 178
Query: 210 SGRDSEALRLFHEMRDQAFE----LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+ + LR + +D A++ + A +++ + +++
Sbjct: 179 TCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVS-----E 233
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
K + + +V Y K G ++ A ++F +P K+VVSW+AMI+G A + + + L+ M
Sbjct: 234 KEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDM 293
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
GV P++ T + V++ CA+ G +EKAR + S HS+ L ++D+ + G
Sbjct: 294 QRSGVKPDEITMLSVISACANVGALEKARCIH-SFVENHSMCKILPIGNALIDMFSKCGS 352
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ A D+ +M + N W S++++ HG
Sbjct: 353 LTLALDVFNAMP-QKNVVTWTSIITASAMHG 382
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG+L A +FN M +V+ + S+I A +++G + LF +K+ GI
Sbjct: 343 LIDMFSKCGSLT---LALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGI 399
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQ 120
P+ TF LL AC G + G+
Sbjct: 400 QPNGVTFLGLLYACCHAGLVEEGR 423
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/473 (36%), Positives = 276/473 (58%), Gaps = 15/473 (3%)
Query: 14 TRTHLTQIHAHFLRHKLHQ----SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
T QIHAH + + L + S+ ILA F + + +YA +F M NP++ +N
Sbjct: 36 TMKQTKQIHAHAIANNLTRFSYISSRILAFFAA--SPRGDFRYAETLFTHMPNPNIFDYN 93
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
S+I +Y+ N ++ + +F + N+ I P+ +TF L+K+C+ + L + V ++S
Sbjct: 94 SIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSL---EQVFTLTMKS 150
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G V+ +++ G + +VFDE S+R+V+ ++ G+C G V++ +F
Sbjct: 151 GNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVF 210
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-----FELDEATVVAVLPICAR 244
+M +R+ S + M+S ++ SE ++LF E++ + + + A +V+VL C
Sbjct: 211 DKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTV 270
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+GA + G+WIHSY E +GL + +G AL+DFY KCG + A VF ++ K+V +W+A
Sbjct: 271 MGAFEEGKWIHSYVEENGLEYDL-ELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSA 329
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA NG ++ +EL+E+M G PN+ TFVGVLT C H L ++ LF M+ +
Sbjct: 330 MILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKY 389
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
+I P++EHYGC+VD+L RSG V++A I SM I P+ AIWGSLL+ C HGH EL +
Sbjct: 390 NITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKV 449
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K LI +P +SG YVLL+N+YA G+W+ +R M++ V G S IE
Sbjct: 450 GKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIE 502
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/422 (39%), Positives = 248/422 (58%), Gaps = 2/422 (0%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+ +Q V+ + S+I AYS + E V F + + GI PDE T +L AC + D
Sbjct: 195 LLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKD 254
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR-NLMIH 174
L +G+ +H + G ++ + ++++Y CG +VFD + N +I
Sbjct: 255 LELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIID 314
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+CK G VD LF EM R ++++N M++ SG+ EAL LF MR +D T
Sbjct: 315 GYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFT 374
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
VV +L CA LGA+ G+ +H+ E L + +G AL+D Y KCG +D A VF+ +
Sbjct: 375 VVNLLTACASLGALQQGRALHACIEQR-LVEADIYLGTALLDMYMKCGRVDEATIVFQRM 433
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+++V +W AMI+GLAFNG G+ +E + QM G PN +++ VLT C+H+ L+ + R
Sbjct: 434 GKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGR 493
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F M L++I P +EHYGCM+D+LGRSG + EA DL+++M I+PNA IW S+LS+CR
Sbjct: 494 LYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRV 553
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H H++LA+ A + L+ LEP G YV L NIY + +W++A +RM M E VKK+ G S
Sbjct: 554 HKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYS 613
Query: 475 LI 476
I
Sbjct: 614 SI 615
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 199/440 (45%), Gaps = 49/440 (11%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQ-SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LH R T + +H RH L+ N + H + ++YA +F++M PS L
Sbjct: 18 LHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPL-------HLRYALHLFDRM-PPSTFL 69
Query: 68 FNSMIKAYSLNGPS-EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG---DLRVGQCVH 123
F++ ++A S G P LF ++ G+ PD +TF L K L + +H
Sbjct: 70 FDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLH 129
Query: 124 GEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
+R+ + ++ +Y G D + FDE+ +D + ++I G K G +
Sbjct: 130 AACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGML 189
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
L + R V+SW +I++ ++ R EA+ F M DE TV+AVL C
Sbjct: 190 CDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSAC 249
Query: 243 ARLGAVDIGQWIHSYAESSG-------------LYRKVVSVG------------------ 271
A+L +++G+ +H E G +Y K G
Sbjct: 250 AKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSW 309
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NA++D YCK G +D AR++F E+ ++++++N+M++G +G+ + L+ M +
Sbjct: 310 NAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLR 369
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAY 390
+ T V +LT CA G +++ R L A + +V + G ++D+ + G V EA
Sbjct: 370 VDNFTVVNLLTACASLGALQQGRALHACIE--QRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 391 DLIRSMSIRPNAAIWGSLLS 410
+ + M R + W ++++
Sbjct: 428 IVFQRMGKR-DVHTWTAMIA 446
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 36/262 (13%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A +F++M ++ FNSM+ Y +G E + LF ++ + D +T LL A
Sbjct: 322 VDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTA 381
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C +G L+ G+ +H I + E + ++++Y CG++D+ VF M RD
Sbjct: 382 CASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRD---- 437
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V +W MI+ L +G AL F++MR F+
Sbjct: 438 ---------------------------VHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTA 287
+ + +AVL C+ ++ G+ + E LY + + ++D + G+LD A
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLY--FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 528
Query: 288 RNVFKEIP-RKNVVSWNAMISG 308
++ K +P + N V W +++S
Sbjct: 529 MDLVKTMPIQPNAVIWASILSA 550
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 248/441 (56%), Gaps = 35/441 (7%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H + CG ++ A +F+ ++ V+ +N+MI Y NG +E V++F + +
Sbjct: 212 LIHMYASCG---DVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRA 268
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
DE T + AC +GD +GQ + G R ++ +V++Y CG++D
Sbjct: 269 PFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELD---- 324
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
K LF M R VV+W+ MIS +S R EA
Sbjct: 325 ---------------------------KARRLFDRMHSRDVVAWSAMISGYTQSDRCREA 357
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L +F+EM+ ++ T+V+VL CA LGA++ G+W+HSY L V+ +G ALVD
Sbjct: 358 LAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI-LGTALVD 416
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
FY KCG + A F+ +P +N +W A+I G+A NGR +EL+ M+ + P T
Sbjct: 417 FYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVT 476
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL C+H LVE+ R F SMT + I P +EHYGCMVD+LGR+G + EAY IR+M
Sbjct: 477 FIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNM 536
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
I PNA +W +LLS+C H +VE+ E A+K+++ L+P +SGNY+LLSN YA G+W +A
Sbjct: 537 PIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAA 596
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M+E V+K PG SLIE
Sbjct: 597 MVRKEMKEKGVEKIPGCSLIE 617
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 41/390 (10%)
Query: 50 IKYATKIFNQMRNP--SVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPL 106
+ YA ++F +P S +N +I+++ G E+ + LF +L + + PD++T A
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+K+C + DL VG+ V + GF D
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGF-------------------------------MVDQ 206
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
V N +IH + GDV LF ++ + V++WN MI+ K+G E + +F M +
Sbjct: 207 FVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEV 266
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
DE T+++V C RLG ++GQWI YAE G+ R ++ ALVD Y KCG LD
Sbjct: 267 RAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRS-RNLATALVDMYAKCGELDK 325
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR +F + ++VV+W+AMISG + R + ++ +M V+PN T V VL+ CA
Sbjct: 326 ARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAV 385
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
G +E + + + + +P G +VD + GC+++A SM +R N W
Sbjct: 386 LGALETGKWVHSYIR--RKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVR-NTWTW 442
Query: 406 GSLLSSCRTHGHVELAEHAVKELI--NLEP 433
+L+ ++G A ++ N+EP
Sbjct: 443 TALIKGMASNGRSREALELFSSMLEANIEP 472
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 11 GRNTRTHLTQIHAHFLRHK--LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
GR +L Q A + K L NL A V + E+ A ++F++M + V+ +
Sbjct: 283 GRLGDANLGQWIAEYAEEKGMLRSRNLATA-LVDMYAKCGELDKARRLFDRMHSRDVVAW 341
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
++MI Y+ + E + +F ++ + P++ T +L AC +G L G+ VH I R
Sbjct: 342 SAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRR 401
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ +V+ Y CG + D +K F+ M R+ +I G
Sbjct: 402 KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKG------------- 448
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
+ +GR EAL LF M + E + T + VL C+ V
Sbjct: 449 ------------------MASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 249 DIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMI 306
+ G + S + G+ ++ G +VD + G++D A + +P N V W A++
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYG-CMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549
Query: 307 SGLAFNGRGELGVELYEQMI 326
S + E+G E +Q++
Sbjct: 550 SACTVHKNVEIGEEALKQIV 569
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 247/444 (55%), Gaps = 36/444 (8%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
LR + + LI + + C + A ++F ++ + +N+MI Y+ +G EE +
Sbjct: 195 LRDAVSFTALITGYTLRGC-----LDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEAL 249
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELY 145
F +K + P+E T +L AC G L +G V I G + ++++Y
Sbjct: 250 AFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMY 309
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
+ CG D+DK LF + E+ ++SWN+MI
Sbjct: 310 SKCG-------------------------------DLDKARDLFEGICEKDIISWNVMIG 338
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
EAL LF +M+ E ++ T V++LP CA LGA+D+G+WIH+Y + L
Sbjct: 339 GYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGL 398
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
S+ +L+D Y KCG ++ A+ VF + K++ SWNAMISGLA +G + +EL+ QM
Sbjct: 399 TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQM 458
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+G P+ TFVGVL+ C+HAGLVE R+ F+SM + I P L+HYGCM+D+LGR+G
Sbjct: 459 RDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGL 518
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
EA L+++M ++P+ AIWGSLL +CR HG+VEL E A K L LEP N G YVLLSNI
Sbjct: 519 FDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578
Query: 446 YAEGGRWDDAETLRMWMRENNVKK 469
YA GRWDD +R + + +KK
Sbjct: 579 YATAGRWDDVARIRTKLNDKGMKK 602
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 218/425 (51%), Gaps = 4/425 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNP 63
L LL + +L QIH+ ++ LH + L+ + C + YA +F + P
Sbjct: 36 LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ ++N+MI+ SL+ + + + G+ P+ YTF LLK+C VG + G+ +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G +++ G E + ++ +Y G++ VF + S RD + +I G+ +G +D
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF E+ R VSWN MI+ +SGR EAL F EM+ +E+T+V VL CA
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+ G++++G W+ S+ E GL + V NAL+D Y KCG LD AR++F+ I K+++SWN
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLV-NALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MI G + + + L+ +M V PN TFV +L CA+ G ++ + + A +
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ N + ++D+ + G + A + M + + W +++S HGH +A
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK-SLGSWNAMISGLAMHGHANMALE 453
Query: 424 AVKEL 428
+++
Sbjct: 454 LFRQM 458
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 244/412 (59%), Gaps = 1/412 (0%)
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+++N++I ++ +G E F + T+ +L AC DL +G VH
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++ SG + +V++Y CG MD +F+ M R + +I G + G VD+
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF M ER ++W MI + GR +AL F M+ DE T+V+V+ CA+L
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA++ G+W Y G+ V VGNAL+D Y KCG ++ A +VFK++ ++ +W A+
Sbjct: 307 GALETGEWARIYMGRLGIKMDVF-VGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAI 365
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I GLA NGRGE ++++ +M+ +P++ TFVGVLT C HAGLV+K RE F SMT ++
Sbjct: 366 ILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYN 425
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P + HYGC++DVLGR+G ++EA D I M ++PN+ IWG+LL+SCR +G+ E+ E A
Sbjct: 426 ISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAA 485
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L+ L+P NS Y+LLSN+YA+ RW D +R + E +KK PG S+IE
Sbjct: 486 ERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIE 537
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 39/305 (12%)
Query: 37 LAHFVSVCGTL---NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
+A + SV L ++ A +F+ M + + +MI Y G + ++ F ++
Sbjct: 227 MASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI 286
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ DE+T ++ AC +G L G+ + R G + + ++++Y+ CG ++
Sbjct: 287 CKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIER 346
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+ VF +M +RD +W +I L +GR
Sbjct: 347 ALDVFKDMHNRDKF-------------------------------TWTAIILGLAVNGRG 375
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGN 272
EA+ +F+ M DE T V VL C G VD G ++ S E+ + VV G
Sbjct: 376 EEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYG- 434
Query: 273 ALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
L+D + G L A + ++P K N W +++ G E+G E+++ +
Sbjct: 435 CLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLE--LD 492
Query: 332 PNKAT 336
P+ +T
Sbjct: 493 PDNST 497
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 146/354 (41%), Gaps = 20/354 (5%)
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLK-----ACLGVGDLRVGQCVHGEIIRSGFERFG 135
+EE V + + G PD YTF LLK V VG +H +++ G E
Sbjct: 32 AEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNA 91
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRD----VIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ +Y + G V + ++ N +I G + G + F +
Sbjct: 92 HAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVD 151
Query: 192 MRERS----VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
M S V++ ++S+ GK +++ + + D+ A++ + A G
Sbjct: 152 MVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGD 211
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+D W+ G+ + ++ +++ + G +D AR++F +P ++ ++W AMI
Sbjct: 212 MD-AAWVL----FEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMID 266
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G GR +E + M V ++ T V V+T CA G +E E G I
Sbjct: 267 GYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETG-EWARIYMGRLGIK 325
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ ++D+ + G + A D+ + M R + W +++ +G E A
Sbjct: 326 MDVFVGNALIDMYSKCGSIERALDVFKDMHNR-DKFTWTAIILGLAVNGRGEEA 378
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 271/465 (58%), Gaps = 13/465 (2%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV-CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
++HAH + LHQ L +++ + + + +A +F+ + +PS L+N+M + Y+ +
Sbjct: 6 RLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFRVYAAS 65
Query: 79 GPSEEPVKLFALLKNL-----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
P L ALL + G PD YTF LLKAC + L GQ +H + ++ G
Sbjct: 66 -----PTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLGG 120
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ ++ LY S +MD +VFD M +RD+ ++ + V+ +F EM
Sbjct: 121 HVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCSVEAARKVFDEMP 180
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
ERSVVS++ M+++ + R EAL LF E+ E ++ V++VL CA LGA+D+G+W
Sbjct: 181 ERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVGRW 240
Query: 254 IHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
++S+ S G Y + AL+D + KCG ++ A VF+ K+V W AM+SGLA +
Sbjct: 241 VYSFVCHSKGDYVDS-RIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAMH 299
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G GE +E +E+M+ G+ P++ TFV +L+ C+H+GLV + F M + P +EH
Sbjct: 300 GLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEH 359
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
+GC+VD+LGR+G + +A LI M PNAAIWG+LL++CR + +VE+ E A + LI E
Sbjct: 360 FGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKDE 419
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
PWN Y+ L ++Y E GRWD+ E +++ M+E +K PG SLIE
Sbjct: 420 PWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIE 464
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 262/468 (55%), Gaps = 12/468 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN--QMRNPSVLLFNSMI 72
+ QIH H LR L QS IL + L YA ++ Q RNP L+ ++I
Sbjct: 64 QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP--FLWTAVI 121
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ Y++ G +E + ++ ++ I P +TF+ LLKAC + DL +G+ H + R
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR--LR 179
Query: 133 RFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +G ++++Y C +D KVFDEM RDVI +I + + G+++ LF
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+ + +V+W M++ ++ + EAL F M DE TV + CA+LGA
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 251 GQWIHSYAESSGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
A+ SG V +G+AL+D Y KCG ++ A NVF + KNV ++++MI GL
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 310 AFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A +GR + + L+ M+ + + PN TFVG L C+H+GLV++ R++F SM + P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+HY CMVD+LGR+G ++EA +LI++MS+ P+ +WG+LL +CR H + E+AE A + L
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LEP GNY+LLSN+YA G W +R ++E +KK+P S +
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 265/476 (55%), Gaps = 35/476 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMR 61
+L L + L QI A ++ L IL ++ C T + YA ++F +
Sbjct: 29 LLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIP 88
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P ++LFNSM + YS + + + LF N + PD+YTF LLKAC+ + G+
Sbjct: 89 QPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQ 148
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H I+ G + ++ +Y C +D +VFD
Sbjct: 149 LHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFD---------------------- 186
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
E+ E VVS+N +I+ +S R +EAL LF +++ + + ++ TV++VL
Sbjct: 187 ---------EILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSS 237
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA+D+G+WIH Y + +GL K V V AL+D Y KCG LD A +VF+ + ++ +
Sbjct: 238 CALLGALDLGKWIHEYVKKNGL-DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQA 296
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W+AMI A +G+G+ + ++E+M V P++ TF+G+L C+H GLV++ F SM+
Sbjct: 297 WSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMS 356
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ I+P ++HYGCMVD+LGR+G + EAY I + I+P +W +LLSSC +HG++ELA
Sbjct: 357 EVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELA 416
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + +++ L+ + G+YV+LSN+ A G+W+D +TLR M K PG S IE
Sbjct: 417 KQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIE 472
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 258/464 (55%), Gaps = 6/464 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + I V + + A K+F+ M +++ +NS+I Y NG
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG 227
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIR 138
P +E + LF + G PDE T A ++ AC G+ R G+ VH +++S F +
Sbjct: 228 PVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V++Y CG+ + VFD M+ R V+ MI G+ K +V +F +M E++VV
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVV 347
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN++I++ + + EALRLF ++ ++ T VL CA L + +GQ H +
Sbjct: 348 AWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHV 407
Query: 259 ESSGLY-----RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
G V VGN+LVD Y K G + VF+ + ++ VSWNAMI G A NG
Sbjct: 408 LKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNG 467
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
R + + L+E+M+ P+ T +GVL+ C H+GLV++ R F SMT H I+P +HY
Sbjct: 468 RAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHY 527
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
CM+D+LGR+G ++E +LI +M + P+A +W SLL +CR H ++++ E A +L L+P
Sbjct: 528 TCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDP 587
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NSG YVLLSN+YAE G+W D +R M+ V K PG S IE
Sbjct: 588 DNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIE 631
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 11/325 (3%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ Y G + D +VFD M HR+ N ++ + G D L LF + + S+
Sbjct: 56 LLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSY 115
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N ++++L + GR +ALR M F L+ + + L CA A G+ +H+
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALVTK 175
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
S + V +G ALVD Y KC + A+ VF +P +N+VSWN++I+ NG + +
Sbjct: 176 SS-HGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALA 234
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ +M+ G P++ T V++ CA + R++ M ++ +VD+
Sbjct: 235 LFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMY 294
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGN 438
+ G EA + M+IR + S+++ +V A+ +++ N+ WN
Sbjct: 295 AKCGRTWEAKCVFDRMAIR-SVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWN--- 350
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMR 463
+L YA ++ E LR+++R
Sbjct: 351 --VLIATYAHNS--EEEEALRLFVR 371
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 179/432 (41%), Gaps = 78/432 (18%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H++ +S C L A +F + +P +N+++ A + +G + ++ A
Sbjct: 78 HRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAA 137
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ + Y+FA L AC R G+ VH + +S I +V++Y C +
Sbjct: 138 MHADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCER 197
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
++ KVFD M R+++ N +I + + G VD
Sbjct: 198 PEEAQKVFDAMPERNIVSWNSLITCYEQNGPVD--------------------------- 230
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
EAL LF M F DE T+ +V+ CA L A G+ +H+ S +R+ + +
Sbjct: 231 ----EALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVL 286
Query: 271 GNALVDFYCKCG-------ILD------------------------TARNVFKEIPRKNV 299
NALVD Y KCG + D A+ VF ++ KNV
Sbjct: 287 NNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNV 346
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG---LVEKA--- 353
V+WN +I+ A N E + L+ ++ + V P T+ VL CA+ L ++A
Sbjct: 347 VAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVH 406
Query: 354 --RELFASMTGLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+E F +G S V N +VD+ ++G + + + M+ R N + W +++
Sbjct: 407 VLKEGFRFDSGPESDVFVGN-----SLVDMYLKTGSISDGAKVFERMAARDNVS-WNAMI 460
Query: 410 SSCRTHGHVELA 421
+G + A
Sbjct: 461 VGYAQNGRAKDA 472
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 276/478 (57%), Gaps = 3/478 (0%)
Query: 2 ERKILRLLHGRNTRTH-LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQ 59
++ L +L + T L +IHAH ++ L + + ++ C + + +I YA +F
Sbjct: 24 DQPCLTMLQTQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTT 83
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ +P++ +N++I+ +S + + LF + + P T+ + KA +G G
Sbjct: 84 IPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDG 143
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+HG +++ G E+ I+ ++ +Y + G + + +VFDE+ DV+ N MI G K
Sbjct: 144 AQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKC 203
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G+VDK LF M R+ V+WN MIS ++ R EAL LF +M+ + E E T+V++L
Sbjct: 204 GEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLL 263
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LGA+ G+W+H Y + G + V V A++D YCKCG++ A VF+ P + +
Sbjct: 264 SACAHLGALKHGEWVHDYVKR-GHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGL 322
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
WN++I GLA NG +E + ++ A + P+ +F+GVLT C + G V KAR+ F+
Sbjct: 323 SCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSL 382
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P+++HY CMV+VLG++ + EA LI+ M ++ + IWGSLLSSCR HG+VE
Sbjct: 383 MMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVE 442
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A+ A + + L P ++ Y+L+SN+ A ++++A R+ MRE +K PG S IE
Sbjct: 443 IAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIE 500
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 278/475 (58%), Gaps = 5/475 (1%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
++ +L LL N + + QIH + L + + V ++ A ++F +M
Sbjct: 66 KQTLLYLLQAVNFISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMP 125
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P ++ FN MI Y+ G E ++LF + LG+ PDE+T LL +C +G+++ G+
Sbjct: 126 SPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKA 185
Query: 122 VHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG + R ++ +G ++++Y C +++ ++ F + +D++ N+++ G K
Sbjct: 186 VHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKV 245
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G++++ F +M R +VSWN +++ G + L +M + D T+++++
Sbjct: 246 GELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLV 305
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
GA+D G+W H + + +G+AL+D YCKCG ++ A VFKEI +K+V
Sbjct: 306 SAATESGALDQGRWAHGWVIRMQIKLDAF-LGSALIDMYCKCGSIERASRVFKEINKKDV 364
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
W MI+GLAF+G G +EL+ +M + VSP+ TFV VL+ C+H+GLV++ ++F+S
Sbjct: 365 TVWTTMITGLAFHGYGSKALELFSEM-QEDVSPDDVTFVSVLSACSHSGLVDQGIKVFSS 423
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
MT + I P +EHYGC+VD+L RSG + EA D+I M ++P+ +IWG++L++C+ G VE
Sbjct: 424 MTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVE 482
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
LAE A +EL+NL+P G Y LLSNIYA GRW ++ +R M VKK+ G S
Sbjct: 483 LAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCS 537
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 51/397 (12%)
Query: 40 FVSVCGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
+ S + + A +FN NP++ ++N++I A+S + E L+ +L + G P
Sbjct: 6 YFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAFS-SLKKIESFYLYNVLLSSGECP 64
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D+ T LL+A + ++ +H + I +G FG ++ ++++Y G + +VF
Sbjct: 65 DKQTLLYLLQAVNFISQVKQ---IHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVF 121
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
++M D++ N+MI G+ KKG GL EA+R
Sbjct: 122 EKMPSPDIVSFNVMIVGYAKKG---FGL----------------------------EAMR 150
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS----VGNAL 274
LFHEM E DE T++ +L C +LG V G+ +H + E + +S +GNAL
Sbjct: 151 LFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERR---KPTISSNLILGNAL 207
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
+D Y KC ++ A F + K++VSWN +++G A G E + QM + +
Sbjct: 208 LDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDI---- 263
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV---REAYD 391
++ ++T A G +EL M + ++P+ +V SG + R A+
Sbjct: 264 VSWNSLVTGYACRGDFASVKELIVDMV-MEKVIPDTVTMISLVSAATESGALDQGRWAHG 322
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ M I+ +A + +L+ G +E A KE+
Sbjct: 323 WVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEI 359
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 273/485 (56%), Gaps = 48/485 (9%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHF-----VSVCGTLNEIKYATKI 56
E +++ + + HL Q+HAH ++ L Q+ ++ VS CG+++ YA ++
Sbjct: 51 EERVMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMD---YALRV 107
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGV 113
F ++ NP L+N+MI+ G + +P K F K + G D +T++ L+K C +
Sbjct: 108 FGKIENPDGFLWNTMIRGL---GRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQL 164
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
G +G+ +H +++ G E V VRN ++
Sbjct: 165 GSDLLGKQIHCNVLKHGLEE-------------------------------HVFVRNTLV 193
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
H + D++ +LF EM + +V+WN +I GR EA+ LF M + D+A
Sbjct: 194 HMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDA 253
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T V L CA LG +DIG+ +HS + +GL VVSV N+L+D Y KCG+++ A +F +
Sbjct: 254 TFVVTLSACAALGELDIGRRVHSCIDHTGL-GNVVSVSNSLIDMYAKCGVVEAAYEIFNK 312
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEK 352
+ +N+VSWN MI GLA +G G+ +EL+ +M+ K +PN+ TF+GVL C+H G+VE+
Sbjct: 313 MKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEE 372
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R F M ++I P ++HYG MVD+LGR+G V EAY LI+SM I N+ +W +LL++C
Sbjct: 373 GRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAAC 432
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SP 471
R HG++ELAE + L+ LEP +S +YVLL+N+YA G+W+ +R M V+K P
Sbjct: 433 RVHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKP 492
Query: 472 GQSLI 476
G S I
Sbjct: 493 GNSYI 497
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 194/549 (35%), Positives = 272/549 (49%), Gaps = 75/549 (13%)
Query: 2 ERKILRLLHGRNTRT-HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--------IKY 52
ER L +L R L QIHA LRH LH + +L FV+ C +L I +
Sbjct: 16 ERTCLHILQCRTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINH 75
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKAC 110
A + FN L NSMI A+ +P LF L+ PD YTF L+K C
Sbjct: 76 ARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQAPPFTPDGYTFTALVKGC 135
Query: 111 LGVGDLRVGQCVHGEIIRSG--------------FERFG------------SIR-----I 139
G +HG ++++G + +FG S+R
Sbjct: 136 ATRVATGEGTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWT 195
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+ Y CG M + ++FDEM RD++ N MI G+ K G V LF EMRER+VVS
Sbjct: 196 AVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVS 255
Query: 200 WNLMISSLGKSG-------------------------------RDSEALRLFHEMRDQAF 228
W M+S +G R +AL LF EM+ +
Sbjct: 256 WTSMVSGYCGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASV 315
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E +E TVV VLP A LGA+D+G+WIH +A L R +G AL+D Y KCG + A+
Sbjct: 316 EPNEVTVVCVLPAVADLGALDLGRWIHRFALRKKLDRS-ARIGTALIDMYAKCGEITKAK 374
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
F+ + + SWNA+I+G A NG + +E++ +MI +G PN+ T +GVL+ C H G
Sbjct: 375 LAFEGMTERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCG 434
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVE+ R F +M I P +EHYGCMVD+LGR+GC+ EA +LI++M N I S
Sbjct: 435 LVEEGRRWFNAMERF-GIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSF 493
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L +C V AE +KE++ ++ +GNYV+L N+YA RW D E ++ M++
Sbjct: 494 LFACGYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTS 553
Query: 469 KSPGQSLIE 477
K S+IE
Sbjct: 554 KEVACSVIE 562
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 256/466 (54%), Gaps = 38/466 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E A IF++ +V+ FN MI++Y N E + +F ++ + PD YTF +LK
Sbjct: 86 ETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLK 145
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G+ +LRVG VH I++ G + I +V +Y CG + + KV D+M +RDV+
Sbjct: 146 ACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVS 205
Query: 169 RNLMIHGFCKKGDVDKGLY-------------------------------------LFRE 191
N M+ G+ + G D L +F
Sbjct: 206 WNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFER 265
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M +++++SWN+MI+ + +EA+ LF +M + + D T+ ++LP C L A+ +G
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +H Y E L R + + NAL+D Y KCG L+ AR+VF ++ ++VVSW +M+S
Sbjct: 326 RRLHKYIEKGNL-RPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR 384
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G+G V L+ +M+ G +P+ FV VL+ C+H GL+++ R F MT + IVP +E
Sbjct: 385 SGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIE 444
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
H+ CMVD+ GR+G V EAY I+ M + PN +WG+LLS+CR H +++ A L L
Sbjct: 445 HFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P SG YVLLSNIYA+ G W D +R M++ +KK PG S +E
Sbjct: 505 APKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVE 550
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 33/364 (9%)
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDD---GMKVFDEMSHRDVIVRNL---------MI 173
I+ S RF +++ V +C + D G+K +++ + VI +L ++
Sbjct: 20 IVSSTRIRFDRLKVEVFS-KEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLM 78
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+ +G+ Y+F E++VV +N+MI S + EAL +F M AF D
Sbjct: 79 RAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHY 138
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T VL C+ L + +G +H GL + +GNALV Y KCG L AR V +
Sbjct: 139 TFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLF-IGNALVAMYGKCGCLREARKVLDQ 197
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL--VE 351
+P ++VVSWN+M++G A +G+ + +E+ ++M + ++ + T + + L V+
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQ 257
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSL 408
+F MT NL + M+ + + EA L M ++P+A SL
Sbjct: 258 YIHNMFERMTK-----KNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 409 LSSCRTHGHVELAE--HAVKELINLEPWNSGNYVL---LSNIYAEGGRWDDAETLRMWMR 463
L +C + L H E NL P N +L L ++YA+ G ++A + MR
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLRP----NLLLENALLDMYAKCGCLEEARDVFDKMR 368
Query: 464 ENNV 467
+V
Sbjct: 369 LRDV 372
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 153/348 (43%), Gaps = 45/348 (12%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
N R L Q+H ++ L + I V++ G ++ A K+ +QM V+ +NSM+
Sbjct: 152 NLRVGL-QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
Y+ +G ++ +++ + +L + D T A L + L Q +H R +
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNMFERMTKK 269
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-----RDVIVRNLM--------------I 173
S + ++ +Y + ++ + +F +M V + +L+ +
Sbjct: 270 NLISWNV-MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328
Query: 174 HGFCKKGDVDKGLYL--------------------FREMRERSVVSWNLMISSLGKSGRD 213
H + +KG++ L L F +MR R VVSW M+S+ G+SG+
Sbjct: 329 HKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQG 388
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGN 272
+A+ LF +M D D V+VL C+ G +D G+ + E G+ ++
Sbjct: 389 YDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA- 447
Query: 273 ALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGV 319
+VD + + G ++ A + K++P N W A++S + + ++G+
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 2/361 (0%)
Query: 118 VGQCVHGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+G +H ++R+G + + +V+LY +C + D VF EM+ RDV+ N+MI G+
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K GD+ LF M ER+VVSW +I + R EA+ +F M+ + E D ++
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+VL C LGAVD+G+W+H + GL R+ + + N+++D Y KCG ++ A VF+ +
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVRRGL-RQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEE 274
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+VV+W +I+G A +G G VE++ +M + ++PN TF+ +L+ C+H GL + R
Sbjct: 275 KSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWY 334
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + I P +EHYGCMVD+LGR+GC++EA DL++ M ++ NAAIWG+LL++ RTHG
Sbjct: 335 FNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHG 394
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+L E A+ LI LEP NSGNY+LLSNI+AE RWDD LR M+E ++ PG S I
Sbjct: 395 DADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSI 454
Query: 477 E 477
E
Sbjct: 455 E 455
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 36/294 (12%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N+++A +V ++ +A ++F+ M +V+ + ++I Y+ EE V++F ++
Sbjct: 149 NVMIAGYVKA----GDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQV 204
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
GI PD +L AC +G + +G+ VH ++R G + + ++++Y CG ++
Sbjct: 205 EGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEK 264
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++VF+ M + V+ +I GF G GL
Sbjct: 265 AVEVFEGMEEKSVVTWTTLIAGFALHG---LGL--------------------------- 294
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+A+ +F M + ++ T +A+L C+ +G D+G+W + S + V
Sbjct: 295 -QAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGC 353
Query: 274 LVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
+VD + G L A+++ K++P K N W A+++ +G +LG E +I
Sbjct: 354 MVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLI 407
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 10/171 (5%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +R L Q ++ + + I+ A ++F M SV+ + ++I ++L+G
Sbjct: 233 VHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 292
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ-----CVHGEIIRSGFERFG 135
+ V++F ++ + P++ TF +L AC VG +G+ V I+ E +G
Sbjct: 293 GLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYG 352
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKG 185
+ V+L G + + + +M + + + ++ GD D G
Sbjct: 353 CM----VDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLG 399
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 272/475 (57%), Gaps = 15/475 (3%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+ ++ LL + IHA +R Q ++ + VC TL+ I YA +F + N
Sbjct: 30 KTLISLLRNCKNNAQVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSIDYAYDVFRYVSN 89
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V L+ +MI + +G S + V L+ + + + PD Y +LKAC G+ + R +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHSSVLPDNYVITSVLKAC-GLDECRE---I 145
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++++ GF S+ + ++E+Y G++ D KVFDEM RD +V +MI+ + + G +
Sbjct: 146 HSQVLKLGFGSSRSVGLKLMEIYGKSGELADAKKVFDEMPDRDQVVATVMINCYSECGCI 205
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ L LF++++ + V W MI L ++ ++AL LF EM+ F L I
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNREMNKALELFREMQLSVFYLPAR-------IW 258
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
R + G +HS+ E+ + VGNAL++ Y +CG ++ A+ VFK + K+V+S+
Sbjct: 259 VRWSS---GAGVHSFVENQKMELSNF-VGNALINMYSRCGDINVAKRVFKGMRDKDVISY 314
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MISGLA +G + ++ M+ +G PN+ T V +L C+H GL++ E+F SM
Sbjct: 315 NTMISGLAMHGASVEAINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWR 374
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ S+ P +EHYGC+VD+LGR G + EAY I +M I P+ + G+LLS+C+ HG++EL E
Sbjct: 375 VFSVEPQIEHYGCIVDLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMELGE 434
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L E +SG YVLLS+IYA G+W ++ +R MRE+ ++K PG S IE
Sbjct: 435 KIAKRLFESENPDSGTYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIE 489
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 263/468 (56%), Gaps = 37/468 (7%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVS---VCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+T L QIHAH +R L Q + F+S + G L + Y+ + F Q+ +P V +N+M
Sbjct: 16 KTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTM 75
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I+A S++ ++ + L+ ++ GI D + + +K+C+ L G VH I + G
Sbjct: 76 IRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGH 135
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ + V++LY+ C + D KVFDEM H
Sbjct: 136 QWDTLLLTAVMDLYSLCQRGGDACKVFDEMPH---------------------------- 167
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF--ELDEATVVAVLPICARLGAVD 249
R V+WN+MIS ++ R +AL LF M+ ++ E D+ T + +L CA L A++
Sbjct: 168 ---RDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALE 224
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ IH Y G YR +++ N+L+ Y +CG LD A VFK + KNVVSW+AMISGL
Sbjct: 225 FGERIHGYIMERG-YRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGL 283
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A NG G +E +E+M+ GV P+ TF GVL+ C+++G+V++ F M+ + PN
Sbjct: 284 AMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPN 343
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ HYGCMVD+LGR+G + +AY LI SM ++P++ +W +LL +CR HGHV L E + LI
Sbjct: 344 VHHYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLI 403
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ +G+YVLL NIY+ G W+ +R M+ +++ +PG S IE
Sbjct: 404 ELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIE 451
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 281/475 (59%), Gaps = 39/475 (8%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLNE---IKYATKIFNQMRNP-S 64
+G ++ T L QIHA +RH + S+ L H + +L + YA K+F+++ P +
Sbjct: 25 YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V ++N++I+ Y+ G S L+ ++ G + PD +T+ L+KA + D+R+G+ +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+IRSGF GS+ + V+N ++H + GDV
Sbjct: 145 SVVIRSGF---GSL----------------------------IYVQNSLLHLYANCGDVA 173
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+F +M E+ +V+WN +I+ ++G+ EAL L+ EM + + D T+V++L CA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
++GA+ +G+ +H Y GL R + S N L+D Y +CG ++ A+ +F E+ KN VSW
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 304 AMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
++I GLA NG G+ +EL++ M + +G+ P + TFVG+L C+H G+V++ E F M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EH+GCMVD+L R+G V++AY+ I+SM ++PN IW +LL +C HG +LAE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +++ LEP +SG+YVLLSN+YA RW D + +R M + VKK PG SL+E
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 272/528 (51%), Gaps = 67/528 (12%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ Q+HA +R LH+ I +S + A ++FNQ++ P+V L NS+I+A+
Sbjct: 33 NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ N + +F+ ++ G++ D +T+ LLKAC G L V + +H I + G
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 136 SIRIGVVELYTSCG---------------------------------QMDDGMKVFDEMS 162
+ +++ Y+ CG ++ D ++FDEM
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP 212
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--------- 213
RD+I N M+ G+ + ++ K LF +M ER+ VSW+ M+ K+G
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272
Query: 214 ------------------------SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
EA RL +M + D A V+++L C G +
Sbjct: 273 MPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G IHS + S L V NAL+D Y KCG L A +VF +IP+K++VSWN M+ GL
Sbjct: 333 LGMRIHSILKRSNLGSNAY-VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGL 391
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+G G+ +EL+ +M +G+ P+K TF+ VL C HAGL+++ + F SM ++ +VP
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+LGR G ++EA ++++M + PN IWG+LL +CR H V++A+ + L+
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLV 511
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P + GNY LLSNIYA W+ +R M+ V+K G S +E
Sbjct: 512 KLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 268/460 (58%), Gaps = 9/460 (1%)
Query: 23 AHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
AH LR L ++ HF+S+ G + + A ++F++ ++ +N++I Y G
Sbjct: 149 AHVLRLGLDSDVFVVNAATHFLSIRGPMED---ARRLFDRSPVRDLVSWNTLIGGYVRRG 205
Query: 80 PSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
E ++LF + ++ + PDE T + C + DL +G+ +HG + G +
Sbjct: 206 NPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRL 265
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++ VF+ + HR V+ MI GF K G +D +F EM ER V
Sbjct: 266 MNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDV 325
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
WN +++ + + EAL LFHEM++ + DE T+V +L C++LGA+++G W+H Y
Sbjct: 326 FPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRY 385
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
E L V ++G +L+D Y KCG ++ A ++FKEIP KN ++W AMI GLA +G
Sbjct: 386 IEKHRLVFSV-ALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANE 444
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+E + MI G P++ TF+GVL+ C HAGLV++ RE F+ M + + ++HY CM+
Sbjct: 445 AIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMI 504
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + EA L+ +M + P+A +WG++ +CR G++ L E A +L+ ++P +SG
Sbjct: 505 DLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSG 564
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL+N+YAE A+ +R MR V+K PG S IE
Sbjct: 565 IYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIE 604
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 174/404 (43%), Gaps = 72/404 (17%)
Query: 68 FNSMIKAYSLN--------GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+N+ I+A SL+ G + L+ ALL++ PD TF LLKAC + +
Sbjct: 84 YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGY 143
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G ++R G + + + G M+D ++FD RD++ N +I G+ +
Sbjct: 144 GDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVR 203
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+G+ + L LF W ++ D DE T++A
Sbjct: 204 RGNPAEALELF----------WRMVA-------------------EDAVVRPDEVTMIAA 234
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC----------------- 281
+ C ++ +++G+ +H + +S G+ V + NAL+D Y KC
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGV-SCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRT 293
Query: 282 --------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G++D AR VF E+P ++V WNA+++G + + + L+ +M
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
V P++ T V +LT C+ G +E + + H +V ++ ++D+ + G +
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEK-HRLVFSVALGTSLIDMYAKCGNIE 412
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+A + + + + NA W +++ HGH A + +I L
Sbjct: 413 KAIHIFKEIPEK-NALTWTAMICGLANHGHANEAIEHFRTMIEL 455
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 2/167 (1%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + +H+L S + + + I+ A IF ++ + L + +MI + +G
Sbjct: 382 VHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGH 441
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-IRSGFERFGSIRI 139
+ E ++ F + LG PDE TF +L AC G ++ G+ + + ER
Sbjct: 442 ANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYS 501
Query: 140 GVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCKKGDVDKG 185
+++L G +D+ ++ + M D +V + +G++ G
Sbjct: 502 CMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLG 548
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 277/475 (58%), Gaps = 20/475 (4%)
Query: 21 IHAHFLRHK-LHQSN--LILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAY 75
IH H L+ LH + + + C N YA +F+ ++ P + ++N MI++Y
Sbjct: 38 IHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKYPELRVYNIMIRSY 97
Query: 76 S-LNGPSE-----EPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCVHGEII 127
+ G + + + L+ + N GI P+ TF L+K C L G VG+ +H ++
Sbjct: 98 GCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSRLQYGG-TVGEVIHAHVL 156
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ GF + ++ L+ + G + KVFDEM RDV+ N M+ G+ + G+V+ L
Sbjct: 157 KFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALN 216
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR----DQAFELDEATVVAVLPICA 243
LFR+M R++++WN +I+ L ++G E+L +FHEM+ D + D+ T+ +VL CA
Sbjct: 217 LFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACA 276
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LG++D G+W+H+Y + + VV +G ALV+ Y KCG + A +F ++P K+ +W
Sbjct: 277 LLGSIDHGKWVHAYLRKNDIECDVV-IGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWT 335
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMIS A +G G+ + + +M GV PN TFVG+L+ C+H+GLVE+ R F M +
Sbjct: 336 AMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRV 395
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+SI P + HY CMVD+L R+ EA LIRSM ++P+ +WG+LL C+ HG+++L E
Sbjct: 396 YSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEK 455
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK-KSPGQSLIE 477
LI+LEP N Y+ L +IY + G++D A+ +R M+E ++ K PG S+IE
Sbjct: 456 VAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIE 510
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H +HA+ ++ + +I V++ G +++ A +IFN M + +MI ++
Sbjct: 283 HGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFA 342
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
L+G ++ F ++ G+ P+ TF LL AC G + G+C
Sbjct: 343 LHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRC 387
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/478 (35%), Positives = 273/478 (57%), Gaps = 39/478 (8%)
Query: 35 LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
LI + +SV G L KYA K+F+++ P V + N +++ + + E+ V L+ ++
Sbjct: 16 LIYSASLSVPGAL---KYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKR 72
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC------ 148
G+ PD YTF +LKAC + G HG+++R GF ++ ++ + +C
Sbjct: 73 GVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIA 132
Query: 149 -------------------------GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G++D+ M++FDEM ++D + N+MI G K ++D
Sbjct: 133 SELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMD 192
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF E+ VV+WN MIS G EAL +F EMRD D T++++L CA
Sbjct: 193 SARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACA 252
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEIPRKNV 299
LG ++ G+ +H Y + + VG NAL+D Y KCG +D A VF+ + +++
Sbjct: 253 VLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 312
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+WN +I GLA + E +E++E+M V PN+ TF+GV+ C+H+G V++ R+ F+
Sbjct: 313 STWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 371
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M +++I PN++HYGCMVD+LGR+G + EA+ + SM I PNA +W +LL +C+ +G+VE
Sbjct: 372 MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVE 431
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L ++A ++L+++ SG+YVLLSNIYA G+WD + +R + VKK G SLIE
Sbjct: 432 LGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 489
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 260/442 (58%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H CG L+ A K+F ++ V+ +NSMI + G ++ ++LF +++ +
Sbjct: 172 LIHCYFSCGDLDS---ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
T +L AC + +L G+ V I + ++ ++++YT CG ++D +
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD M +D + M+ G+ D + + M ++ +V+WN +IS+ ++G+ +EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 217 LRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L +FHE++ Q +L++ T+V+ L CA++GA+++G+WIHSY + G+ R V +AL+
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI-RMNFHVTSALI 407
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y KCG L+ +R VF + +++V W+AMI GLA +G G V+++ +M V PN
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF V C+H GLV++A LF M + IVP +HY C+VDVLGRSG + +A I +
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I P+ ++WG+LL +C+ H ++ LAE A L+ LEP N G +VLLSNIYA+ G+W++
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR MR +KK PG S IE
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIE 609
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 223/491 (45%), Gaps = 82/491 (16%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
L Q H H +R + ++ + ++YA K+F+++ P+ +N++I+A
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104
Query: 75 YSLNGPSEEPV-KLFALLKNLG---IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
Y+ +GP +PV ++A L + +P++YTF L+KA V L +GQ +HG ++S
Sbjct: 105 YA-SGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ ++ Y SCG +D KVF + +DV+ N MI+GF +KG DK L LF+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M +SE ++ H T+V VL CA++ ++
Sbjct: 222 KM--------------------ESEDVKASH-----------VTMVGVLSACAKIRNLEF 250
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL-------------------------- 284
G+ + SY E + + +++ NA++D Y KCG +
Sbjct: 251 GRQVCSYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 285 -----DTARNVFKEIPRKNVVSWNAMISGLAFNGR-GELGVELYEQMIAKGVSPNKATFV 338
+ AR V +P+K++V+WNA+IS NG+ E + +E + K + N+ T V
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
L+ CA G +E R + S H I N ++ + + G + ++ ++ S+
Sbjct: 370 STLSACAQVGALELGRWIH-SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN-SGNYVLLSNIY---AEGGRWDD 454
R + +W +++ HG AV ++ N N V +N++ + G D+
Sbjct: 429 R-DVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 455 AETLRMWMREN 465
AE+L M N
Sbjct: 485 AESLFHQMESN 495
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 253/453 (55%), Gaps = 14/453 (3%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLF 88
S LI AH + + + A + +MR+ P+V+ +N ++ + +G + + V
Sbjct: 90 SALIAAH-----ASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLAL 144
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
+ G PD + L A VGD+ VG+ +HG ++++G + ++++Y C
Sbjct: 145 VRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKC 204
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNLMI 204
G+ D+ ++VFDE SH DV N ++ G + V + L LFRE R +VVSW ++
Sbjct: 205 GRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIV 264
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
+ ++GRD EA+ LF EM+ + E + T+ VLP A + A+ G+ H ++ G +
Sbjct: 265 ACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFH 324
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ VG+ALVD Y KCG + AR +F+ +P +NVVSWNAMI G A +G E V L+
Sbjct: 325 HDIY-VGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRS 383
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M + P+ TF VL C+ AG E+ R F M H I P +EHY CMV +LGR+G
Sbjct: 384 MQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAG 443
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
+ +AYD+I M P+ IWGSLL SCR HG+V LAE A + L LEP N+GNYVLLSN
Sbjct: 444 KLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSN 503
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA WD LR M+ +KK G S IE
Sbjct: 504 IYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIE 536
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 152/371 (40%), Gaps = 45/371 (12%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
L+++ PD LK+C LR+ + +H +G R + ++ Y G
Sbjct: 13 FLRHVSFPPDPRLLPSALKSC---SALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFG 69
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMIS 205
D V D M HR V+ + +I GD + L MR E +V++WN ++S
Sbjct: 70 ATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVS 129
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
L +SGR +A+ M + F D V L +G V +G+ +H Y +G R
Sbjct: 130 GLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGC-R 188
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V AL+D Y KCG D VF E +V S NA+++GL+ N + + L+ +
Sbjct: 189 LDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREF 248
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC---------- 375
+ +G+ N ++ ++ CC G +A +LF M I PN C
Sbjct: 249 VGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQS-EGIEPNSVTIPCVLPAFANIAA 307
Query: 376 -------------------------MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+VD+ + G VR+A + +M R N W +++
Sbjct: 308 LMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYR-NVVSWNAMIG 366
Query: 411 SCRTHGHVELA 421
HG E A
Sbjct: 367 GYAMHGEAENA 377
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L+HGR+ H LR H + + V + ++ A IF M +
Sbjct: 305 IAALMHGRSA-------HCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRN 357
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ +N+MI Y+++G +E V+LF +++ PD TF +L AC G G+
Sbjct: 358 VVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFN 417
Query: 125 EI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E+ I E + + V L G++DD + ++M
Sbjct: 418 EMQHKHGISPRMEHYACM----VTLLGRAGKLDDAYDIINQM 455
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 271/461 (58%), Gaps = 8/461 (1%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H+ ++ + H +H +++ H + CG +++ A K+F++ ++ +N +I Y
Sbjct: 181 HVLKLRLELVSH-VHNASI---HMFASCG---DMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G +E+ + ++ L+++ G+ PD+ T L+ +C +GDL G+ + + +G
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++++ CG + + ++FD + R ++ MI G+ + G +D LF +M E+
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VV WN MI ++ R +AL LF EM+ + DE T++ L C++LGA+D+G WIH
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y E L V++G +LVD Y KCG + A +VF I +N +++ A+I GLA +G
Sbjct: 414 YIEKYSLSLN-VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ + +MI G++P++ TF+G+L+ C H G+++ R+ F+ M ++ P L+HY M
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EA L+ SM + +AA+WG+LL CR HG+VEL E A K+L+ L+P +S
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G YVLL +Y E W+DA+ R M E V+K PG S IE
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 205/443 (46%), Gaps = 24/443 (5%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIF 57
+ +L LL HL QI A + + L + ++ C L+E + Y+ KI
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA-LSESRYLDYSVKIL 110
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKACL 111
+ NP++ +N I+ +S SE P + F L K + PD +T+ L K C
Sbjct: 111 KGIENPNIFSWNVTIRGFS---ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+ +G + G +++ E + + ++ SCG M++ KVFDE RD++ N
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+I+G+ K G+ +K +Y+++ M V V+ ++SS G + + +++
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ V A++ + ++ G + + I E R +VS ++ Y +CG+LD +
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK----RTIVS-WTTMISGYARCGLLDVS 342
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
R +F ++ K+VV WNAMI G RG+ + L+++M P++ T + L+ C+
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G ++ + + +S+ N+ +VD+ + G + EA + + R N+ + +
Sbjct: 403 GALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTA 460
Query: 408 LLSSCRTHGHVELAEHAVKELIN 430
++ HG A E+I+
Sbjct: 461 IIGGLALHGDASTAISYFNEMID 483
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 269/462 (58%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
++H H ++ L SNL L S+CG ++ A +F++ V +N MI Y
Sbjct: 156 KLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMD---MARGVFDRRCKEDVFSWNLMISGY 211
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ EE ++L ++ + P T +L AC V D + + VH + E
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V Y +CG+MD +++F M RDVI ++ G+ ++G++ F +M R
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+SW +MI ++G +E+L +F EM+ DE T+V+VL CA LG+++IG+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+Y + + + VV VGNAL+D Y KCG + A+ VF ++ +++ +W AM+ GLA NG+G
Sbjct: 392 TYIDKNKIKNDVV-VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ ++++ QM + P+ T++GVL+ C H+G+V++AR+ FA M H I P+L HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G V+EAY+++R M + PN+ +WG+LL + R H +AE A K+++ LEP N
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y LL NIYA RW D +R + + +KK+PG SLIE
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 27/431 (6%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAH-FVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSM 71
T Q+H+ + + + FV C L + YA K+F ++ P V+++N+M
Sbjct: 46 TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNM 105
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL-GVGDLRVGQCVHGEIIRSG 130
IK +S E V+L+ + G+ PD +TF LL G L G+ +H +++ G
Sbjct: 106 IKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFG 165
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
++ +V++Y+ CG MD VFD DV NLMI G+ + + ++ + L
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 191 EMRERSVVSWN----LMISSLGKSGRDSEALRLFHEM-----RDQAFELDEATVVAVLPI 241
EM ER++VS L++ S +D + + HE + + L+ A V A
Sbjct: 226 EM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY--- 281
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
A G +DI I ++ R V+S ++V Y + G L AR F ++P ++ +S
Sbjct: 282 -AACGEMDIAVRIFRSMKA----RDVIS-WTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W MI G G +E++ +M + G+ P++ T V VLT CAH G +E E +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYI 394
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I ++ ++D+ + GC +A + M R + W +++ +G
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQ---G 450
Query: 422 EHAVKELINLE 432
+ A+K ++
Sbjct: 451 QEAIKVFFQMQ 461
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 261/449 (58%), Gaps = 13/449 (2%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L F S CG + A ++F+ M +V+ +N +I Y NGP+ E ++ F + LG
Sbjct: 197 LIDFYSKCGL---VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGF 253
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI---GVVELYTSCGQMDD 153
PDE T A ++ AC + + G +H +++S ++F + I +V++Y CG++++
Sbjct: 254 KPDEVTLASVVSACATLAAFKEGVQIHARVVKS--DKFRNDLILGNALVDMYAKCGRVNE 311
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
VFD M R+ + M+ G+ K V +F ++++ +VSWN +I+ ++G +
Sbjct: 312 ARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGEN 371
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-----V 268
EAL LF ++ ++ T +L A L +++G+ HS+ G + +
Sbjct: 372 EEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDI 431
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VGN+L+D Y KCG ++ VF+ + K+ VSWN MI G A NG G +EL+++M+
Sbjct: 432 FVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLES 491
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
G P+ T +G L C+HAGLVE+ R F SMT H ++P +HY CMVD+LGR+GC+ E
Sbjct: 492 GEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEE 551
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A DLI SM +P+A +W SLLS+C+ H ++ L ++ +++ ++P +SG YVLL+N+Y+E
Sbjct: 552 AKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSE 611
Query: 449 GGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRW DA ++R MR V K PG S I+
Sbjct: 612 LGRWGDAVSVRKLMRRRGVVKQPGCSWID 640
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 10/373 (2%)
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ D FA LL C+ + R + VHG +I++ F I+ ++++Y CG +D
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
KVFD MS R+V N +I + G VD+ +LF M E+ SWN MI+ + R E
Sbjct: 80 KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL F M F L++ + + L C+RL + +G IH S Y V +G+ L+
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSK-YSLDVFMGSGLI 198
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
DFY KCG++ AR VF + KNVVSWN +I+ NG +E + +M G P++
Sbjct: 199 DFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEV 258
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T V++ CA ++ ++ A + +L +VD+ + G V EA +
Sbjct: 259 TLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDR 318
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEH--AVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
M +R NA +++S V+ A A + ++ WN+ L Y + G +
Sbjct: 319 MPVR-NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNA-----LIAGYTQNGENE 372
Query: 454 DAETL-RMWMREN 465
+A L RM RE+
Sbjct: 373 EALGLFRMLKRES 385
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 198/482 (41%), Gaps = 109/482 (22%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
++L R+ R+ +H ++ + I + V G + YA K+F++M +V
Sbjct: 35 VKLRSSRDARS----VHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNV 90
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWP------------------------- 98
FNS+I G +E LF+L+ K+ W
Sbjct: 91 FSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRD 150
Query: 99 ----DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
++Y+F L AC + DL++G +HG I +S + + G+++ Y+ CG +
Sbjct: 151 DFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCA 210
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
+VFD M E++VVSWN +I+ ++G
Sbjct: 211 RRVFDGM-------------------------------EEKNVVSWNCLITCYEQNGPAI 239
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EAL F M + F+ DE T+ +V+ CA L A G IH+ S +R + +GNAL
Sbjct: 240 EALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNAL 299
Query: 275 VDFYCKCGILDTARNVFKEIP-------------------------------RKNVVSWN 303
VD Y KCG ++ AR VF +P +K++VSWN
Sbjct: 300 VDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWN 359
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL------- 356
A+I+G NG E + L+ + + V P TF +L A+ +E R+
Sbjct: 360 ALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKH 419
Query: 357 -FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F +G P++ ++D+ + G V E + +M + + W +++ +
Sbjct: 420 GFRFQSGEE---PDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIGYAQN 475
Query: 416 GH 417
G+
Sbjct: 476 GY 477
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 256/466 (54%), Gaps = 38/466 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E A IF++ +V+ FN MI++Y N E + +F ++ + PD YTF +LK
Sbjct: 86 ETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLK 145
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G+ +LRVG VH I++ G + I +V +Y CG + + KV D+M +RDV+
Sbjct: 146 ACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVS 205
Query: 169 RNLMIHGFCKKGDVDKGLY-------------------------------------LFRE 191
N M+ G+ + G D L +F
Sbjct: 206 WNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFER 265
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M +++++SWN+MI+ + +EA+ LF +M + + D T+ ++LP C L A+ +G
Sbjct: 266 MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLG 325
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +H Y E L ++ + NAL+D Y KCG L+ AR+VF ++ ++VVSW +M+S
Sbjct: 326 RRLHKYIEKGNLQPNLL-LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR 384
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G+G V L+ +M+ G +P+ FV VL+ C+H GL+++ R F MT + IVP +E
Sbjct: 385 SGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIE 444
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
H+ CMVD+ GR+G V EAY I+ M + PN +WG+LLS+CR H +++ A L L
Sbjct: 445 HFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQL 504
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P SG YVLLSNIYA+ G W D +R M++ +KK PG S +E
Sbjct: 505 APKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVE 550
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 156/333 (46%), Gaps = 29/333 (8%)
Query: 154 GMKVFDEMSHRDVIVRNL---------MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
G+K +++ + VI +L ++ + +G+ Y+F E++VV +N+MI
Sbjct: 50 GIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMI 109
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S + EAL +F M AF D T VL C+ L + +G +H GL
Sbjct: 110 RSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLD 169
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ +GNALV Y KCG L AR V ++P ++VVSWN+M++G A +G+ + +E+ ++
Sbjct: 170 TNLF-IGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGL--VEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
M + ++ + T + + L V+ +F MT NL + M+ +
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTK-----KNLISWNVMIAIYVN 283
Query: 383 SGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAE--HAVKELINLEPWNSG 437
+ EA L M ++P+A SLL +C + L H E NL+P
Sbjct: 284 NSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQP---- 339
Query: 438 NYVL---LSNIYAEGGRWDDAETLRMWMRENNV 467
N +L L ++YA+ G ++A + MR +V
Sbjct: 340 NLLLENALLDMYAKCGCLEEARDVFDKMRLRDV 372
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 153/348 (43%), Gaps = 45/348 (12%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
N R L Q+H ++ L + I V++ G ++ A K+ +QM V+ +NSM+
Sbjct: 152 NLRVGL-QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
Y+ +G ++ +++ + +L + D T A L + L Q +H R +
Sbjct: 211 AGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENVQYIHNMFERMTKK 269
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-----RDVIVRNLM--------------I 173
S + ++ +Y + ++ + +F +M V + +L+ +
Sbjct: 270 NLISWNV-MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRL 328
Query: 174 HGFCKKGDVDKGLYL--------------------FREMRERSVVSWNLMISSLGKSGRD 213
H + +KG++ L L F +MR R VVSW M+S+ G+SG+
Sbjct: 329 HKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQG 388
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGN 272
+A+ LF +M D D V+VL C+ G +D G+ + E G+ ++
Sbjct: 389 YDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA- 447
Query: 273 ALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGV 319
+VD + + G ++ A + K++P N W A++S + + ++G+
Sbjct: 448 CMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGL 495
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 269/462 (58%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
++H H ++ L SNL L S+CG ++ A +F++ V +N MI Y
Sbjct: 156 KLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMD---MARGVFDRRCKEDVFSWNLMISGY 211
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ EE ++L ++ + P T +L AC V D + + VH + E
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V Y +CG+MD +++F M RDVI ++ G+ ++G++ F +M R
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+SW +MI ++G +E+L +F EM+ DE T+V+VL CA LG+++IG+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+Y + + + VV VGNAL+D Y KCG + A+ VF ++ +++ +W AM+ GLA NG+G
Sbjct: 392 TYIDKNKIKNDVV-VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ ++++ QM + P+ T++GVL+ C H+G+V++AR+ FA M H I P+L HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G V+EAY+++R M + PN+ +WG+LL + R H +AE A K+++ LEP N
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y LL NIYA RW D +R + + +KK+PG SLIE
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 191/404 (47%), Gaps = 26/404 (6%)
Query: 40 FVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
FV C L + YA K+F ++ P V+++N+MIK +S E V+L+ + G+ P
Sbjct: 73 FVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTP 132
Query: 99 DEYTFAPLLKACL-GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
D +TF LL G L G+ +H +++ G ++ +V++Y+ CG MD V
Sbjct: 133 DSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGV 192
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN----LMISSLGKSGRD 213
FD DV NLMI G+ + + ++ + L EM ER++VS L++ S +D
Sbjct: 193 FDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKD 251
Query: 214 SEALRLFHEM-----RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ + HE + + L+ A V A A G +DI I ++ R V+
Sbjct: 252 KDLCKRVHEYVSECKTEPSLRLENALVNAY----AACGEMDIAVRIFRSMKA----RDVI 303
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
S ++V Y + G L AR F ++P ++ +SW MI G G +E++ +M +
Sbjct: 304 S-WTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA 362
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
G+ P++ T V VLT CAH G +E E + + I ++ ++D+ + GC +
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEK 421
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
A + M R + W +++ +G + A+K ++
Sbjct: 422 AQKVFHDMDQR-DKFTWTAMVVGLANNGQ---GQEAIKVFFQMQ 461
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 265/476 (55%), Gaps = 5/476 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMRNP 63
+ LL T + QIHA + + ++ HFV + + YA +I ++ P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKACLGVGDLRVGQC 121
++ NSMI+A+ + E+ + + + G + PD YT L++AC G+ G
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG IR GF+ ++ G++ LY G +D KVF+ + D + R M+ + GD
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V LF M ER ++WN MIS + G EAL +FH M+ + +++ +++VL
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C +LGA+D G+W HSY E + + + V + LVD Y KCG ++ A VF + KNV +
Sbjct: 250 CTQLGALDQGRWAHSYIERNKI-KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W++ ++GLA NG GE +EL+ M GV+PN TFV VL C+ G V++ + F SM
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
I P LEHYGC+VD+ R+G + +A +I+ M ++P+AA+W SLL + R + ++EL
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A K+++ LE N G YVLLSNIYA+ WD+ +R M+ V+K PG S++E
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVME 484
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 258/463 (55%), Gaps = 6/463 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L +IHA + H LH ++ + C + A K+F+++ NP ++ F S++ +
Sbjct: 30 LQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLMSLHL 89
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
E + LFA + G PD + L A G GD VG+ VHG I R G + G
Sbjct: 90 QLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLD--GE 147
Query: 137 IRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +G ++++Y+ CG+ + +KVFD MS +D + M+HG+ K VD L F ++
Sbjct: 148 VVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKCAGVDSALSFFDQVPV 207
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
RSVV+W +I+ + + AL LF M + T+V VL CA +GA+D+G+ I
Sbjct: 208 RSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLGRVI 267
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H Y ++ V NAL+D Y K G ++ A +VF+E+ K+ +W MIS G
Sbjct: 268 HGYGSKCNASLNII-VSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQGD 326
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G+ +EL++ M+ GV PN TFV VL+ C+H+GL+E+ ELF M L+ I P LEHYG
Sbjct: 327 GKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDPLLEHYG 386
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CM+D+LGR G + EA LI M++ P+ IW SLLS+C G+ LAE A KE++ EP
Sbjct: 387 CMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIAGKEIVKREPG 446
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ G YVLL N+YA +W +A +R M + K PG S IE
Sbjct: 447 DDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIE 489
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/441 (36%), Positives = 265/441 (60%), Gaps = 6/441 (1%)
Query: 39 HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--I 96
HF SV G++ A ++F++ V+ +N++I Y +G E ++LF L G +
Sbjct: 164 HFWSVSGSM---VLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAV 220
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE T + C +GDL +G+ +H + G + V+++Y CG ++
Sbjct: 221 RPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKS 280
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF+ + ++ V+ MI G + G ++ LF EM ER V WN +++ ++ + EA
Sbjct: 281 VFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEA 340
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LFHEM++ + +E T+V +L C++LGA+++G W+H Y + LY V ++G +LVD
Sbjct: 341 IALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSV-ALGTSLVD 399
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + A +FKEIP KN ++W AMI GLA +G + +E +++MI G+ P++ T
Sbjct: 400 MYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEIT 459
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL+ C HAGLV++ R+ F+ M + + ++HY CM+D+LGR+G + EA L+ +M
Sbjct: 460 FIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTM 519
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ P+A +WG+L +CR HG++ L E A +L+ L+P +SG YVLL+N+YAE A+
Sbjct: 520 PMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKAD 579
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R+ MR V+K PG S IE
Sbjct: 580 KVRVMMRHLGVEKVPGCSCIE 600
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 195/436 (44%), Gaps = 72/436 (16%)
Query: 35 LILAHFVSVCGTLNEIKYATKIFNQMRNP--SVLLFNSMIKAYSLNGPSEEPV-----KL 87
L+ A +S + + +A I + +P S +N+ +A SL P V L
Sbjct: 49 LVAAFALSDPASPRPLLHALAILASLPSPPDSASPYNAAFRALSL-CPHRHLVDRHCLPL 107
Query: 88 F-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYT 146
+ ALL + PD TF LLKAC + G V G + + GF + V ++
Sbjct: 108 YRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWS 167
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
G M ++FDE RDV+ N +I G+ + G + L LF W L+
Sbjct: 168 VSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELF----------WRLV--- 214
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
D +A+R DE T++ + CA++G +++G+ +H + +S G+ R
Sbjct: 215 -----EDGKAVR-----------PDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGV-RC 257
Query: 267 VVSVGNALVDFYCKCGILDTARNVFK-------------------------------EIP 295
V + NA++D Y KCG L+ A++VF+ E+P
Sbjct: 258 TVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMP 317
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++V WNA+++G N +G+ + L+ +M V PN+ T V +L+ C+ G +E
Sbjct: 318 ERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMW 377
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ + H + ++ +VD+ + G +++A + + + + NA W +++ H
Sbjct: 378 VHHYIDR-HQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDK-NALTWTAMICGLANH 435
Query: 416 GHVELAEHAVKELINL 431
GH + A + +I+L
Sbjct: 436 GHADEAIEYFQRMIDL 451
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + RH+L+ S + V + IK A IF ++ + + L + +MI + +G
Sbjct: 378 VHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGH 437
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++E ++ F + +LG+ PDE TF +L AC G ++ G+
Sbjct: 438 ADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGR 477
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 248/427 (58%), Gaps = 9/427 (2%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I++A ++F++M V+ +N+MI Y NG E+ +KLF + D T+ ++
Sbjct: 214 IEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPK----RDVITWNTMMAG 269
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
GD+ + ++ + ++ G Y G + + K+F M R+VI
Sbjct: 270 YAQCGDVENAVELFEKMPEQNLVSWNTMIAG----YVQNGSVKEAFKLFQIMPERNVISW 325
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N +I GF + G V++ L LF+ M E +VVSWN MI+ ++G+ AL+LF +M+ +
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMK 385
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+ T VLP CA L ++ G H SG V+ VGN LV Y KCG ++ AR
Sbjct: 386 PNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVL-VGNTLVGMYAKCGSIEDARK 444
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF + +++ S +AMI G A NG + +EL+EQM G+ P++ TFVGVL+ C HAGL
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGL 504
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V++ R+ F MT + I P +EHYGCM+D+LGR+GC EA DLI M I+P+A +WGSLL
Sbjct: 505 VDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S+CRTH +++L E + LI L P N YVLLSNIYA GRWDD ++R M++ VKK
Sbjct: 565 SACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKK 624
Query: 470 SPGQSLI 476
G S I
Sbjct: 625 KLGCSWI 631
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 219/433 (50%), Gaps = 46/433 (10%)
Query: 21 IHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+HAH ++ + ++ L + VS+ L + A ++F++M +V+ + +MI AY+ +
Sbjct: 86 LHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHE 145
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + F ++++GI P+ +TFA +L AC DL V H EI++ GFE +
Sbjct: 146 HGQEALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGN 202
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
G+V++Y G ++ ++FD+M RDV+ N MI G+ + G ++ L LF+E+ +R V++
Sbjct: 203 GLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVIT 262
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN M++ + G A+ LF +M +Q + T++A G V G ++
Sbjct: 263 WNTMMAGYAQCGDVENAVELFEKMPEQNL-VSWNTMIA--------GYVQNGSVKEAFKL 313
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + V NA++ + + G ++ A +FK +P NVVSWNAMI+G + NG+ E +
Sbjct: 314 FQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENAL 373
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA---------------SMTGLH 364
+L+ QM + PN TF VL CA ++E+ E ++ G++
Sbjct: 374 KLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMY 433
Query: 365 SIVPNLEHYGCMVDVLGR---------------SGCVREAYDLIRSMS---IRPNAAIWG 406
+ ++E + D + + +GC +E+ +L M ++P+ +
Sbjct: 434 AKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFV 493
Query: 407 SLLSSCRTHGHVE 419
+LS+C G V+
Sbjct: 494 GVLSACCHAGLVD 506
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 188/406 (46%), Gaps = 55/406 (13%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
+ ++K+ G E + + + GIWP T+ LL+ CL L + +H +I+
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 129 SGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
+ FE I +G +V +Y G + + +VFDEM ++V+
Sbjct: 93 TQFE-CQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVV------------------- 132
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
SW MI++ + EAL F+EM+D + + T ++LP C L
Sbjct: 133 ------------SWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLE 180
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+G++ + G + V VGN LVD Y K G ++ AR +F ++P+++VVSWNAMI
Sbjct: 181 V--LGEFHDEIVK--GGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMI 236
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+G NG E ++L++++ + V G C G VE A ELF M
Sbjct: 237 AGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQC----GDVENAVELFEKMPE---- 288
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
NL + M+ ++G V+EA+ L + M R N W +++S +G VE A K
Sbjct: 289 -QNLVSWNTMIAGYVQNGSVKEAFKLFQIMPER-NVISWNAVISGFAQNGQVEEALKLFK 346
Query: 427 EL--INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+ N+ WN+ + Y++ G+ ++A L M+ ++K +
Sbjct: 347 TMPECNVVSWNA-----MIAGYSQNGQAENALKLFGQMQMVDMKPN 387
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+ H +R L+ V + I+ A K+F++MR ++MI Y++N
Sbjct: 408 NEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAIN 467
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
G S+E ++LF ++ G+ PD TF +L AC G
Sbjct: 468 GCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAG 503
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 255/462 (55%), Gaps = 33/462 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+L Q+HAH + LH+S +L +S+ T I YA ++F + NP LF+S++K S
Sbjct: 106 NLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTS 165
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G S + V + + G YTF ++KAC + LR+G+ +H ++ G+
Sbjct: 166 KFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMY 225
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ ++ LY M KVFD M +R+
Sbjct: 226 VQAALIALYAKASDMKVAKKVFDA-------------------------------MPQRT 254
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+++WN +IS ++G E++ LFH M + F+ D AT+V++L C++LGA+D G W+H
Sbjct: 255 IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHD 314
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA+ +G VV +G +L++ Y +CG + AR VF + +NVV+W AMISG +G G
Sbjct: 315 YADGNGFDLNVV-LGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGR 373
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL+ +M A G PN TFV VL+ CAH+GL++ R +F+SM + +VP +EH CM
Sbjct: 374 QAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 433
Query: 377 VDVLGRSGCVREAYDLIRS-MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
VD+ GR+G + +AY I+ + P A+W S+L +CR H + +L + ++++EP N
Sbjct: 434 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPEN 493
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+YV+LSNIYA GR D E +R M +KK G S IE
Sbjct: 494 PGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 535
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 274/552 (49%), Gaps = 77/552 (13%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT----------LNEI 50
IERK L LL TR +L QIHA LR+ L + + F++ C + L I
Sbjct: 151 IERKCLSLLQQSKTRANLLQIHAFMLRNALETNPNLFTKFIATCSSIALLAPLYDPLAGI 210
Query: 51 KYATKIFN-QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK----------------- 92
+A ++F+ + L NSMIKAY E L+ L+
Sbjct: 211 VHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAK 270
Query: 93 ----NLGIWP---------------DEYTFAPLLKACLGVGDLRVGQCVHGEII------ 127
N+ IW D Y L+ G + + + E+I
Sbjct: 271 SCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVS 330
Query: 128 ---------RSG------------FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
RSG E+ + +++ Y G M K+FDEM R V
Sbjct: 331 WTALIGGYVRSGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSV 390
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ +MI+G+ G++D LF M E+++ SWN MIS ++ + EAL+LFHEM+
Sbjct: 391 VSWTIMIYGYSSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQST 450
Query: 227 -AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ E DE T+V+VLP A LGA+D+G W+H + L R +VG AL+D Y KCG +
Sbjct: 451 TSLEPDEVTIVSVLPAIADLGALDLGGWVHRFVRRKKLDR-ATNVGTALIDMYAKCGEIV 509
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+R VF +P K SWNA+I+ A NGR + + L+ +M KG PN+ T +GVL+ C
Sbjct: 510 KSRGVFDNMPEKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACN 569
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H+GLVE+ + F +M + P +EHYGCMVD+LGR+GC++EA L+ SM N I
Sbjct: 570 HSGLVEEGKRWFKAMEEF-GLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIIL 628
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
S L +C V AE +KE I +E WN GNY++L N+YA RW +A+ ++ MR N
Sbjct: 629 SSFLFACGYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRN 688
Query: 466 NVKKSPGQSLIE 477
VKK G S IE
Sbjct: 689 GVKKEAGCSAIE 700
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 255/462 (55%), Gaps = 33/462 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+L Q+HAH + LH+S +L +S+ T I YA ++F + NP LF+S++K S
Sbjct: 42 NLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTS 101
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G S + V + + G YTF ++KAC + LR+G+ +H ++ G+
Sbjct: 102 KFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMY 161
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ ++ LY M KVFD M +R+
Sbjct: 162 VQAALIALYAKASDMKVAKKVFDA-------------------------------MPQRT 190
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+++WN +IS ++G E++ LFH M + F+ D AT+V++L C++LGA+D G W+H
Sbjct: 191 IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHD 250
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA+ +G VV +G +L++ Y +CG + AR VF + +NVV+W AMISG +G G
Sbjct: 251 YADGNGFDLNVV-LGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGR 309
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL+ +M A G PN TFV VL+ CAH+GL++ R +F+SM + +VP +EH CM
Sbjct: 310 QAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCM 369
Query: 377 VDVLGRSGCVREAYDLIRS-MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
VD+ GR+G + +AY I+ + P A+W S+L +CR H + +L + ++++EP N
Sbjct: 370 VDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPEN 429
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+YV+LSNIYA GR D E +R M +KK G S IE
Sbjct: 430 PGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIE 471
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 273/462 (59%), Gaps = 5/462 (1%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRNPSVLLFNSMIKA 74
L QI A ++ + + F+++C + + ++ YA ++FN + +P+ ++N++I+A
Sbjct: 3 QLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRA 62
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS + E + + + + + YTF LL+AC + + VHG +I+ GF
Sbjct: 63 YSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSD 122
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
++ +Y CG++ ++FD + RD + N+MI G+ K GDV +F +M
Sbjct: 123 VFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPL 182
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
++VVSW +IS L ++G+ EAL L +EM++ FELD + ++L CA LGA+D G+W+
Sbjct: 183 KNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWL 242
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP--RKNVVSWNAMISGLAFN 312
H Y ++G+ V +G ALV+ Y KCG ++ A +VF ++ +K+V W AMI G A +
Sbjct: 243 HFYVLNNGVDVDRV-IGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIH 301
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
GRG +E + +M +G+ PN TF VL C++ GLVE+ +ELF SM +++ P++EH
Sbjct: 302 GRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEH 361
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCMVD+LGRSG + EA +LI+ M ++P+A IWG+LL +C H L L+ ++
Sbjct: 362 YGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVD 421
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+SG Y+ L+ I A G+W +A +R+ M+ V SPG+S
Sbjct: 422 SDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKS 463
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/431 (36%), Positives = 249/431 (57%), Gaps = 6/431 (1%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ M +V+ +NS+I Y NGP E + LF + G +PDE T + ++ AC G
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSI-RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+ R G+ VH +++ R + +V++Y CG+ + +FD M R V+
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
++ G+ K +V+ +F +M E++V++WN++I++ ++G + EA+RLF +++ +
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLY-----RKVVSVGNALVDFYCKCGILDT 286
T VL C + + +GQ H + G V VGN+LVD Y K G +D
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
VF+ + ++ VSWNAMI G A NGR + + L+E+M+ +P+ T +GVL+ C H
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+GLV++ R F MT H I P+ +HY CMVD+LGR+G ++EA +LI+ M P++ +W
Sbjct: 505 SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWA 564
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
SLL +CR H +VEL E L L+P NSG YVLLSN+YAE G+W D +R M++
Sbjct: 565 SLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRG 624
Query: 467 VKKSPGQSLIE 477
V K PG S IE
Sbjct: 625 VSKQPGCSWIE 635
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 11/368 (2%)
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+PL L + HG +++S + +V Y G++ + +VFD +
Sbjct: 21 SPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPL 80
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--SEALRLFH 221
R+ N ++ + + G D+ LF + + S+N ++++L + GR +ALR
Sbjct: 81 RNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLA 140
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
M F L+ + + L CA + G+ +H S + V +G ALVD Y KC
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSP-HADDVHIGTALVDMYAKC 199
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
AR VF +P +NVVSWN++I+ NG + L+ +M+A G P++ T V+
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVM 259
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ CA + R++ A M + ++ +VD+ + G EA + SM R +
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR-S 318
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
S+L+ +VE A+ +++ N+ WN +L YA+ G ++A L
Sbjct: 319 VVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWN-----VLIAAYAQNGEEEEAIRLF 373
Query: 460 MWMRENNV 467
+ ++ +++
Sbjct: 374 VQLKRDSI 381
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 174/428 (40%), Gaps = 70/428 (16%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE--EPVKLFALLKNLGIW 97
+S L A +F + +P +N+++ A + +G + ++ A +
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFV 148
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
+ Y+FA L AC DLR G+ VHG + RS I +V++Y C + D +V
Sbjct: 149 LNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRV 208
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FD M R+V+ N +I + + G V EAL
Sbjct: 209 FDAMPERNVVSWNSLITCYEQNGPV-------------------------------GEAL 237
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
LF EM F DE T+ +V+ CA L A G+ +H++ R + + NALVD
Sbjct: 238 VLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDM 297
Query: 278 YCKCGILDTARNVFKEIP-------------------------------RKNVVSWNAMI 306
Y KCG AR +F +P KNV++WN +I
Sbjct: 298 YAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLI 357
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLH 364
+ A NG E + L+ Q+ + P T+ VL C + +++ ++ + G
Sbjct: 358 AAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFR 417
Query: 365 -SIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
P + + +VD+ ++G + + + M+ R N + W +++ +G + A
Sbjct: 418 FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMIVGYAQNGRAKDA 476
Query: 422 EHAVKELI 429
H + ++
Sbjct: 477 LHLFERML 484
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A +F+QM +V+ +N +I AY+ NG EE ++LF LK IWP YT+ +L A
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 110 CLGVGDLRVGQCVHGEIIRSGFE-RFG---SIRIG--VVELYTSCGQMDDGMKVFDEMSH 163
C + L++GQ H +++ GF FG + +G +V++Y G +DDG KVF+ M+
Sbjct: 395 CGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD + N MI G+ + G R +AL LF M
Sbjct: 455 RDNVSWNAMIVGYAQNG-------------------------------RAKDALHLFERM 483
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
D T++ VL C G VD G + H E G+ +VD + G
Sbjct: 484 LCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHY-TCMVDLLGRAG 542
Query: 283 ILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELG 318
L A + K++P + + V W +++ + ELG
Sbjct: 543 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELG 579
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 257/441 (58%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF + G+L + + + F +M + +V+ +N+MI Y+ G E LF +++ G+
Sbjct: 155 LLHFHASAGSLRDSR---RFFGEMADRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGL 211
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
D +T LL AC G+L VG+ VH ++ SG + ++++Y CG + +
Sbjct: 212 LADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHR 271
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
FD M ++V+ M+ K G VD F +M ER++VSWN MIS + GR E
Sbjct: 272 CFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHET 331
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L++ MR DE T+ VL C + G + G+ IH Y + V++ N+L+D
Sbjct: 332 LDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDN-FNDPGVTLLNSLLD 390
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y +CG +DTA +F E+P KNV+SWN +I LA +GR + V + M++ SP++ T
Sbjct: 391 MYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEIT 450
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FVG+L+ C+H GL+E F +M ++++ P +EHYGCMVD+LGR G + +A +LI+ M
Sbjct: 451 FVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDM 510
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
SI+P+ +WG+LL +CR HG+VE+ + +K+L+ LE G +VL+ N++ E +W+D +
Sbjct: 511 SIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMK 570
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR M+E KK G S IE
Sbjct: 571 KLRKLMKEQGTKKDMGVSSIE 591
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 227/504 (45%), Gaps = 105/504 (20%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE------IKYATKI 56
R +L LL + HL QIHAH + H + + + ++ TL+ + +A ++
Sbjct: 11 RHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRL 70
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
F+++ P ++N++++AYS + +E ++L + GI P+E+T +LKAC V +
Sbjct: 71 FDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAV 130
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
HG +++ GF + + ++ + S G + D + F EM+ R+V+ N MI G+
Sbjct: 131 EHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGY 190
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ G+V + LF EMR + +++ D T+V
Sbjct: 191 AQAGEVSEACALFGEMRHQGLLA-------------------------------DVFTLV 219
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL------------ 284
++L C+ G +++G+ +H + SG R +GNAL+D Y KCG L
Sbjct: 220 SLLFACSSEGNLEVGRLVHCHMLVSG-SRVDRILGNALLDMYGKCGDLWMAHRCFDMMPI 278
Query: 285 -------------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
D R+ F+++P +N+VSWNAMIS GR ++LY +M
Sbjct: 279 KNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRM 338
Query: 326 IAKGVSPNKATFVGVLTCCAHAG----------------------LVEKARELFA----- 358
+ G++P++ T GVL+ C G L+ +++A
Sbjct: 339 RSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLLNSLLDMYARCGQV 398
Query: 359 -SMTGLHSIVP--NLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSC 412
+ GL + +P N+ + ++ L G +E R+M + P+ + LLS+C
Sbjct: 399 DTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSAC 458
Query: 413 RTHGHVELAEH---AVKELINLEP 433
G +E E+ A+ + N+EP
Sbjct: 459 SHGGLLEAGEYYFEAMARVYNVEP 482
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 263/472 (55%), Gaps = 7/472 (1%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+++RT Q+H R I + V + + A ++F+ M +V+ +NS+
Sbjct: 165 KDSRTG-EQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSL 223
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I Y NGP E + LF + G PDE T + ++ AC G+ R G+ VH +++
Sbjct: 224 ITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDR 283
Query: 132 ERFGSI-RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
R + +V++Y CG+ + +FD M R ++ ++ G+ K +V+ +F
Sbjct: 284 LRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFS 343
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M E++V++WN++I++ ++G + EA+RLF +++ + T VL C + + +
Sbjct: 344 QMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQL 403
Query: 251 GQWIHSYAESSGLY-----RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GQ H + G V VGN+LVD Y K G +D VF+ + ++ VSWNAM
Sbjct: 404 GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAM 463
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I G A NGR + + L+E+M+ +P+ T +GVL+ C H+GLV++ R F SMT H
Sbjct: 464 IVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHG 523
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P+ +HY CMVD+LGR+G ++EA +LI M + P++ +W SLL +CR H +VEL E
Sbjct: 524 ITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTA 583
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L L+P NSG YVLLSN+YAE G+W + +R M++ V K PG S IE
Sbjct: 584 GRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIE 635
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 191/481 (39%), Gaps = 109/481 (22%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
HA L+ + +L VS L ++ A ++F+++ + +N+++ AY+ G
Sbjct: 40 HARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRP 99
Query: 82 EEPVKLFALLKNLGIWPDE-------------------------------------YTFA 104
+E LF + + PD+ Y+FA
Sbjct: 100 DEARALFEAIPD----PDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFA 155
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L AC D R G+ VHG + RS IR +V++Y C + +D +VFD M
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMP-- 213
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
ER+VVSWN +I+ ++G EAL LF EM
Sbjct: 214 -----------------------------ERNVVSWNSLITCYEQNGPVGEALMLFVEMM 244
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
F DE T+ +V+ CA L A G+ +H++ R + + NALVD Y KCG
Sbjct: 245 AAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRT 304
Query: 285 DTARNVFKEIP-------------------------------RKNVVSWNAMISGLAFNG 313
AR +F +P KNV++WN +I+ A NG
Sbjct: 305 WEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNG 364
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLH-SIVPNL 370
E + L+ Q+ + P T+ VL C + ++ ++ + G P
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPES 424
Query: 371 EHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ + +VD+ ++G + + + M+ R N + W +++ +G + A H + +
Sbjct: 425 DVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMIVGYAQNGRAKDALHLFERM 483
Query: 429 I 429
+
Sbjct: 484 L 484
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 11/368 (2%)
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+PL +L + H I++S + +V Y G++ D +VFDE+
Sbjct: 21 SPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPL 80
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--SEALRLFH 221
R+ N ++ + + G D+ LF + + S+N ++++L + GR ++ALR
Sbjct: 81 RNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLA 140
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
M F L+ + + L CA G+ +H S + V + +ALVD Y KC
Sbjct: 141 AMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSP-HADDVHIRSALVDMYAKC 199
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
+ AR VF +P +NVVSWN++I+ NG + L+ +M+A G SP++ T V+
Sbjct: 200 ERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVM 259
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ CA + R++ A M + ++ +VD+ + G EA + SM R +
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR-S 318
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
S+L+ +VE A+ +++ N+ WN +L YA+ G ++A L
Sbjct: 319 IVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWN-----VLIAAYAQNGEEEEAIRLF 373
Query: 460 MWMRENNV 467
+ ++ +++
Sbjct: 374 VQLKRDSI 381
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 249/431 (57%), Gaps = 12/431 (2%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKA 109
A K+FN ++NP ++ + +I Y + +P K F++ +L G+ PD + + A
Sbjct: 56 AQKVFNHIQNPDIVSWTCLISLYL---HTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSA 112
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVI 167
C DL G+ VHG + R FE +G ++++Y+ G ++ VF M +DV
Sbjct: 113 CGHRKDLSNGRIVHGMVFR--FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVS 170
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+++GF K D++ +F EM R+ VSW MI+ + L LF EMR +
Sbjct: 171 SWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEG 230
Query: 228 FELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ T+VAVL CA +GA D+G +H Y + L V +V NAL+D Y K G L
Sbjct: 231 KDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDV-TVNNALMDMYAKSGALVL 289
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A +F+E+P+++V SW MISGLA +G+G +E + M GV PN+ T + VL+ C+H
Sbjct: 290 ALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSH 349
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
AGLV + R LF M H I P ++HYGCMVD+LGR+G +REA +LI M I+P++ IW
Sbjct: 350 AGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWR 409
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
SLLS+C HG++ LAE A K +I LEP + G Y+LL NIY RW+DA R MR+
Sbjct: 410 SLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRR 469
Query: 467 VKKSPGQSLIE 477
VKK PG S +E
Sbjct: 470 VKKKPGCSWVE 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP-VKLFALLKNLGI-WPDEYTFAP 105
N+I+ A +IF++M + + + +MI Y + G P ++LF ++ G WP T
Sbjct: 183 NDIEAARRIFDEMPMRNSVSWTAMITGY-VQGEVPIPGLELFQEMRAEGKDWPTVITIVA 241
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L C +G +G VHG + ++ + ++ ++++Y G + +K+F EM RD
Sbjct: 242 VLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRD 301
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V SW MIS L G+ + AL F +M
Sbjct: 302 VF-------------------------------SWTTMISGLALHGKGTHALEAFSDMSK 330
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+E T+++VL C+ G V G+ + + G+ K+ G +VD + G+L
Sbjct: 331 SGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYG-CMVDLLGRAGLL 389
Query: 285 DTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
A+ + + +P + + V W +++S +G L E+ +MI
Sbjct: 390 REAKELIEHMPIKPDSVIWRSLLSACLVHGNLALA-EMAGKMI 431
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 31/329 (9%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGF--ERFGSIRIGVVELYTSCGQMDDGMKVFD 159
TF LL+ C G L + +HG+ + G + + ++ YT G D KVF+
Sbjct: 5 TFYFLLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 61
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL-MISSLGKSG--RDSEA 216
+ + D++ +I + K +F + + + ++ ++ G +D
Sbjct: 62 HIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSN 121
Query: 217 LRLFHEMRDQAFELDEATVV--AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
R+ H M + FEL +V A++ + +R GA+++ + E K VS +L
Sbjct: 122 GRIVHGMVFR-FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEI-----KDVSSWTSL 175
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL---GVELYEQMIAKGVS 331
++ + KC ++ AR +F E+P +N VSW AMI+G +GE+ G+EL+++M A+G
Sbjct: 176 LNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYV---QGEVPIPGLELFQEMRAEGKD 232
Query: 332 -PNKATFVGVLTCCAHAGLVEKARELFASMTGL---HSIVPNLEHYGCMVDVLGRSGCVR 387
P T V VL+ CA G A +L +S+ G ++ ++ ++D+ +SG +
Sbjct: 233 WPTVITIVAVLSGCADIG----AFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALV 288
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
A + + M R + W +++S HG
Sbjct: 289 LALKIFQEMPKR-DVFSWTTMISGLALHG 316
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 244 RLGAVDIGQWIHSYAESSGLY-RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ G+++ + IH A + GL K + L++ Y + G A+ VF I ++VSW
Sbjct: 12 KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSW 71
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR----ELFA 358
+IS + ++ + G+ P+ VG ++ C H + R +F
Sbjct: 72 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFR 131
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
G IV N ++D+ RSG + A + ++M I+ + + W SLL+ +
Sbjct: 132 FELGSDPIVGN-----ALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCNDI 185
Query: 419 ELAEHAVKELI--NLEPWNS--GNYV----------LLSNIYAEGGRWDDAETL 458
E A E+ N W + YV L + AEG W T+
Sbjct: 186 EAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITI 239
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 268/478 (56%), Gaps = 41/478 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMRN 62
L LL + L Q+ A ++ LH +L F++ C T +++A +F+Q+
Sbjct: 24 LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVG 119
P ++LFN+M + Y+ ++ P++ F L + G++PD+YTF LLKAC L G
Sbjct: 84 PDIVLFNTMARGYAR---TDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEG 140
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H I+ G + ++ +YT+C +MD +VFD++
Sbjct: 141 RQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKI------------------ 182
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
E VV++N MI+ + R +EAL LF E++ + + + T+++VL
Sbjct: 183 -------------WEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVL 229
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LGA+D+G+W+H Y + +G + + V V AL+D Y KCG LD A VF+ + ++
Sbjct: 230 SSCALLGALDLGKWMHEYVKKNG-FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT 288
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+W+AMI A +G G V L+++M G P++ TF+G+L C+H GLVE+ E F
Sbjct: 289 QAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYG 348
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + ++P ++HYGCMVD+LGR+G + EAY+ I + IRP +W +LLS+C +HG+VE
Sbjct: 349 MRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVE 408
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L + ++++ L+ + G+Y++LSN+ A GRW+D +R M E V K PG S +E
Sbjct: 409 LGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVE 466
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 249/432 (57%), Gaps = 14/432 (3%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKA 109
A K+FN ++NP ++ + +I Y + +P K F++ +L G+ PD + + A
Sbjct: 307 AQKVFNHIQNPDIVSWTCLISLYL---HTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSA 363
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRI---GVVELYTSCGQMDDGMKVFDEMSHRDV 166
C DL G+ VHG + R FE GS I ++++Y+ G ++ VF M +DV
Sbjct: 364 CGHRKDLSNGRIVHGMVFR--FE-LGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDV 420
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+++GF K D++ +F EM R+ VSW MI+ + L LF EMR +
Sbjct: 421 SSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAE 480
Query: 227 AFELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ T+VAVL CA +GA D+G +H Y + L V +V NAL+D Y K G L
Sbjct: 481 GKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDV-TVNNALMDMYAKSGALV 539
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A +F+E+P+++V SW MISGLA +G+G +E + M G PN+ T + VL+ C+
Sbjct: 540 LALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACS 599
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
HAGLV + R LF M H I P ++HYGCMVD+LGR+G +REA +LI M I+P++ IW
Sbjct: 600 HAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIW 659
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
SLLS+C HG++ LAE A K +I LEP + G Y+LL NIY RW+DA R MR+
Sbjct: 660 RSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDR 719
Query: 466 NVKKSPGQSLIE 477
VKK PG S +E
Sbjct: 720 RVKKKPGCSWVE 731
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP-VKLFALLKNLGI-WPDEYTFAP 105
N+I+ A +IF++M + + + +MI Y + G P ++LF ++ G WP T
Sbjct: 434 NDIEAARRIFDEMPMRNSVSWTAMITGY-VQGEVPIPGLELFQEMRAEGKDWPTVITIVA 492
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L C +G +G VHG + ++ + ++ ++++Y G + +K+F EM RD
Sbjct: 493 VLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRD 552
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V SW MIS L G+ + AL F +M
Sbjct: 553 VF-------------------------------SWTTMISGLALHGKGTHALEAFSDMSK 581
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+E T+++VL C+ G V G+ + + G+ K+ G +VD + G+L
Sbjct: 582 SGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYG-CMVDLLGRAGLL 640
Query: 285 DTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
A+ + + +P K + V W +++S +G L E+ +MI
Sbjct: 641 REAKELIEHMPIKPDSVIWRSLLSACLVHGNLALA-EMAGKMI 682
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 161/345 (46%), Gaps = 31/345 (8%)
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF--ERFGSIRIGVVE 143
K FA N + TF LL+ C G L + +HG+ + G + + ++
Sbjct: 240 KKFASYTNRNAHMNTQTFYFLLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLN 296
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL- 202
YT G D KVF+ + + D++ +I + K +F + + +
Sbjct: 297 TYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFC 356
Query: 203 MISSLGKSG--RDSEALRLFHEMRDQAFELDEATVV--AVLPICARLGAVDIGQWIHSYA 258
++ ++ G +D R+ H M + FEL +V A++ + +R GA+++ +
Sbjct: 357 VVGAVSACGHRKDLSNGRIVHGMVFR-FELGSDPIVGNALIDMYSRSGAIEVACSVFKTM 415
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL- 317
E K VS +L++ + KC ++ AR +F E+P +N VSW AMI+G +GE+
Sbjct: 416 EI-----KDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYV---QGEVP 467
Query: 318 --GVELYEQMIAKGVS-PNKATFVGVLTCCAHAGLVEKARELFASMTGL---HSIVPNLE 371
G+EL+++M A+G P T V VL+ CA G A +L +S+ G ++ ++
Sbjct: 468 IPGLELFQEMRAEGKDWPTVITIVAVLSGCADIG----AFDLGSSVHGYVNKTNLDLDVT 523
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
++D+ +SG + A + + M R + W +++S HG
Sbjct: 524 VNNALMDMYAKSGALVLALKIFQEMPKR-DVFSWTTMISGLALHG 567
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 244 RLGAVDIGQWIHSYAESSGLY-RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ G+++ + IH A + GL K + L++ Y + G A+ VF I ++VSW
Sbjct: 263 KCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSW 322
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR----ELFA 358
+IS + ++ + G+ P+ VG ++ C H + R +F
Sbjct: 323 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFR 382
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
G IV N ++D+ RSG + A + ++M I+ + + W SLL+ +
Sbjct: 383 FELGSDPIVGN-----ALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCNDI 436
Query: 419 ELAEHAVKELI--NLEPWNS--GNYV----------LLSNIYAEGGRWDDAETL 458
E A E+ N W + YV L + AEG W T+
Sbjct: 437 EAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITI 490
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 243/425 (57%), Gaps = 6/425 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD- 115
FN ++L+ S + Y NG E F ++ G+ P+ TF LL AC
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 116 -LRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+HG + G + G + +G ++++Y+ C Q+ KVF + ++ + N M
Sbjct: 109 SFFFASSLHGYACKYGLDT-GHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
++GF + G+++ + LF EM R +SW +I+ L K G +AL FH+M+ D
Sbjct: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+++AVL CA LGA+ +G W+H + ++ + + N+L+D Y +CG ++ AR VF
Sbjct: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQE-FKDNIKISNSLIDMYSRCGCIEFARQVFV 286
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
++ ++ +VSWN++I G A NG + +E + M +G P+ ++ G LT C+HAGLV K
Sbjct: 287 KMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNK 346
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
ELF +M +H I P +EHYGC+VD+ GR+G + +A ++I M ++PN + GSLL++C
Sbjct: 347 GLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAAC 406
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
RTHG V LAE +K L L+P YVLLSNIYA G+WD A +R M+ V+K PG
Sbjct: 407 RTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 466
Query: 473 QSLIE 477
S +E
Sbjct: 467 YSSVE 471
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 32/279 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
EI+ A ++F++M + + ++I +G SE+ ++ F ++ G+ D + +L
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L +G VH ++ F+ I ++++Y+ CG ++ +VF +M+ R ++
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 295
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G D E+L F M+ + F
Sbjct: 296 WNSIIVGFAVNGFAD-------------------------------ESLEFFXAMQKEGF 324
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D + L C+ G V+ G + +S + +VD Y + G L+ A
Sbjct: 325 KPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDAL 384
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
N+ +E+P K N V ++++ +G L L + +
Sbjct: 385 NMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLF 423
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 266/467 (56%), Gaps = 6/467 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAH---FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
T + Q HA L L I +H F+++ + YA I+N + +P+V N+MI
Sbjct: 45 TQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMI 104
Query: 73 KAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
+ + + L++ + ++ P+++T +L+AC +R G V +I+ GF
Sbjct: 105 RCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGF 164
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ +R ++ LY +C +++ +VFDE+ S RDV+ N MI GF + G + LF
Sbjct: 165 VKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFV 224
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
EM E+ V+SW +IS ++G +AL F E+ +Q +EA +V++L A+LG ++
Sbjct: 225 EMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEY 284
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+ IHS A S + S+G ALVD Y KCG +D +R +F +P K+ SWN MI GLA
Sbjct: 285 GKRIHSIANSLR-FPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLA 343
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G G+ + L+E+ + +G P TF+GVLT C+ AGLV + + F MT + I P +
Sbjct: 344 THGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEM 403
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGCMVD+L R+G V +A ++I M P+ +W S+L SC+ HG +EL E +LI
Sbjct: 404 EHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQ 463
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++P ++G+YV L+ I+A +W+D +R M E N K G SLIE
Sbjct: 464 MDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIE 510
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 264/467 (56%), Gaps = 8/467 (1%)
Query: 17 HLTQIHAHFLRH---KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
L QI A + + LH NLI + C + +A IF Q+ NP+V +N++IK
Sbjct: 26 QLLQIQAQLITNPPLSLH-PNLIAVKLIGACAANANLYHAQLIFAQLPNPNVFSWNAIIK 84
Query: 74 AYSLNGPSEEPVKLFALLKNL--GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
A+ G E + F +L P+EY + L+KAC G+ + G VH +I+SG
Sbjct: 85 AHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGL 144
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ + +V++Y + +VFDEM RDV+ N M+ G+C GD++ +F +
Sbjct: 145 DNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQ 204
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDI 250
M ER V+SWN MI ++G+ S+A+ +FHEM+ + D+ T+V+VL CA +GA+D
Sbjct: 205 MLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDF 264
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WI + G + +GNAL+D Y KCG ++ AR +F + ++V+SW+ MI G
Sbjct: 265 GRWIDRFVGWRGRGLNLY-LGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSG 323
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G + Y +M+ GV PN+ TF+G+L+ C+HAGLV+K ELF+ M + IVP +
Sbjct: 324 THGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKV 383
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
HYGC++D+L R+G + EA DLI SM I PN +WG+LL CR H E + L+
Sbjct: 384 GHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLE 443
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ +G+YV ++ A GR DDA + M+ + K PG S IE
Sbjct: 444 LDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIE 490
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 243/425 (57%), Gaps = 6/425 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD- 115
FN ++L+ S + Y NG E F ++ G+ P+ TF LL AC
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 116 -LRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+HG + G + G + +G ++++Y+ C Q+ KVF + ++ + N M
Sbjct: 109 SFFFASSLHGYACKYGLDT-GHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTM 167
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
++GF + G+++ + LF EM R +SW +I+ L K G +AL FH+M+ D
Sbjct: 168 LNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADY 227
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+++AVL CA LGA+ +G W+H + ++ + + N+L+D Y +CG ++ AR VF
Sbjct: 228 VSIIAVLAACADLGALTLGLWVHRFVMPQE-FKDNIKISNSLIDMYSRCGCIEFARQVFV 286
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
++ ++ +VSWN++I G A NG + +E + M +G P+ ++ G LT C+HAGLV K
Sbjct: 287 KMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNK 346
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
ELF +M +H I P +EHYGC+VD+ GR+G + +A ++I M ++PN + GSLL++C
Sbjct: 347 GLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAAC 406
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
RTHG V LAE +K L L+P YVLLSNIYA G+WD A +R M+ V+K PG
Sbjct: 407 RTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPG 466
Query: 473 QSLIE 477
S +E
Sbjct: 467 YSSVE 471
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 32/279 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
EI+ A ++F++M + + ++I +G SE+ ++ F ++ G+ D + +L
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L +G VH ++ F+ I ++++Y+ CG ++ +VF +M+ R ++
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 295
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G D E+L F+ M+ + F
Sbjct: 296 WNSIIVGFAVNGFAD-------------------------------ESLEFFYAMQKEGF 324
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D + L C+ G V+ G + +S + +VD Y + G L+ A
Sbjct: 325 KPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDAL 384
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
N+ +E+P K N V ++++ +G L L + +
Sbjct: 385 NMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLF 423
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/477 (36%), Positives = 270/477 (56%), Gaps = 15/477 (3%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIFNQMRNPSVLLFN 69
NT T L Q+HAH LR +++ + LA +SV T N+ YA IF + N + + N
Sbjct: 16 NTLTQLKQLHAHILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHLTNRNTFMHN 75
Query: 70 SMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR----VGQCVHG 124
+MI+ Y P ++L+N G+ + YTF PL+KAC+ + VG+ VHG
Sbjct: 76 TMIRGYLQCRSPLHAVSCYLSMLQN-GVAVNNYTFPPLIKACIALLPSSPSNIVGRLVHG 134
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+++ G + +E Y+ ++D +FDE S++DV++ M+ G+ K G+V
Sbjct: 135 HVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYKDVVLGTAMVDGYGKMGNVKS 194
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F +M ER+ VSW+ M+++ + E L LF EM+++ E +E+ +V VL CA
Sbjct: 195 AREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNESILVTVLTACAH 254
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
LGA+ G W+HSYA L + + ALVD Y KCG +++A +VF I K+ +WNA
Sbjct: 255 LGALTQGLWVHSYARRFHLESNPI-LATALVDMYSKCGCVESALSVFDCIVDKDAGAWNA 313
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MISG A NG ++L+ QM A PN+ TFV VLT C HA +V++ LF M+ ++
Sbjct: 314 MISGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQGLWLFEEMSSVY 373
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELA 421
+VP +EHY C++D+L R+G V EA + +A +WG+LL++CR H ++ +
Sbjct: 374 GVVPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVWGALLNACRIHKNIHVG 433
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWD-DAETLRMWMRENNVKKSPGQSLIE 477
K+L+++ + G +VL NIY E G WD +A +R + E +KK PG S+IE
Sbjct: 434 NRVWKKLVDMGVTDCGTHVLTYNIYREAG-WDVEANKVRSRIEEVGMKKKPGCSIIE 489
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 254/433 (58%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A + + M V+ +N+MI Y +G E +++F + LGI DE+T+ +L
Sbjct: 240 ELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLS 299
Query: 109 ACLGVGDLRVGQCVHGEIIRS----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
AC G G+ VH I+R+ + S+ + LY CG++D+ +VF++M +
Sbjct: 300 ACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK 359
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N ++ G+ G +D+ F EM ER++++W +MIS L ++G E+L+LF+ M+
Sbjct: 360 DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMK 419
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ FE + + CA L A+ G+ +H+ G + +S GNAL+ Y KCG++
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLG-FDSSLSAGNALITMYAKCGVV 478
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ A +F +P + VSWNAMI+ L +G G +EL+E M+ + + P++ TF+ VL+ C
Sbjct: 479 EAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTC 538
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAGLVE+ F SM+GL+ I P +HY M+D+L R+G EA D+I +M + P I
Sbjct: 539 SHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPI 598
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W +LL+ CR HG+++L A + L L P + G YVLLSN+YA GRWDD +R MR+
Sbjct: 599 WEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRD 658
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 659 KGVKKEPGCSWIE 671
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 210/490 (42%), Gaps = 83/490 (16%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL-------------- 66
+HAH + IL + V +++ A +F+++R P ++
Sbjct: 37 VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96
Query: 67 -------------------LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+N+MI YS N ++LF L G PD +TF +L
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156
Query: 108 KA-CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ---------MDDGMKV 157
A L V D + Q +H +++SG S+ ++ ++ C M K+
Sbjct: 157 GALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKL 216
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FDEM+ RD + MI G+ + G++D M E+ VV+WN MIS G EAL
Sbjct: 217 FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEAL 276
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY---AESSGLYRKVVSVGNAL 274
+F +M + DE T +VL CA G G+ +H+Y E +SV NAL
Sbjct: 277 EMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNAL 336
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNA------------------------------ 304
Y KCG +D AR VF ++P K++VSWNA
Sbjct: 337 ATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWT 396
Query: 305 -MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MISGLA NG GE ++L+ +M ++G P F G + CA + R+L A + L
Sbjct: 397 VMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRL 456
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH----VE 419
+L ++ + + G V A+ L +M + + W +++++ HGH +E
Sbjct: 457 -GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVS-WNAMIAALGQHGHGAQALE 514
Query: 420 LAEHAVKELI 429
L E +KE I
Sbjct: 515 LFELMLKEDI 524
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 161/394 (40%), Gaps = 57/394 (14%)
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI--HG 175
+ + VH +I SGF+ G I ++++Y + +FDE+ D++ R +I H
Sbjct: 33 IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
++ + ++ + R V +N MI+ + A+ LF ++ F D T
Sbjct: 93 SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152
Query: 236 VAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKC------------- 281
+VL A + + Q IH SG V SV NAL+ + KC
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSG-SGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211
Query: 282 ---------------------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
G LD AR + K VV+WNAMISG +G
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH---SIVPNLE 371
+E++ +M G+ ++ T+ VL+ CA+AG +++ A + S+ +L
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI-- 429
+ + + G V EA + M ++ + W ++LS G ++ A+ +E+
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAKSFFEEMPER 390
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
NL W L N + E E+L+++ R
Sbjct: 391 NLLTWTVMISGLAQNGFGE-------ESLKLFNR 417
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 281/481 (58%), Gaps = 10/481 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN---EIKYATKIFNQ 59
+K L LL T + + QI H + A +S C + + +A ++F
Sbjct: 11 KKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLG 70
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDL 116
+R+ S ++N++I+A++ EP K L KN+ P+ YT++ L KAC + +L
Sbjct: 71 LRHRSTFIWNTVIRAFA---EKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNL 127
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+G H + I+ G+E + ++ G+V ++ G MD K+FD S+RDVI +I+G+
Sbjct: 128 YLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGY 187
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ G V G LF +M ER+ VSW+ MI+ + G EAL LF+ M F + A +V
Sbjct: 188 VRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIV 247
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+ CA LGA+D G+WIH Y + + + V +G AL+D Y KCG ++ A ++F E+
Sbjct: 248 CAINACASLGALDQGRWIHCYIKRNRMDLDRV-MGAALIDMYAKCGCIEIACSIFGELRN 306
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++V + +ISGLA +G+ VEL+E+M ++GV PN+ TFV VL C+ GLV+K +
Sbjct: 307 RDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRI 366
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F +M+ ++ P ++HYGC+VD+LGR+G + EA L++ M ++P++ + G+LL++ R +G
Sbjct: 367 FENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYG 426
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VEL E V+ L L +SG +V+LSN+YA +WD+ +R M + V+K PG SLI
Sbjct: 427 DVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLI 486
Query: 477 E 477
+
Sbjct: 487 K 487
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 279/502 (55%), Gaps = 44/502 (8%)
Query: 17 HLTQIHA-----HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+ Q+HA FL L+ A V+V G I +A +F+Q+ P + ++N++
Sbjct: 23 QIKQVHALMVLRGFLSDPSALRELLFASAVAVRGA---IAHAYLVFDQIPRPDLFMYNTL 79
Query: 72 IKAYSLNGPSEEPVKLFALLKNLG----IWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
I+ + + V L+A + G + PD+ TF +L+AC +G G VH ++
Sbjct: 80 IRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHVV 139
Query: 128 RSGFERFGSIRIGVVELYTSCGQMD------DGM-------------------------K 156
++G E +R ++ ++ SCG++ DG K
Sbjct: 140 KAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAARK 199
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FDE +D + N+MI + K+G++ LF + ER VVSWN MIS + G A
Sbjct: 200 LFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYA 259
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK-VVSVGNALV 275
+ LF +M+ + D T++++L CA G +D+G+ +HS L V +GNAL+
Sbjct: 260 MELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTGFTVILGNALI 319
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y KCG + +A VF + K+V +WN++I GLA +G ++++++M+ + V P++
Sbjct: 320 DMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEI 379
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TFV VL C+H G+V+K RE F M + I PN++HYGCMVD+LGR+G ++EA++ I +
Sbjct: 380 TFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDT 439
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + PN+ IW +LL +CR HG +ELAEHA ++L+ SG+YVLLSNIYA G W ++
Sbjct: 440 MKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSNIYASAGEWSES 499
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
E +R M ++ V K G+++++
Sbjct: 500 EKMRKLMDDSGVNKQAGRTVVD 521
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 284/483 (58%), Gaps = 41/483 (8%)
Query: 4 KILRLL--HGRNTRTHLTQIHAHFLRHKLHQSNLILAH----FVSVCGTLNEIKYATKIF 57
K + LL +G ++ T L QIHA +RH + S+ L ++ + + YA K+F
Sbjct: 17 KCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVF 76
Query: 58 NQMRNP-SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGD 115
+++ P +V ++N++I+ Y+ G S L+ ++ G + PD +T+ L+KA + D
Sbjct: 77 SKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMAD 136
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+R+G+ +H +IRSGF GS+ + V+N ++H
Sbjct: 137 VRLGETIHSVVIRSGF---GSL----------------------------IYVQNSLLHL 165
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ GDV +F +M E+ +V+WN +I+ ++G+ EAL L+ EM + + D T+
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V++L CA++GA+ +G+ +H Y GL R + S N L+D Y +CG ++ A+ +F E+
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMV 284
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKAR 354
KN VSW ++I GLA NG G+ +EL++ M + +G+ P + TFVG+L C+H G+V++
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
E F M + I P +EH+GCMVD+L R+G V++AY+ I+SM ++PN IW +LL +C
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 404
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG +LAE A +++ LEP +SG+YVLLSN+YA RW D + +R M + VKK PG S
Sbjct: 405 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 464
Query: 475 LIE 477
L+E
Sbjct: 465 LVE 467
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 273/478 (57%), Gaps = 9/478 (1%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS--V 65
LL+ R + L QIHA + L + + A + A +F+ +PS +
Sbjct: 80 LLNQRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNHPNARILFDHYPSPSPPI 139
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLG----IWPDEYTFAPLLKACLGVGDLRVGQC 121
L+N MI+ YS S+EP+ LF + L + PDEYTF ++ +C L G+
Sbjct: 140 KLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEI 199
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG +++SGFE + V+ + + +M+D KVF++MS RDV ++ G+ K G+
Sbjct: 200 VHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGE 259
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLP 240
+D+ LF M R+ VSW +MIS GR EAL F M D +EA +V VL
Sbjct: 260 MDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLS 319
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+D G WIH Y + G+ R+ ++ AL+D Y KCG +D A VF I +++V+
Sbjct: 320 ACAHLGALDQGNWIHLYIDKIGI-RQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVL 378
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
S+ +MISGL+++G G+ + ++ QM+ + V PN+ T +GVL C+H+GLVE+ + A+M
Sbjct: 379 SFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANM 438
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
L I P +EHYGC +D+LGR+G + A +++++M + P+ IW +LLS+ R H +V L
Sbjct: 439 ESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNL 498
Query: 421 AEHAVKELINLEPWN-SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E + + L+ + +G VLLSN+YA GRW+ +R M + + SPG S IE
Sbjct: 499 GEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIE 556
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/435 (38%), Positives = 250/435 (57%), Gaps = 37/435 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L + A K+F+ + + +V+ + ++I Y G E + +F L + + PD +T
Sbjct: 160 CGYLED---AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC +GDL G+ +H I+ G R + +V++Y CG
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCG-------------- 262
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+++K +F M E+ +VSW MI +G EA+ LF +M
Sbjct: 263 -----------------NMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQM 305
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE-SSGLYRKVVSVGNALVDFYCKCG 282
+ + + D TVV VL CARLGA+++G+W+ + + LY V+ G AL+D Y KCG
Sbjct: 306 QRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVL--GTALIDLYAKCG 363
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A VFK + K+ V WNA+ISGLA NG ++ L+ Q+ G+ P+ TF+G+L
Sbjct: 364 SMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLC 423
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C HAGLV++ R F SM S+ P++EHYGCMVD+LGR+G + EA+ LIR+M + NA
Sbjct: 424 GCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANA 483
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+WG+LL +CR H +LAE A+K+LI LEPWNSGNYVLLSNIY+ +WD+A +R+ M
Sbjct: 484 IVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSM 543
Query: 463 RENNVKKSPGQSLIE 477
E ++K PG S IE
Sbjct: 544 NEKRIQKPPGCSWIE 558
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 215/414 (51%), Gaps = 34/414 (8%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+L G N+ HL +HAH LR L N +L + ++ Y +F+Q++ P++ L
Sbjct: 20 ILQGFNSFKHLKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFL 79
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+MI+ N ++ ++ + L+++ G P+ +TF +LKAC + DL++G +H ++
Sbjct: 80 WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ GF+ ++ +V LY CG ++D KVFD++ ++V+ +I G+ G + +
Sbjct: 140 KGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAID 199
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+FR + E ++ D T+V VL C +LG
Sbjct: 200 MFRRLLEMNLAP-------------------------------DSFTIVRVLSACTQLGD 228
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
++ G+WIH G+ R V VG +LVD Y KCG ++ AR+VF +P K++VSW AMI
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVF-VGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQ 287
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A NG + ++L+ QM + V P+ T VGVL+ CA G +E E + + + +
Sbjct: 288 GYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG-EWVSGLVDRNEFL 346
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
N ++D+ + G + A+++ + M + +W +++S +G+V+++
Sbjct: 347 YNPVLGTALIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKIS 399
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 274/503 (54%), Gaps = 42/503 (8%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN----EIKYATKIFNQMRNPS 64
L +HL Q HAH + L + ++ C L+ ++ +A IF NPS
Sbjct: 18 LTALTATSHLHQAHAHLIVSGLASHPFTVTRLLA-CAALSPSASDLPHAKTIFLHTHNPS 76
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+FN++I A S + + V + + + G +PD +TF L+K+ +G +H
Sbjct: 77 PFMFNTIIMASS---RTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHA 133
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE-MSHRDVIVRNLMIHGFCKKGDVD 183
+++ G +R + ++ LY+S ++ KVFDE S DV+ +I GF G +D
Sbjct: 134 HVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQID 193
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD------------------ 225
+ +F M ++ VSWN MIS S R +EA +LF EM D
Sbjct: 194 EARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGM 253
Query: 226 --QAFEL------------DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+A +L +EA +V+ + CA+L A++ G+W+HSY + L R V++G
Sbjct: 254 CNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKL-RINVTLG 312
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
L+D Y KCG + A VF + +NV SWN+MI+GLA NG G+ + L+ +M G S
Sbjct: 313 TVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPS 372
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN TF+ +LT C+H+GL+ + R LF+ MT ++ I P L+HYGCMVD+LGR+G V+EA D
Sbjct: 373 PNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALD 432
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+ M ++P++ +WG+L+ +CR HG VEL E K LI+LEP + G Y LL NI+A R
Sbjct: 433 FVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQR 492
Query: 452 WDDAETLRMWMRENNVKKSPGQS 474
WDD +R + V K+PG +
Sbjct: 493 WDDVAMVRDLEKGRKVLKNPGNN 515
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 252/429 (58%), Gaps = 32/429 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A ++F++MR+ S++ +N+MI Y+ NG + +F +++ P+E T A +L
Sbjct: 177 EVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLS 236
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C +GDL +G +RI +++D + M IV
Sbjct: 237 ICAKLGDLEMG-----------------LRIK---------KLNDNKNLGSNM-----IV 265
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M+ + K G VD G +F M R VV+W+ MI+ ++GR +EAL LF M+
Sbjct: 266 STAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQI 325
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ ++ T+V+VL CA+LG+V+ G+ I SY ES GL V V +AL+ Y KCG + AR
Sbjct: 326 KPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVY-VASALLGMYSKCGNIIKAR 384
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+F ++P+++ V+WN+MI GLA NG E + LY +M V PN TFVG++T C HAG
Sbjct: 385 QIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAG 444
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
VE E F SM H+I PN+EH+ C+VD+ RSG + +AY+ I M + PN IWG+L
Sbjct: 445 HVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTL 504
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+ R H +VELAE A K+L+ LEP NSGNYV+LSNIYA GRW +A +R M++ V+
Sbjct: 505 LSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQ 564
Query: 469 KSPGQSLIE 477
K+ S +E
Sbjct: 565 KAAAYSWVE 573
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 52/496 (10%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+ER ++ LLH L QI A + L + L + ++ + I+YA ++F+Q+
Sbjct: 1 MERYLIDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLLNA----SFIQYARQVFDQI 56
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P + S I AYS + E ++ F + + +T P+ K+C + + VG+
Sbjct: 57 PHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGK 116
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +IR GF + ++ Y + +FD + +D I N +I + + G
Sbjct: 117 QVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSG 176
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+V LF +MR+RS+VSWN MIS ++G + +F M+D+ E +E T+ VL
Sbjct: 177 EVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLS 236
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
ICA+LG +++G I ++ L ++ V A+++ Y KCG +D R VF + R++VV
Sbjct: 237 ICAKLGDLEMGLRIKKLNDNKNLGSNMI-VSTAMLEMYVKCGAVDDGRLVFDHMARRDVV 295
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE--------- 351
+W+AMI+G A NGR +EL+E M + + PN T V VL+ CA G VE
Sbjct: 296 TWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV 355
Query: 352 --------------------------KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
KAR++F + ++ N M+ L +G
Sbjct: 356 ESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWN-----SMIMGLAINGF 410
Query: 386 VREA---YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI---NLEPWNSGNY 439
+A Y+ ++ + ++PN + L+++C GHVEL + + N+ P N ++
Sbjct: 411 AEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISP-NIEHF 469
Query: 440 VLLSNIYAEGGRWDDA 455
+ +++ GR DA
Sbjct: 470 ACIVDLFCRSGRLIDA 485
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 277/507 (54%), Gaps = 36/507 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNP 63
L LL+ LTQIH F+++ + + + C + + YA ++ P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCV 122
+FN++++ YS + V +F + G ++PD ++FA ++KA LR G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI--------------- 167
H + ++ G E + ++ +Y CG ++ KVFDEM +++
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 168 -----------VRN-----LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
VRN +M+ G+ K G+++ +F EM R VSW+ MI + +G
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+E+ F E++ +E ++ VL C++ G+ + G+ +H + E +G Y +VSV
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG-YSWIVSVN 307
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKN-VVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+D Y +CG + AR VF+ + K +VSW +MI+GLA +G+GE V L+ +M A GV
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
+P+ +F+ +L C+HAGL+E+ + F+ M ++ I P +EHYGCMVD+ GRSG +++AY
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
D I M I P A +W +LL +C +HG++ELAE + L L+P NSG+ VLLSN YA G
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+W D ++R M +KK+ SL+E
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVE 514
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 264/471 (56%), Gaps = 40/471 (8%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMRNPSVLLFNSM 71
+ HL QIHA LR L +++ + HF S +I Y+ ++F+Q NP++ N+M
Sbjct: 24 KLHLRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 72 IKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
I+A+SL+ E +LF AL +N+ + + + LK C+ GDL G +HG+I G
Sbjct: 84 IRAFSLSQTPCEGFRLFRALRRNISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDG 143
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +++LY++C D KVFDE+ RD
Sbjct: 144 FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDT------------------------ 179
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---DQAFELDEATVVAVLPICARLGA 247
VSWN++IS ++ R + L LF +M+ D+ + D T + L CA LGA
Sbjct: 180 -------VSWNVLISCYLRNKRTRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGA 232
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+D G+ +H + + +GL +++ N LV Y +CG +D A VF + +NVVSW AMIS
Sbjct: 233 LDFGKQVHDFIDENGL-SGALNLSNTLVSMYSRCGSMDKAYEVFNRMRERNVVSWTAMIS 291
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM-TGLHSI 366
GLA NG G+ +E + +M+ G+SP + T G+L+ C+H+GLV++ F M +G I
Sbjct: 292 GLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKI 351
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
PNL HYGC+VD+LGR+ + +AY LI+SM ++P++ IW +LL +CR HG+VEL E +
Sbjct: 352 KPNLHHYGCIVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGNVELGERVIA 411
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LI + +G+YVLL N Y+ G+W+ LR M++ ++ +PG S IE
Sbjct: 412 HLIEFKAEEAGDYVLLLNTYSSVGKWEKVTELRSLMKKKRIQTNPGCSAIE 462
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 172/461 (37%), Positives = 258/461 (55%), Gaps = 37/461 (8%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H I A L ++ +N +L + S CG LN A ++F +M +V+ + SMI Y
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMY-SKCGDLNS---AIRVFERMDEKTVVSWTSMITGYV 430
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G S+ +KLF +K+ G+ PD Y +L AC G+L+ G+ VH I + E
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ + ++Y CG M D VF SH M+++
Sbjct: 491 VSNALTDMYAKCGSMKDAHDVF---SH----------------------------MKKKD 519
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
V+SWN MI K+ +EAL LF EM+ ++ + D TV +LP CA L A+D G+ IH
Sbjct: 520 VISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHG 578
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA +G Y + V NA+VD Y KCG+L AR++F IP K++VSW MI+G +G G
Sbjct: 579 YALRNG-YSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGS 637
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ + QM G+ P++ +F+ +L C+H+GL+++ ++F M I PNLEHY CM
Sbjct: 638 EAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACM 697
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L R+G + +A+ I++M I+P+A IWG+LL CR H V+LAE + + LEP N+
Sbjct: 698 VDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENT 757
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G YVLL+NIYAE +W++ + LR + + +KK+PG S IE
Sbjct: 758 GYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIE 798
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 179/366 (48%), Gaps = 36/366 (9%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L E +F+++ + L+N MI YS +G E + LF + LGI P+ YTF
Sbjct: 198 CGDLKE---GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+ +LK V + G+ VHG I + GF + ++ ++ Y ++ K+FDE++
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD V+SWN MIS K+G D + +F +M
Sbjct: 315 RD-------------------------------VISWNSMISGYVKNGLDDRGIEIFIKM 343
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
++D AT+V V CA +G + +G+ +HSY+ + + V N L+D Y KCG
Sbjct: 344 LVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGD 403
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L++A VF+ + K VVSW +MI+G G + ++L+++M ++GV P+ +L
Sbjct: 404 LNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNA 463
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CA G + K+ ++ +++ N + D+ + G +++A+D+ M + +
Sbjct: 464 CAINGNL-KSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVI 521
Query: 404 IWGSLL 409
W +++
Sbjct: 522 SWNTMI 527
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 202/468 (43%), Gaps = 71/468 (15%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H + + N ++ +S +++ A K+F+++ + V+ +NSMI Y NG
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIR 138
+ +++F + G+ D T + AC +G L +G+ +H I++ +R
Sbjct: 332 LDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN 391
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y+ CG ++ ++VF+ M + V+ MI G+ ++G D + LF EM+ R VV
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
D V ++L CA G + G+ +H Y
Sbjct: 452 P-------------------------------DVYAVTSILNACAINGNLKSGKIVHDYI 480
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ L V NAL D Y KCG + A +VF + +K+V+SWN MI G N
Sbjct: 481 RENNLETNSF-VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEA 539
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTG-------------- 362
+ L+ +M + P+ T +L CA ++K RE+ +A G
Sbjct: 540 LTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDM 598
Query: 363 ------------LHSIVPN--LEHYGCMVDVLGRSGCVREA---YDLIRSMSIRPNAAIW 405
L ++PN L + M+ G G EA ++ +R I P+ +
Sbjct: 599 YVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF 658
Query: 406 GSLLSSCRTHGHVELA---EHAVKELINLEPWNSGNYVLLSNIYAEGG 450
S+L +C G ++ + +K+ +EP N +Y + ++ A G
Sbjct: 659 ISILYACSHSGLLDEGWKIFNIMKKECQIEP-NLEHYACMVDLLARTG 705
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 169/367 (46%), Gaps = 42/367 (11%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM----IHGFCKKGDVDKGLYLFREMRERS 196
+++L + DG +V + V++ ++ + + K GD+ +G +F ++ E
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+ WNLMIS SG E++ LF +M + + + T ++L A + V+ G+ +H
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
G + +V N+L+ FY + A+ +F E+ ++V+SWN+MISG NG +
Sbjct: 276 LICKLG-FNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
G+E++ +M+ GV + AT V V CA+ G + + L + ++ + +
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 377 VDVLGR--------------------------SGCVREA--------YDLIRSMSIRPNA 402
+D+ + +G VRE +D ++S + P+
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 403 AIWGSLLSSCRTHGHVELAE--HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
S+L++C +G+++ + H NLE NS L+++YA+ G DA +
Sbjct: 455 YAVTSILNACAINGNLKSGKIVHDYIRENNLET-NSFVSNALTDMYAKCGSMKDAHDVFS 513
Query: 461 WMRENNV 467
M++ +V
Sbjct: 514 HMKKKDV 520
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ L ++ F+L ++L +CA ++ G+ + S ESSG+ + +G LV
Sbjct: 136 AMELLCSSQNSNFDL--GAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGI-LGVKLV 192
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG--VELYEQMIAKGVSPN 333
Y KCG L R VF ++ + WN MIS ++G G G + L++QM+ G+ PN
Sbjct: 193 FMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS--EYSGSGNYGESINLFKQMLELGIKPN 250
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL------GRSGCVR 387
TF +L C A VE+ R++ + L Y +V+ L GR VR
Sbjct: 251 SYTFSSILKCFAAVARVEEGRQVHGLICKL-----GFNSYNTVVNSLISFYFVGRK--VR 303
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
A L ++ R + W S++S +G
Sbjct: 304 CAQKLFDELTDR-DVISWNSMISGYVKNG 331
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 276/463 (59%), Gaps = 17/463 (3%)
Query: 22 HAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
A +L + + N+I V+ + +++ A + F+ M SV+ +N+M+ Y+ NG
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS---- 136
+EE ++LF + N GI PDE T+ ++ AC GD C+ ++R+ ++
Sbjct: 241 AEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD----PCLAASLVRTLHQKQIQLNCF 296
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+R ++++Y CG + ++FDE+ ++R+ + N MI + + G++D LF M R
Sbjct: 297 VRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR 356
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+VV+WN MI+ ++G+ + A+ LF EM + DE T+V+V+ C LGA+++G W+
Sbjct: 357 NVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWV 416
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
+ + + + +S NA++ Y +CG ++ A+ VF+E+ ++VVS+N +ISG A +G
Sbjct: 417 VRFLTENQI-KLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGH 475
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G + L M G+ P++ TF+GVLT C+HAGL+E+ R++F S+ P ++HY
Sbjct: 476 GVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYA 530
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGR G + +A + M + P+A ++GSLL++ R H VEL E A +L LEP
Sbjct: 531 CMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPD 590
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NSGN++LLSNIYA GRW D E +R M++ VKK+ G S +E
Sbjct: 591 NSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVE 633
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 222/469 (47%), Gaps = 75/469 (15%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKI-FNQMRNPSVLLFNSMIKA 74
+HL Q+HA + + LH N +A ++ C L + T + FN NP+V +F SM++
Sbjct: 15 SHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRF 74
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS + V +F ++ G+ PD + + L+K+ G+ +G H +++ G
Sbjct: 75 YSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS---AGNGGIG--FHAHVLKLGHGSD 129
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDE---------------------------------M 161
+R V+++Y G + KVFDE M
Sbjct: 130 AFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVM 189
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
R+VI M+ G+ K D++ F M ERSVVSWN M+S ++G E LRLF
Sbjct: 190 PERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFD 249
Query: 222 EMRDQAFELDEATVVAVLPICARLG----AVDIGQWIHS----------------YAESS 261
EM + E DE T V V+ C+ G A + + +H YA+
Sbjct: 250 EMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCG 309
Query: 262 ------------GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G YR V+ NA++ Y + G LD+AR +F +P +NVV+WN+MI+G
Sbjct: 310 SIGAARRIFDELGAYRNSVT-WNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGY 368
Query: 310 AFNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A NG+ + +EL+++MI AK ++P++ T V V++ C H G +E + +T + I
Sbjct: 369 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTE-NQIKL 427
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
++ + M+ + R G + +A + + M+ R + + +L+S HGH
Sbjct: 428 SISGHNAMIFMYSRCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAHGH 475
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 131/327 (40%), Gaps = 66/327 (20%)
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSGR 212
+F+ + +V V M+ + D K + +F M+ + ++I S G G
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115
Query: 213 DSEA--LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
A L+L H AF + AV+ + ARLG IG + E RKV
Sbjct: 116 GFHAHVLKLGHG--SDAFVRN-----AVIDMYARLGP--IGHARKVFDEIPDYERKVAD- 165
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI------------------------ 306
NA+V Y K A+ +F +P +NV++W AM+
Sbjct: 166 WNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV 225
Query: 307 -------SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG----LVEKARE 355
SG A NG E + L+++M+ G+ P++ T+V V++ C+ G R
Sbjct: 226 VSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRT 285
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
L L+ V ++D+ + G + A + + N+ W +++S+
Sbjct: 286 LHQKQIQLNCFVRT-----ALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRV 340
Query: 416 GHVELAEHAVKELINLEP------WNS 436
G+++ A +EL N P WNS
Sbjct: 341 GNLDSA----RELFNTMPGRNVVTWNS 363
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 277/507 (54%), Gaps = 36/507 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNP 63
L LL+ LTQIH F+++ + + + C + + YA ++ P
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCV 122
+FN++++ YS + V +F + G ++PD ++FA ++KA LR G +
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI--------------- 167
H + ++ G E + ++ +Y CG ++ KVFDEM +++
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 180
Query: 168 -----------VRN-----LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
VRN +M+ G+ K G+++ +F EM R VSW+ MI + +G
Sbjct: 181 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 240
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+E+ F E++ +E ++ VL C++ G+ + G+ +H + E +G Y +VSV
Sbjct: 241 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG-YSWIVSVN 299
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKN-VVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+D Y +CG + AR VF+ + K +VSW +MI+GLA +G+GE V L+ +M A GV
Sbjct: 300 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 359
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
+P+ +F+ +L C+HAGL+E+ + F+ M ++ I P +EHYGCMVD+ GRSG +++AY
Sbjct: 360 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 419
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
D I M I P A +W +LL +C +HG++ELAE + L L+P NSG+ VLLSN YA G
Sbjct: 420 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 479
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+W D ++R M +KK+ SL+E
Sbjct: 480 KWKDVASIRKSMIVQRIKKTTAWSLVE 506
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 278/507 (54%), Gaps = 36/507 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNP 63
L LL+ + T QIHA+ L+ L I + C + + YA ++F NP
Sbjct: 9 LSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNP 68
Query: 64 SVLLFNSMIKA-YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
V + N++I+ Y + P + +K + +N PD ++FA ++KA + +RVG +
Sbjct: 69 DVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQL 128
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H + + G + + ++ +Y CG + KVFDEM + I N M+ C+ GD+
Sbjct: 129 HCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRGGDM 188
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSG--------------RDS-------------- 214
G LF M R+++SWN+M++ K+G +D
Sbjct: 189 KGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNG 248
Query: 215 ---EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
EA F E++ + +E ++ VL CA+ GA++ G+ +H + E SGL +VSV
Sbjct: 249 YFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGL-AWIVSVN 307
Query: 272 NALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+D Y KCG + A+ VF+ I +N+VSW +M++ LA +G GE + ++ +M G+
Sbjct: 308 NALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGI 367
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P++ F+ +L C+HAGLVE+ E F M G+++I P++EHYGCMVD+ GR+G +++AY
Sbjct: 368 RPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAY 427
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+ + M I A IW +LL +C HG V+LAE + L L+P NS ++VLLSN YA G
Sbjct: 428 EFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAG 487
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+W DA ++R M E + K+PG S+IE
Sbjct: 488 KWKDAASVRRSMTEQRITKTPGWSMIE 514
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 274/503 (54%), Gaps = 47/503 (9%)
Query: 17 HLTQIHAHF-LRHKLHQS---NLILAHFVSVCGTLNEIKYATK-IFNQMRNPSVLLFNSM 71
+L ++H+ + H LH + + L +VCG ++T+ IF+++ +V+ FN M
Sbjct: 53 YLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGE----PWSTRHIFDEIPKKNVVFFNVM 108
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I++Y N + + +F + GI PD YT+ +LKA G DL VG +H ++R G
Sbjct: 109 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 168
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ + G++ +Y CG + + +V D+M RDV+ N ++ G + G D L + +E
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 228
Query: 192 MR-------------------------------------ERSVVSWNLMISSLGKSGRDS 214
M +S+VSWN+MI+ + +
Sbjct: 229 MELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA 288
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EA+ +F +M D A + D ++ +VLP C L A+ +G+ IH Y L ++ + NAL
Sbjct: 289 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL-LENAL 347
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
+D Y KCG L+ AR VF ++ ++VVSW +MIS NG+G V L+ +M G++P+
Sbjct: 348 IDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDS 407
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
FV VL+ C+HAGL+++ R F MT IVP +EH+ CMVD+LGR+G V EAY I+
Sbjct: 408 IAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIK 467
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
M + PN +WG+LLS+CR + ++ + A +L L P SG YVLLSNIYA+ GRW+D
Sbjct: 468 QMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWED 527
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
T+R M+ +KK PG S E
Sbjct: 528 VTTVRSIMKTKGIKKMPGVSNFE 550
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 240/392 (61%), Gaps = 5/392 (1%)
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELY 145
F + G+ P T+ +L AC + +G VH ++ SG +++G ++++Y
Sbjct: 111 FVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGV--LPDLKVGNALIDMY 168
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
C +MD ++F+ M R+ + +I GF + G VD+ LF M ER VSW MI
Sbjct: 169 AECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMID 228
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++G+ EAL +F EM+ DE T+V+V+ CA+LGA++ G+W Y G+
Sbjct: 229 GYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKM 288
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
VGNALVD Y KCG + A VFKE+ ++ +W A+I GLA NG GE + ++ +M
Sbjct: 289 DTF-VGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRM 347
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+ +P++ TF+GVLT C HAGLV+K R+ F SMTG + I PN+ H+GC++D+LGR+G
Sbjct: 348 LRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGK 407
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
++EA + I +M +RPN+AIWG+LL++CR HG+ E+ + A + L+ L+ N Y+LLSN+
Sbjct: 408 LKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNL 467
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA+ RW+D LR + E +KK PG SLIE
Sbjct: 468 YAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIE 499
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 146/359 (40%), Gaps = 63/359 (17%)
Query: 95 GIWPDEYTFAPLLKACLGVGDL-RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
G PD YTF PLLKA + VG VH +++ G E + +V +Y + G D
Sbjct: 13 GARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAARG---D 69
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
G + R L+ + GD + V WN +IS +S +
Sbjct: 70 G-----------AVARTLLDAWPARGGD--------------TPVVWNALISGHRRSRQF 104
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+ F +M T + VL C + + +G +H +SG+ + VGNA
Sbjct: 105 RLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPD-LKVGNA 163
Query: 274 LVDFYCKC-------------------------------GILDTARNVFKEIPRKNVVSW 302
L+D Y +C G +D AR +F +P ++ VSW
Sbjct: 164 LIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSW 223
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
AMI G G+ +E++ +M V ++ T V V+T CA G +E M+
Sbjct: 224 TAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMS- 282
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H I + +VD+ + G +++A + + M IR + W +++ +GH E A
Sbjct: 283 RHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIR-DKFTWTAVILGLAVNGHGEEA 340
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 34/282 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L ++ A +F+ M + + +MI Y G E +++F ++ + DE+T +
Sbjct: 202 LGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSV 261
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+ AC +G L G+ + R G + + +V++Y+ CG + + VF EM RD
Sbjct: 262 VTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDK 321
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+W +I L +G EA+ +F+ M
Sbjct: 322 F-------------------------------TWTAVILGLAVNGHGEEAINMFYRMLRV 350
Query: 227 AFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
DE T + VL C G VD G+ + S S G+ V+ G L+D + G L
Sbjct: 351 FEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFG-CLIDLLGRAGKLK 409
Query: 286 TARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
A +P R N W +++ +G E+G E ++
Sbjct: 410 EALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLL 451
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 27 RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVK 86
RH + + V + I+ A +F +M + ++I ++NG EE +
Sbjct: 283 RHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAIN 342
Query: 87 LFALLKNLGIWPDEYTFAPLLKACLGVG 114
+F + + PDE TF +L AC G
Sbjct: 343 MFYRMLRVFEAPDEVTFIGVLTACTHAG 370
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 182/515 (35%), Positives = 276/515 (53%), Gaps = 44/515 (8%)
Query: 5 ILRLLHGRNTRTHL---TQIHAHFLRHKLHQS-----NLILAHFVSVCG---TLNEIKYA 53
++R GR+T T+L QIHA + + + L+L +S+ G T +YA
Sbjct: 1 MIRKRRGRSTITNLGTLRQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYA 60
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
++F Q+ P ++N+ I+ S + V L+A + + + PD +TF +LKAC +
Sbjct: 61 VQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKL 120
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ G VHG + R GF +R ++ + CG + +FD+ DV+ + +I
Sbjct: 121 FWVNTGSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALI 180
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF------------- 220
G+ ++GD+ LF EM +R +VSWN+MI++ K G A RLF
Sbjct: 181 AGYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNA 240
Query: 221 -------HEMRDQAFEL-----------DEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
H + +A EL DE T++++L CA LG D G+ +H+
Sbjct: 241 MVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELN 298
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ +GNALVD Y KCG + VF I K++VSWN++I GLAF+G E + L+
Sbjct: 299 KGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLF 358
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
+M V P++ TFVGVL C+H G V++ F M + I PN+ H GC+VD+L R
Sbjct: 359 REMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLAR 418
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
+G ++EA+D I SM I PNA +W SLL +C+ HG VELA+ A ++L+ + SG+YVLL
Sbjct: 419 AGLLKEAFDFIASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLL 478
Query: 443 SNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SN+YA G WD AE +R M +N V K+ G S +E
Sbjct: 479 SNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFVE 513
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 268/471 (56%), Gaps = 11/471 (2%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIFNQMRNPSVLLFNSMI 72
+ L QIHA+ L+ L +S + +S+ T N +A IF + ++ ++NSMI
Sbjct: 25 SQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLSLRNIFMYNSMI 84
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCVHGEIIRSG 130
+ Y L+ + + + N G+ + YTF PL+KAC LG +G VH ++ G
Sbjct: 85 RGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVTFG 144
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F+ + ++E Y+ M +FD + +RDV++ MI G+ K GDV+ LF
Sbjct: 145 FDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFE 204
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M ER+ +SW+ ++++ + G E L LF M++ +E+ +V+VL CA LGA+
Sbjct: 205 DMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGALAQ 264
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G W+HSYA+ + + ALVD Y KCG +++A + F+ IP K+ +WNAMISG+A
Sbjct: 265 GLWVHSYAKQCNFDSNPI-LATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVA 323
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG +EL+ +MI+ G P + TFV VLT C HA LV++ +LF M+ + + P L
Sbjct: 324 MNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQL 383
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
EHY C+VD++ R+G + EA I R +A +WG++L +CRT+G++E+ K+
Sbjct: 384 EHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYGNIEVGNRVWKK 443
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWD-DAETLRMWMRENNVKKSPGQSLIE 477
L ++ + G +VL N+Y E G WD +A+ +R + E +KK PG S+IE
Sbjct: 444 LADMGVADCGTHVLSYNLYREAG-WDMEAKRVRRLISEAGMKKKPGCSIIE 493
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 273/480 (56%), Gaps = 44/480 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSN-LILAHFVSVCG---TLNEIKYATKIFNQM 60
IL L+ + L QI A+ + K HQ+N +L ++ C T+ + +A ++F+++
Sbjct: 38 ILSLIPKCTSLRELKQIQAYTI--KTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKI 95
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLR 117
P ++LFN+M + Y+ ++P++ L + G+ PD+YTF+ LLKAC + L
Sbjct: 96 PQPDIVLFNTMARGYAR---FDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALE 152
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ +H ++ G + ++ +YT+C +D +VFD++
Sbjct: 153 EGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIG--------------- 197
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
E VV++N +I+S ++ R +EAL LF E+++ + + T++
Sbjct: 198 ----------------EPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLV 241
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
L CA LGA+D+G+WIH Y + +G + + V V AL+D Y KCG LD A +VFK++PR+
Sbjct: 242 ALSSCALLGALDLGRWIHEYVKKNG-FDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRR 300
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+ +W+AMI A +G G + + +M V P++ TF+G+L C+H GLVE+ E F
Sbjct: 301 DTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYF 360
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SMT + IVP+++HYGCM+D+LGR+G + EA I + I+P +W +LLSSC +HG+
Sbjct: 361 HSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGN 420
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VE+A+ ++ + L+ + G+YV+LSN+ A GRWDD LR M + K PG S IE
Sbjct: 421 VEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIE 480
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/434 (37%), Positives = 252/434 (58%), Gaps = 2/434 (0%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
L IK A K+F++M V+ +N+M+ A++ G +E ++ ++ + LGI + ++FA
Sbjct: 137 AKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFA 196
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L C+ + ++ + + VHG+I+ +GF + V++ Y CG M D K+FDEMS R
Sbjct: 197 GVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSAR 256
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ M+ G+ K GD+ LF EM E++ VSW +IS ++G +AL LF +M
Sbjct: 257 DVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMM 316
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D+ T + L CA + ++ G+ IH+Y + V +AL+D Y KCG L
Sbjct: 317 LFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVV-SALIDMYSKCGSL 375
Query: 285 DTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
R VF + K +VV WN +IS LA +G GE +++ + M+ G P+K TFV +L
Sbjct: 376 GIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNA 435
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+GLV++ F SM+ + IVP+ EHY C++D+LGR+GC E D + M +P+
Sbjct: 436 CSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDR 495
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W +LL CR HGH+EL A + LI LEP +S YVLLS+IYA GRW+ + +R M
Sbjct: 496 VWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMN 555
Query: 464 ENNVKKSPGQSLIE 477
E VKK S +E
Sbjct: 556 ERQVKKERAISWLE 569
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 183/382 (47%), Gaps = 40/382 (10%)
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS-IRIGV 141
E V L G+ D T A LL+ C LR G+ VH + +G +R G+ + +
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ +Y CG+ + KVFD+MS R++ N M+ G+ K G + LF +M E+ VVSWN
Sbjct: 102 INMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWN 161
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
M+ + + G EALR + E R + + + VL +C +L V + + +H +
Sbjct: 162 TMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVA 221
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFK----------------------------- 292
G VV + ++++D Y KCG++ AR +F
Sbjct: 222 GFLSNVV-LSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANEL 280
Query: 293 --EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
E+P KN VSW A+ISG A NG G +EL+ +M+ V P++ TF L CA +
Sbjct: 281 FVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASL 340
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV---REAYDLIRSMSIRPNAAIWGS 407
+ +++ A + ++ PN ++D+ + G + R+ +DL M + + +W +
Sbjct: 341 KHGKQIHAYLLRIN-FQPNTIVVSALIDMYSKCGSLGIGRKVFDL---MGNKLDVVLWNT 396
Query: 408 LLSSCRTHGHVELAEHAVKELI 429
++S+ HG E A + +++
Sbjct: 397 IISALAQHGCGEEAIQMLDDMV 418
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
I L K + +EA+ + + LD T+ ++L CA A+ G+ +H + + +GL
Sbjct: 31 IVKLCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGL 90
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
R + N L++ Y KCG AR VF ++ +N+ SWN M+SG A G + +L++
Sbjct: 91 KRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFD 150
Query: 324 QMIAK-------------------------------GVSPNKATFVGVLTCCAHAGLVEK 352
+M K G+ N +F GVLT C V
Sbjct: 151 KMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGL 210
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R++ + + + N+ ++D + G + +A L MS R + W +++S
Sbjct: 211 TRQVHGQIL-VAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSAR-DVLAWTTMVSGY 268
Query: 413 RTHGHVELAEHAVKELINLEP 433
G ++ A E+ P
Sbjct: 269 AKWGDMKSANELFVEMPEKNP 289
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-SVLLFNSMIKAY 75
H QIHA+ LR + ++++ + + + K+F+ M N V+L+N++I A
Sbjct: 342 HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISAL 401
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ +G EE +++ + G PD+ TF +L AC G ++ G
Sbjct: 402 AQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQG 445
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 174/435 (40%), Positives = 256/435 (58%), Gaps = 25/435 (5%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWP---DEYTFA 104
+ YA ++F+Q+ +P++ L+NSM + Y+ SE ++F + +N+ W + Y +
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYA---QSESYREIFCEMFERNVVAWTSMINGYILS 57
Query: 105 PLLKACLGVGDLRVGQ-CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L + + DL + V I+ SG Y G M + K+F EM +
Sbjct: 58 ADLVSARRLFDLAPERDVVLWNIMVSG--------------YIEGGDMVEARKLFHEMPN 103
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RDV+ N ++ G+ G+V+ LF EM ER++ SWN +I +G E L F M
Sbjct: 104 RDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRM 163
Query: 224 RDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
++ ++AT+V VL CARLGA+D+G+W+H YAESSGL + V VGNAL+D Y KCG
Sbjct: 164 LSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGL-KGNVYVGNALMDMYAKCG 222
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
I++ A +VF+ + K+++SWN +I GLA + RG + L+ QM G P+ TF+G+L
Sbjct: 223 IIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILC 282
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C H GLVE F SM + I+P +EHYGCMVD+L R+G + +A +R M + +
Sbjct: 283 ACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADG 342
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
IW LL +CR + +VELAE A++ LI LEP N NYV+LSNIY + GRW+D L++ M
Sbjct: 343 VIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAM 402
Query: 463 RENNVKKSPGQSLIE 477
R+ KK PG SLIE
Sbjct: 403 RDTGFKKLPGCSLIE 417
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
L+ ++ N ++ + CG I+ A +F M ++ +N++I +++ + +
Sbjct: 204 LKGNVYVGNALMDMYAK-CGI---IENAISVFRGMDTKDLISWNTLIGGLAMHSRGADAL 259
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGFERFGSIRIG 140
LF +KN G PD TF +L AC +G + G +I E +G +
Sbjct: 260 NLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCM--- 316
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD----VDKGLYLFREMRERS 196
V++ G+++ M +M V + G C+ + L E+ ++
Sbjct: 317 -VDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN 375
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
++ ++ + G +GR + RL MRD F+
Sbjct: 376 PANYVMLSNIYGDAGRWEDVARLKVAMRDTGFK 408
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/503 (34%), Positives = 274/503 (54%), Gaps = 47/503 (9%)
Query: 17 HLTQIHAHF-LRHKLHQS---NLILAHFVSVCGTLNEIKYATK-IFNQMRNPSVLLFNSM 71
+L ++H+ + H LH + + L +VCG ++T+ IF+++ +V+ FN M
Sbjct: 1042 YLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGE----PWSTRHIFDEIPKKNVVFFNVM 1097
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I++Y N + + +F + GI PD YT+ +LKA G DL VG +H ++R G
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGL 1157
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ + G++ +Y CG + + +V DZM RDV+ N ++ G + G D L + +E
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217
Query: 192 MR-------------------------------------ERSVVSWNLMISSLGKSGRDS 214
M +S+VSWN+MI+ + +
Sbjct: 1218 MELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPA 1277
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EA+ +F +M D A + D ++ +VLP C L A+ +G+ IH Y L ++ + NAL
Sbjct: 1278 EAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL-LENAL 1336
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
+D Y KCG L+ AR VF ++ ++VVSW +MIS NG+G V L+ +M G++P+
Sbjct: 1337 IDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDS 1396
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
FV VL+ C+HAGL+++ R F MT IVP +EH+ CMVD+LGR+G V EAY I+
Sbjct: 1397 IAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIK 1456
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
M + PN +WG+LLS+CR + ++ + A +L L P SG YVLLSNIYA+ GRW+D
Sbjct: 1457 QMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWED 1516
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
T+R M+ +KK PG S E
Sbjct: 1517 VTTVRSIMKTKGIKKMPGVSNFE 1539
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 262/441 (59%), Gaps = 6/441 (1%)
Query: 39 HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--I 96
HF SV G + +A ++F++ V+ +N++I Y +G E ++LF L G +
Sbjct: 164 HFWSVRGPM---AFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAV 220
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PDE T + C +GDL +G+ +H + G + V+++Y CG ++
Sbjct: 221 RPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANS 280
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF+ +S+R + MI G + G ++ LF EM ER V WN +++ ++ + EA
Sbjct: 281 VFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEA 340
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LFHEM+ + +E T+V +L C++LGA+++G W+H Y + L+ V ++G +LVD
Sbjct: 341 IALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSV-ALGTSLVD 399
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + A VF EIP +N ++W +MI GLA +G + +E +++MI G+ P++ T
Sbjct: 400 MYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEIT 459
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL+ C HAGLVE R+ F+ M + + ++HY CM+D+LGR+G + EA L+ +M
Sbjct: 460 FIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAM 519
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ P+A +WG+L +CR HG++ L E A +L+ L+P +SG YVLL+N+YAE A+
Sbjct: 520 PMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKAD 579
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R+ MR V+K PG S IE
Sbjct: 580 KVRVMMRHLGVEKVPGCSCIE 600
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 202/461 (43%), Gaps = 80/461 (17%)
Query: 18 LTQIHAHFLRHKLHQSN--------LILAHFVSVCGTLNEIKYATKIFNQMRNP--SVLL 67
L ++HAH L L S+ L+ A S + + +A I + +P S
Sbjct: 24 LLKLHAHHLVSGLLSSHSTSPFIDRLVAAFAHSDPASPRPLLHALAILASLPSPPDSAFP 83
Query: 68 FNSMIKAYSLNGPSEEPV-----KLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+N+ +A SL P + V L+ ALL + PD TF L+KAC + G
Sbjct: 84 YNAAFRALSL-CPHQHLVDRHCLPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAA 142
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
V G + + GF + + ++ G M ++FDE RDV+ N +I G+ + G
Sbjct: 143 VLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGL 202
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ L LF W L D A+R DE TV+ +
Sbjct: 203 PREALELF----------WRL--------AEDGNAVR-----------PDEVTVIGAVSG 233
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC-------------------- 281
CA++G +++G+ +H + ++ G+ R V + NA++D Y KC
Sbjct: 234 CAQMGDLELGKRLHEFVDNKGV-RCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVS 292
Query: 282 -----------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G+++ AR +F E+P ++V WNA+++G N +G+ + L+ +M V
Sbjct: 293 WTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKV 352
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN+ T V +L+ C+ G +E + + H + ++ +VD+ + G +++A
Sbjct: 353 DPNEITMVNLLSACSQLGALEMGMWVHHYIDR-HKLHLSVALGTSLVDMYAKCGNIKKAI 411
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+ + ++ NA W S++ HGH + A + +I+L
Sbjct: 412 CVFNEIPVQ-NALTWTSMICGLANHGHADEAIEYFQRMIDL 451
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + RHKLH S + V + IK A +FN++ + L + SMI + +G
Sbjct: 378 VHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGH 437
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-IRSGFERFGSIRI 139
++E ++ F + +LG+ PDE TF +L AC G + G+ + + ER
Sbjct: 438 ADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYS 497
Query: 140 GVVELYTSCGQMDDGMKVFDEM 161
+++L G +D+ ++ + M
Sbjct: 498 CMIDLLGRAGHLDEAEQLVNAM 519
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 252/436 (57%), Gaps = 37/436 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG E+ +A K+F++M + ++ +NSMI YS G ++E + LF ++ G PDE T
Sbjct: 176 CG---EMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTL 232
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC +GDL +G+ V G ++ E + ++++Y CG + +VFD M +
Sbjct: 233 VSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPN 292
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+D VV+WN +I+ ++G +EA+ LF+ M
Sbjct: 293 KD-------------------------------VVTWNAIITGYAQNGASNEAIVLFNGM 321
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
R+ D T++ VL C+ +GA+D+G+W+ ++A GL V V +AL+D Y KCG
Sbjct: 322 REAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVY-VASALIDMYAKCGS 380
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG--VSPNKATFVGVL 341
LD A VF+ +P KN VSWNAMIS LAF+G+ + + L+ +M V PN TF+GVL
Sbjct: 381 LDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVL 440
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C HAGLV++ R+LF SM +VP +EHY CMVD+ R+G + EA+DLI+ M +P+
Sbjct: 441 SACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPD 500
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
+ GSLL +C+ + ++ E ++ + +E NSGNYV+ S IYA RWDD+ +R+
Sbjct: 501 EIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVL 560
Query: 462 MRENNVKKSPGQSLIE 477
MR+ V K+PG S I+
Sbjct: 561 MRQCGVSKTPGCSWID 576
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 215/425 (50%), Gaps = 45/425 (10%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+ K+L L+ ++ L QIHA L + + + N +L+ + L ++ YA+ +FNQ+
Sbjct: 32 LTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIID----LKDLAYASLVFNQL 87
Query: 61 RNPSVLLFNSMIKAYSLNGPSEE-PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
P++ FN M++ + + V+L+ LK+LG+ + +T+ L AC V L G
Sbjct: 88 TKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHG 147
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ H + ++G + + ++ +Y CG+M KVFDEM
Sbjct: 148 KIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMG----------------- 190
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+R +VSWN MIS K G EA+ LF EMR++ FE DE T+V+VL
Sbjct: 191 --------------DRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVL 236
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVS-VGNALVDFYCKCGILDTARNVFKEIPRKN 298
C LG + +G+W+ + + +V S +G+AL+D Y KCG L +AR VF +P K+
Sbjct: 237 GACGDLGDLGLGRWVEGFVLEKKM--EVNSYMGSALIDMYGKCGDLISARRVFDSMPNKD 294
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--EL 356
VV+WNA+I+G A NG + L+ M G P++ T + VL+ C+ G ++ + E
Sbjct: 295 VVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVET 354
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
AS GL ++ ++D+ + G + +A + SM + N W +++S+ HG
Sbjct: 355 HASEKGLQH---DVYVASALIDMYAKCGSLDDAVRVFESMPHK-NEVSWNAMISALAFHG 410
Query: 417 HVELA 421
+ A
Sbjct: 411 QAQEA 415
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 31/278 (11%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+ L K+ ++ + + + + G ++ A ++F+ M N V+ +N++I Y+ NG
Sbjct: 251 VEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGA 310
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
S E + LF ++ G PD T +L AC +G L +G+ V G + +
Sbjct: 311 SNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASA 370
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG +DD ++VF+ M H++ + N MI G + L LFR M +
Sbjct: 371 LIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSK------ 424
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAE 259
+ + ++ T + VL C G VD G Q S
Sbjct: 425 -----------------------DNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNL 461
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
S GL KV + +VD + G+L A ++ K++P K
Sbjct: 462 SFGLVPKVEHY-SCMVDLCARAGLLYEAWDLIKKMPGK 498
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 277/475 (58%), Gaps = 39/475 (8%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLNE---IKYATKIFNQMRNP-S 64
+G ++ T L QIHA +R+ + S+ L H + +L + YA K+F+++ P +
Sbjct: 25 YGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V ++N++I+ Y+ G S V L+ ++ G + PD +T+ LLKA + D+R+G+ +H
Sbjct: 85 VFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIH 144
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+IRSGF ++ ++ LY +CG + KVFD+M +D++ N +I+GF + G
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENG--- 201
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ EAL L+ EM + + D T+V++L CA
Sbjct: 202 ----------------------------KPEEALALYTEMDLKGIKPDGFTIVSLLSACA 233
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
++GA+ +G+ H Y GL R + S N L+D Y +CG ++ A+ +F E+ KN VSW
Sbjct: 234 KIGALTLGKRFHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 304 AMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
++I GLA NG G+ +EL++ M +K G+ P + TFVG+L C+H G+V++ E F M+
Sbjct: 293 SLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSE 352
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EH+GCMVD+L R+G V++AY+ I M ++PN IW +LL +C HG +LAE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +++ LEP +SG+YVLLSN+YA RW D + +R M + V+K PG SL+E
Sbjct: 413 LARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVE 467
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/490 (35%), Positives = 267/490 (54%), Gaps = 53/490 (10%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
L L+ + L QIHA LR L S LI A +S +L+ YA ++F+Q+
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLD---YAQQVFDQI 95
Query: 61 RNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+P++ +N++I+AY S + P + + +L +PD++TF L+KA + +L G
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ HG +I+ + +G DV + N +IH + K
Sbjct: 156 KAFHGMVIK--------VLLG-----------------------SDVFILNSLIHFYAKC 184
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G++ G +F R VVSWN MI++ + G EAL LF EM Q + + T+V VL
Sbjct: 185 GELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVL 244
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+ + G+W+HSY E + + + ++ NA++D Y KCG ++ A+ +F ++P K++
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIXESL-TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDI 303
Query: 300 VSWNAMI------------SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
VSW M+ GLA +G G+ + L+ +M V PN TF +L C+H
Sbjct: 304 VSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHV 363
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLVE+ R F M ++ ++P ++HY CMVD+LGR+G + EA +LI M + P A++WG+
Sbjct: 364 GLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGA 423
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL +C H +V LAE A +LI LEP N G YVLLSNIYA+ G+WD LR MR+ +
Sbjct: 424 LLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGL 483
Query: 468 KKSPGQSLIE 477
KK PG S IE
Sbjct: 484 KKEPGCSSIE 493
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 267/463 (57%), Gaps = 11/463 (2%)
Query: 20 QIHAH-----FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
Q+H+H FL ++LI H + CG ++ A IF++M V+ +NS+I
Sbjct: 431 QMHSHVIKLGFLLDIFVSNSLI--HLYAACG---DLVCARSIFDEMLVKDVVSWNSLIGG 485
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS +E + LF L++ + D+ T ++ AC +GD + C+ I R+ E
Sbjct: 486 YSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVD 545
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +++ Y GQ+ KVF +M ++ + N MIH + K G++ +F ++
Sbjct: 546 VYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPN 605
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ ++SW+ MI + ++ S++L LF +M+ + D + +VL CA LGA+D+G+WI
Sbjct: 606 KDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWI 665
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H Y + + + + N+L+D + KCG + A VF E+ K+ +SWN++I GLA NG
Sbjct: 666 HDYVRRNNIKTDTI-MENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGF 724
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ + ++ M+ +G PN+ TF+GVL CA+ LV++ + F M +H++ P ++HYG
Sbjct: 725 EDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYG 784
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
C+V +L R+G + +A + I M + P+ +W LL +C+THG+V +AE A K+L L+P
Sbjct: 785 CVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPS 844
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NSG+Y+LLSNIYA RW DA +R WM + V+KSP S+++
Sbjct: 845 NSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 185/317 (58%), Gaps = 2/317 (0%)
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M ++V+ N++I GF G+++ LF +M R+VVSW +I ++ +EA+ LF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M E TV+AV+P + LG + +G+ +H Y G+ VGN+L+D Y K
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDA-RVGNSLIDLYAK 119
Query: 281 CGILDTARNVFKE-IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G + + VF E + R+N+VSW ++ISG A +G +EL+ +M G+ PN+ TF+
Sbjct: 120 IGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLS 179
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
V+ C+H GLVE+ F SM ++I P ++H+GC++D+LGR+G + EA +I + +
Sbjct: 180 VINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVE 239
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
N +W LL C +G VE+ + A+K + +LE + G++ +LSN+ E GR+ DAE R
Sbjct: 240 VNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQAR 299
Query: 460 MWMRENNVKKSPGQSLI 476
+ E + K PG +L+
Sbjct: 300 KLLDERKIVKVPGLALV 316
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 199/454 (43%), Gaps = 73/454 (16%)
Query: 2 ERKILRL--LHGRNTRTHL-----TQIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYA 53
ERKI+++ L TR+ + ++HAH + LH ++ + S +++ +A
Sbjct: 304 ERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFA 363
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
K+F Q+ +P+ L+N++++ + + ++ + + + G+ PD TF +LKAC
Sbjct: 364 HKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKT 423
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ G+ +H +I+ GF + ++ LY +CG + +FDEM +DV+ N +I
Sbjct: 424 YAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLI 483
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ ++ R E L LF M+ + + D+
Sbjct: 484 GGYSQR-------------------------------NRFKEVLALFELMQAEEVQADKV 512
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD-------- 285
T+V V+ C LG + + Y E + + V +GN L+D+YC+ G L
Sbjct: 513 TMVKVISACTHLGDWSMADCMVRYIERNHIEVDVY-LGNTLIDYYCRIGQLQSAEKVFSQ 571
Query: 286 -----------------------TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+A+ +F +IP K+++SW++MI + +EL+
Sbjct: 572 MKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELF 631
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
QM V P+ VL+ CAH G ++ + + ++I + ++D+ +
Sbjct: 632 RQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIH-DYVRRNNIKTDTIMENSLIDMFAK 690
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
GC++EA + M + + W S++ +G
Sbjct: 691 CGCMQEALQVFTEMEEKDTLS-WNSIILGLANNG 723
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
EI+YA +F+QM +V+ + +I Y+ E V LF + GI P E T ++
Sbjct: 21 EIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVP 80
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
A +G + +G+ +HG ++ G + +++LY G + + +KVFDEM R
Sbjct: 81 AISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDR---- 136
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
RNL VSW +IS G EAL LF EMR
Sbjct: 137 RNL--------------------------VSWTSIISGFAMHGLSVEALELFAEMRRAGI 170
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ T ++V+ C+ G V+ G + S + ++ G ++D + G L A
Sbjct: 171 RPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFG-CIIDMLGRAGRLCEA 229
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELG 318
+ + +P + NV+ W ++ + G E+G
Sbjct: 230 EQIIEGLPVEVNVIVWRILLGCCSKYGEVEMG 261
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 266/472 (56%), Gaps = 41/472 (8%)
Query: 12 RNTRT-HLTQIHAHFLRHKLHQSNLILAHFV-SVCGTLN-EIKYATKIFNQMRNPSVLLF 68
R TR L I AH +R L Q + + + S TL+ + YA +IF+ +P++ ++
Sbjct: 16 RCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMW 75
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
N++I+ YS+ S+ P+ AL +++ GI P+ YTF +LKAC + L GQ +H +
Sbjct: 76 NTIIRGYSI---SDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQ 132
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I++ G + + G+++LY +CG MD +FDEM D + M+ G+ + G +
Sbjct: 133 IVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEA 192
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
L LFREM+ +V S D T+ +V+ +C L
Sbjct: 193 LKLFREMQAENVSS-------------------------------DAFTLASVVGVCGDL 221
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+G+W+HSY + G+ VV +G ALV Y KCG LD A VF+ + ++V +W+ M
Sbjct: 222 GALDLGKWVHSYMDKEGVKIDVV-LGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTM 280
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I+G A +G GE ++L++ M PN TF VL+ C+H+GLVEK ++F +M +
Sbjct: 281 IAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYK 340
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P ++HYGCMVD+ R+G V A+ I++M I PN +W +LL +C+THG+ +L EH
Sbjct: 341 ITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHIS 400
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++++ L+P + NYVL+SN+YA GRW +R M++ KK G S IE
Sbjct: 401 RKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIE 452
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%), Gaps = 17/246 (6%)
Query: 230 LDEATVVAVLPICARLG---AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
LD+ ++VA + C R+G A+ + + + L K++ + G +
Sbjct: 5 LDQGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLS-----GHVAY 59
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A +F N+ WN +I G + + + LY M G+SPN TF VL C
Sbjct: 60 AHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCK 119
Query: 347 AGLVEKARELFASM--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+ + +EL + + GL P + ++ + GC+ A + M P++A
Sbjct: 120 LLRLCEGQELHSQIVKVGLDFETPLVNG---LIKLYAACGCMDYACVMFDEMP-EPDSAS 175
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG--GRWDDAETLRMWM 462
W +++S +G A +E+ E +S + L S + G G D + + +M
Sbjct: 176 WSTMVSGYAQNGQAVEALKLFREM-QAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM 234
Query: 463 RENNVK 468
+ VK
Sbjct: 235 DKEGVK 240
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 262/477 (54%), Gaps = 40/477 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLR----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
++ L N T + IH H L+ L SN ++ H ++CG L +A K+F+ M
Sbjct: 30 VVALTTNINASTISSSIHVHALKLGFESYLFVSNALI-HMYAMCGQLG---FAQKMFDGM 85
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ ++ +N++I YS +E ++LF + I D T ++ AC +GD
Sbjct: 86 LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFAD 145
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+ I + E DV + N +I + + G
Sbjct: 146 SMVKYIKENNLEI-------------------------------DVYLGNTLIDMYGRLG 174
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
++ LF M +R V+SW MI+ ++ + S+A++LF EM + D+ TV +VL
Sbjct: 175 NLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLS 234
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LG +D+G +H Y G+ + + VGN+L+D YCKCG+++ A VF + K+ V
Sbjct: 235 ACAHLGKLDVGWAVHHYIRRHGV-QADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSV 293
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW ++ISGLA NG ++L+ QM+ +GV P TFVG+L CAHAGLV K E F SM
Sbjct: 294 SWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESM 353
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+H +VP ++HYGC+VD+L RSG + +AY+ I+ M I P+ +W LLS+C+ HG+V L
Sbjct: 354 ESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVL 413
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE A K L+ L+P +SGNYVLLSN YA RWDDA +R M +++V+K G S IE
Sbjct: 414 AEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIE 470
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 3/178 (1%)
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
A V+ + + A I IH +A G + + V NAL+ Y CG L A+ +F
Sbjct: 25 APAALVVALTTNINASTISSSIHVHALKLG-FESYLFVSNALIHMYAMCGQLGFAQKMFD 83
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ +++VSWN +I G + + + + L++ M A + + T V ++ C+H G E
Sbjct: 84 GMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEF 143
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
A + + +++ ++ ++D+ GR G + A L +M R + W S+++
Sbjct: 144 ADSMVKYIKE-NNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKR-DVISWTSMIT 199
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 270/467 (57%), Gaps = 3/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSM 71
T L +IH+ ++ L + + ++ C + +I YA +F Q++NP++ +N++
Sbjct: 33 TTMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNTI 92
Query: 72 IKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
I+ +S + + + L+ +L + P T+ + KA + G +HG++I+ G
Sbjct: 93 IRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLG 152
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
E IR ++ +Y +CG + KVFD D++ N MI G K G VD+ LF
Sbjct: 153 LENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFD 212
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M R+ VSWN MIS ++GR +AL LF +M+ + E E T+V++L CA LGA+
Sbjct: 213 KMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQ 272
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+WIH Y + V A++D Y KCG +D A VF+ PR+ + WN+MI GLA
Sbjct: 273 GEWIHDYMVKKKFELNPIVV-TAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLA 331
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG+ ++L+ + + + P+ +F+ VLT C H G+V+KA++ F M + I P +
Sbjct: 332 MNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGI 391
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+H+ CMVDVLGR+G + EA +LIRSM + P+A IWGSLL SC +G++++A+ A LI
Sbjct: 392 KHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIE 451
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L P S ++VL++N YA +++A R+ ++EN++ K PG S IE
Sbjct: 452 LNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIE 498
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 279/533 (52%), Gaps = 72/533 (13%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+THL QI+A L L ++A V+ + E+ A K+F++ +P V L+N++++
Sbjct: 88 KTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRC 147
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS +G ++++A ++ + PD ++F +LKAC + L +G+ VHG+I R GFE
Sbjct: 148 YSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESD 207
Query: 135 GSIRIGVVELYTSCG-------------------------------QMDDGMKVFDEMSH 163
++ G+V LY CG Q + +++F EM
Sbjct: 208 VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRK 267
Query: 164 RDV---------IVRNLM----------IHG--------------------FCKKGDVDK 184
+V ++R IHG + K G V
Sbjct: 268 TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMV 327
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
F ++ S++ WN MIS K+G EA+ LF M+ + D TV + + CA+
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+G++++ +W+ Y S +R V V +L+D Y KCG +D AR VF IP K+VV W+A
Sbjct: 388 IGSLELARWMDEYISMSE-FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSA 446
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
M+ G +G+G + L+ M GVSPN TFVG+LT C ++GLVE+ +LF M +
Sbjct: 447 MMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-Y 505
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +HY C+VD+LGR+G + AY+ + +M I P ++WG+LLS+C+ H HV L E+A
Sbjct: 506 GIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYA 565
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L +L+P+N+G+YV LSN+YA WD +R+ MRE + K G S+IE
Sbjct: 566 AERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIE 618
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 257/439 (58%), Gaps = 15/439 (3%)
Query: 47 LNEIKYATKIFNQMR----NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
LN +K ++ M P+ L+ + M+ Y+ +G + V +F +G D +T
Sbjct: 83 LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVF---NGIG---DYFT 136
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
F +LK+ + + + +G+CVHG I+R G + + ++ LY CG+++D KVFD M+
Sbjct: 137 FPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMT 196
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
RDV N ++ G+ K G +D L +F M R++VSW MIS +SG +AL LF E
Sbjct: 197 IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDE 256
Query: 223 M--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M D + T+++VLP CA+L ++ G+ IH A GL SV AL Y K
Sbjct: 257 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNA-SVLIALTAMYAK 315
Query: 281 CGILDTARNVFKEIPR--KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
CG L ARN F ++ R KN+++WN MI+ A G G V + +MI G+ P+ TF
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
G+L+ C+H+GLV+ + F M+ +SI P +EHY C+ D+LGR+G + EA L+ M +
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 435
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+IWGSLL++CR H ++E+AE A ++L LEP N+GNYVLLSN+YAE GRW + + L
Sbjct: 436 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 495
Query: 459 RMWMRENNVKKSPGQSLIE 477
R ++ KKSPG S IE
Sbjct: 496 RAIVKSQGTKKSPGCSWIE 514
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 101/242 (41%), Gaps = 39/242 (16%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-------------------- 60
+H LR L + + + G EI A K+F+ M
Sbjct: 156 VHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGC 215
Query: 61 ---------RNP--SVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYTFAPLL 107
R P +++ + +MI YS +G +++ + LF + ++ G+ P+ T +L
Sbjct: 216 IDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVL 275
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM--SHRD 165
AC + L G+ +H R G S+ I + +Y CG + D FD++ + ++
Sbjct: 276 PACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKN 335
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFH 221
+I N MI + G + + FREM + + +++ ++S SG L+ F+
Sbjct: 336 LIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFN 395
Query: 222 EM 223
M
Sbjct: 396 HM 397
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 256/436 (58%), Gaps = 14/436 (3%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F +++PS +L+N MI+A++ + + ++ F + PD +T++ LL AC
Sbjct: 82 VFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTSSLS 141
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSC-----GQMDDGMKVFDEMSHRDVIVR 169
LR GQ VH +++ +G+ + +V Y + + KVFD+MS R+V+
Sbjct: 142 LREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVCW 201
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N M+ G+ ++G++D +F EM ER+VVSW MIS K+G+ +AL LF +MR E
Sbjct: 202 NSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVE 261
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---YRKVVSVGNALVDFYCKCGILDT 286
LD+ ++A L CA LG + +G WIHSY + + + R +VS+ NAL+ Y CG++D
Sbjct: 262 LDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMIDE 321
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS---PNKATFVGVLTC 343
A VF+ +P ++ VSW ++I+ A G + +E++ M G S P+ TF+GVL
Sbjct: 322 AYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEARPDGITFIGVLCA 381
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLV++ R+LF M I P +EHYGCMVD+L R+G + EA +LI +M ++PN A
Sbjct: 382 CSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQELIATMPVKPNNA 441
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELI-NLEPWNSGNYV-LLSNIYAEGGRWDDAETLRMW 461
+WG+LL CR + + ELA ++L+ +P + Y+ LL+ +YA +W D T+R
Sbjct: 442 VWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYASAEKWQDVATVRQK 501
Query: 462 MRENNVKKSPGQSLIE 477
M VKK GQS ++
Sbjct: 502 MVAMGVKKPAGQSWVQ 517
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 44/274 (16%)
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
Y+F++++ S + WN MI + +S +++++ F++M D T +L C
Sbjct: 81 YVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAACTSSL 140
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC------------------------- 281
++ GQ +HS ++G Y V + + LV+FY
Sbjct: 141 SLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVC 200
Query: 282 -----------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G LD AR +F E+P +NVVSW MISG A NG+ + + L++QM GV
Sbjct: 201 WNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGV 260
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGL-----HSIVPNLEHYGCMVDVLGRSGC 385
++ + LT CA G ++ + + + ++ +L + ++ + G
Sbjct: 261 ELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNN--ALIHMYASCGM 318
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ EAY++ R M R +A W SL+++ G+ +
Sbjct: 319 IDEAYEVFRWMPER-SAVSWTSLITAFAKQGYAQ 351
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 75/370 (20%)
Query: 20 QIHAHFLRHKLHQSNLILA------HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS--- 70
Q+H+ L + + SN+ L + V G + A K+F+ M +V+ +NS
Sbjct: 147 QVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKVFDDMSERNVVCWNSMLA 206
Query: 71 ----------------------------MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
MI Y+ NG ++ + LF ++ G+ D+
Sbjct: 207 GYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQALNLFDQMRKAGVELDQVV 266
Query: 103 FAPLLKACLGVGDLRVGQCVHGEI----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
L AC +GDL++G +H I + S S+ ++ +Y SCG +D+ +VF
Sbjct: 267 LLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNALIHMYASCGMIDEAYEVF 326
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
M R + +I F K+G L +FR M+ LG S
Sbjct: 327 RWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQR------------LGTS-------- 366
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDF 277
E R D T + VL C+ G VD G Q + G+ ++ G +VD
Sbjct: 367 ---EARP-----DGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYG-CMVDL 417
Query: 278 YCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+ G LD A+ + +P K N W A++ G F EL + ++++A+ P+KA
Sbjct: 418 LSRAGFLDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEP-DPDKAA 476
Query: 337 FVGVLTCCAH 346
G L+ A
Sbjct: 477 --GYLSLLAQ 484
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 15/193 (7%)
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L +A VFK+I + + WN MI A + ++ + QM+ P+ T+ +L
Sbjct: 76 LLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDSRPDAHTYSFLLAA 135
Query: 344 CAHAGLVEKARELFASM--TGLHS----IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
C + + + +++ + + G +S ++ L ++ V V G + A + MS
Sbjct: 136 CTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAV-VGGEGAALASARKVFDDMS 194
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDA 455
R N W S+L+ G+++ A E+ N+ W + ++S YA+ G+ A
Sbjct: 195 ER-NVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTT----MISG-YAKNGKCKQA 248
Query: 456 ETLRMWMRENNVK 468
L MR+ V+
Sbjct: 249 LNLFDQMRKAGVE 261
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 279/476 (58%), Gaps = 5/476 (1%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNP 63
LRL+ + +T L QIHA ++ L + + ++ C + +++ YA +F ++ +
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK 87
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ ++N++I+ +S + E + +F L + + P T+ + KA +G R G+
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG +I+ G E IR ++ +Y +CG + + ++F M DV+ N MI GF K G
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+D+ LF EM +R+ VSWN MIS ++GR +AL +F EM+++ + D T+V++L
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA + G+WIH Y + + V AL+D YCKCG ++ NVF+ P+K +
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MI GLA NG E ++L+ ++ G+ P+ +F+GVLT CAH+G V +A E F M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I P+++HY MV+VLG +G + EA LI++M + + IW SLLS+CR G+VE+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ A K L L+P + YVLLSN YA G +++A R+ M+E ++K G S IE
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 238/387 (61%), Gaps = 1/387 (0%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+K + PD+ A +L C +LR G+ +H ++ S + ++ +Y SC
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCAD 60
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
M+ K+++ +S +++++ M++G+ K G V+ +F M + VVSW+ MI+ +S
Sbjct: 61 MEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAES 120
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
+ EAL LFH+M+ + DE T+++V+ CA +GA++ + IHS+ E+ + K++ +
Sbjct: 121 SKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMC-KILPI 179
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
GNAL+D + KCG L A +VF +P+KNVV+W ++I+ A +G G + L+E M ++G+
Sbjct: 180 GNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGI 239
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN TF+G+L C HAGLVE+ R LF M + I P EHYGCMVD+LGR+ + +A
Sbjct: 240 QPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAA 299
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
DLI+SM +RPN IWGSLL++CR HG +EL A K+++ L+P + G VLLSNIYAE G
Sbjct: 300 DLIQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYG 359
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
W+D + +R M K G S +E
Sbjct: 360 NWNDVKEVRGVMEVQGTWKKKGCSWME 386
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 32/272 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+++ A IFN M V+ +++MI Y+ + E + LF ++ G+ PDE T ++
Sbjct: 91 KVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVIS 150
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC VG L +C+H + + I ++++++ CG + + VF+ M ++V+
Sbjct: 151 ACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVT 210
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+I GD G+S AL LF M+ +
Sbjct: 211 WTSIITASAMHGD--------------------------GRS-----ALTLFENMKSEGI 239
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ + T + +L C G V+ G+ + + +VD + +L A
Sbjct: 240 QPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAA 299
Query: 289 NVFKEIP-RKNVVSWNAMISGLAFNGRGELGV 319
++ + + R NVV W ++++ +G ELG
Sbjct: 300 DLIQSMHLRPNVVIWGSLLAACRMHGDLELGT 331
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG+L A +FN M +V+ + S+I A +++G + LF +K+ GI
Sbjct: 183 LIDMFSKCGSLT---LALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGI 239
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQ 120
P+ TF LL AC G + G+
Sbjct: 240 QPNGVTFLGLLYACCHAGLVEEGR 263
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 264/483 (54%), Gaps = 44/483 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRN-PSVLLFNSMIKAYSLNGPSEEPVKLF--AL 90
N+I F+ V + ++++ IFN + P++ +N+++KA+S + + F L
Sbjct: 58 NIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQL 117
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ PDEYTF +LKAC G+ + GQ VH + + G E +R +V+LY G
Sbjct: 118 VLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGC 177
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
K+FDEM RDV+ N +I G+C G VDK +F M E+++VSW+ MIS +
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARV 237
Query: 211 GRDSEALRLFHEM--------------------RDQAFEL------------DEATVVAV 238
G EA +LF M A EL ++ T+V+V
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297
Query: 239 LPICARLGAVDIGQWIHSYAESS----GLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
L CA LGA+D+G+WIH + + GL+ +GNAL D Y KCG + A+ VF E+
Sbjct: 298 LSACAHLGALDLGKWIHRFIRRNKIEVGLF-----LGNALADMYAKCGCVLEAKGVFHEM 352
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
++V+SW+ +I GLA G + +MI G+ PN +F+G+LT C HAGLV+K
Sbjct: 353 HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGL 412
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
E F M ++ I P +EHYGC+VD+L R+G + +A LI SM ++PN +WG+LL CR
Sbjct: 413 EYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRI 472
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+ E E V ++ L+ +SG+ V L+N+YA GR DDA + R+ MR+N K+PG S
Sbjct: 473 YKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCS 532
Query: 475 LIE 477
IE
Sbjct: 533 WIE 535
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/414 (39%), Positives = 243/414 (58%), Gaps = 2/414 (0%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+V+ + +I YS G + E V F + + GI PDE T LL AC + DL G+ +H
Sbjct: 201 NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLH 260
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-RDVIVRNLMIHGFCKKGDV 182
+ G G + + ++++Y CG + +VFD + R N MI G+CK G V
Sbjct: 261 KLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHV 320
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
D YLF +M +R +V++N +I+ GR EAL LF +MR D T+V++L C
Sbjct: 321 DVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTAC 380
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A LGA+ G+ +H+ E L + +G AL+D Y KCG ++ A VF+ + ++V +W
Sbjct: 381 ASLGALPQGRALHACIEQR-LVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTW 439
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI+GLAFNG G+ +E + M G PN T++ +LT C+H+ L+++ R F M
Sbjct: 440 SAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRL 499
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
LH+I P +EHYGCM+D+LGRSG + EA DL+R+M ++PNA IW S+LS+CR H LA
Sbjct: 500 LHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLAR 559
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+A + L+ LEP YV L NIY + +W+DA +R M E VKK+ G S I
Sbjct: 560 NAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSI 613
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 190/402 (47%), Gaps = 39/402 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKA-YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++YA +F++M S LF++ ++A + + E P+ L+ ++ G+ D +TF L K
Sbjct: 53 LRYALCLFDRMPC-STFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFK 111
Query: 109 ACL-GVGDLRVGQCVHGEIIRSGFER-FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
C G + + Q +H R+ + ++ +Y G D + FD++ +D
Sbjct: 112 CCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDA 171
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ +I G K G +D L R R+V+SW +IS ++GR +EA+ F+ M
Sbjct: 172 VAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSD 231
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG-------------LYRKVVSVG-- 271
E DE TV+ +L CA+L + G+ +H G +Y K +G
Sbjct: 232 GIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRA 291
Query: 272 ----------------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
NA++D YCK G +D AR +F ++ +++V++N++I+G GR
Sbjct: 292 WEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRL 351
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG- 374
+ L+ QM + + T V +LT CA G + + R L A + +V + G
Sbjct: 352 REALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIE--QRLVEVDIYLGT 409
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
++D+ + G V EA + ++MS+R + W ++++ +G
Sbjct: 410 ALLDMYLKCGRVEEASLVFQAMSVR-DVHTWSAMIAGLAFNG 450
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L + A +F+QM + ++ FNS+I Y G E + LF ++ + D +T L
Sbjct: 317 LGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSL 376
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC +G L G+ +H I + E + ++++Y CG++++ VF MS RD
Sbjct: 377 LTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRD- 435
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
V +W+ MI+ L +G AL F M+
Sbjct: 436 ------------------------------VHTWSAMIAGLAFNGMGKAALEYFFWMKVD 465
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
F+ + T +A+L C+ +D G+ R ++ ++D + G+LD
Sbjct: 466 GFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDE 525
Query: 287 ARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
A ++ + +P + N V W +++S + L E ++
Sbjct: 526 AMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLL 566
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 258/441 (58%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H + G+L + + + F++M + +V+ +NSMI Y+ G + E LF ++ G+
Sbjct: 151 LLHSYASAGSLGDSR---RFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGL 207
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
DE+T LL AC G+L G+ VH ++ G + +V++Y CG +
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHT 267
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
FD M ++ + M+ K+ +D F ++ E+S++SWN MIS + GR EA
Sbjct: 268 CFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEA 327
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L++ M+ DE T+ AVL C +LG + G+ IH + + V++ N+L+D
Sbjct: 328 LDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDN-FHNPGVALFNSLLD 386
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y +CG +DTA ++F E+P KNV+SWNA+I LA +GR + + + M++ P++ T
Sbjct: 387 MYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEIT 446
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FV +L+ C H GL+E + F +M ++++ P +EHY CMVD+LGR G + +A DLI+ M
Sbjct: 447 FVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDM 506
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+RP+ +WG+LL +CR HGH+++ + +K+L+ LE + G +VL+SN+ E +W+D +
Sbjct: 507 PMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMK 566
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR MRE +KK+ G S IE
Sbjct: 567 RLRKLMREWGMKKNMGVSSIE 587
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 227/505 (44%), Gaps = 73/505 (14%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQ-SNLILAHFVSVCGTLNEIKYATKIFNQMR 61
R + LL + L Q+HAH + H + ++ ILA + ++ + YA ++F+++
Sbjct: 13 RHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAG-GGVWYARQLFDRIP 71
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P ++NS+I+AY + +E + L + GI P+E+T LLKAC V
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMV 131
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
HG +++ GF GQ V V N ++H + G
Sbjct: 132 THGVVVKLGF----------------VGQ---------------VFVGNALLHSYASAGS 160
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ F EM +R+VVSWN MI+ ++G EA LF MR Q DE T+V++L
Sbjct: 161 LGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFA 220
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL----------------- 284
C+ G ++ G+ +HS+ G ++ + NALVD Y KCG L
Sbjct: 221 CSAEGNLEFGKLVHSHLLVRGCRIDLI-LANALVDMYGKCGDLLMAHTCFDMMPFKNAVS 279
Query: 285 --------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
D AR+ F++IP K+++SWNAMIS GR ++LY +M G+
Sbjct: 280 WTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGL 339
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
+P++ T VL+ C G + + + + H+ P + + ++D+ R G V A
Sbjct: 340 APDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHN--PGVALFNSLLDMYARCGQVDTA 397
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI-NLEPWNSGNYVLLSNIYAE 448
L M + N W +++ + HG + A + ++ + P + +V L +
Sbjct: 398 ISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNH 456
Query: 449 GGRWDDAETLRMWMRE-NNVKKSPG 472
GG + + MR NVK PG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVK--PG 479
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 247/410 (60%), Gaps = 10/410 (2%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N++I AYS NG + K+F + D ++ + A + G+L + + E+
Sbjct: 44 NALIDAYSKNGGFSDARKVFDEMPE----RDVVSWNTAMAAMVREGELAGVRKLFDEMPE 99
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ +I G YT G+++ ++F M R+V+ + M+ G+CKKGD++ +
Sbjct: 100 KDTVSWNTILDG----YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVI 155
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M +++V+W +M+S+ + G EA +LF +M++ + ELD A VV++L CA G++
Sbjct: 156 FDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSL 215
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMIS 307
+G+ IH Y L R V NAL+D +CKCG ++ A VF E +K+ VSWN++I
Sbjct: 216 SLGKRIHRYVRKRNLGRST-HVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIG 274
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G G+ +EL+ QM +G +P+ T + VL+ C H G V++ R F++M + I+
Sbjct: 275 GFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIM 334
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCM+D+LGR G ++EA DLI+SM PN IWGSLLS+CR H +VE AE AV E
Sbjct: 335 PQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNE 394
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L L+P N+GNY +LSNIYAE G+W D RM M+ +K+ G S +E
Sbjct: 395 LSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVE 444
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 39/296 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYT---- 102
E+ K+F++M + +N+++ Y+ G E +LF + +N+ W +
Sbjct: 86 ELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCK 145
Query: 103 ----------FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL-------- 144
F + L + V C ++ + F ++ VEL
Sbjct: 146 KGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSI 205
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNL---------MIHGFCKKGDVDKGLYLF-REMRE 194
+C + G + HR V RNL +I FCK G V++ Y+F E +
Sbjct: 206 LAACAE--SGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ 263
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VSWN +I G +AL LF +M+ Q F D T++ VL C +G VD G+
Sbjct: 264 KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRH 323
Query: 255 HSYAESS-GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISG 308
S E G+ ++ G ++D + G++ A ++ K +P N V W +++S
Sbjct: 324 FSNMERDYGIMPQIEHYG-CMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSA 378
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 267/471 (56%), Gaps = 9/471 (1%)
Query: 11 GRNTRTHLTQIHAHFLR----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
R + T +HA L+ L SN ++ + C E+ +A K+F++M ++
Sbjct: 807 ARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFC----ELGFARKVFDEMSERDLV 862
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+NS+I Y E + +F ++ + D T ++ AC +G+ V + I
Sbjct: 863 SWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYI 922
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
+ E + ++++Y +D +VFD M R+++ N MI G+ K G++
Sbjct: 923 EENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAAR 982
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
LF +M R V+SW MISS ++G+ +A+RLF EM + DE TV +VL CA +G
Sbjct: 983 KLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIG 1042
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A+D+G+ +H Y + + VGNAL+D YCKCG ++ +VF+E+ +++ VSW ++I
Sbjct: 1043 ALDVGEAVHEYIRKYDVNADIY-VGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVI 1101
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+GLA NG + + L+ M+ +GV P TFVGVL CAHAG+V+K E F SM ++ +
Sbjct: 1102 AGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGL 1161
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P ++HYGC+VD+L RSG + AY+ I+ M + P+ +W LLS+ + HG++ LAE A K
Sbjct: 1162 TPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATK 1221
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L+ +P NSGNY+L SN YA RW+D +R M E+NV K S +E
Sbjct: 1222 KLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVE 1272
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 183/419 (43%), Gaps = 70/419 (16%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
NL+ ++ +S L A ++F Q+ P++ +N MI+ +S E ++ + L+ +
Sbjct: 734 NLLKSYALSPTNILK----ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYS 789
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
++ + T+ LLKAC + ++ VH +++ GF+ + ++ Y ++
Sbjct: 790 QALFGNNLTYPFLLKACARISNVSC-TTVHARVLKLGFDSDLFVSNALIHGYAGFCELGF 848
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
KVFDEMS RD++ N +I G+ G+ R
Sbjct: 849 ARKVFDEMSERDLVSWNSLICGY-------------------------------GRCRRY 877
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
SE L +F EMR + D T+V V+ C LG + + Y E + + V +GN
Sbjct: 878 SEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVY-LGNT 936
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL------------------------ 309
L+D Y + ++D AR VF + +N+VSWNAMI G
Sbjct: 937 LIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISW 996
Query: 310 -----AFNGRGELG--VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+++ G+ G V L+++M+ V P++ T VL+ CAH G ++ E
Sbjct: 997 TSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVG-EAVHEYIR 1055
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + ++ ++D+ + G V + + M R + + W S+++ +G + A
Sbjct: 1056 KYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVS-WTSVIAGLAVNGSADSA 1113
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 114/272 (41%), Gaps = 33/272 (12%)
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LFR++ ++ WN+MI ++ + EA+R ++ M QA + T +L CAR+
Sbjct: 752 LFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISN 811
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
V +H+ G + + V NAL+ Y L AR VF E+ +++VSWN++I
Sbjct: 812 VSCTT-VHARVLKLG-FDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLIC 869
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG-------LVEKARE----- 355
G R + ++E+M V + T V V+ C G ++E E
Sbjct: 870 GYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEV 929
Query: 356 ------LFASMTGLHSIVP------------NLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
M G S+V N+ + M+ G++G + A L M
Sbjct: 930 DVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP 989
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
R + W S++SS G A +E++
Sbjct: 990 HR-DVISWTSMISSYSQAGQFGKAVRLFQEMM 1020
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 256/432 (59%), Gaps = 1/432 (0%)
Query: 46 TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
++ E A K+F++ ++ +NS+I Y E + ++ + + PDE T
Sbjct: 201 SVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIG 260
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
++ AC + L++G+ +H I SG S+ ++++Y CG ++ G +FD M +
Sbjct: 261 VVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKT 320
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V+ MI G+ K G +D LF +M E++VV+WN MI S ++ EAL LF EM+
Sbjct: 321 VVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQW 380
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ D+ T++ L C++LGA+D G W H+Y + L V ++G AL+D Y KCG +
Sbjct: 381 SNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDV-ALGTALIDMYAKCGNMT 439
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A VF E+PR+N ++W A+I GLA G + + +MI G+ P++ TF+GVLT C
Sbjct: 440 KALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACC 499
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H GLVE+ R+ F M ++ P +HY CMV++LGR+G + EA +LI++M + +A +W
Sbjct: 500 HGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVW 559
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
G+L +C H ++ + E A +L++L+P +SG YVLL+N+Y E G+W++A+ +R M E
Sbjct: 560 GALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMER 619
Query: 466 NVKKSPGQSLIE 477
V+K+PG S IE
Sbjct: 620 GVEKTPGSSSIE 631
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 205/467 (43%), Gaps = 74/467 (15%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFN 58
+ +L LL + + L QI A + L + +S C + Y KI N
Sbjct: 52 LSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILN 111
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVG 114
++NP+V +N++I+ SE P K L K + G PD YT++ L K C +
Sbjct: 112 NLQNPNVFSWNAVIRGCV---ESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLV 168
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+G + G++++ GF++ + G++ + S G+ KVFDE RD+
Sbjct: 169 LSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDL-------- 220
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
VSWN +I+ + + EA+ ++ +M + + DE T
Sbjct: 221 -----------------------VSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVT 257
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC------------- 281
++ V+ CA+L ++ +G+ IH Y E SGL K +S+ NAL+D Y KC
Sbjct: 258 MIGVVSACAQLESLKLGREIHRYIEESGLNLK-ISLVNALMDMYVKCGDLEAGKVLFDNM 316
Query: 282 ------------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
G+LD A +F ++P KNVV+WNAMI +EL+
Sbjct: 317 RKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFR 376
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+M + P+K T + L+ C+ G ++ + H++ ++ ++D+ +
Sbjct: 377 EMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDMYAKC 435
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
G + +A + M R N+ W +++ +G+V A ++I+
Sbjct: 436 GNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNVNDAIFYFSKMID 481
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H + +H L + + + + A ++FN+M + L + ++I +L G
Sbjct: 410 HNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNV 469
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + F+ + + G+ PDE TF +L A C HG ++ G + F ++
Sbjct: 470 NDAIFYFSKMIDSGLMPDEITFLGVLTA-----------CCHGGLVEEGRKYFDQMK 515
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 278/480 (57%), Gaps = 9/480 (1%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-P 63
++LL R + T + QIHA + H L Q+ +L + + +A +F+Q + P
Sbjct: 58 FVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLP 117
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKACLGVGDLR-VGQ 120
+++N MI+AYS S+E + LF + G D+YTF + AC LR G+
Sbjct: 118 PTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGE 177
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VHG +++ G+E + +V +Y+ +M D +VFDEM RDVI ++ G+ +G
Sbjct: 178 NVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRG 237
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM--RDQAFELDEATVVAV 238
++ + LF M R+ VSW +M++ +EAL+ F++M D+ + +EA +V++
Sbjct: 238 ELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEV-KPNEAVLVSI 296
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA LGA+D G+WIH Y + + + ++ AL+D Y KCG +D AR VF + +++
Sbjct: 297 LSACAHLGALDQGKWIHVYIDKNRILLSS-NISTALIDMYAKCGRIDCARRVFDGLHKRD 355
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+++W +MISGL+ +G G + + +M+A+G P+ T +GVL C+H+GLVE+ +F
Sbjct: 356 LLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFH 415
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M L IVP LEHYGC++D+LGR+G + A++ I+SM + P+ W +LLS+CR HG V
Sbjct: 416 DMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDV 475
Query: 419 ELAEHAVKELINLEPWN-SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L E + + L P + G YVLLSN+YA G+W+ +R M + + PG S IE
Sbjct: 476 DLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIE 535
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 249/434 (57%), Gaps = 35/434 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG++NE A +IF+ + N ++ + MI AY+ +G +E +L ++ G P+ T+
Sbjct: 177 CGSINE---ARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY 233
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC G L+ + VH + +G E
Sbjct: 234 VSILNACASEGALKWVKRVHRHALDAGLEL------------------------------ 263
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
DV V ++ + K G +D +F M+ R VVSWN+MI + + GR EA LF +M
Sbjct: 264 -DVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQM 322
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + + D +++L CA GA++ + IH +A SGL V VG ALV Y K G
Sbjct: 323 QTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDV-RVGTALVHMYSKSGS 381
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+D AR VF + +NVVSWNAMISGLA +G G+ +E++ +M A GV P++ TFV VL+
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLV++ R + +MT ++ I P++ H CMVD+LGR+G + EA I +M++ P+ A
Sbjct: 442 CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
WG+LL SCRT+G+VEL E KE + L+P N+ YVLLSNIYAE G+WD +R MR
Sbjct: 502 TWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMR 561
Query: 464 ENNVKKSPGQSLIE 477
E ++K PG+S IE
Sbjct: 562 ERGIRKEPGRSWIE 575
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 48/404 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H ++ ++ Q+ ++ + + V CG L E A +F+ + S +N+MI Y
Sbjct: 49 QVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQE---ARCVFDALVKKSGASWNAMIAGYV 105
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ +E+ ++LF + + G+ P+ T+ +LKAC + L+ G+ VH I G E
Sbjct: 106 EHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVR 165
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++ +Y CG +++ ++FD + + D+I
Sbjct: 166 VGTALLRMYGKCGSINEARRIFDNLMNHDII----------------------------- 196
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SW +MI + +SG EA RL +M + F+ + T V++L CA GA+ + +H
Sbjct: 197 --SWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR 254
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+A +GL V VG ALV Y K G +D AR VF + ++VVSWN MI A +GRG
Sbjct: 255 HALDAGLELD-VRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGH 313
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE---HY 373
+L+ QM +G P+ F+ +L CA AG +E +++ H++ LE
Sbjct: 314 EAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR-----HALDSGLEVDVRV 368
Query: 374 G-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
G +V + +SG + +A + M +R N W +++S HG
Sbjct: 369 GTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG 411
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/445 (36%), Positives = 256/445 (57%), Gaps = 8/445 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF + CG L ++ Y + N ++ +NSM+ + G ++ + LF ++N G+
Sbjct: 281 LIHFYASCGHL-DLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGV 339
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ T ++ AC +L +G+ V I R+ ++ ++++ CG+++
Sbjct: 340 HPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARG 399
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD M RDV+ +I G+ K + +F M + + +WN++IS +SGR EA
Sbjct: 400 LFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEA 459
Query: 217 LRLFHEMR--DQAFELDEATVVAVLPICARLGAVDIGQWIHSY--AESSGLYRKVVSVGN 272
L +F E++ D+ T+++ L CA+LGA+DIG+WIH Y E L R + +
Sbjct: 460 LAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLAT--- 516
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+L+D Y K G ++ A VF I K+V W+AMI+GLA +GRGE +EL+ M V P
Sbjct: 517 SLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKP 576
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N TF +L C+H+GLV++ + LF M ++ +VP +HY CMVDVLGR+G + EA
Sbjct: 577 NSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF 636
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
I M + P+A++WG+LL +C HG++ELAE A L+ +EP N G YVLLSN+YA+ G W
Sbjct: 637 IEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDW 696
Query: 453 DDAETLRMWMRENNVKKSPGQSLIE 477
+ LR MR++ +KK G S IE
Sbjct: 697 EGVSELRQQMRDSGLKKETGCSSIE 721
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 200/419 (47%), Gaps = 24/419 (5%)
Query: 17 HLTQIHAHFLR-HKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
L QIHA LR +KLH F + + + + YA K+F+Q+ P++ +N +I+A
Sbjct: 154 QLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRA 213
Query: 75 YSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
+ + + V +F +L + P+++TF L+KA VG+ VHG I++ F
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGD 273
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFD--EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ ++ Y SCG +D VF+ E +++D++ N M+ GF + G DK L LF
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC-------AR 244
MR V + + S+ + + L L ++ D +D ++ L +C +
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDY---IDRNEMMMNLNVCNATIDMFVK 390
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
G V+I + + E R VVS ++D Y K AR++F +PRK++ +WN
Sbjct: 391 CGEVEIARGLFDNMEK----RDVVS-WTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNV 445
Query: 305 MISGLAFNGRGELGVELYE--QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+ISG +GR + + ++ Q+ G P++ T + L+ CA G ++ E
Sbjct: 446 LISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-EWIHGYIK 504
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
I N ++D+ +SG V +A ++ S+ + + +W ++++ HG E A
Sbjct: 505 KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMHGRGEAA 562
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/108 (21%), Positives = 55/108 (50%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + + ++ + + + + +++ A ++F+ + N V ++++MI +++G
Sbjct: 499 IHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGR 558
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
E ++LF ++ + P+ TF LL AC G + G+ + E+ R
Sbjct: 559 GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMER 606
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 217/337 (64%), Gaps = 1/337 (0%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+V+LY +CG + D VFDEM+ RDV+ N+MI G+ K GD LF M ER+VVSW
Sbjct: 119 LVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAMPERNVVSW 178
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+I + R +A+ +F M+ + E D +++VL C LGAVD+G+W+H +
Sbjct: 179 TTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVR 238
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
GL +++ + N+++D Y KCG ++ A VF+ + K+VV+W +I+G A +G G VE
Sbjct: 239 RGLCQEI-PLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVE 297
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
++ +M + ++PN TF+ +L+ C+H GL + R F M + I P +EHYGCMVD+L
Sbjct: 298 MFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGCMVDLL 357
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+GC++EA DL+++M ++ NAAIWG+LL++ RTHG L E A+ LI LEP NSGNY+
Sbjct: 358 GRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEPNNSGNYI 417
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNI+AE RW D LR MRE ++ PG S IE
Sbjct: 418 LLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIE 454
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 135/303 (44%), Gaps = 38/303 (12%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N+++A +V + +A ++F+ M +V+ + ++I Y+ E+ V++F ++
Sbjct: 148 NVMIAGYVKA----GDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQV 203
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
GI D +L AC +G + +G+ VH ++R G + + ++++Y CG ++
Sbjct: 204 EGIEADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEK 263
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++VF+ M + SVV+W +I+ G
Sbjct: 264 AVEVFEGMEEK-------------------------------SVVTWTTLIAGFALHGLG 292
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+A+ +F M + + T +A+L C+ +G D+G+W + S + V
Sbjct: 293 LQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHYGC 352
Query: 274 LVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+VD + G L A+++ K +P K N W A+++ +G LG + +I + P
Sbjct: 353 MVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIE--LEP 410
Query: 333 NKA 335
N +
Sbjct: 411 NNS 413
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +R L Q ++ + + I+ A ++F M SV+ + ++I ++L+G
Sbjct: 232 VHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGL 291
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ V++F ++ + P+ TF +L AC VG +G+
Sbjct: 292 GLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGR 331
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 267/506 (52%), Gaps = 44/506 (8%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL---NEIKYATKIFNQMR-----NPSV 65
T L Q+H ++ L Q L V+ + + YA K F + + ++
Sbjct: 37 TLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDAL 96
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+ NS+I+ YS G E + L+ + LG+ P+ YTF +L C + G VHG
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGS 156
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI------------------ 167
+++ G E I+ ++ Y CG MD G KVF+ MS R+V+
Sbjct: 157 VVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEA 216
Query: 168 -----------VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+ N ++ + K G +D LF E +R++V +N ++S+ + G EA
Sbjct: 217 VSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 276
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARL-----GAVDIGQWIHSYAESSGLYRKVVSVG 271
L + EM Q D T+++ + A+L G V G W+H+Y E +G+ + +
Sbjct: 277 LAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDM-RLN 335
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
ALVD + +CG +A VF ++ ++V +W A I +A G GE L+ QM+ +GV
Sbjct: 336 TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 395
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P+ FV VLT C+H G VE+ +F+ M H I P +EHYGCMVD+LGR+G +REA+D
Sbjct: 396 PDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFD 454
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
LI+SM + PN +WGSLL++CR H +VE+A +A + + L P +G +VLLSNIYA G+
Sbjct: 455 LIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGK 514
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
W D +R+ +RE V+K PG S ++
Sbjct: 515 WTDVARVRLNLREKGVRKVPGSSSVQ 540
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/412 (39%), Positives = 244/412 (59%), Gaps = 33/412 (8%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
P +TF+ L+KAC V +L G+ VHG I + GF+ ++ +V+ Y + G++ + +V
Sbjct: 8 PTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRV 67
Query: 158 FDEMSHRDVI--------------------------VRNL-----MIHGFCKKGDVDKGL 186
FDEMS RDV VRN MI G+ + +V+
Sbjct: 68 FDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAE 127
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
LF +M R ++SW MI+ ++ + EAL +F+EM+ + DE T+ ++ CA LG
Sbjct: 128 LLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLG 187
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A+D+G+ IH YA G + V +G+AL+D Y KCG LD + VF ++ +KN+ WN++I
Sbjct: 188 ALDLGKEIHLYAMEMG-FDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSII 246
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
GLA +G E + ++ +M + + PN TF+ VL C HAGLVE+ R+ F SM+ SI
Sbjct: 247 EGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSI 306
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P +EHYGCMVD+LG++G + +A +L+RSM + PN+ IWG+LL C+ H ++++A+ AV
Sbjct: 307 PPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVN 366
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SPGQSLIE 477
E LEP NSG Y LL N+YAE RW + +R M+E V+K SPG S IE
Sbjct: 367 ESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIE 418
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 118/264 (44%), Gaps = 34/264 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L ++ A +F+QM N ++ + +MI YS N E + +F ++ GI PDE T A +
Sbjct: 120 LRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATI 179
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+ AC +G L +G+ +H + GF+ I ++++Y CG +D + VF ++ +++
Sbjct: 180 ISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNL 239
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
N +I G L G EAL +F M+ +
Sbjct: 240 FCWNSIIEG-------------------------------LAVHGYAEEALAMFSRMQRE 268
Query: 227 AFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ + T ++VL C G V+ G + S + + ++ G +VD K G+L+
Sbjct: 269 KIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYG-CMVDLLGKAGLLE 327
Query: 286 TARNVFKEIP-RKNVVSWNAMISG 308
A + + + N V W A++ G
Sbjct: 328 DALELVRSMRMEPNSVIWGALLGG 351
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG+L++ + +F ++R ++ +NS+I+ +++G +EE + +F+ ++ I P+ TF
Sbjct: 221 CGSLDK---SLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTF 277
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L G C H ++ G +RF S M + E+ H
Sbjct: 278 ISVL-----------GACTHAGLVEEGRKRFLS--------------MSRDFSIPPEIEH 312
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMR-ERSVVSWNLMI 204
M+ K G ++ L L R MR E + V W ++
Sbjct: 313 -----YGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALL 349
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 272/471 (57%), Gaps = 16/471 (3%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPSVLLFNSMIKA 74
L + HA L L + L+ ++ C + +A K+F Q+++P++ + N+MIKA
Sbjct: 20 QLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIKA 79
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ L G +++++ + G++PD YT +LKAC G+ +G+ HG+ ++ GF +
Sbjct: 80 FVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGF--W 137
Query: 135 GSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE- 191
I +G ++ +Y+S G + +FDEM + +MI G+ K GDV+ LF E
Sbjct: 138 FDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFDEA 197
Query: 192 -MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
M++R + W +IS ++ E L++F M+ E DEA +V++L CA LGA++I
Sbjct: 198 PMKDRGI--WGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEI 255
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G W+H Y + G + V + L+D Y KCG LD A+ +F + +++ + WNAMISG+A
Sbjct: 256 GVWVHRYLDQLG-HPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMA 314
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG G+ + L+ +M GV P+ TF+ + T C+++G+ +A L SM ++++ P
Sbjct: 315 MNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKS 374
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSM----SIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
EHYGC+VD+LGR+G ++EA +LI M S A W +LLS+C +HG E+AE A +
Sbjct: 375 EHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQ 434
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L +LE +SG YVLLSN+YA G+ D +R M V K+PG S ++
Sbjct: 435 RLFHLEH-HSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVK 484
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 264/447 (59%), Gaps = 1/447 (0%)
Query: 32 QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-L 90
QS L+ V + +A +F++M + V+ + +++ Y+ G ++E ++F +
Sbjct: 174 QSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRM 233
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ G+ P+E T ++ A +G L G+ V+ + G R ++ +++++ G
Sbjct: 234 VVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGC 293
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+VFD M+ +DV M++ + K GD++ LF +M R+ VSW+ MI++ ++
Sbjct: 294 AASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQA 353
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
+ EA+RLF M ++ E A +V+VL CA+LG +D+G+WI+ SG V++
Sbjct: 354 NQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNL 413
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
GNA +D Y KCG D A +F E+ +NVVSWN+MI A +G+ E + L+EQ+ +
Sbjct: 414 GNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCI 473
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P++ TF+G+L+ C+H+GLV + R F M ++ I P EHY CM+D+LG+ G + EA+
Sbjct: 474 VPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAF 533
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
++ + M + + A WG+LL++CR +G+VE+ E A +L+ L P +SG YVL+S IYA
Sbjct: 534 EVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKN 593
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+WD + LR+ MRE VKK+PG S IE
Sbjct: 594 KWDQVKILRVLMRERGVKKNPGCSSIE 620
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 13/272 (4%)
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA---RLGAVDIGQWIHSYAE 259
M+ + ++ S A LF + ++ D T+V + A + G+ +H A
Sbjct: 108 MMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVAL 167
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + V VGNALV FY L ARN+F E+P ++VVSW ++ G A G +
Sbjct: 168 KWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAW 227
Query: 320 ELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHSIVPNLEHYGCM 376
++ +M +A G+ PN+ T V V++ GL+ R ++ + G+ V NLE+ +
Sbjct: 228 RVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSV-NLEN--AL 284
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
+D+ G+ GC A ++ SM+++ + W +++++ G + E A + ++ N+
Sbjct: 285 IDMFGKFGCAASAREVFDSMAVK-DVYSWTTMVNAYAKCGDL---ESAARLFDDMPRRNA 340
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
++ + Y++ + ++A L M E V+
Sbjct: 341 VSWSCMIAAYSQANQPEEAVRLFKAMIEEGVE 372
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 254/436 (58%), Gaps = 9/436 (2%)
Query: 50 IKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
+ A ++F++M + P+++ +N MI ++ +G E V +F + G PD T +
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L A + DL +G +HG +I+ G + ++++Y C + +VFD+M H D
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNLMISSLGKSGRDSEALRLFH 221
V N I G + G V+ L LFR+++++ +VVSW MI+ ++GRD EAL LF
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFR 375
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
EM+ + + T+ +LP C + A+ G+ H ++ G+ V VG+AL+D Y KC
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVY-VGSALIDMYAKC 434
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G + +R F IP KN+V WNA+I+G A +G+ + +E+++ M G P+ +F VL
Sbjct: 435 GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C+ +GL E+ F SM+ + I +EHY CMV +L R+G + +AY +IR M + P+
Sbjct: 495 SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPD 554
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A +WG+LLSSCR H +V L E A ++L LEP N GNY+LLSNIYA G W++ +R
Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614
Query: 462 MRENNVKKSPGQSLIE 477
M+ ++K+PG S IE
Sbjct: 615 MKNKGLRKNPGCSWIE 630
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 191/391 (48%), Gaps = 17/391 (4%)
Query: 1 IERKILRLLHGRNTRTHLT-QIHAHFLRHKL----HQSNLILAHFVS-VCGTLNEIKYAT 54
++ IL L+ T Q HAH L+ L H + +L+H+ + +C AT
Sbjct: 14 VQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMC-----FADAT 68
Query: 55 KIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+ + + P+V F+++I A+S + F+ + G+ PD +KAC G+
Sbjct: 69 LVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS 128
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L+ + VHG SGF+ ++ +V +Y C Q+ D +VFD M DV+ + ++
Sbjct: 129 ALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVA 188
Query: 175 GFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+ ++G VD+ LF EM + V +SWN MI+ SG SEA+ +F +M + FE
Sbjct: 189 AYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP 248
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D T+ +VLP L + +G IH Y GL V +AL+D Y KC V
Sbjct: 249 DGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQV 307
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F ++ +V S NA I GL+ NG+ E + L+ Q+ +G+ N ++ ++ CC+ G
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+A ELF M + + PN C++ G
Sbjct: 368 MEALELFREMQ-IAGVKPNSVTIPCLLPACG 397
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 247/410 (60%), Gaps = 10/410 (2%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N++I AYS NG + K+F + D ++ + A + G+L + + E+
Sbjct: 167 NALIDAYSKNGGFSDARKVFDEMPER----DVVSWNTAMAAMVREGELAGVRKLFDEMPE 222
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ +I G YT G+++ ++F M R+V+ + M+ G+CKKGD++ +
Sbjct: 223 KDTVSWNTILDG----YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVI 278
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M +++V+W +M+S+ + G EA +LF +M++ + ELD A VV++L CA G++
Sbjct: 279 FDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSL 338
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMIS 307
+G+ IH Y L R V NAL+D +CKCG ++ A VF E +K+ VSWN++I
Sbjct: 339 SLGKRIHRYVRKRNLGRST-HVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIG 397
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G G+ +EL+ QM +G +P+ T + VL+ C H G V++ R F++M + I+
Sbjct: 398 GFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIM 457
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCM+D+LGR G ++EA DLI+SM PN IWGSLLS+CR H +VE AE AV E
Sbjct: 458 PQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNE 517
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L L+P N+GNY +LSNIYAE G+W D RM M+ +K+ G S +E
Sbjct: 518 LSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVE 567
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 125/296 (42%), Gaps = 39/296 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYT---- 102
E+ K+F++M + +N+++ Y+ G E +LF + +N+ W +
Sbjct: 209 ELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCK 268
Query: 103 ----------FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL-------- 144
F + L + V C ++ + F ++ VEL
Sbjct: 269 KGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSI 328
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNL---------MIHGFCKKGDVDKGLYLF-REMRE 194
+C + G + HR V RNL +I FCK G V++ Y+F E +
Sbjct: 329 LAACAE--SGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ 386
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VSWN +I G +AL LF +M+ Q F D T++ VL C +G VD G+
Sbjct: 387 KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRH 446
Query: 255 HSYAESS-GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISG 308
S E G+ ++ G ++D + G++ A ++ K +P N V W +++S
Sbjct: 447 FSNMERDYGIMPQIEHYG-CMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSA 501
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 269/472 (56%), Gaps = 11/472 (2%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILA---HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+ HL QIHAH L LH ++IL F +V + ++ YA ++F+QM P+ +N+
Sbjct: 28 SMNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPS-GDLPYAQRLFDQMPQPNTFFYNT 86
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR----VGQC--VHG 124
+I+ Y+ + V LF ++ + PDE+TF L+KA V + +C +HG
Sbjct: 87 IIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHG 146
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ + GF ++ ++ LY G +VF+E DV+ + ++ + G+++
Sbjct: 147 AVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELEL 206
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F +M E+ VVSW M+S K+ EAL LF EM D DE T+V+V+ C
Sbjct: 207 ARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTN 266
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
LG V+ G +HSY +G + +VS+ NAL++ Y KCG +D A VF + RK++++WN+
Sbjct: 267 LGDVETGMNVHSYINENG-FGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNS 325
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MIS A +G E EL+ M+ G++P+ TF+ +L H GLV++ LF M +
Sbjct: 326 MISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDY 385
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I ++EHYGC+VD+LGR+G + EAY+LI +M I N +WG+LL++CR +G V + E
Sbjct: 386 GIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERV 445
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VK+L+ L+P G Y+LL +IY GR +A +R M+E+ K+PG S +
Sbjct: 446 VKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 264/476 (55%), Gaps = 7/476 (1%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMR 61
IL+ N Q+H H + L + L H + CG L YA +F++M
Sbjct: 93 ILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLC---YARSVFDEMV 149
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
V+ +NS+I YS ++ + LF L++N G+ D+ T ++ AC +GD +
Sbjct: 150 VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADY 209
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+ I E + +V+ + GQ+ KVF M R+++ N MI + K D
Sbjct: 210 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQD 269
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ +F ++ ++ ++SW+ MIS ++ S+AL +F +M+ + D + +V+
Sbjct: 270 IVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSS 329
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA+D+G+W+H Y + + + + N+L+D Y KCG A VFKE+ K+ +S
Sbjct: 330 CAHLGALDLGKWVHEYVRRNNIKADTI-MENSLIDMYMKCGSAKEALQVFKEMKEKDTLS 388
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN++I GLA NG + + L++ M+ +G PN TF+GVL CA+A LVE+ + F SM
Sbjct: 389 WNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMK 448
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
L+S+ P ++HYGC+VD+LGR+G + +A I M I P+ +W LL SC THG V +A
Sbjct: 449 RLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIA 508
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E K+L LEP NSGNY LLSN YA RW +A +R M + +V+KSPG S +E
Sbjct: 509 EIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 189/431 (43%), Gaps = 66/431 (15%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+ ++HA+++ L+ + ++ + L ++ +A K+F+Q+ P+ L+N +I+ +
Sbjct: 4 IKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLA 63
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ + + + + G+ PD TF +LKAC + L G+ +H I + G
Sbjct: 64 QSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIF 123
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++ LY +CG + VFDEM +DV
Sbjct: 124 VSNSLIHLYAACGNLCYARSVFDEMVVKDV------------------------------ 153
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSWN +I + R + L LF M+++ + D+ T++ V+ C RLG + ++
Sbjct: 154 -VSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVR 212
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILD------------------------------- 285
Y E + V +GN LVD++ + G L
Sbjct: 213 YIEDYCIEVDVY-LGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIV 271
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+AR +F +IP+K+++SW++MISG + +E++ QM V P+ V++ CA
Sbjct: 272 SARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCA 331
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H G ++ + + + ++I + ++D+ + G +EA + + M + + W
Sbjct: 332 HLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLS-W 389
Query: 406 GSLLSSCRTHG 416
S++ +G
Sbjct: 390 NSIIIGLANNG 400
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 257/441 (58%), Gaps = 4/441 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H + G+L + + + F++M + +V+ +NSMI Y+ G + E LF ++ G+
Sbjct: 151 LLHSYASAGSLGDSR---RFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGL 207
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
DE+T LL AC G+L G+ VH ++ G + +V++Y CG +
Sbjct: 208 LADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHT 267
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
FD M ++ + M+ K+ +D F ++ E+S++SWN MIS + GR EA
Sbjct: 268 CFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEA 327
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L++ M+ DE T+ AVL C +LG + G+ IH + + V++ N+L+D
Sbjct: 328 LDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDN-FHNPGVALFNSLLD 386
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y +CG +DTA ++F E+P KNV+SWNA+I LA +GR + + + M+ P++ T
Sbjct: 387 MYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEIT 446
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FV +L+ C H GL+E + F +M ++++ P +EHY CMVD+LGR G + +A DLI+ M
Sbjct: 447 FVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDM 506
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+RP+ +WG+LL +CR HGH+++ + +K+L+ LE + G +VL+SN+ E +W+D +
Sbjct: 507 PMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMK 566
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR MRE +KK+ G S IE
Sbjct: 567 RLRKLMREWGMKKNMGVSSIE 587
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 227/505 (44%), Gaps = 73/505 (14%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQ-SNLILAHFVSVCGTLNEIKYATKIFNQMR 61
R + LL + L Q+HAH + H + ++ ILA + ++ + YA ++F+++
Sbjct: 13 RHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAG-GGVWYARQLFDRIP 71
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P ++NS+I+AY + +E + L + GI P+E+T LLKAC V
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMV 131
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
HG +++ GF GQ V V N ++H + G
Sbjct: 132 THGVVVKLGF----------------VGQ---------------VFVGNALLHSYASAGS 160
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ F EM +R+VVSWN MI+ ++G EA LF MR Q DE T+V++L
Sbjct: 161 LGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFA 220
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL----------------- 284
C+ G ++ G+ +HS+ G R + + NALVD Y KCG L
Sbjct: 221 CSAEGNLEFGKLVHSHLLVRGC-RIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVS 279
Query: 285 --------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
D AR+ F++IP K+++SWNAMIS GR ++LY +M G+
Sbjct: 280 WTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGL 339
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
+P++ T VL+ C G + + + + H+ P + + ++D+ R G V A
Sbjct: 340 APDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHN--PGVALFNSLLDMYARCGQVDTA 397
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI-NLEPWNSGNYVLLSNIYAE 448
L M + N W +++ + HG + A + ++ + P + +V L +
Sbjct: 398 ISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNH 456
Query: 449 GGRWDDAETLRMWMRE-NNVKKSPG 472
GG + + MR NVK PG
Sbjct: 457 GGLLEAGQYYFQAMRHVYNVK--PG 479
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 254/436 (58%), Gaps = 9/436 (2%)
Query: 50 IKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
+ A ++F++M + P+++ +N MI ++ +G E V +F + G PD T +
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L A + DL +G +HG +I+ G + ++++Y C + +VFD+M H D
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNLMISSLGKSGRDSEALRLFH 221
V N I G + G V+ L LFR+++++ +VVSW MI+ ++GRD EAL LF
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFR 375
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
EM+ + + T+ +LP C + A+ G+ H ++ G+ V VG+AL+D Y KC
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVY-VGSALIDMYAKC 434
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G + +R F IP KN+V WNA+I+G A +G+ + +E+++ M G P+ +F VL
Sbjct: 435 GRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVL 494
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C+ +GL E+ F SM+ + I +EHY CMV +L R+G + +AY +IR M + P+
Sbjct: 495 SACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPD 554
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A +WG+LLSSCR H +V L E A ++L LEP N GNY+LLSNIYA G W++ +R
Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614
Query: 462 MRENNVKKSPGQSLIE 477
M+ ++K+PG S IE
Sbjct: 615 MKNKGLRKNPGCSWIE 630
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 190/391 (48%), Gaps = 17/391 (4%)
Query: 1 IERKILRLLHGRNTRTHLT-QIHAHFLRHKL----HQSNLILAHFVS-VCGTLNEIKYAT 54
++ I L+ T Q HAH L+ L H + +L+H+ + +C AT
Sbjct: 14 VQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMC-----FADAT 68
Query: 55 KIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+ + + P+V F+++I A+S + F+ + G+ PD +KAC G+
Sbjct: 69 LVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLS 128
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L+ + VHG SGF+ ++ +V +Y C Q+ D +VFD M DV+ + ++
Sbjct: 129 ALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVA 188
Query: 175 GFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+ ++G VD+ LF EM + V +SWN MI+ SG SEA+ +F +M + FE
Sbjct: 189 AYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP 248
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D T+ +VLP L + +G IH Y GL V +AL+D Y KC V
Sbjct: 249 DGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC-VSSALIDMYGKCSCTSEMSQV 307
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F ++ +V S NA I GL+ NG+ E + L+ Q+ +G+ N ++ ++ CC+ G
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRD 367
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+A ELF M + + PN C++ G
Sbjct: 368 IEALELFREMQ-IAGVKPNSVTIPCLLPACG 397
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 258/439 (58%), Gaps = 9/439 (2%)
Query: 47 LNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
L ++ A ++F +MR+ P+++ +N M+ + NG +E V +F ++ G WPD T
Sbjct: 183 LGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGST 242
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
+ +L A + D+ VG VHG +I+ G + ++++Y CG + + +VFDE+
Sbjct: 243 VSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVE 302
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNLMISSLGKSGRDSEALR 218
++ N + G + G VD L +F + +++ +VV+W +I+S ++G+D EAL
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALE 362
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LF +M+ E + T+ +++P C + A+ G+ IH ++ G++ V VG+AL+D Y
Sbjct: 363 LFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVY-VGSALIDMY 421
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG + AR F ++ N+VSWNA++ G A +G+ + +E++ M+ G P+ TF
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
VL+ CA GL E+ + SM+ H I P +EHY C+V +L R G + EAY +I+ M
Sbjct: 482 CVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+A +WG+LLSSCR H ++ L E A ++L LEP N GNY+LLSNIYA G WD+ +
Sbjct: 542 EPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRI 601
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M+ ++K+PG S IE
Sbjct: 602 REVMKSKGLRKNPGYSWIE 620
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 202/430 (46%), Gaps = 16/430 (3%)
Query: 20 QIHAHFLRHKLH---QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q HA LR L Q L F + +L+ + + + + + +P++ F+S+I A++
Sbjct: 21 QAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFA 80
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ + F+ L L + PD + +K+C + L GQ +H SGF
Sbjct: 81 RSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSI 140
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR--- 193
+ + +Y C ++ D K+FD M RDV+V + MI G+ + G V++ LF EMR
Sbjct: 141 VASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGG 200
Query: 194 -ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
E ++VSWN M++ G +G EA+ +F M Q F D +TV VLP L V +G
Sbjct: 201 VEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGA 260
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+H Y GL V +A++D Y KCG + VF E+ + S NA ++GL+ N
Sbjct: 261 QVHGYVIKQGLGSDKFVV-SAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRN 319
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G + +E++ + + + N T+ ++ C+ G +A ELF M + + PN
Sbjct: 320 GMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA-YGVEPNAVT 378
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIR----PNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ G + + I S+R + + +L+ G ++LA ++
Sbjct: 379 IPSLIPACGNISALMHGKE-IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM 437
Query: 429 --INLEPWNS 436
+NL WN+
Sbjct: 438 SALNLVSWNA 447
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L+HG+ +IH LR + + + + + I+ A + F++M +
Sbjct: 389 ISALMHGK-------EIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALN 441
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-QCVH 123
++ +N+++K Y+++G ++E +++F ++ G PD TF +L AC G G +C +
Sbjct: 442 LVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYN 501
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
G E +V L + G++++ + EM
Sbjct: 502 SMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 266/460 (57%), Gaps = 3/460 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH L+ L + + + + G ++YA +F++M V+ +++MI++ S N
Sbjct: 145 EIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNK 204
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR-SGFERFG-SI 137
+ ++L + + + P E ++ ++R+G+ +H +IR S E G
Sbjct: 205 EFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPT 264
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG + ++F+ ++ + V+ MI G + +++ LF + R V
Sbjct: 265 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+ W M+S+ ++ +A LF +MR + T+V++L +CA GA+D+G+W+HSY
Sbjct: 325 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 384
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + + + ALVD Y KCG ++ A +F E +++ WNA+I+G A +G GE
Sbjct: 385 IDKERVEVDCI-LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEE 443
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
++++ +M +GV PN TF+G+L C+HAGLV + ++LF M +VP +EHYGCMV
Sbjct: 444 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 503
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + EA+++I+SM I+PN +WG+L+++CR H + +L E A +L+ +EP N G
Sbjct: 504 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCG 563
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SNIYA RW DA +R M+ +KK PG S+IE
Sbjct: 564 YNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 603
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 187/418 (44%), Gaps = 30/418 (7%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
H +T QIHAH ++ H + I LN+ F +PS +N
Sbjct: 51 HDLSTLEQTKQIHAHIIKTHFHHALQI---------PLND-------FPSGLSPSAQ-WN 93
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+I +Y+ + ++A L+ + D + +LKAC V ++G+ +HG +++
Sbjct: 94 FVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKK 153
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G +R + ++ +Y C ++ VFD+M RDV+ + MI + + D L L
Sbjct: 154 GLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELI 213
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-----RDQAFE-LDEATVVAVLPICA 243
REM V + + S+ D+ +R+ M R+ E + T A+L + A
Sbjct: 214 REMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYA 273
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+ G + + + + +GL +K V A++ + L+ AR +F ++V+ W
Sbjct: 274 KCGHLGLARQLF-----NGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AM+S A + L++QM GV P K T V +L+ CA AG ++ + + + +
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
V + + +VD+ + G + A L +I + +W ++++ HG+ E A
Sbjct: 389 RVEVDCILNTA-LVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEEA 444
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/472 (37%), Positives = 256/472 (54%), Gaps = 4/472 (0%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLH--QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LL T L +IHA L H LH Q ++ F S A ++F+++ +P +
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSY-AEFGRPADAGRLFDEIPHPDI 84
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+ F S++ + + + +F+ G PD + L A G+GD R+G VHG
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGL 144
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I R G + + +V++Y CG+ + VFD M +D + M++G+ K VD
Sbjct: 145 IFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSA 204
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
L F +M +S VSW +I+ + + +AL LF +M + + T+V VL CA +
Sbjct: 205 LSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADI 264
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+G+ IH Y S ++ V NAL+D Y K G + +A +VF+E+ K+ +W M
Sbjct: 265 GALDLGRAIHGYGSKSNATTNII-VTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTM 323
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS G G VEL+ M+ G+ PN TFV VL+ C+HAGL+++ RELF M ++
Sbjct: 324 ISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYH 383
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P LEHYGCMVD+LGR G + EA LI M + P+ IW SLLS+C HG+ LAE A
Sbjct: 384 IDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAG 443
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
KE+I EP + G YVLL N+YA RW +A +R M + K PG S IE
Sbjct: 444 KEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIE 495
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/481 (33%), Positives = 272/481 (56%), Gaps = 22/481 (4%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGT--LNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L Q+HA ++ N I + + T +I YA +F+Q+ + +N++I+A
Sbjct: 31 LKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVIRAL 90
Query: 76 SLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
+ L +L + P+++TF +LKAC + L G+ VHG +++ G
Sbjct: 91 AETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVD 150
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVF---------------DEMSHR-DVIVRNLMIHGFC 177
+ ++ +Y CG M+D +F DE +V++ N+M+ G+
Sbjct: 151 DEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYA 210
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVV 236
+ G++ LF M +RSVVSWN+MIS ++G EA+ +FH M L + T+V
Sbjct: 211 RVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLV 270
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+VLP +RLG +++G+W+H YAE + + V +G+ALVD Y KCG ++ A VF+ +P+
Sbjct: 271 SVLPAISRLGVLELGKWVHLYAEKNKIRIDDV-LGSALVDMYAKCGSIEKAIQVFERLPQ 329
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
NV++WNA+I GLA +G+ +M G+SP+ T++ +L+ C+HAGLV++ R
Sbjct: 330 NNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSF 389
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + P +EHYGCMVD+LGR+G + EA +LI +M ++P+ IW +LL + + H
Sbjct: 390 FNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHK 449
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++++ A + L+ + P +SG YV LSN+YA G WD +R+ M++ +++K PG S I
Sbjct: 450 NIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWI 509
Query: 477 E 477
E
Sbjct: 510 E 510
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 248/414 (59%), Gaps = 10/414 (2%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ N++I AYS NG + K+F + D ++ + A + G+L + +
Sbjct: 470 TFVGNALIDAYSKNGGFSDARKVFDEMPER----DVVSWNTAMAAMVREGELAGVRKLFD 525
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
E+ + +I G YT G+++ ++F M R+V+ + M+ G+CKKGD++
Sbjct: 526 EMPEKDTVSWNTILDG----YTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEM 581
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F +M +++V+W +M+S+ + G EA +LF +M++ + ELD A VV++L CA
Sbjct: 582 ARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAE 641
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWN 303
G++ +G+ IH Y L R V NAL+D +CKCG ++ A VF E +K+ VSWN
Sbjct: 642 SGSLSLGKRIHRYVRKRNLGRST-HVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWN 700
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
++I G A +G G+ +EL+ QM +G +P+ T + VL+ C H G V++ R F++M
Sbjct: 701 SIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERD 760
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ I+P +EHYGCM+D+LGR G ++EA DLI+SM PN IWGSLLS+CR H +VE AE
Sbjct: 761 YGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEI 820
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AV EL L+P N+GNY +LSNIYAE G+W D RM M+ +K+ G S +E
Sbjct: 821 AVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVE 874
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 125/295 (42%), Gaps = 39/295 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYT---- 102
E+ K+F++M + +N+++ Y+ G E +LF + +N+ W +
Sbjct: 516 ELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCK 575
Query: 103 ----------FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL-------- 144
F + L + V C ++ + F ++ VEL
Sbjct: 576 KGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSI 635
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNL---------MIHGFCKKGDVDKGLYLF-REMRE 194
+C + G + HR V RNL +I FCK G V++ Y+F E +
Sbjct: 636 LAACAE--SGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ 693
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VSWN +I G +AL LF +M+ Q F D T++ VL C +G VD G+
Sbjct: 694 KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRH 753
Query: 255 HSYAESS-GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMIS 307
S E G+ ++ G ++D + G++ A ++ K +P N V W +++S
Sbjct: 754 FSNMERDYGIMPQIEHYG-CMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLS 807
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 263/471 (55%), Gaps = 10/471 (2%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNS 70
++ + Q H+ LR L +N ++ + C +I YA K+F + NP L+N+
Sbjct: 13 SSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNT 72
Query: 71 MIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+ KA+ SL+ + ++ + + P+ +TF L++AC + + +H +++
Sbjct: 73 LFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRACKLEEEAKQ---LHAHVLKF 129
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
GF ++ +Y + G +DD +VF MS +V+ ++ G+ + G VD+ +F
Sbjct: 130 GFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFRVF 189
Query: 190 REMR-ERSVVSWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGA 247
M +++ VSWN MI+ K R EA LF MR ++ ELD +L C +GA
Sbjct: 190 ELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGA 249
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
++ G WIH Y E +G+ + ++D YCKCG LD A +VF + K V SWN MI
Sbjct: 250 LEQGMWIHKYVEKTGIVLDS-KLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIG 308
Query: 308 GLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
G A +G+GE + L+++M + V+P+ TFV VLT CAH+GLVE+ F M +H I
Sbjct: 309 GFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGI 368
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P EHYGCMVD+L R+G + EA +I M + P+AA+ G+LL +CR HG++EL E
Sbjct: 369 DPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGN 428
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+I L+P NSG YV+L N+YA G+W+ +R M + VKK PG S+IE
Sbjct: 429 RVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIE 479
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 243/419 (57%), Gaps = 6/419 (1%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL----GVGDLRVG 119
S L +++I+A++ +G + + L+A L G++P +T LLK+ G R+
Sbjct: 52 SAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLA 111
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
VH +R G F + ++ ++ G++ D + + D N +I +
Sbjct: 112 LAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHAR 171
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G V LF EM ER+ VSW+ M++ ++G EAL +F +M+ Q D+ +V V
Sbjct: 172 AGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGV 231
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+LGA++ G+W+H Y +++ + R V +G ALVD Y KCG + VF+ + KN
Sbjct: 232 LAACAQLGALEQGKWVHGYLKANNI-RMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKN 290
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V++W MI GLA +GRG + L+ QM + GV P+ F+G L C H GLV+K RELF
Sbjct: 291 VLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFN 350
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + I P +EHYGCMVD+L R+G + EA D++ M ++P+A IWG+L++ CR H +V
Sbjct: 351 SMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNV 410
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
ELAE+ +K I LEP SG YVLL NIY+ GR A +R MRE V+K+PG S +E
Sbjct: 411 ELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVE 469
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 147/327 (44%), Gaps = 42/327 (12%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
+ LI AH + A +F++M + + +++M+ Y G E + +F+ ++
Sbjct: 163 NTLITAH-----ARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQ 217
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G+ PD+ +L AC +G L G+ VHG + + + +V++Y CG++
Sbjct: 218 AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQ 277
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
GM+VF+ M ++V+ MI G L GR
Sbjct: 278 LGMEVFEGMKDKNVLAWTTMIKG-------------------------------LAMHGR 306
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVG 271
S++L LF +M + D+ + L C G VD G + +S + G+ K+ G
Sbjct: 307 GSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYG 366
Query: 272 NALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+VD + G+L AR++ +++P K + + W A+++G F+ EL + + I +
Sbjct: 367 -CMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIE--L 423
Query: 331 SPNKA-TFVGVLTCCAHAGLVEKAREL 356
P+K+ +V + + +G ARE+
Sbjct: 424 EPDKSGAYVLLGNIYSASGRHASAREI 450
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + + + + + V + E++ ++F M++ +VL + +MIK +++G
Sbjct: 247 VHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGR 306
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ-----CVHGEIIRSGFERFG 135
+ + LF+ +++ G+ PD+ F L AC G + G+ V+ I+ E +G
Sbjct: 307 GSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYG 366
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFR---E 191
+ V+L G + + + ++M + D ++ ++ G +V+ Y+ + E
Sbjct: 367 CM----VDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIE 422
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ ++ L+ + SGR + A + + MR++ E
Sbjct: 423 LEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVE 460
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 245/417 (58%), Gaps = 6/417 (1%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCV 122
++ + S I + NG E F+ ++ G+ P+ TF LL AC + LR G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 123 HGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H + + G + ++ +G +V++Y+ CGQ+D +FDEM R+ + N MI G + G
Sbjct: 114 HAYVRKLGLDT-ENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNG 172
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+V + + LF +M ER +SW MI K G +AL F EM+ E D T+++VL
Sbjct: 173 EVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLA 232
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+ +G WI+ + ++ + + N+L+D Y +CG + AR VF+++P++++V
Sbjct: 233 ACANLGALGLGLWINRFVMKQD-FKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLV 291
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+MI G A NG E +E + M +G P+ +F G LT C+H+GLV++ + F M
Sbjct: 292 SWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIM 351
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
I P +EHYGC+VD+ R+G + +A ++I +M ++PN + GSLL++CRTHG V L
Sbjct: 352 KRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGL 411
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE +K L ++P + NYVLLSNIYA GRWD A +R M+ + K PG S IE
Sbjct: 412 AERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIE 468
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 33/255 (12%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
C E+ A +F+QM + + SMI + G E+ ++ F ++ G+ PD T
Sbjct: 168 CMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTI 227
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC +G L +G ++ +++ F+ I ++++Y+ CG + +VF++M
Sbjct: 228 ISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPK 287
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R ++ N MI GF G + EAL F+ M
Sbjct: 288 RSLVSWNSMIVGFALNGHAE-------------------------------EALEFFNLM 316
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
R + F D + L C+ G VD G Q+ + + ++ G LVD Y + G
Sbjct: 317 RKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYG-CLVDLYSRAG 375
Query: 283 ILDTARNVFKEIPRK 297
L+ A NV +P K
Sbjct: 376 RLEDALNVIANMPMK 390
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL--VEK 352
P +VSW + I+ NG+ + +M GV PN TF+ +L+ C L +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ A + L N+ +VD+ + G + A+ + M +R N+ W +++ C
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR-NSVSWNTMIDGC 168
Query: 413 RTHGHV 418
+G V
Sbjct: 169 MRNGEV 174
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 261/479 (54%), Gaps = 12/479 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LL G + + +IHA +R + Q + + A + + +P+ +
Sbjct: 30 LLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAASGRLDLAVALLRRTPDPTAVF 89
Query: 68 FNSMIKAYSLNGPSEEPVKLFA--LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+ S I A+S G + L + LL G+ P +T + L AC G L VG+ +HG
Sbjct: 90 YTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPAC---GCLAVGRALHGY 146
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKGDVDK 184
++ + ++ +Y G+ +FD M V+ M+ + K G +D
Sbjct: 147 AVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDD 206
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
LF + + +V WN M+ + GR SEALRLF +M E DE +VV L A+
Sbjct: 207 ARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQ 266
Query: 245 LGAVDIGQWIHSYAESSGLYRKV---VSVGNALVDFYCKCGILDTARNVFKEIP---RKN 298
LG + G+W+HS+ + G +V VG ALVD Y KCG L+ A VF+++ ++
Sbjct: 267 LGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRD 326
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
VV+WNAMI+G A +GR +E + Q+ A+G+ P TF+GVL C+H+GLV++ R LFA
Sbjct: 327 VVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFA 386
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+M + IVP +EHYGCMVD+LGR+G V EA+DL++SM +P+AA+W SLL +CR H ++
Sbjct: 387 AMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNL 446
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L + L+ NSG YVLLSN+YA G+W + +R MR + V+K PG S +E
Sbjct: 447 ALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVE 505
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/475 (36%), Positives = 262/475 (55%), Gaps = 51/475 (10%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMR 61
+ L LL + L QIH L+ L + + ++ C + N + YA +F+++
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P+ ++N+MI+ YS + EE + L+ + + + YTF LLKAC + L Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H II+ GF GS E+YT+ N +++ + K GD
Sbjct: 140 IHAHIIKMGF---GS------EIYTT----------------------NSLLNVYSKSGD 168
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ LF ++ +R D+EAL LFH M+ +LD +V+ L
Sbjct: 169 IKSARLLFDQVDQR-----------------DTEALNLFHRMQTAGIKLDNVALVSTLQA 211
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LG +D G+WIH+Y + + + +G L+D Y KCG L+ A VF+++ K V
Sbjct: 212 CADLGVLDQGKWIHAYIKKHEIEIDPI-LGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 270
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W AMISG A +GRG +E + +M GV PN+ TF G+LT C+HAGLV +A+ LF SM
Sbjct: 271 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 330
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+H P++EHYGCMVD+LGR+G ++EA +LI +M ++PNAAIWG+LL++C HG++EL
Sbjct: 331 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 390
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ K LI ++P + G Y+ L++I+A G W+ A +R M+E V K PG S+I
Sbjct: 391 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVI 445
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 223/357 (62%), Gaps = 2/357 (0%)
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCKKG 180
+H ++R+G +V+ Y SCG + +VFDE + + DV+ N+MI G+ K G
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSG 152
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D+ + LF M R+VVSW ++I + + + EA+ +F M+ + E D +++VL
Sbjct: 153 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 212
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C LG VD+G+W+H + GL +++ + NA++D Y KCG + A VF+ + +K++V
Sbjct: 213 ACGDLGVVDLGEWVHRFVLRRGLCQEI-PLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+W MI+G A +G G VEL+ +M + VSPN TF+ VL+ C+H GL + R F +M
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EHYGCM+D+LGR+GC+ EA LI+ M + NAAIWG+LL++ RTHG EL
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 391
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A+ LI LEP NSGNY+LLSNIYAE RWD LR+ MR+ ++ PG S I+
Sbjct: 392 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSID 448
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 35/314 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M +V+ + +I AY+ EE +++F ++ GI PD +L
Sbjct: 153 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 212
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G + +G+ VH ++R G + + ++++Y CG + ++VF+ M + ++
Sbjct: 213 ACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVT 272
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
MI GF G LG SEA+ LF M +
Sbjct: 273 WTTMIAGFALHG--------------------------LG-----SEAVELFRRMEKENV 301
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
++ T +AVL +C+ +G D+G+W S + V ++D + G L AR
Sbjct: 302 SPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 361
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATFVGVLTCCAH 346
+ +++P K N W A+++ +G ELG + +I + P N ++ + A
Sbjct: 362 GLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIE--LEPHNSGNYILLSNIYAE 419
Query: 347 AGLVEKARELFASM 360
+ REL SM
Sbjct: 420 QERWDAVRELRISM 433
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H LR L Q ++ + + +K A ++F M S++ + +MI ++L+G
Sbjct: 226 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 285
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
E V+LF ++ + P++ TF +L C VG +G+
Sbjct: 286 GSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGR 325
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 243/441 (55%), Gaps = 35/441 (7%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + + CG ++ A K+F+ + + + + + I Y G E + +F L +G+
Sbjct: 149 LINLYTKCGFIDN---AFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGL 205
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD ++ +L AC GDLR G+ + I +G R + +V+ Y CG M+
Sbjct: 206 RPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARS 265
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
V F M E+++VSW+ MI +G EA
Sbjct: 266 V-------------------------------FDGMLEKNIVSWSSMIQGYASNGLPKEA 294
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF +M ++ + D +V VL CARLGA+++G W + + V +G AL+D
Sbjct: 295 LDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSV-LGTALID 353
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +D A VF+ + +K+ V WNA ISGLA +G + + L+ QM G+ P++ T
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNT 413
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FVG+L C HAGLVE+ R F SM + ++ P +EHYGCMVD+LGR+GC+ EA+ LI+SM
Sbjct: 414 FVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSM 473
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ NA +WG+LL CR H +L E +K+LI LEPW+SGNYVLLSNIYA +W++A
Sbjct: 474 PMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAA 533
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R M E VKK PG S IE
Sbjct: 534 KIRSIMSERGVKKIPGYSWIE 554
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 209/415 (50%), Gaps = 34/415 (8%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
RL+ G + HL IHA LR L + +L + Y+ +I +Q + P++
Sbjct: 15 RLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIF 74
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
LFN+MI+ LN +E ++++ ++ G+ PD +TF +LKAC V D +G +H +
Sbjct: 75 LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
+++G E ++I ++ LYT CG +D+ KVFD++
Sbjct: 135 VKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIP------------------------ 170
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+++ SW IS G+ EA+ +F + + D ++V VL C R G
Sbjct: 171 -------DKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTG 223
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+ G+WI Y +G+ R V V ALVDFY KCG ++ AR+VF + KN+VSW++MI
Sbjct: 224 DLRSGEWIDEYITENGMVRNVF-VATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMI 282
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
G A NG + ++L+ +M+ +G+ P+ VGVL CA G +E + +++ +
Sbjct: 283 QGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELG-DWASNLINGNEF 341
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ N ++D+ + G + A+++ R M + + +W + +S GHV+ A
Sbjct: 342 LDNSVLGTALIDMYAKCGRMDRAWEVFRGMR-KKDRVVWNAAISGLAMSGHVKDA 395
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 250/431 (58%), Gaps = 4/431 (0%)
Query: 50 IKYATKIFNQMR--NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
++ A +IFN +R ++ +++M+ Y N EE + LF +K G+ DE L
Sbjct: 218 VEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSAL 277
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DV 166
AC V ++ +G+ VHG ++ G E + S++ ++ LY+SCG++ D ++FD+ D+
Sbjct: 278 SACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDL 337
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I N MI G+ + G + LF M E+ VVSW+ MIS + SEAL LF EM+
Sbjct: 338 ISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH 397
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
DE +V+ + C L +D+G+WIH+Y + L V+ + L+D Y KCG ++
Sbjct: 398 GVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVI-LSTTLIDMYMKCGCVEN 456
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF + K V +WNA+I GLA NG E + ++ M G PN+ TF+GVL C H
Sbjct: 457 ALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRH 516
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
GLV R F SM H I N++HYGCMVD+LGR+G ++EA +LI SM + P+ A WG
Sbjct: 517 MGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWG 576
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LL +CR H E+ E ++LI L+P + G +VLLSNIYA G W + +R M ++
Sbjct: 577 ALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHG 636
Query: 467 VKKSPGQSLIE 477
V K+PG S+IE
Sbjct: 637 VVKTPGCSMIE 647
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 204/450 (45%), Gaps = 71/450 (15%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA--YSLNGPSEEPVKLFALLKNL 94
L +F S TL Y+ +IFN +RNP+ +N++++A Y N P + + + L
Sbjct: 41 LINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLH-YKLFLAS 99
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
PD YT+ LL+ C G+ +H + SGF+ +R ++ LY CG +
Sbjct: 100 HAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSA 159
Query: 155 MKVFDE-------------------------------MSHRDVIVRNLMIHGFCKKGDVD 183
+VF+E M R+ I N MI F +KG V+
Sbjct: 160 RRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVE 219
Query: 184 KGLYLFREM--RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
K +F + RER +VSW+ M+S ++ EAL LF EM+ +DE VV+ L
Sbjct: 220 KARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSA 279
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE-------- 293
C+R+ V++G+W+H A G+ VS+ NAL+ Y CG + AR +F +
Sbjct: 280 CSRVLNVEMGRWVHGLAVKVGV-EDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLI 338
Query: 294 ------------------------IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
+P K+VVSW+AMISG A + + L+++M G
Sbjct: 339 SWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHG 398
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
V P++ V ++ C H ++ + + A ++ + + N+ ++D+ + GCV A
Sbjct: 399 VRPDETALVSAISACTHLATLDLGKWIHAYIS-RNKLQVNVILSTTLIDMYMKCGCVENA 457
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
++ +M + W +++ +G VE
Sbjct: 458 LEVFYAME-EKGVSTWNAVILGLAMNGSVE 486
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 21 IHAHFLRHKLHQSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
IHA+ R+KL Q N+IL+ CG ++ A ++F M V +N++I +
Sbjct: 425 IHAYISRNKL-QVNVILSTTLIDMYMKCGC---VENALEVFYAMEEKGVSTWNAVILGLA 480
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ-----CVHGEIIRSGF 131
+NG E+ + +FA +K G P+E TF +L AC +G + G+ +H I +
Sbjct: 481 MNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANI 540
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +G + V+L G + + ++ D M + + G C+K
Sbjct: 541 KHYGCM----VDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRK 584
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 262/442 (59%), Gaps = 4/442 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG- 95
L HF + +L++ A K+F++M V+ + +++ Y+ G ++E +LF + +G
Sbjct: 184 LVHFYANHKSLDD---AGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGG 240
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+ T + A +G L G +H + G R ++ +V+++ CG +
Sbjct: 241 MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAR 300
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VFD M +DV M++ + K GD++ LF++M R+VVSW+ MI++ + + E
Sbjct: 301 EVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEE 360
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ LF EM + +AT+V+VL CA+LG +D+G+WI+ S V++GNAL+
Sbjct: 361 AVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALI 420
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG + A +F E+ +NVVSWN MI A +G+ E + L+EQ+ + + P++
Sbjct: 421 DMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQI 480
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF+G+L C+H+GLV + R F M + I P +EHY CM+D+LG+ G + EA+++ R
Sbjct: 481 TFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARG 540
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + + A WG+LL++CR HG+VE+ +L+ L+P +SG YVL+S IYA +WD
Sbjct: 541 MPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQV 600
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+ LRM MR+ VKK+PG S IE
Sbjct: 601 KMLRMTMRDRGVKKNPGCSSIE 622
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-R 224
V+V N ++H + +D +F EM ER VVSW ++ ++G EA RLF M
Sbjct: 178 VLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVV 237
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF------- 277
+ T+VA + ++G + G +H Y G+ R V++ NALVD
Sbjct: 238 VGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARS-VNLDNALVDMFGKCGCV 296
Query: 278 ------------------------YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
Y KCG L++A +FK++PR+NVVSW+ MI+ +
Sbjct: 297 RYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLN 356
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ E V L+ +MIA GV P AT V VL+ CA G ++ R ++ + + I +
Sbjct: 357 QPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLG 416
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++D+ + G V EA L M+ R N W +++ + HG E A ++L
Sbjct: 417 NALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+ IH A G + V VGNALV FY LD A VF E+P ++VVSW ++ G A
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 311 FNGRGELGVELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHSIV 367
G + L+ +M + G+ PN T V ++ GL+ L +T G+ V
Sbjct: 221 RAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSV 280
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
NL++ +VD+ G+ GCVR A ++ M ++ + W S++++ G +E AE K+
Sbjct: 281 -NLDN--ALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAEQLFKD 336
Query: 428 L 428
+
Sbjct: 337 M 337
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 263/486 (54%), Gaps = 35/486 (7%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A ++ Q+ ++ F++ C + N + A QM+ P+V ++N++IK +
Sbjct: 801 AAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVTCSHPI 860
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
++ + + + P YT++ L++A G+ + I + GF I+ ++
Sbjct: 861 RSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGF--GESLQAHIWKFGFGFHVQIQTTLI 918
Query: 143 ELYTSCGQMDDGMKVFDEMSHRDVIVR-------------------------------NL 171
Y++ G++ + KVFDEM RD + N
Sbjct: 919 GFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNEATWNC 978
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I G+ + G+++ LF +M + ++SW MI+ ++ R EA+ +F++M ++ D
Sbjct: 979 LIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEEGIIPD 1038
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+ V+ CA LG ++IG+ +H Y +G V +G+ALVD Y KCG L+ A VF
Sbjct: 1039 EVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVY-IGSALVDMYSKCGSLERALLVF 1097
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+P+KN+ WN++I GLA +G + ++++ +M + V PN TFV V T C HAGLVE
Sbjct: 1098 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVE 1157
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R ++ SM +SIV N+EHYGCMV + ++G + EA +LI SM PNA IWG+LL
Sbjct: 1158 EGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLDG 1217
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-S 470
CR H ++E+AE A +L+ LEP NSG Y LL ++YAE RW D +R MRE ++K
Sbjct: 1218 CRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 1277
Query: 471 PGQSLI 476
PG S I
Sbjct: 1278 PGTSSI 1283
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 260/461 (56%), Gaps = 7/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H + L + L H + CG L YA +F++M V+ +NS+I YS
Sbjct: 573 QMHNHITKLGLLSDIFVSNSLIHLYAACGNLC---YARSVFDEMVVKDVVSWNSLICGYS 629
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
++ + LF L++N G+ D+ T ++ AC +GD + + I E
Sbjct: 630 QCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVY 689
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +V+ + GQ+ KVF M R+++ N MI + K D+ +F ++ ++
Sbjct: 690 LGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKD 749
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
++SW+ MIS ++ S+AL +F +M+ + D + +V+ CA LGA+D+G+W+H
Sbjct: 750 LISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHE 809
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + + + + N+L+D Y KCG A VFKE+ K+ +SWN++I GLA NG +
Sbjct: 810 YVRRNNIKADTI-MENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEK 868
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L++ M+ +G PN TF+GVL CA+A LVE+ + F SM L+S+ P ++HYGC+
Sbjct: 869 ESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCV 928
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + +A I M I P+ +W LL SC THG V +AE K+L LEP NS
Sbjct: 929 VDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNS 988
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNY LLSN YA RW +A +R M + +V+KSPG S +E
Sbjct: 989 GNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 255/472 (54%), Gaps = 39/472 (8%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R + LL ++ R L QIH+ + H+ +F++
Sbjct: 23 RLVALLLEHQDRRRQLLQIHSQLIAHQ--------------------------VFDRRPT 56
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW---PDEYTFAPLLKACLGVGDLRVG 119
P +++++KAYS ++ ++LF + W D Y F LKAC G+G R
Sbjct: 57 P----WHALLKAYSHGPHPQDALQLFRHAR----WHAADDTYAFTFALKACAGLGWPRCC 108
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+HG ++R GFE + +V +Y CG + D F+EM ++ + N++I GF
Sbjct: 109 MQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGW 168
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G+V+ LF M R+VVSW+ MI ++ R EA+ LF M + E TV+AV+
Sbjct: 169 GEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVV 228
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE-IPRKN 298
P + +G + IG+ +H Y E GL V VGN+L+D Y K G + + VF E + R+N
Sbjct: 229 PALSNVGKILIGEALHGYCEKEGLVWDV-RVGNSLIDLYAKIGSIQNSLRVFDEMLDRRN 287
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+VSW ++ISG A +G VEL+ M G+ PN+ TF+ VL C+H GLVE+ F
Sbjct: 288 LVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFK 347
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM ++I P+++H+GC++D+LGR+G +REA +IR + NA +W +LL C +G V
Sbjct: 348 SMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEV 407
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
E+ E +K+++ LE G++V+LSN+ E R+ DAE +R + + N KS
Sbjct: 408 EMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKS 459
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 189/431 (43%), Gaps = 66/431 (15%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+ ++HA+++ L+ + ++ + L ++ +A K+F+Q+ P+ L+N +I+ +
Sbjct: 469 IKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLA 528
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ + + + + G+ PD TF +LKAC + L G+ +H I + G
Sbjct: 529 QSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIF 588
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++ LY +CG + VFDEM +DV
Sbjct: 589 VSNSLIHLYAACGNLCYARSVFDEMVVKDV------------------------------ 618
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSWN +I + R + L LF M+++ + D+ T++ V+ C RLG + ++
Sbjct: 619 -VSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVR 677
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILD------------------------------- 285
Y E + V +GN LVD++ + G L
Sbjct: 678 YIEDYCIEVDVY-LGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIV 736
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+AR +F +IP+K+++SW++MISG + +E++ QM V P+ V++ CA
Sbjct: 737 SARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCA 796
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H G ++ + + + ++I + ++D+ + G +EA + + M + + W
Sbjct: 797 HLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLS-W 854
Query: 406 GSLLSSCRTHG 416
S++ +G
Sbjct: 855 NSIIIGLANNG 865
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/500 (33%), Positives = 269/500 (53%), Gaps = 36/500 (7%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPSVLLFN 69
++ RT + QI A + L+ L+ + C + + YA ++F +RNP V ++N
Sbjct: 16 KSLRT-VKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYN 74
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
++I+ S + ++LF ++ + PD ++FA LLKA L G +H +
Sbjct: 75 TLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVG 134
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI--------------------- 167
G + + ++ +Y C + KVFDEM +++
Sbjct: 135 YGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQV 194
Query: 168 -----VRNL-----MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
+RNL M+ G+ K G++ +F +M + VSW+ MI +G ++A
Sbjct: 195 FRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAF 254
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F E+R + +E ++ VL CA+ GA + G+ +H + E SG + +++SV NAL+D
Sbjct: 255 AFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSG-FLQIISVNNALIDT 313
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG LD AR VF + R++ VSW AMI+G+A +G GE + L+ +M + P+ TF
Sbjct: 314 YSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITF 373
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ +L C+HAGLV+ F+ M + I P +EHYGCMVD+ GR+G +++AYD + M
Sbjct: 374 ISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMP 433
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
I PN +W +LL +C HG++ LA ++L L+P NSG++VLLSNIYA G+W D
Sbjct: 434 ISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAA 493
Query: 458 LRMWMRENNVKKSPGQSLIE 477
LR M +KK+PG S+IE
Sbjct: 494 LRRSMTHQRLKKTPGWSMIE 513
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 270/489 (55%), Gaps = 44/489 (8%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
L+ + N +L+ + G++ +K F++M + +N+ I +S N +E +
Sbjct: 85 LKRDIFSWNALLSAYAK-SGSIQNLK---ATFDRMPFRDSVSYNTTIAGFSGNSCPQESL 140
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI--GVVE 143
+LF ++ G P EYT +L A + DLR G+ +HG II F G++ I + +
Sbjct: 141 ELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNF--LGNVFIWNALTD 198
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF--------------------------- 176
+Y CG+++ +FD ++ ++++ NLMI G+
Sbjct: 199 MYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVT 258
Query: 177 --------CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
C+ G VD+ +F E +E+ +V W M+ K+GR+ +AL LF+EM +
Sbjct: 259 MSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHI 318
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E D T+ +V+ CA+L ++ GQ +H + +GL ++ V +AL+D Y KCG +D AR
Sbjct: 319 EPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL-VSSALIDMYSKCGFIDDAR 377
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF +P +NVVSWNAMI G A NG + +EL+E M+ + P+ TF+G+L+ C H
Sbjct: 378 SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
+E+ +E F S+T H + P L+HY CMV++LGR+G + +A LI++M+ P+ IW +L
Sbjct: 438 WIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS C T G + AE A + L L+P + Y++LSN+YA GRW D ++R M+ NVK
Sbjct: 498 LSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVK 557
Query: 469 KSPGQSLIE 477
K G S IE
Sbjct: 558 KFAGFSWIE 566
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 158/336 (47%), Gaps = 20/336 (5%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G++ D +FD+M RD+ N ++ + K G + F M R VS+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N I+ + E+L LF M+ + FE E T+V++L A+L + G+ IH
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIV 183
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
V + NAL D Y KCG ++ AR +F + +KN+VSWN MISG A NG+ E +
Sbjct: 184 RNFLGNVF-IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L QM G P++ T ++ G V++AR +F+ ++ + M+
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCWTAMMVGY 297
Query: 381 GRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHG--HVELAEHAVKELINLEPWN 435
++G +A L M I P++ S++SSC H A H L L
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL---- 353
Query: 436 SGNYVLLS----NIYAEGGRWDDAETLRMWMRENNV 467
N +L+S ++Y++ G DDA ++ M NV
Sbjct: 354 -NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
EA VL C R ++ + + S+ E + N L+ Y K G L A+N+F
Sbjct: 23 EAYTQLVLE-CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 292 KEIPRKNVVSWNAMISGLA-----------------------------FNGRG--ELGVE 320
++ ++++ SWNA++S A F+G + +E
Sbjct: 82 DKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+++M +G P + T V +L A + +++ S+ + + + N+ + + D+
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII-VRNFLGNVFIWNALTDMY 200
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ G + +A L ++ + N W ++S +G E
Sbjct: 201 AKCGEIEQARWLFDCLT-KKNLVSWNLMISGYAKNGQPE 238
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 262/475 (55%), Gaps = 35/475 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMRN 62
L LL + L QI A+ ++ L +L ++ C T + + +A +F+Q+ +
Sbjct: 33 LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
++LFN M + Y+ + LF L G+ PD+YTF+ LLKAC LR G +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++ G I ++ +Y C M+ VFDEM
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM--------------------- 191
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ +VS+N +I+ +S + +EAL LF E++ E + T+++V+ C
Sbjct: 192 ----------EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSC 241
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A LGA+D+G+WIH Y + G + K V V AL+D + KCG L A ++F+ + ++ +W
Sbjct: 242 ALLGALDLGKWIHEYVKKKG-FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI A +G G + ++E+M +GV P++ TF+G+L C+HAGLVE+ R F SM+
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P ++HYGCMVD+LGR+G + EAY+ + + I+ +W +LLS+C THG+VE+A+
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++ + L+ + G+YV+LSN+YA GRW+D LR M++ V K PG S +E
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVE 475
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 260/463 (56%), Gaps = 40/463 (8%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ H A FL Q+ L+ F CG + A K+F++M V+ + +++ A
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVT--FYGACGQCGD---ARKVFDEMAERDVVSWTALLSA 193
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
++ G E + +L + + P+E T A +L AC +G R G+ VHG R E
Sbjct: 194 FTRGGMFMEAL---GVLAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELN 250
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ ++++Y C ++D +VFD + RD+
Sbjct: 251 LIVGNALLDMYVKCEKLDLARRVFDMLLARDI---------------------------- 282
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
VSW +MIS L + R SEAL +F+ M+ + D+ + VL CA LGA++ G+W+
Sbjct: 283 ---VSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWV 339
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H Y E G+ V VG ++VD Y KCG LDTA ++F+E+P KNV SWNA+I+G A +GR
Sbjct: 340 HEYIERKGIEWDV-HVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGR 398
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G ++ +++M+A G+ PN+ TF+ VL C H+GLV++ R+LF MT + + P +HYG
Sbjct: 399 GREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYG 458
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGR+G ++EAYD+I++M +RP W +LLS+C+ HG ++ ++ + + LE
Sbjct: 459 CMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESS 518
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+G YVLLSN+YA RW D R +M E ++K PG S+IE
Sbjct: 519 GNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIE 561
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 165/363 (45%), Gaps = 59/363 (16%)
Query: 68 FNSMIKAYSLNGPSEEPVKLFALL-----KNLGIWPDEYTFAPLLKAC--LGVGDLRVGQ 120
FN++I + + G + FALL G PD YT LKAC LG G LR G
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLG-GGLREGC 138
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H ++GF ++ +V Y +CGQ D KVFDEM+ RD
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERD--------------- 183
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
VVSW ++S+ + G EAL + EM +E T+ +VL
Sbjct: 184 ----------------VVSWTALLSAFTRGGMFMEALGVLAEMD---VTPNEVTLASVLV 224
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKV----VSVGNALVDFYCKCGILDTARNVFKEIPR 296
C LG G+ +H + +R+ + VGNAL+D Y KC LD AR VF +
Sbjct: 225 ACGNLGTARAGKAVHGW-----YFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLA 279
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+++VSW MISGL R +E++ M GV P+K VL+ CA G +E R +
Sbjct: 280 RDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWV 339
Query: 357 --FASMTGLHSIVPNLEHYGC-MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
+ G+ V H G +VD+ + GC+ A + + M ++ N + W +L++
Sbjct: 340 HEYIERKGIEWDV----HVGTSVVDMYVKCGCLDTAVSIFQEMPLK-NVSSWNALINGFA 394
Query: 414 THG 416
HG
Sbjct: 395 LHG 397
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 264/458 (57%), Gaps = 34/458 (7%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H +R L + + +++ ++ A K+F+++ ++ +NSMI YS +
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHA 209
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
E V LF + G P+E + +L AC +GDL++G V E F V
Sbjct: 210 GEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV---------EEF------V 254
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
VE ++M+ + + + +IH + K GD+ +F M+++ V+WN
Sbjct: 255 VE---------------NKMT-LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWN 298
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
MI+ ++G EA++LF +MR + D+ T++ +L CA +GA+D+G+ + YA
Sbjct: 299 AMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER 358
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
G ++ V VG ALVD Y KCG LD A VF +P+KN VSWNAMIS LAF+G+ + + L
Sbjct: 359 G-FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALAL 417
Query: 322 YEQMIAKG--VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ M+ +G VSPN TFVGVL+ C HAGLV++ R LF M+ +VP +EHY CMVD+
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
R+G + EA+D + +M +P+ I G+LL +C+ +++++E +K L+ LEP NSGNY
Sbjct: 478 FSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNY 537
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+ S +YA RWDD+ +RM M++ V K+PG S I+
Sbjct: 538 VISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWID 575
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 51/421 (12%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L QIHA L + +H+ N F+ L + YA+ F+ + +P+ FN MI+ S
Sbjct: 47 QLKQIHAQLLTNSIHKPN----SFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLS 102
Query: 77 LN-GPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC---LGVGDLRVGQCVHGEIIRSGFE 132
S ++ ++ +K LG+ P+ T+ L AC L V + R+G C +IR G +
Sbjct: 103 TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHC---SVIRRGLD 159
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
G + ++ +Y CG+M D KVFDE+S +D+
Sbjct: 160 EDGHVSHSLITMYARCGKMGDARKVFDEISQKDL-------------------------- 193
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
VSWN MIS K EA+ LF EM + F+ +E ++V+VL C LG + +G
Sbjct: 194 -----VSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
W+ + + + +G+AL+ Y KCG L +AR +F + +K+ V+WNAMI+G A N
Sbjct: 249 WVEEFVVENKMTLNYF-MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN 307
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE--KARELFASMTGLHSIVPNL 370
G E ++L++ M +P++ T +G+L+ CA G ++ K E++AS G V
Sbjct: 308 GMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV--- 364
Query: 371 EHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ G +VD+ + G + A+ + M + N W +++S+ HG + A K ++
Sbjct: 365 -YVGTALVDMYAKCGSLDNAFRVFYGMP-KKNEVSWNAMISALAFHGQAQEALALFKSMM 422
Query: 430 N 430
N
Sbjct: 423 N 423
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 264/466 (56%), Gaps = 16/466 (3%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCG--------TLNEIKYATKIFNQMRNPSVLLFNSM 71
Q+HA F+ S L+ H S+CG T++EI YA IF ++ V ++N+M
Sbjct: 6 QLHAQFV-----VSGLLNHH--SLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTM 58
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
I+ L + + LF L + PD YT+ +LKAC L G+ VH +II++G
Sbjct: 59 IRGLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGI 118
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
I ++ +YTS G + + V E S + + +N MI G+ KG VDK +F +
Sbjct: 119 SPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQ 178
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M+ + V SW+ +I+ K+G +EAL LF +M +E+ +V++L CA LGA+ G
Sbjct: 179 MKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQG 238
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+WIH+Y + G + + AL+D Y KCG + + F+++PR+++V+W A+ISG A
Sbjct: 239 RWIHAYIDRIGA-DMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAI 297
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G+ + EL+E+M+A G+ PN FV +L+ C+HAG VE+ + F M I P++E
Sbjct: 298 YGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIE 357
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYGCMVD+LGR+G ++EA + I SM +PN+ IWGS+LS+CRTH + A + LI L
Sbjct: 358 HYGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIEL 417
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP + Y L ++ G +A +R + + ++ + G S IE
Sbjct: 418 EPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIE 463
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 244/411 (59%), Gaps = 2/411 (0%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ + S+I AYS ++E V F + + GI PD+ T +L AC + DL +G +H
Sbjct: 205 VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHS 264
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-RDVIVRNLMIHGFCKKGDVD 183
+ G ++ + ++++Y CG +VFD + R N +I G+CK G VD
Sbjct: 265 LVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVD 324
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF +M R ++++N MI+ SG+ EAL LF MR +D TVV++L CA
Sbjct: 325 VARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACA 384
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LGA+ G+ +H+ E L + +G AL+D Y KCG ++ A VF+ + +++V +W
Sbjct: 385 SLGALPQGRALHACIELR-LVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWT 443
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI+GLAFNG G+ G+E + QM G PN +++ VLT C+H+ L+ + R F M L
Sbjct: 444 AMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRIL 503
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
++I P +EHYGCM+D+LGRSG + EA DL+++M ++PN+ IW S+LS+CR H ++LA+
Sbjct: 504 YNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQC 563
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
A + L+ +EP YV L NI + +W+DA +RM M E VKK+ G S
Sbjct: 564 AAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYS 614
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 206/461 (44%), Gaps = 35/461 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+H L+ SN+ L++ V + + + K N + + V+ +NS++ Y+
Sbjct: 916 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 975
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G +E V + G P +F LL GD ++G +HG + + GF
Sbjct: 976 GHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGF------- 1028
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
SC V V+ +I + K D L +F E+ ++
Sbjct: 1029 --------SCSS---------------VHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALE 1065
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG--QWIHS 256
N +I+S + AL + H M + D+ T A + + + + Q +HS
Sbjct: 1066 CCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHS 1125
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
G + ++V ++L+ Y G L ++ +F+ + NV+ + A+IS A G G
Sbjct: 1126 CLVKLG-FEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGA 1184
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL++QM++ G+ P+ TF+ + C AG+ E+ R + M + P+ H+ CM
Sbjct: 1185 RAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACM 1244
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
V++L R G V+EA +++ +R W SLL SC+ HG L + A LI++ +
Sbjct: 1245 VNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDP 1304
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ +SN + + G + A ++ VKKS G SLIE
Sbjct: 1305 ATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS-GHSLIE 1344
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 156/319 (48%), Gaps = 15/319 (4%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAY----SLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
++YA +F++M S LF++ ++A + +G + P LF ++ + PD +TF
Sbjct: 53 LRYALHLFDRM-PASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHF 111
Query: 106 LLKACLGVGDLRVGQC--VHGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMS 162
L K C R C +H +R+ + ++ +YT G D + FDE+
Sbjct: 112 LFK-CSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIP 170
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
+D + ++I G K G + L + R V+SW +I++ ++ R EA+ F
Sbjct: 171 VKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKN 230
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M + D+ TV+ VL C++L +++G +HS + G+ ++ AL+D Y KCG
Sbjct: 231 MLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMS-ENLVVALIDMYAKCG 289
Query: 283 ILDTARNVFKEIPR-KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
AR VF + R + SWNA+I G +G ++ L++QM + + TF ++
Sbjct: 290 DFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDI----ITFNSMI 345
Query: 342 TCCAHAGLVEKARELFASM 360
T H+G + +A LF +M
Sbjct: 346 TGYIHSGQLREALLLFMNM 364
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 39/311 (12%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A +F+QM ++ FNSMI Y +G E + LF ++ + D +T LL A
Sbjct: 323 VDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSA 382
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C +G L G+ +H I E I ++++Y CG++++ VF M RDV
Sbjct: 383 CASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAW 442
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
MI G G +GK+G L F++MR F+
Sbjct: 443 TAMIAGLAFNG--------------------------MGKAG-----LEYFYQMRCDGFQ 471
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTA 287
+ + +AVL C+ ++ G+ + E LY + + ++D + G+LD A
Sbjct: 472 PNPVSYIAVLTACSHSCLLNEGRLY--FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 529
Query: 288 RNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK-ATFVGVLTCCA 345
++ K +P + N V W +++S + R +L E ++ + P++ A +V + C
Sbjct: 530 MDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLK--IEPDEDAVYVQLYNICI 587
Query: 346 HAGLVEKAREL 356
+ E A ++
Sbjct: 588 DSRKWEDASKI 598
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
L LFRE+ ++ N+++ LG E + F +MR Q EL+ + + C +
Sbjct: 847 SLSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQ 906
Query: 245 LGA-VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
G ++ G+ +H +G + + N+LVD Y G +I ++V+SWN
Sbjct: 907 NGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWN 966
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+++S A G + V +QM+ G P+ +FV +L G
Sbjct: 967 SILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTG 1011
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M R V S N MI+ + G A ++ M T +L +C+ A+ +
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL- 815
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
H + GL VG+ALV+ Y + ++F+E+P +N N ++ GL
Sbjct: 816 ---HGRVLALGLCCNPF-VGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGN 871
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG-LVEKARELFASMTGLHSIVPNL 370
E + + M + + N ++ + C G +E+ R+L + I N+
Sbjct: 872 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 931
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMS--IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+VD+ G ++ D +++++ + + W S+LS GH++ A + +K++
Sbjct: 932 FLSNSLVDLYSAIG---DSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQM 988
Query: 429 I 429
+
Sbjct: 989 L 989
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 252/430 (58%), Gaps = 9/430 (2%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N + A ++F+Q+ ++ +N+MI Y+ +G + +LF D +T+ ++
Sbjct: 202 NMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF----EESPVRDVFTWTAMV 257
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
A + G L + V E+ + + + G Y +MD G ++F+EM ++
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQKREMSYNVMIAG----YAQYKRMDMGRELFEEMPFPNIG 313
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N+MI G+C+ GD+ + LF M +R VSW +I+ ++G EA+ + EM+
Sbjct: 314 SWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG 373
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
L+ +T L CA + A+++G+ +H +G Y K VGNALV YCKCG +D A
Sbjct: 374 ESLNRSTFCCALSACADIAALELGKQVHGQVVRTG-YEKGCLVGNALVGMYCKCGCIDEA 432
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+VF+ + K++VSWN M++G A +G G + ++E MI GV P++ T VGVL+ C+H
Sbjct: 433 YDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHT 492
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GL ++ E F SM + I PN +HY CM+D+LGR+GC+ EA +LIR+M P+AA WG+
Sbjct: 493 GLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGA 552
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL + R HG++EL E A + + +EP NSG YVLLSN+YA GRW D +R+ MR+ V
Sbjct: 553 LLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGV 612
Query: 468 KKSPGQSLIE 477
+K+PG S +E
Sbjct: 613 QKTPGYSWVE 622
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 187/415 (45%), Gaps = 42/415 (10%)
Query: 12 RNTRTHLTQIHAHFLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
RN + L + + HK L NL+L + ++ A +F+ M V+ +N+
Sbjct: 76 RNAKFSLARDLFDKMPHKDLFSWNLMLTGYARN----RRLRDARMLFDSMPEKDVVSWNA 131
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
M+ Y +G +E +F + + + ++ LL A + G L E R
Sbjct: 132 MLSGYVRSGHVDEARDVFDRMPH----KNSISWNGLLAAYVRSGRL--------EEARRL 179
Query: 131 FERFGSIRI----GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
FE + ++ Y + D ++FD++ RD+I N MI G+ + GD+ +
Sbjct: 180 FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQAR 239
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
LF E R V +W M+ + + G EA R+F EM Q E+ ++A A+
Sbjct: 240 RLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM-PQKREMSYNVMIAGY---AQYK 295
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+D+G+ + + N ++ YC+ G L ARN+F +P+++ VSW A+I
Sbjct: 296 RMDMGRELFEEMPFPN-----IGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAII 350
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+G A NG E + + +M G S N++TF L+ CA +E +++ +
Sbjct: 351 AGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHG------QV 404
Query: 367 VPNLEHYGC-----MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
V GC +V + + GC+ EAYD+ + + + + W ++L+ HG
Sbjct: 405 VRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAGYARHG 458
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 149/344 (43%), Gaps = 45/344 (13%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G D + VFD M R+ + N MI G+ + LF +M + + SWNLM++
Sbjct: 47 GHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYA 106
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI-----HSYAES-SG 262
++ R +A LF M E D + A+L R G VD + + H + S +G
Sbjct: 107 RNRRLRDARMLFDSMP----EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNG 162
Query: 263 LYRKVVSVG--------------------NALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
L V G N L+ Y K +L AR +F +IP ++++SW
Sbjct: 163 LLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISW 222
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MISG A +G L+E+ + V T+ ++ G++++AR +F M
Sbjct: 223 NTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEARRVFDEMPQ 278
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ Y M+ + + +L M PN W ++S +G +LA+
Sbjct: 279 KREM-----SYNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQNG--DLAQ 330
Query: 423 HAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
+ L ++ P +S ++ + YA+ G +++A + + M+ +
Sbjct: 331 --ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRD 372
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H +R + L+ V + CG ++E A +F +++ ++ +N+M+ Y+
Sbjct: 399 QVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDE---AYDVFQGVQHKDIVSWNTMLAGYA 455
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+G + + +F + G+ PDE T +L AC G
Sbjct: 456 RHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG 493
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 250/433 (57%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A F ++ +++N+MI Y +G E +LF + + I PDE+TF LL
Sbjct: 245 DVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLS 304
Query: 109 ACLGVGDLRVGQCVHGEIIR--SGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
AC G G+ VHG+ IR F ++ + +V LY+ G++ K+FD M+ +
Sbjct: 305 ACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK 364
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ + G +D +F+EM +S +SW +M+S G +AL+LF++MR
Sbjct: 365 DVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMR 424
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T + C LGA+ G+ +H++ G + S GNAL+ Y +CG +
Sbjct: 425 SEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCG-FEASNSAGNALLTMYARCGAV 483
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR VF +P + VSWNAMIS L +G G +EL++QM+A+G+ P++ +F+ +LT C
Sbjct: 484 KDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTAC 543
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
HAGLV+ + F SM I P +HY ++D+LGR+G + EA DLI++M P AI
Sbjct: 544 NHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAI 603
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W ++LS CR +G +EL +A +L + P + G Y+LLSN Y+ GRW DA +R MR+
Sbjct: 604 WEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRD 663
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 664 RGVKKEPGCSWIE 676
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 194/471 (41%), Gaps = 78/471 (16%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC- 121
+L N+MI A++ + V +F L + + PD+Y+F LL A + DL V C
Sbjct: 122 TVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCT 181
Query: 122 -VHGEIIRSGFERFGSIRIGVVELYTSC---GQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+H + + G S+ ++ LY C G D KV DEM +D + ++ G
Sbjct: 182 QLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHV 241
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+KGDV F E+ V WN MIS +SG +EA LF M + DE T +
Sbjct: 242 RKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTS 301
Query: 238 VLPICARLGAVDIGQWIHSY---AESSGLYRKVVSVGNALVDFYCK-------------- 280
+L CA G G+ +H + + + V NALV Y K
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM 361
Query: 281 -----------------CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
G LD A +FKE+P K+ +SW M+SG G E ++L+
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFN 421
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS---------------- 365
QM ++ V P T+ G + C G ++ ++L A + G +
Sbjct: 422 QMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCG 481
Query: 366 ----------IVPNLE--HYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLS 410
++PN++ + M+ LG+ G REA +L M I P+ + ++L+
Sbjct: 482 AVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILT 541
Query: 411 SCRTHGHVELAEHAVKEL---INLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+C G V+ + + + P +Y L ++ GR +A L
Sbjct: 542 ACNHAGLVDDGFQYFESMERDFGISP-GEDHYARLIDLLGRAGRIGEARDL 591
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 157/385 (40%), Gaps = 78/385 (20%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LHG++ ++ F+ N L S G +I ATKIF+ M V+
Sbjct: 312 FLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSG---KIAVATKIFDSMTLKDVVS 368
Query: 68 FNS-------------------------------MIKAYSLNGPSEEPVKLFALLKNLGI 96
+N+ M+ Y G +E+ +KLF +++ +
Sbjct: 369 WNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDV 428
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P +YT+A + AC +G L+ G+ +H +++ GFE S ++ +Y CG + D
Sbjct: 429 KPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARL 488
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF M + D + N M IS+LG+ G EA
Sbjct: 489 VFLVMPNVDSVSWNAM-------------------------------ISALGQHGHGREA 517
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNA-- 273
L LF +M Q D + + +L C G VD G Q+ S G +S G
Sbjct: 518 LELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFG-----ISPGEDHY 572
Query: 274 --LVDFYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGV 330
L+D + G + AR++ K +P + + W A++SG NG ELG +Q+ K V
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLF-KMV 631
Query: 331 SPNKATFVGVLTCCAHAG-LVEKAR 354
+ T++ + + AG V+ AR
Sbjct: 632 PEHDGTYILLSNTYSAAGRWVDAAR 656
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 151/370 (40%), Gaps = 77/370 (20%)
Query: 141 VVELYTSCGQMDDGMKVFDEM--SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V Y G++ D FD + + RD ++ N MI F + + +FR
Sbjct: 95 LVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFR-------- 146
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG--AVDIGQWIHS 256
+L+ S D + D+ + ++L ++ AV +H
Sbjct: 147 --SLLAS-------------------DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHC 185
Query: 257 YAESSGLYRKVVSVGNALVDFYCKC---GILDTARNVFKEIPRKNVVS------------ 301
G V+SV NAL+ Y KC G+ AR V E+P K+ ++
Sbjct: 186 AVHKLGA-GAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKG 244
Query: 302 -------------------WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
WNAMISG +G EL+ +M++K + P++ TF +L+
Sbjct: 245 DVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLS 304
Query: 343 CCAHAGLVEKARELFASMTGLH-SIVPN--LEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
CA+AG + + L VP L +V + +SG + A + SM+++
Sbjct: 305 ACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK 364
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG-NYVLLSNIYAEGGRWDDAETL 458
+ W ++LS G ++ A KE+ P+ S +++++ + Y GG +DA L
Sbjct: 365 -DVVSWNTILSGYIESGCLDNAARIFKEM----PYKSELSWMVMVSGYVHGGLAEDALKL 419
Query: 459 RMWMRENNVK 468
MR +VK
Sbjct: 420 FNQMRSEDVK 429
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H Q+HAH ++ SN +++ +K A +F M N + +N+MI A
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+G E ++LF + GI+PD +F +L A C H ++ GF+ F S
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTA-----------CNHAGLVDDGFQYFES 558
Query: 137 IR--IGV----------VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK-KGDVD 183
+ G+ ++L G++ + + M I C+ GD++
Sbjct: 559 MERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME 618
Query: 184 KGLY----LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
G Y LF+ + E ++ L+ ++ +GR +A R+ MRD+
Sbjct: 619 LGAYAADQLFKMVPEHD-GTYILLSNTYSAAGRWVDAARVRKLMRDR 664
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 271/446 (60%), Gaps = 7/446 (1%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
N ++A +V VCG I A K+F+ + + +++ +NSMI Y+ G +E LF ++
Sbjct: 126 QNALIAVYV-VCGL---IHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMR 181
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G+ PD +TF LL C DL +G+ VH I +G + +R +V++Y CG +
Sbjct: 182 EWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLH 241
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
+FD ++V+ MI + + G ++ +F +M ++VVSWN MIS + G+
Sbjct: 242 SAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQ 301
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS-GLYRKVVSVG 271
EAL LF++MR+ DEAT+V++L C++LG + +G+ IH+Y S+ G Y V++
Sbjct: 302 YREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYG--VTLY 359
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N+L+D Y KCG + TA ++F E+P KN+VSWN +I LA +G G ++L+E+M A G
Sbjct: 360 NSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTL 419
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ T G+L+ C+H+GLV+ F M ++ + +EHY CMVD+LGR G + EA +
Sbjct: 420 PDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIE 479
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
LI M ++P+ +WG+LL +CR HG+VE+ + +K+L+ LEP + G YVL+SNIY E R
Sbjct: 480 LIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQR 539
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
W+D + +R M + +KK S IE
Sbjct: 540 WEDVKKIRKLMIDRGIKKGRAISSIE 565
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 196/435 (45%), Gaps = 73/435 (16%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAY 75
L +HA + H L L L +S C + +++YA ++F+Q+ P+ ++NS+I+ Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S + + V LF + G+ P+E+T +LKAC VHG I+ G
Sbjct: 64 SNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLV 123
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ ++ +Y CG + K+FD+++ + ++ N MI G+ G+ + LFR+MRE
Sbjct: 124 FVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMRE- 182
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
W + E D T V +L +C++ +D+G+++H
Sbjct: 183 ----WGM--------------------------EPDGFTFVNLLSVCSQSRDLDLGRYVH 212
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
E +G+ ++ V NALVD Y KCG L +A+ +F KNVVSW +MIS A +G
Sbjct: 213 FCIEITGVKIDII-VRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSI 271
Query: 316 ELGVELYEQMIAKG-------------------------------VSPNKATFVGVLTCC 344
E+ ++++QM K V P++AT V +L C
Sbjct: 272 EVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAAC 331
Query: 345 AHAG---LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ G + +K S G + + Y ++D+ + G V A D+ M + N
Sbjct: 332 SQLGDLVMGKKIHNYILSNKGAYGVTL----YNSLIDMYAKCGPVVTALDIFLEMPGK-N 386
Query: 402 AAIWGSLLSSCRTHG 416
W ++ + HG
Sbjct: 387 LVSWNVIIGALALHG 401
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 21/301 (6%)
Query: 176 FC---KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
FC GD+ +F ++ + + +N +I S +A+ LF M +E
Sbjct: 29 FCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNE 88
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ VL C A +H A G+ +V V NAL+ Y CG++ AR +F
Sbjct: 89 FTLPFVLKACGCKSAYWEAVLVHGLAIKLGI-GSLVFVQNALIAVYVVCGLIHCARKLFD 147
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+I K +VSWN+MI G A G + L+ +M G+ P+ TFV +L+ C+ + ++
Sbjct: 148 DITDKTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDL 207
Query: 353 AR--ELFASMTG--LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
R +TG + IV N +VD+ + G + A I + N W S+
Sbjct: 208 GRYVHFCIEITGVKIDIIVRN-----ALVDMYAKCGNLHSA-QAIFDRTQEKNVVSWTSM 261
Query: 409 LSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+S+ HG +E+A ++ N+ WNS + + Y G++ +A L MR +
Sbjct: 262 ISAYAQHGSIEVARQIFDQMPGKNVVSWNS-----MISCYLREGQYREALDLFNKMRNSR 316
Query: 467 V 467
V
Sbjct: 317 V 317
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH + L +K + + + + A IF +M +++ +N +I A +L+G
Sbjct: 342 KIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHG 401
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
E +KLF ++ G PDE T LL AC G + +G
Sbjct: 402 CGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/529 (34%), Positives = 268/529 (50%), Gaps = 72/529 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q H LR LHQ ++ + +YAT +F Q +P++ L+N++I+ N
Sbjct: 21 QCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSND 80
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD-LRVGQCVHGEIIRSGFERFGSIR 138
+ V ++A ++ G PD +TF +LKAC + VG +H +I++GF+ ++
Sbjct: 81 AFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVK 140
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR-------- 190
G+V LY+ G + D KVFDE+ ++V+ +I G+ + G + L LFR
Sbjct: 141 TGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLR 200
Query: 191 ---------------------------EMRERSVVSWNLMISSL----GKSGRDSEALRL 219
MRE V + +SL K G EA R+
Sbjct: 201 PDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRV 260
Query: 220 F------------------------HEMRDQAFELDEATV-------VAVLPICARLGAV 248
F E D FE+ V V V C+RLGA+
Sbjct: 261 FDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGAL 320
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
++G W + V +G AL+DFY KCG + A+ VFK + RK+ V +NA+ISG
Sbjct: 321 ELGNWARGLMDGDEFLSNPV-LGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISG 379
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
LA G ++ QM+ G+ P+ TFVG+L C HAGLV+ F+ M+ + S+ P
Sbjct: 380 LAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTP 439
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+EHYGCMVD+ R+G + EA DLIRSM + N+ +WG+LL CR H +LAEH +K+L
Sbjct: 440 TIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQL 499
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
I LEPWNSG+YVLLSNIY+ RWD+AE +R + + ++K PG S +E
Sbjct: 500 IELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVE 548
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 258/442 (58%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
L H + G+L + + ++F +M + +V+ +N+MI + G + E LF ++ G
Sbjct: 148 LLHSSASAGSLRDSR---RLFAEMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQG 204
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ D +TF LL C G+L VG+ VH ++ SG + +V++Y CG +
Sbjct: 205 VLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAH 264
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+ FD M ++V+ M+ K G VD F +M ER+++SWN MIS + GR E
Sbjct: 265 RCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPE 324
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L L++ M+ DE T+ VL + + G + G+ IH Y + S V+V N+L+
Sbjct: 325 TLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDS-FSDPGVTVLNSLI 383
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y +CG +DT+ ++F E+P KN +SWN +I LA +GR + V + M++ SP++
Sbjct: 384 DMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEI 443
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TFVG+L+ C+H GL+E + F +M ++++ P +EHY CMVD+LGR G + +A DLI+
Sbjct: 444 TFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKD 503
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M ++P+ +WG+L+ +CR HGHVE+ + A+K+L+ LE N G +VL+SN+ E +W+D
Sbjct: 504 MPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDM 563
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+ LR MR+ KK G S IE
Sbjct: 564 KRLRKLMRDRGTKKDMGVSSIE 585
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 228/505 (45%), Gaps = 76/505 (15%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL----AHFVSVCGTLNEIK--YATKIFN 58
+L LL + HL Q+HAH L H ++ A + ++ G ++ +A ++F+
Sbjct: 6 VLELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFD 65
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
++ +P +NS+I+AYS +G +E + L + GI P+E+T +LKAC
Sbjct: 66 RVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEH 125
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFC 177
HG I+ G+ R + ++ S G + D ++F EM+ HR+V+ N MI G
Sbjct: 126 ALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCA 185
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+ G+ + LFREMR + V++ D T V+
Sbjct: 186 QAGETSEACALFREMRRQGVLA-------------------------------DVFTFVS 214
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL------------- 284
+L +C++ G +++G+ +H + +SG R + +GNALVD Y KCG L
Sbjct: 215 LLLVCSKEGNLEVGRLVHCHMLASG-SRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIK 273
Query: 285 ------------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
D AR+ F+++P +N++SWNAMIS GR + LY +M
Sbjct: 274 NVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMK 333
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+ G++P++ T GVL+ G + R + + S P + ++D+ R G V
Sbjct: 334 SLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSD-PGVTVLNSLIDMYARCGQV 392
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSN 444
+ L M + N W ++ + HG + A + +++ P + +V L +
Sbjct: 393 DTSISLFTEMPNK-NTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSP-DEITFVGLLS 450
Query: 445 IYAEGGRWDDAETLRMWMRE-NNVK 468
+ GG +D + MR NVK
Sbjct: 451 ACSHGGLLEDGQYYFKAMRHIYNVK 475
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/479 (36%), Positives = 270/479 (56%), Gaps = 14/479 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKL--HQ--SNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
LL + + Q+HA + L H +N +L S+ I YA +F+ P
Sbjct: 7 LLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLSSI---FAPISYAHMVFDHFPQP 63
Query: 64 SVLLFNSMIK--AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC-LGVGDLRVGQ 120
+ L+N++IK A+S ++ K +L++ + P++Y+FA K C GVG L G+
Sbjct: 64 DLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLE-GE 122
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
V I+ G E + ++ +Y + + D KVFD +RD+ N+M+ G+ + G
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+D+ LF EM E+ VVSW MIS + G EAL +FH M + +E T+ + L
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLA 242
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KN 298
CA L A+D G+W+H Y + + + + L+D Y KCG L+ A +F PR +
Sbjct: 243 ACANLVALDQGRWMHVYIKKNNIQMNERLLA-GLIDMYAKCGELEFASKLFNSNPRLKRK 301
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V WNAMI G A +G+ + +E++EQM + VSPNK TFV +L C+H VE+ R F
Sbjct: 302 VWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFE 361
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + + P LEHYGC+VD+LGR+G ++EA ++I SM + P+ AIWG+LLS+C+ H
Sbjct: 362 SMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDA 421
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+ E K + L+P + G +VLL+NIY+ G W++A TLR + E+ KK+PG S IE
Sbjct: 422 EMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIE 480
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 263/458 (57%), Gaps = 34/458 (7%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H +R L + + +++ ++ A K+F+++ ++ +NSMI YS +
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHA 209
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
E V LF + G P+E + +L AC +GDL++G V E F V
Sbjct: 210 GEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV---------EEF------V 254
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
VE ++M+ + + + +IH + K GD+ +F M+++ V+WN
Sbjct: 255 VE---------------NKMT-LNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWN 298
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
MI+ ++G EA++LF +MR + D+ T++ +L CA +GA+D+G+ + YA
Sbjct: 299 AMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER 358
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
G ++ V VG ALVD Y KCG LD A VF +P KN VSWNAMIS LAF+G+ + + L
Sbjct: 359 G-FQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALAL 417
Query: 322 YEQMIAKG--VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ M+ +G VSPN TFVGVL+ C HAGLV++ R LF M+ +VP +EHY CMVD+
Sbjct: 418 FKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDL 477
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
R+G + EA+D + +M +P+ I G+LL +C+ +++++E +K L+ LEP NSGNY
Sbjct: 478 FSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNY 537
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+ S +YA RWDD+ +RM M++ V K+PG S I+
Sbjct: 538 VISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWID 575
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 208/421 (49%), Gaps = 51/421 (12%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L QIHA L + +H+ N F+ L + YA+ F+ + +P+ FN MI+ S
Sbjct: 47 QLKQIHAQLLTNSIHKPN----SFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLS 102
Query: 77 LN-GPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC---LGVGDLRVGQCVHGEIIRSGFE 132
S ++ ++ +K LG+ P+ T+ L AC L V + R+G C +IR G +
Sbjct: 103 TAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHC---SVIRRGLD 159
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
G + ++ +Y CG+M D KVFDE+S +D+
Sbjct: 160 EDGHVSHSLITMYARCGKMGDARKVFDEISQKDL-------------------------- 193
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
VSWN MIS K EA+ LF EM + F+ +E ++V+VL C LG + +G
Sbjct: 194 -----VSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGT 248
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
W+ + + + +G+AL+ Y KCG L +AR +F + +K+ V+WNAMI+G A N
Sbjct: 249 WVEEFVVENKMTLNYF-MGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN 307
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE--KARELFASMTGLHSIVPNL 370
G E ++L++ M +P++ T +G+L+ CA G ++ K E++AS G V
Sbjct: 308 GMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDV--- 364
Query: 371 EHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ G +VD+ + G + A+ + M + N W +++S+ HG + A K ++
Sbjct: 365 -YVGTALVDMYAKCGSLDNAFRVFYGMPNK-NEVSWNAMISALAFHGQAQEALALFKSMM 422
Query: 430 N 430
N
Sbjct: 423 N 423
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/472 (37%), Positives = 255/472 (54%), Gaps = 4/472 (0%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLH--QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LL T L +IHA L H LH Q ++ F S A ++F+++ +P +
Sbjct: 26 LLTQCKTIRELQRIHAQALTHGLHPNQQSISCKIFRSY-AEFGRPADAGRLFDEIPHPDI 84
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+ F S++ + + + +F+ G PD + L A G+GD R+G VHG
Sbjct: 85 ISFTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGL 144
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I R G + + +V++Y CG+ + VFD M +D + M++G+ K VD
Sbjct: 145 IFRCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSA 204
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
L F +M +S VSW +I+ + + +AL LF +M + + T+V VL CA +
Sbjct: 205 LSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADI 264
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+G+ IH Y S ++ V NAL+D Y K G + +A +VF+E+ K+ +W M
Sbjct: 265 GALDLGRAIHGYGSKSNATTNII-VTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTM 323
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS G G VEL+ M+ G+ PN TFV VL+ C+HAGL+++ RELF M ++
Sbjct: 324 ISSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYH 383
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P LEHYGCMVD+LGR G + EA LI M + P+ IW SLLS+C HG+ LAE A
Sbjct: 384 IDPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAG 443
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+I EP + G YVLL N+YA RW +A +R M + K PG S IE
Sbjct: 444 MEIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIE 495
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 251/439 (57%), Gaps = 5/439 (1%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
VS+ L + A +F M + S++ +N+MI Y+ NG + +KLF+ +L + P
Sbjct: 130 MVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP 189
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
DE+T +L AC +G++R+G+ VH I+R+ + ++ Y G +++ ++
Sbjct: 190 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 249
Query: 159 DEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D+ D VI ++ G+ K GD++ +F M R VV+W MI ++GR+ EA
Sbjct: 250 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 309
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF M E + T+ AVL +CA L +D G+ IH A S L + SV NA++
Sbjct: 310 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQSSSVSNAIIT 368
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y + G AR +F ++ RK ++W +MI LA +G+GE V L+E+M+ GV P++
Sbjct: 369 MYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRI 428
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+VGVL+ C+HAG V + + + + H I P + HY CMVD+L R+G EA + IR
Sbjct: 429 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 488
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+A WGSLLS+CR H + ELAE A ++L++++P NSG Y ++N+Y+ GRW DA
Sbjct: 489 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 548
Query: 456 ETLRMWMRENNVKKSPGQS 474
+ +E V+K G S
Sbjct: 549 ARIWKARKEKAVRKETGFS 567
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 187/420 (44%), Gaps = 44/420 (10%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F +M + + M+ + G E +K + G P ++T +L +C
Sbjct: 11 ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAV 70
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
VG+ VH +++ G + V+ +Y CG + VF+ M R V N M
Sbjct: 71 TQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAM 130
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
+ G +D LF M +RS+VSWN MI+ ++G D++AL+LF M + + D
Sbjct: 131 VSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 190
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGL-------------YRKVVSVGN------ 272
E T+ +VL CA LG V IG+ +H+Y + + Y K SV N
Sbjct: 191 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 250
Query: 273 -------------ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
AL++ Y K G +++AR +F + ++VV+W AMI G NGR + +
Sbjct: 251 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 310
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL----FASMTGLHSIVPNLEHYGC 375
+L+ MI G PN T VL+ CA ++ +++ S+ S V N
Sbjct: 311 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN-----A 365
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEP 433
++ + RSG A + + R W S++ + HG E A +E++ +EP
Sbjct: 366 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 425
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 12/251 (4%)
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
F K G + +F EM ER VSW +M+ L ++GR EA++ +M F + T+
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
VL CA A +G+ +HS+ GL V V N++++ Y KCG +TA VF+ +P
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGL-GSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++V SWNAM+S GR +L L+E M + + A G GL KA +
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGY----NQNGLDAKALK 176
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR-----EAYDLIRSMSIRPNAAIWGSLLS 410
LF+ M S+ P+ ++ G VR AY L M+ N+ + +L+S
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAY--NSQVTNALIS 234
Query: 411 SCRTHGHVELA 421
+ G VE A
Sbjct: 235 TYAKSGSVENA 245
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLN 78
QIH +R L QS+ + +++ +A ++F+Q+ + + SMI A + +
Sbjct: 346 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 405
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
G EE V LF + G+ PD T+ +L AC G + G+ + +I
Sbjct: 406 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI 453
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 257/475 (54%), Gaps = 45/475 (9%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
++ +N R L H F R H+ + ++ + I+ A ++F+++ V+ +
Sbjct: 110 MYAQNGR--LEDAHKVFDRSS-HRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSW 166
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+MI Y+ G +E ++LF + + PDE T +L AC + +G+ VH I
Sbjct: 167 NAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDD 226
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
GF I +++LY+ CGQ++ +F+ +S CK
Sbjct: 227 HGFGSNLKIVNALIDLYSKCGQVETACGLFEGLS--------------CK---------- 262
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
VVSWN +I EAL LF EM ++ T+V++LP CA LGA+
Sbjct: 263 -------DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGILDTARNVFKEIPRKNVVSW 302
DIG+WIH Y + +K+ V NA L+D Y KCG ++ A VF + K++ SW
Sbjct: 316 DIGRWIHVYID-----KKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
NAMI G A +GR G +L+ +M G+ P+ TFVG+L+ C+H+G ++ R +F SMT
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P LEHYGCM+D+LG SG +EA ++I++M + P+ IW SLL +CR HG++ELAE
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAE 490
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L+ +EP N G+YVLLSNIYA G WD+ +R + +KK PG S IE
Sbjct: 491 SFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIE 545
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 205/381 (53%), Gaps = 3/381 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L F + + YA +F ++ P+ L++N+M++ Y+L+ +KL+ ++ +LG+
Sbjct: 3 LLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGL 62
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ YTF LLK+C GQ +HG +++ G+E + ++ +Y G+++D K
Sbjct: 63 LPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHK 122
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD SHRDV+ +I G+ G++ +F E+ + VVSWN MIS ++G EA
Sbjct: 123 VFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEA 182
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF EM DE T+V VL CA+ +V++G+ +HS+ + G + + + NAL+D
Sbjct: 183 LELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG-FGSNLKIVNALID 241
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG ++TA +F+ + K+VVSWN +I G + + L+++M+ G SPN T
Sbjct: 242 LYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVT 301
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY-GCMVDVLGRSGCVREAYDLIRS 395
V +L CAH G ++ R + + V N ++D+ + G + A+ + S
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361
Query: 396 MSIRPNAAIWGSLLSSCRTHG 416
M + + + W +++ HG
Sbjct: 362 M-LHKSLSSWNAMIFGFAMHG 381
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 264/481 (54%), Gaps = 40/481 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMR 61
+L L+ + HL QIHA LR L +++ + HF+S +I Y+ ++F+Q
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NP++ N+MI+A+SL+ E +LF +L +N + + + + LK C+ GDL G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+HG+I GF + +++LY++C D KVFDE+ RD
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT-------------- 179
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---DQAFELDEATVVA 237
VSWN++ S ++ R + L LF +M+ D + D T +
Sbjct: 180 -----------------VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLL 222
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
L CA LGA+D G+ +H + + +GL +++ N LV Y +CG +D A VF + +
Sbjct: 223 ALQACANLGALDFGKQVHDFIDENGL-SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
NVVSW A+ISGLA NG G+ +E + +M+ G+SP + T G+L+ C+H+GLV + F
Sbjct: 282 NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFF 341
Query: 358 ASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
M +G I PNL HYGC+VD+LGR+ + +AY LI+SM ++P++ IW +LL +CR HG
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VEL E + LI L+ +G+YVLL N Y+ G+W+ LR M+E + PG S I
Sbjct: 402 DVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Query: 477 E 477
E
Sbjct: 462 E 462
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 261/472 (55%), Gaps = 4/472 (0%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L LL + + QIH H + + + + ++ A ++F QM P
Sbjct: 133 FLFLLQASKFLSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPD 192
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ FN MI Y+ G + E +K + LG+ PDE+T LL C +GD ++G+ VH
Sbjct: 193 AVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHA 252
Query: 125 EIIRSGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
I R G + ++ + ++++Y C ++ +F+ + +D I N MI G+ K G++
Sbjct: 253 WIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNL 312
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ F +M R +VSWN +I+ + G RLF M + D T++ ++
Sbjct: 313 EIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAA 372
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A +GA+ G+WIH + + + +G+A +D Y KCG + A VF+E+ K+V W
Sbjct: 373 AEIGALHHGRWIHGWVVRMQM-KIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVW 431
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
MI+G AF+G G ++L+ +M + V PN+ TFV VLT C+H+G V + +F SM
Sbjct: 432 TTMITGFAFHGYGSKALQLFYEM-QEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKE 490
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EHYGC+VD+LGRSG E D+I M ++P+ +IWG++LS+CR +G++E+AE
Sbjct: 491 RYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAE 550
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
A KEL+ LEP G YVLLSNIYA GRW ++ +R M VKK+ G S
Sbjct: 551 IAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCS 602
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 276/520 (53%), Gaps = 56/520 (10%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-----GTLNEIKYATKIFNQM 60
+ LL + L QIH+H ++ L L ++ C G +N YA ++F+ +
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMN---YAHQVFDTI 67
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+PS+ ++N+MIK YS E V ++ L+ I PD +TF LK L+ G+
Sbjct: 68 PHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGK 127
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF---- 176
+ ++ GF+ ++ + +++ CG +D KVFD +V+ N+M+ G+
Sbjct: 128 ELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVK 187
Query: 177 -------------CKK--------------------------GDVDKGLYLFREMRERSV 197
C K G++D+ +F M+ R V
Sbjct: 188 QFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDV 247
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSW MI + AL LF EM+ + DE T+V++L CA LGA+++G+W+ +
Sbjct: 248 VSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTC 307
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + + VGNALVD Y KCG + A+ VFKE+ +K+ +W MI GLA NG GE
Sbjct: 308 IDKNS-NKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEE 366
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ ++ MI V+P++ T++GVL C +V+K + F +MT H I P + HYGCMV
Sbjct: 367 ALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMV 422
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LG GC+ EA ++I +M ++PN+ +WGS L +CR H +V+LA+ A K+++ LEP N
Sbjct: 423 DLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGA 482
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL NIYA +W++ +R M E +KK+PG SL+E
Sbjct: 483 VYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLME 522
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 251/439 (57%), Gaps = 5/439 (1%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
VS+ L + A +F M + S++ +N+MI Y+ NG + +KLF+ +L + P
Sbjct: 236 MVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP 295
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
DE+T +L AC +G++R+G+ VH I+R+ + ++ Y G +++ ++
Sbjct: 296 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 355
Query: 159 DEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D+ D VI ++ G+ K GD++ +F M R VV+W MI ++GR+ EA
Sbjct: 356 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 415
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF M E + T+ AVL +CA L +D G+ IH A S L + SV NA++
Sbjct: 416 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS-LLEQSSSVSNAIIT 474
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y + G AR +F ++ RK ++W +MI LA +G+GE V L+E+M+ GV P++
Sbjct: 475 MYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRI 534
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+VGVL+ C+HAG V + + + + H I P + HY CMVD+L R+G EA + IR
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 594
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+A WGSLLS+CR H + ELAE A ++L++++P NSG Y ++N+Y+ GRW DA
Sbjct: 595 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654
Query: 456 ETLRMWMRENNVKKSPGQS 474
+ +E V+K G S
Sbjct: 655 ARIWKARKEKAVRKETGFS 673
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 187/420 (44%), Gaps = 44/420 (10%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F +M + + M+ + G E +K + G P ++T +L +C
Sbjct: 117 ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAV 176
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
VG+ VH +++ G + V+ +Y CG + VF+ M R V N M
Sbjct: 177 TQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAM 236
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
+ G +D LF M +RS+VSWN MI+ ++G D++AL+LF M + + D
Sbjct: 237 VSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 296
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGL-------------YRKVVSVGN------ 272
E T+ +VL CA LG V IG+ +H+Y + + Y K SV N
Sbjct: 297 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 356
Query: 273 -------------ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
AL++ Y K G +++AR +F + ++VV+W AMI G NGR + +
Sbjct: 357 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 416
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL----FASMTGLHSIVPNLEHYGC 375
+L+ MI G PN T VL+ CA ++ +++ S+ S V N
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN-----A 471
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEP 433
++ + RSG A + + R W S++ + HG E A +E++ +EP
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 156/330 (47%), Gaps = 18/330 (5%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS----CGQMDDGMKVF 158
+A LL+ C + G+ +H +++G + ++ Y G + D ++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 159 DE--MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
DE ++ R+V N ++ F K G + +F EM ER VSW +M+ L ++GR EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
++ +M F + T+ VL CA A +G+ +HS+ GL V V N++++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL-GSCVPVANSVLN 207
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +TA VF+ +P ++V SWNAM+S GR +L L+E M + + A
Sbjct: 208 MYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAM 267
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR-----EAYD 391
G GL KA +LF+ M S+ P+ ++ G VR AY
Sbjct: 268 IAGY----NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI 323
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
L M+ N+ + +L+S+ G VE A
Sbjct: 324 LRTEMAY--NSQVTNALISTYAKSGSVENA 351
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLN 78
QIH +R L QS+ + +++ +A ++F+Q+ + + SMI A + +
Sbjct: 452 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
G EE V LF + G+ PD T+ +L AC G + G+ + +I
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI 559
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 250/439 (56%), Gaps = 5/439 (1%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
VS+ L + A +F M S++ +N+MI Y+ NG + +KLF+ +L + P
Sbjct: 236 MVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP 295
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
DE+T +L AC +G++R+G+ VH I+R+ + ++ Y G +++ ++
Sbjct: 296 DEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIM 355
Query: 159 DEMSHRD--VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D+ D VI ++ G+ K GD++ +F M R VV+W MI ++GR+ EA
Sbjct: 356 DQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEA 415
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF M E + T+ AVL +CA L +D G+ IH A S L R SV NA++
Sbjct: 416 IDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSS-SVSNAIIT 474
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y + G AR +F ++ RK ++W +MI LA +G+GE V L+E+M+ GV P++
Sbjct: 475 MYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRI 534
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+VGVL+ C+HAG V + + + + H I P + HY CMVD+L R+G EA + IR
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRR 594
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+A WGSLLS+CR H + ELAE A ++L++++P NSG Y ++N+Y+ GRW DA
Sbjct: 595 MPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDA 654
Query: 456 ETLRMWMRENNVKKSPGQS 474
+ +E V+K G S
Sbjct: 655 ARIWKARKEKAVRKETGFS 673
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 186/420 (44%), Gaps = 44/420 (10%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F +M + + M+ + G E +K + G P ++T +L +C
Sbjct: 117 ARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAV 176
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
VG+ VH +++ G + V+ +Y CG + VF+ M R V N M
Sbjct: 177 TQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAM 236
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
+ G +D LF M RS+VSWN MI+ ++G D++AL+LF M + + D
Sbjct: 237 VSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPD 296
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGL-------------YRKVVSVGN------ 272
E T+ +VL CA LG V IG+ +H+Y + + Y K SV N
Sbjct: 297 EFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMD 356
Query: 273 -------------ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
AL++ Y K G +++AR +F + ++VV+W AMI G NGR + +
Sbjct: 357 QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAI 416
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL----FASMTGLHSIVPNLEHYGC 375
+L+ MI G PN T VL+ CA ++ +++ S+ S V N
Sbjct: 417 DLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSN-----A 471
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEP 433
++ + RSG A + + R W S++ + HG E A +E++ +EP
Sbjct: 472 IITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 156/330 (47%), Gaps = 18/330 (5%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS----CGQMDDGMKVF 158
+A LL+ C + G+ +H +++G + ++ Y G + D ++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 159 DE--MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
DE ++ R+V N ++ F K G + +F EM ER VSW +M+ L ++GR EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
++ +M F + T+ VL CA A +G+ +HS+ GL V V N++++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGL-GSCVPVANSVLN 207
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +TA VF+ +P ++V SWNAM+S GR +L L+E M + + A
Sbjct: 208 MYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAM 267
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR-----EAYD 391
G GL KA +LF+ M S+ P+ ++ G VR AY
Sbjct: 268 IAGY----NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI 323
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
L M+ N+ + +L+S+ G VE A
Sbjct: 324 LRTEMAY--NSQVTNALISTYAKSGSVENA 351
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLN 78
QIH +R L +S+ + +++ +A ++F+Q+ + + SMI A + +
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
G EE V LF + G+ PD T+ +L AC G + G+ + +I
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI 559
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 243/427 (56%), Gaps = 34/427 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A K+F+++ V+ +N+MI Y+ G +E ++LF + + + PDE T A +L C
Sbjct: 163 AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTH 222
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
G++ +G+ +H I GF + +++LY+ CG+M+
Sbjct: 223 SGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA------------------ 264
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
HG LF ++ + V+SWN +I EAL +F EM ++
Sbjct: 265 -HG------------LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPND 311
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESS--GLYRKVVSVGNALVDFYCKCGILDTARNV 290
T++++LP CA LGA+DIG+WIH Y + G+ S+ +L+D Y KCG ++ A V
Sbjct: 312 VTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNT-SLQTSLIDMYAKCGNIEAANQV 370
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F I K++ S NAMI G A +GR + +L +M G+ P+ TFVG+L+ C+HAGL
Sbjct: 371 FDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLS 430
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+ R++F SMT + I P LEHYGCM+D+LGRSG +EA +LI SM++ P+ IWGSLL
Sbjct: 431 DLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLK 490
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+C+ H ++EL E ++L+ +EP N G+YVLLSNIYA RWDD +R + + +KK
Sbjct: 491 ACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKV 550
Query: 471 PGQSLIE 477
PG S IE
Sbjct: 551 PGCSSIE 557
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 209/385 (54%), Gaps = 9/385 (2%)
Query: 30 LHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVK 86
LH +N L+ + C + + YA +F ++ P+ L +N+MI+ ++L+ +
Sbjct: 5 LHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALN 64
Query: 87 LFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYT 146
L+ + +LG+ P+ YTF L K+C + G+ +H +I++ G + ++ +Y
Sbjct: 65 LYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYA 124
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
G ++D KVFD SHRDV+ MI G+ +G++DK +F E+ + VVSWN MIS
Sbjct: 125 QNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISG 184
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
+ GR EAL LF+EM + DE+T+ VL C G V++G+ IHS+ ++ G
Sbjct: 185 YAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSN 244
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ V NAL+D Y KCG ++ A +F+ + K+V+SWN +I G A+ + + ++++M+
Sbjct: 245 LKLV-NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEML 303
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASM-TGLHSIVPNLEHYGCMVDVLGRSGC 385
G +PN T + +L CAH G ++ R + + L I+ N ++D+ + G
Sbjct: 304 KLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGN 363
Query: 386 VREA---YDLIRSMSIRP-NAAIWG 406
+ A +D I + S+ NA I+G
Sbjct: 364 IEAANQVFDTILNKSLSSCNAMIFG 388
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 274/504 (54%), Gaps = 40/504 (7%)
Query: 13 NTRTHLTQIHAHFLRHKLHQS-----NLILAHFVSVCG---TLNEIKYATKIFNQMRNPS 64
N +T L QIHA + + + + +L+L S+ G T YA ++F Q+ P
Sbjct: 14 NLKT-LKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPD 72
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++N MI+ S + + L+ + + D YTF +LKAC + + G VHG
Sbjct: 73 TFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHG 132
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++R GF +R ++ + CG ++ +FD+ DV+ + +I G+ ++GD+
Sbjct: 133 MVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKV 192
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE--------------------MR 224
LF EM ER +VSWN+MI+ K G A LF E +
Sbjct: 193 ARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLS 252
Query: 225 DQAFEL-----------DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
QA EL DE T++++L CA LG ++ G+ +H+ + + +GNA
Sbjct: 253 KQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNA 312
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG + + +VF I K+V+SWN++I G+A +G G+ + L++ M + PN
Sbjct: 313 LIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPN 372
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TFVGVL C+HAG +++ + F M+ + I PN+ H GCMVD+LGR+G ++EA I
Sbjct: 373 EITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFI 432
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
SM I PNA IW +LL++C+ HG VELA+ A ++L ++ +SG+YVL+SN+YA G WD
Sbjct: 433 DSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWD 492
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
AE +R M ++ V K G S +E
Sbjct: 493 GAEKVRKLMDDSGVTKIRGSSFVE 516
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 222/357 (62%), Gaps = 2/357 (0%)
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCKKG 180
+H ++R+G +V+ Y SCG + +VFDE + DV+ N+MI G+ K G
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSG 156
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D+ + LF M R+VVSW ++I + + + EA+ +F M+ + E D +++VL
Sbjct: 157 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 216
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C LG VD+G+W+H + GL +++ + NA++D Y KCG + A VF+ + +K++V
Sbjct: 217 ACGDLGVVDLGEWVHRFVLRRGLCQEI-PLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+W MI+G A +G G VEL+ +M + VSPN TF+ VL+ C+H GL + R F +M
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EHYGCM+D+LGR+GC+ EA LI+ M + NAAIWG+LL++ RTHG EL
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 395
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A+ LI LEP NSGNY+LLSNIYAE RWD LR+ MR+ ++ PG S I+
Sbjct: 396 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSID 452
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 35/314 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M +V+ + +I AY+ EE +++F ++ GI PD +L
Sbjct: 157 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 216
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G + +G+ VH ++R G + + ++++Y CG + ++VF+ M + ++
Sbjct: 217 ACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVT 276
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
MI GF G GL EA+ LF M +
Sbjct: 277 WTTMIAGFALHG---LGL----------------------------EAVELFRRMEKENV 305
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
++ T +AVL +C+ +G D+G+W S + V ++D + G L AR
Sbjct: 306 SPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEAR 365
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATFVGVLTCCAH 346
+ +++P K N W A+++ +G ELG + +I + P N ++ + A
Sbjct: 366 GLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIE--LEPHNSGNYILLSNIYAE 423
Query: 347 AGLVEKARELFASM 360
+ REL SM
Sbjct: 424 QERWDAVRELRISM 437
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H LR L Q ++ + + +K A ++F M S++ + +MI ++L+G
Sbjct: 230 VHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGL 289
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
E V+LF ++ + P++ TF +L C VG +G+
Sbjct: 290 GLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGR 329
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 42/435 (9%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+I+ A K+F+++ V+ +N+MI Y+ G +E ++LF + + + PDE T+ +L
Sbjct: 145 DIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLS 204
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G + +G+ VH + GF+ I +++LY+ CG+
Sbjct: 205 ACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGE------------------ 246
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
V+ LF+ + + V+SWN +I EAL LF EM
Sbjct: 247 -------------VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 293
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCG 282
++ T+++VLP CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYID-----KRLKGVTNASSLRTSLIDMYAKCG 348
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
++ A VF + K++ SWNAMI G A +GR + +L+ +M G+ P+ TFVG+L+
Sbjct: 349 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLS 408
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C+H+G+++ R +F SMT + + P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 409 ACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDG 468
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
IW SLL +C+ HG+VELAE + LI +EP N +Y+LLSNIYA GRW+D +R +
Sbjct: 469 VIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALL 528
Query: 463 RENNVKKSPGQSLIE 477
+KK PG S IE
Sbjct: 529 NGKCMKKVPGCSSIE 543
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 209/387 (54%), Gaps = 5/387 (1%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ YAT +F ++ P+ L++N+MI+ ++L+ + L+ + +LG+ P+ YTF LLK+
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C GQ +HG++++ GF+ + ++ +Y +++D KVFD SHRDV+
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+I G+ +GD+ LF E+ + VVSWN MIS ++G EAL LF EM
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
DE+T V VL CA G++++G+ +HS+ + G + + + NAL+D Y KCG ++TA
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHG-FDSNLKIVNALIDLYSKCGEVETACG 252
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F+ + K+V+SWN +I G + + L+++M+ G +PN T + VL CAH G
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 350 VEKARELFASMTGLHSIVPNLEHY-GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
++ R + + V N ++D+ + G + A+ + SM + + + W ++
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAM 371
Query: 409 LSSCRTHGHVELAEHAVKEL--INLEP 433
+ HG + + + I +EP
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEP 398
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 279/497 (56%), Gaps = 39/497 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAY 75
L +HA + H L L L +S C + +++YA ++F+Q+ P+ ++NS+I+ Y
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLIRGY 63
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC------------------LGVGDLR 117
S + + V LF + G+ P+E+T +LKAC LG+G L
Sbjct: 64 SNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLV 123
Query: 118 VGQ---------CVHGEIIRSGFERFGS-------IRIGVVELYTSCGQMDDGMKVFDEM 161
Q C R F+ +R +V++Y CG + +FD
Sbjct: 124 FVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRT 183
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
++V+ MI + + G ++ +F +M ++VVSWN MIS + G+ EAL LF+
Sbjct: 184 QEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFN 243
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS-GLYRKVVSVGNALVDFYCK 280
+MR+ DEAT+V++L C++LG + +G+ IH+Y S+ G Y V++ N+L+D Y K
Sbjct: 244 KMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYG--VTLYNSLIDMYAK 301
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG + TA ++F E+P KN+VSWN +I LA +G G ++L+E+M A G P++ T G+
Sbjct: 302 CGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGL 361
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L+ C+H+GLV+ F M ++ + +EHY CMVD+LGR G + EA +LI M ++P
Sbjct: 362 LSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKP 421
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
+ +WG+LL +CR HG+VE+ + +K+L+ LEP + G YVL+SNIY E RW+D + +R
Sbjct: 422 DVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRK 481
Query: 461 WMRENNVKKSPGQSLIE 477
M + +KK S IE
Sbjct: 482 LMIDRGIKKGRAISSIE 498
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 244/411 (59%), Gaps = 2/411 (0%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ + S+I AYS ++E V F + + GI PD+ T +L AC + DL +G +H
Sbjct: 143 VISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHL 202
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-RDVIVRNLMIHGFCKKGDVD 183
+ G ++ + ++++Y CG +VFD + R N +I G+CK G VD
Sbjct: 203 LVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVD 262
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF +M R ++++N MI+ SG+ EAL LF MR +D TVV++L CA
Sbjct: 263 VARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACA 322
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LGA+ G+ +H+ E L + +G AL+D Y KCG ++ A VF+ + +++V +W
Sbjct: 323 SLGALPQGRALHACIELR-LVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWT 381
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI+GLAFNG G+ G+E + QM G PN +++ VLT C+H+ L+ + R F M L
Sbjct: 382 AMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRIL 441
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
++I P +EHYGCM+D+LGRSG + EA DL+++M ++PN+ IW S+LS+CR H ++LA+
Sbjct: 442 YNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQC 501
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
A + L+ +EP YV L NI + +W+DA +RM M E VKK+ G S
Sbjct: 502 AAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYS 552
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 210/462 (45%), Gaps = 37/462 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+H L+ SN+ L++ V + + + K N + + V+ +NS++ Y+
Sbjct: 854 QLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYADR 913
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG-SI 137
G +E V + G P +F LL GD ++G +HG + + GF +
Sbjct: 914 GHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHV 973
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ ++++Y C D + +F+E+ + N
Sbjct: 974 QTTLIDMYGKCCCFDHSLAIFNEIPSIALECCN--------------------------- 1006
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG--QWIH 255
+L+ SSLG + D+ AL + H M + D+ T A + + + + Q +H
Sbjct: 1007 ---SLITSSLGCNMFDA-ALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLH 1062
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
S G + ++V ++L+ Y G L ++ +F+ + NV+ + A+IS A G G
Sbjct: 1063 SCLVKLG-FEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDG 1121
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+EL++QM++ G+ P+ TF+ + C AG+ E+ R + M + P+ H+ C
Sbjct: 1122 ARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFAC 1181
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MV++L R G V+EA +++ +R W SLL SC+ HG L + A LI++ +
Sbjct: 1182 MVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKD 1241
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ +SN + + G + A ++ VKKS G SLIE
Sbjct: 1242 PATTLQVSNFFNDIGDRETALRIKEMTNVKEVKKS-GHSLIE 1282
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 146/305 (47%), Gaps = 14/305 (4%)
Query: 64 SVLLFNSMIKAY----SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
S LF++ ++A + +G + P LF ++ + PD +TF L K C R
Sbjct: 4 STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLFK-CSSSSRPRAL 62
Query: 120 QC--VHGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
C +H +R+ + ++ +YT G D + FDE+ +D + ++I G
Sbjct: 63 LCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGL 122
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K G + L + R V+SW +I++ ++ R EA+ F M + D+ TV+
Sbjct: 123 AKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVI 182
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
VL C++L +++G +H + G+ ++ AL+D Y KCG AR VF + R
Sbjct: 183 GVLSACSQLKDLELGCSLHLLVKEKGMSMS-ENLVVALIDMYAKCGDFGHAREVFDAVGR 241
Query: 297 -KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+ SWNA+I G +G ++ L++QM + + TF ++T H+G + +A
Sbjct: 242 GRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDI----ITFNSMITGYIHSGQLREALL 297
Query: 356 LFASM 360
LF +M
Sbjct: 298 LFMNM 302
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 39/311 (12%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A +F+QM ++ FNSMI Y +G E + LF ++ + D +T LL A
Sbjct: 261 VDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSA 320
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C +G L G+ +H I E I ++++Y CG++++ VF M RDV
Sbjct: 321 CASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAW 380
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
MI G G +GK+G L F++MR F+
Sbjct: 381 TAMIAGLAFNG--------------------------MGKAG-----LEYFYQMRCDGFQ 409
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTA 287
+ + +AVL C+ ++ G+ + E LY + + ++D + G+LD A
Sbjct: 410 PNPVSYIAVLTACSHSCLLNEGRLY--FDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEA 467
Query: 288 RNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK-ATFVGVLTCCA 345
++ K +P + N V W +++S + R +L E ++ + P++ A +V + C
Sbjct: 468 MDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLK--IEPDEDAVYVQLYNICI 525
Query: 346 HAGLVEKAREL 356
+ E A ++
Sbjct: 526 DSRKWEDASKI 536
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
L LFRE+ ++ N+++ LG E + F +MR Q EL+ + + C +
Sbjct: 785 ALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQ 844
Query: 245 LGA-VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
G ++ G+ +H +G + + N+LVD Y G +I ++V+SWN
Sbjct: 845 NGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWN 904
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+++S A G + V +QM+ G P+ +FV +L G
Sbjct: 905 SILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTG 949
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M R V S N MI+ + G A ++ M T +L +C+ A+ +
Sbjct: 695 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQL- 753
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
H + GL VG+ALV+ Y A ++F+E+P +N N ++ GL
Sbjct: 754 ---HGRVLALGLCCNPF-VGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGN 809
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG-LVEKARELFASMTGLHSIVPNL 370
E + + M + + N ++ + C G +E+ R+L + I N+
Sbjct: 810 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 869
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMS--IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+VD+ G ++ D +++++ + + W S+LS GH++ A + +K++
Sbjct: 870 FLSNSLVDLYSAIG---DSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQM 926
Query: 429 I 429
+
Sbjct: 927 L 927
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
L + T +H+ ++ + + ++ ++ + IF + +P+V+ F
Sbjct: 1049 LSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICF 1108
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
++I A + G ++LF + + G+ PD TF + C G G+ V E++R
Sbjct: 1109 TAIISACARYGDGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVI-ELMR 1167
Query: 129 SGFE 132
+ E
Sbjct: 1168 ASRE 1171
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 264/464 (56%), Gaps = 34/464 (7%)
Query: 43 VCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
+CG +I A ++F+QM +V+ +N+MI AY N +E + LF + +
Sbjct: 240 LCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE----KNS 295
Query: 101 YTFAPLLKACLGVGDLR--------------------VGQCVHGEIIRSGFERFGSIRI- 139
++ ++ + +G L + V + + + F I I
Sbjct: 296 ISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIR 355
Query: 140 ------GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
++ Y+ CG+MD+ + +F +M +D++ N M+ + + G +D + +F EM+
Sbjct: 356 DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK 415
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E+++VSWN +IS L ++G +AL+ F M + + D++T L CA L A+ +G+
Sbjct: 416 EKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQ 475
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+H SG Y + V NAL+ Y KCG + +A +FK+I +VVSWN++I+ A NG
Sbjct: 476 LHQLVMKSG-YATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNG 534
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G ++L+ +M +GV+P++ TFVG+L+ C+H GL+++ +LF M ++I P EHY
Sbjct: 535 NGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHY 594
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
CMVD+LGR+G + EA+ L+R M I NA IWG+LL +CR HG++ELA+ A ++L+ EP
Sbjct: 595 ACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEP 654
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ NYVLLSN+ AE GRWD+ +R M+E +K PG S IE
Sbjct: 655 HKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIE 698
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 21/319 (6%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GQ+D+ +KVF M+H++ + N MI F K G + LF M +R++VSWN MI++
Sbjct: 29 GQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYL 88
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ R EA +LF +M + D + ++ R G + + + + Y+
Sbjct: 89 HNDRVEEARQLFDKMPTR----DLYSWTLMITCYTRNGELAKARNLFNLLP----YKWNP 140
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
NA+V Y K D AR +F +P K++VSWN+M++G NG LG++ +E+M +
Sbjct: 141 VCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAER 200
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
V G + G + + E F + PN + M+ R G + E
Sbjct: 201 DVVSWNLMVDGFV----EVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAE 251
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A L M IR N W +++++ + HV + A+ + + NS ++ + N Y
Sbjct: 252 ARRLFDQMPIR-NVVAWNAMIAAYVQNCHV---DEAISLFMEMPEKNSISWTTVINGYVR 307
Query: 449 GGRWDDAETLRMWMRENNV 467
G+ D+A L M NV
Sbjct: 308 MGKLDEARQLLNQMPYRNV 326
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 206/457 (45%), Gaps = 47/457 (10%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
+H H++ + +S I A ++F+ M +++ +NSMI AY N EE
Sbjct: 38 FQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEAR 97
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELY 145
+LF + D Y++ ++ G+L + + + ++ +V Y
Sbjct: 98 QLFDKMPT----RDLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGY 150
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
Q D+ ++FD M +D++ N M+ G+ + G++ GL F EM ER VVSWNLM+
Sbjct: 151 AKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVD 210
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC--ARLGAVDIGQWIHSYAESSGL 263
+ G + + F ++ + TV V +C AR G + AE+ L
Sbjct: 211 GFVEVGDLNSSWEFFEKIP------NPNTVSWVTMLCGFARFGKI---------AEARRL 255
Query: 264 YRKV----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ ++ V NA++ Y + +D A ++F E+P KN +SW +I+G G+ +
Sbjct: 256 FDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEAR 315
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L QM + V+ A G + ++ AR++F ++ + ++ + M+
Sbjct: 316 QLLNQMPYRNVAAQTAMISGYV----QNKRMDDARQIFNQIS-----IRDVVCWNTMIAG 366
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSG 437
+ G + EA L + M ++ + W ++++S G ++ A +E+ N+ WNS
Sbjct: 367 YSQCGRMDEALHLFKQM-VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNS- 424
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
L+S + G D L+ +M + + P QS
Sbjct: 425 ---LISGLTQNGSYLD---ALKSFMLMGHEGQKPDQS 455
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 35/327 (10%)
Query: 24 HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEE 83
H + + + + V+ + ++ A KIF +M+ +++ +NS+I + NG +
Sbjct: 378 HLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLD 437
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
+K F L+ + G PD+ TFA L +C + L+VG+ +H +++SG+ + ++
Sbjct: 438 ALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALIT 497
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
+Y CG + +F ++ H DV+ N +I + G+
Sbjct: 498 MYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGN---------------------- 535
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
GR EAL+LFH+M + DE T V +L C+ +G +D G + +
Sbjct: 536 -------GR--EALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYN 586
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELY 322
+ +VD + G L+ A + + + N W A++ +G EL
Sbjct: 587 IEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAA 646
Query: 323 EQMIAKGVSPNKAT-FVGVLTCCAHAG 348
E+++ P+K + +V + A AG
Sbjct: 647 EKLLE--FEPHKTSNYVLLSNMQAEAG 671
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
L SN ++ + CG+ I A +F + + V+ +NS+I AY+LNG E +KLF
Sbjct: 489 LFVSNALITMYAK-CGS---ISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFH 544
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSIRIGVVELYTSC 148
++ G+ PDE TF +L AC VG + G + ++++ E +V+L
Sbjct: 545 KMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRA 604
Query: 149 GQMDD------GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL 202
G++++ GMK+ ++ IHG + L E ++ L
Sbjct: 605 GRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLL--EFEPHKTSNYVL 662
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFE 229
+ + ++GR E R+ M+++ E
Sbjct: 663 LSNMQAEAGRWDEVARVRRLMKEKGAE 689
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
K G +D A VF+ + KN V+ N+MIS A NGR +L++ M + N ++
Sbjct: 27 KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQR----NIVSWNS 82
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
++ H VE+AR+LF M +L + M+ R+G + +A +L + +
Sbjct: 83 MIAAYLHNDRVEEARQLFDKMP-----TRDLYSWTLMITCYTRNGELAKARNLFNLLPYK 137
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNS 436
N ++++ + + A + +L WNS
Sbjct: 138 WNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNS 176
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 270/481 (56%), Gaps = 10/481 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQM 60
+ ++ LL + + QI A F+ L Q + + +S + +I ++ +IF Q+
Sbjct: 13 QTLIALLENCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQI 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P++ +NS+I+ +S V +F + G+ PD T+ + KA + +LR+
Sbjct: 73 PSPTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLAL 132
Query: 121 CVHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
VH I + G F+RF I ++ +Y SCG + KVFDEM R+ + N M+ G+ K
Sbjct: 133 AVHCRIAKEGLWFDRF--IANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAK 190
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
GD+D +F M +R VVSW+ MI K G AL +F MR + +E T+V+V
Sbjct: 191 CGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSV 250
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP--R 296
L CA LGA++ G+ +H Y + + R + + +L+D Y KCG ++ A VF+ +P +
Sbjct: 251 LCACAHLGALEQGRTMHQYMVDNTM-RFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQ 309
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+V+ WN +I GLA +G +EL+++M G+ P++ T++ + + CAH GLV +A
Sbjct: 310 TDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHF 369
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F S+ G +VP EHY CMVDVL R+G + EAYD I M + P A++ G+LL+ C H
Sbjct: 370 FKSL-GKQGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHR 428
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+LAE ++LI LEP + G Y+ LSN+YA WD+A +R M VKKSPG S +
Sbjct: 429 RFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFV 488
Query: 477 E 477
E
Sbjct: 489 E 489
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/476 (35%), Positives = 276/476 (57%), Gaps = 5/476 (1%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVS-VCGTLNEIKYATKIFNQMRNP 63
LRL+ R +T L QIHA+ ++ L + + ++ C + ++ YA +F ++ +
Sbjct: 28 LRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHK 87
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ ++N++I+ +S + E + +F L + + P T+ + KA +G R G+
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQ 147
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG +I+ G E IR ++ +Y +CG + + ++F M DV+ N +I G K G
Sbjct: 148 LHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGL 207
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+D+ LF EM +R+ VSWN MIS ++GR +AL +F EM+++ + D T+V++L
Sbjct: 208 IDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNA 267
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA + G+WIH Y + + + AL+D YCKCG + VF+ P K +
Sbjct: 268 CAYLGASEQGRWIHKYIVRNRFELNSIVI-TALIDMYCKCGCFEEGLKVFECAPTKQLSC 326
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MI GLA NG E ++L+ ++ G+ P+ +F+GVLT CAH+G V KA E F M
Sbjct: 327 WNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMR 386
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I P+++HY CMV+VLG +G + EA LI+ M + + IW SLL++CR +G+VE+A
Sbjct: 387 EKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMA 446
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ A L NL+P + YVL+SN YA G +++A R+ M+E ++K G S IE
Sbjct: 447 KRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 273/528 (51%), Gaps = 67/528 (12%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ Q+HA +R LHQ I +S + A ++FNQ++ P+V L NS+I+A+
Sbjct: 33 NQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNVHLCNSLIRAH 92
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+LN + +F+ ++ G++ D +T+ LLKAC G+ L V + +H I + G
Sbjct: 93 ALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDI 152
Query: 136 SIRIGVVELYTSCG---------------------------------QMDDGMKVFDEMS 162
+ +++ Y+ CG ++ D K+FDEM
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMP 212
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--------- 213
RD+I N M+ G+ + ++ + LF +M ER+ VSW+ M+ K+G
Sbjct: 213 QRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272
Query: 214 ------------------------SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
EA +L +M D A +++L CA G +
Sbjct: 273 MPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLS 332
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G HS + S L SV NAL+D Y KCG L A +VF ++P+K++VSWN M+ GL
Sbjct: 333 LGMRAHSIIKKSNLNSNA-SVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGL 391
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+G G+ +EL+ +M +G+ P+K TF+ VL C HAGL+++ + F SM ++ +VP
Sbjct: 392 GVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPK 451
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+LGR G ++EA ++++M + PN IWG+LL +CR H V++A+ + L+
Sbjct: 452 VEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLV 511
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P + GNY LLSNIYA W+ +R M+ V+K G S +E
Sbjct: 512 KLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 254/434 (58%), Gaps = 4/434 (0%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L A ++F+ + + + + S+I + G EE + LF ++ + + D++T
Sbjct: 294 CGRLES---ARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTL 350
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A +L CL D+ +G+ +H I G + + +V +Y CG + F+ M
Sbjct: 351 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD+I MI F + GDV+K F +M ER+V+SWN M+++ + G E L+++ +M
Sbjct: 411 RDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D T + CA L + +G I + AE G + VSV N++V Y +CG
Sbjct: 471 LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLG-FSSNVSVANSVVTMYSRCGQ 529
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ +F I KN+VSWNAM++G A NG+G +E++E+M+ G P++ ++V VL+
Sbjct: 530 IEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSG 589
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G V + + F SMT H I P EH+ CMVD+LGR+G + +A +LI M +PNAA
Sbjct: 590 CSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAA 649
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWG+LL++CR HG+ +LAE AVK L+ L+ G+Y LL+NIY+E G+ +R MR
Sbjct: 650 IWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMR 709
Query: 464 ENNVKKSPGQSLIE 477
+ V+K+PG S IE
Sbjct: 710 DKGVRKNPGCSWIE 723
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 209/462 (45%), Gaps = 23/462 (4%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA + L S + H +++ I A ++F + P+V +N+MI ++ +G
Sbjct: 25 KLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSG 84
Query: 80 PSEEPVKLFALL--KNLGIWPDEYT-------FAPLLKACLGVGDLRVGQCVHGEIIRSG 130
E KLF + ++ W + +KA +G L++ +HG +
Sbjct: 85 QMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFD 144
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + V+++Y CG MD KVF + + N MI+G+ K G V K L LF
Sbjct: 145 FGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFA 204
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M ER VSWN MIS L + G +E L F EM +Q F + T +VL C + ++
Sbjct: 205 KMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEW 264
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G +H+ V + G L+D Y KCG L++AR VF + N VSW ++I G+A
Sbjct: 265 GAHLHARIVRMEPCLDVYA-GCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVA 323
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHSIVP 368
G E + L+ QM V+ ++ T VL C + +L A GL S VP
Sbjct: 324 QAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVP 383
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+V + + G V +A M IR + W +++++ G VE A ++
Sbjct: 384 VAN---ALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEKAREYFDKM 439
Query: 429 I--NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
N+ WNS + Y + G W++ + + M VK
Sbjct: 440 PERNVISWNS-----MLATYMQRGYWEEGLKVYIQMLREGVK 476
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 155/336 (46%), Gaps = 28/336 (8%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
F +K C + + + + +H ++I G + ++ ++ +Y++CG + D +VF +
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS-------------SLGK 209
+V N MI GF G + + LF +M ER VSWN M+S + G
Sbjct: 67 FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 210 SGRDSEALRL--FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
G AL+L F E D F +D +VL + + GA+D Q + + L+
Sbjct: 127 LGYLKLALQLHGFAEKFD--FGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLF--- 181
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
N+++ Y K G + A +F ++P ++ VSWN MIS L+ +G G + + +M
Sbjct: 182 --CWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWN 239
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY-GC-MVDVLGRSGC 385
+G PN T+ VL+ C +E L A + + P L+ Y GC ++D+ + G
Sbjct: 240 QGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRME---PCLDVYAGCGLIDMYAKCGR 296
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ A + ++ NA W SL+ G E A
Sbjct: 297 LESARQVFDGLT-EHNAVSWTSLIGGVAQAGFQEEA 331
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 33 SNLILAHFV----SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF 88
SN+ +A+ V S CG + E A K+F+ + +++ +N+M+ Y+ NG + +++F
Sbjct: 512 SNVSVANSVVTMYSRCGQIEE---AQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIF 568
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSIRIGVVELYTS 147
+ N+G PD+ ++ +L C G + GQ + + G + +V+L
Sbjct: 569 EKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGR 628
Query: 148 CGQMDDGMKVFDEMSHRD------VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
GQ++ + ++M + ++ IHG K ++ + E+ S+
Sbjct: 629 AGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAEL--AVKNLLELDAEGPGSYC 686
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQ 226
L+ + +SG+ + MRD+
Sbjct: 687 LLANIYSESGKIQGVTNVRKLMRDK 711
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 277/478 (57%), Gaps = 10/478 (2%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMR 61
++ +L + L QIHA ++ L ++ ++ C G + YA+ +F++++
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD--EYTFAPLLKACLGVGDLRVG 119
+P+ +F ++IK +S E + L+A + + + E++ +LKAC + G
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 120 QCVHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+ VHG+++++ F+ F + +V +Y G+++ +VFD M +RDV+ N MI G+
Sbjct: 129 RQVHGQVLKTHLWFDPF--VGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K G+++ +F M ++ VV+W MIS+ ++ +AL LF EM D +V+
Sbjct: 187 KAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVS 246
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-R 296
VL A LG V+ G+W+H+Y + + +G+AL+D Y KCG ++ A +VF+ I R
Sbjct: 247 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 306
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+N+ WN+MISGLA +G ++++ +M + PN+ TF+G+L+ C+H GLVE+ +
Sbjct: 307 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 366
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SM + IVP ++HYGCM+D+ GR+G + +A +I++M + W ++LS+ HG
Sbjct: 367 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 426
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H+E+ + A I L P +S +YVLLSNIYA+ GRWDD +R+ MR+ VKK G S
Sbjct: 427 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 484
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 241/410 (58%), Gaps = 10/410 (2%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N++I AYS N + K+F + D ++ + A + G++ + + E+
Sbjct: 168 NALIDAYSKNQGLSDAKKVFDEMTTR----DVVSWNTAMAAMVRQGEVDAARSMFDEMPE 223
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ ++ G Y G+ + ++F M R+V+ + ++ +CKKGD++ +
Sbjct: 224 KDTVSWNTMLDG----YAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVI 279
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M +++V+W +M+S+ + G EA RLF EM D A ELD VV++L CA G++
Sbjct: 280 FDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSL 339
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMIS 307
+G+ IH + L R + V NAL+D +CKCG ++ A +F EI K++VSWN +I
Sbjct: 340 ALGKRIHRHVRQRKLSRSTL-VCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIG 398
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G GE +EL+ QM +G P+ T + VL+ C H GLVE+ R FA+M + I
Sbjct: 399 GFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIK 458
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMVD+LGR G ++EA D+I+ M PN IWGSLLS+CR H +VE AE AV E
Sbjct: 459 PQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNE 518
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L NL+P ++GNY +LSNIYAE G+W D R+ M+ +K+ G S IE
Sbjct: 519 LSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIE 568
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 180/439 (41%), Gaps = 72/439 (16%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L HG H+ ++HA L+ LH+ + ++ L + +F+
Sbjct: 25 VEEHLASLPHGLPRLRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSA- 83
Query: 61 RNPSVLLFNS------------MIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPL 106
+V L NS +++AY+LN + +F L+ G +T++ L
Sbjct: 84 ---AVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLRQRGT----FTYSFL 136
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+KA G L + H +++ G + +++ Y+ + D KVFDEM+ RDV
Sbjct: 137 IKALAAAG-LTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDV 195
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ N + ++G+VD +F EM E+ VSWN M+ K+G +A LF M
Sbjct: 196 VSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPG- 254
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
R VVS + +V YCK G ++
Sbjct: 255 --------------------------------------RNVVS-WSTVVSAYCKKGDMEM 275
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR +F ++P KN+V+W M+S A G E L+ +M+ + + V +L CA
Sbjct: 276 ARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAE 335
Query: 347 AGLVEKA----RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
+G + R + ++V N ++D+ + GCV A + + + +
Sbjct: 336 SGSLALGKRIHRHVRQRKLSRSTLVCN-----ALMDMFCKCGCVNRADYIFDTEIVEKDL 390
Query: 403 AIWGSLLSSCRTHGHVELA 421
W ++ HG E A
Sbjct: 391 VSWNIIIGGFAMHGPGEKA 409
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 241/410 (58%), Gaps = 10/410 (2%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N++I AYS N + K+F + D ++ + A + G++ + + E+
Sbjct: 240 NALIDAYSKNQGLSDAKKVFDEMTTR----DVVSWNTAMAAMVRQGEVDAARSMFDEMPE 295
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+ ++ G Y G+ + ++F M R+V+ + ++ +CKKGD++ +
Sbjct: 296 KDTVSWNTMLDG----YAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMARVI 351
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +M +++V+W +M+S+ + G EA RLF EM D A ELD VV++L CA G++
Sbjct: 352 FDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAESGSL 411
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMIS 307
+G+ IH + L R + V NAL+D +CKCG ++ A +F EI K++VSWN +I
Sbjct: 412 ALGKRIHRHVRQRKLSRSTL-VCNALMDMFCKCGCVNRADYIFDTEIVEKDLVSWNIIIG 470
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G GE +EL+ QM +G P+ T + VL+ C H GLVE+ R FA+M + I
Sbjct: 471 GFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIK 530
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMVD+LGR G ++EA D+I+ M PN IWGSLLS+CR H +VE AE AV E
Sbjct: 531 PQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAELAVNE 590
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L NL+P ++GNY +LSNIYAE G+W D R+ M+ +K+ G S IE
Sbjct: 591 LSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIE 640
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 180/439 (41%), Gaps = 72/439 (16%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L HG H+ ++HA L+ LH+ + ++ L + +F+
Sbjct: 97 VEEHLASLPHGLPRLRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSA- 155
Query: 61 RNPSVLLFNS------------MIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPL 106
+V L NS +++AY+LN + +F L+ G +T++ L
Sbjct: 156 ---AVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLRQRGT----FTYSFL 208
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+KA G L + H +++ G + +++ Y+ + D KVFDEM+ RDV
Sbjct: 209 IKALAAAG-LTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDV 267
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ N + ++G+VD +F EM E+ VSWN M+ K+G +A LF M
Sbjct: 268 VSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPG- 326
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
R VVS + +V YCK G ++
Sbjct: 327 --------------------------------------RNVVS-WSTVVSAYCKKGDMEM 347
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR +F ++P KN+V+W M+S A G E L+ +M+ + + V +L CA
Sbjct: 348 ARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILAACAE 407
Query: 347 AGLVEKA----RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
+G + R + ++V N ++D+ + GCV A + + + +
Sbjct: 408 SGSLALGKRIHRHVRQRKLSRSTLVCN-----ALMDMFCKCGCVNRADYIFDTEIVEKDL 462
Query: 403 AIWGSLLSSCRTHGHVELA 421
W ++ HG E A
Sbjct: 463 VSWNIIIGGFAMHGPGEKA 481
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 264/482 (54%), Gaps = 47/482 (9%)
Query: 3 RKILRLLHGRNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYAT-----K 55
+ IL LL+ + T + HL Q HA LR Q + I V ++ +Y + +
Sbjct: 54 KAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLR 113
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F+ +R P+V L+N MIK N + + L+ + P++YT+ +LKAC G
Sbjct: 114 VFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGV 173
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+ G VH +++ G G I + +Y S G++ + ++ D+
Sbjct: 174 VAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD--------------- 218
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
K G+VD + + G EAL +FH+M+ + + +
Sbjct: 219 --KGGEVDA-------------------VCMPDRKGCFMEALEIFHQMQKEKIRPRKFVL 257
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+VL CA LGA+D G+WIH+YA+ + + V +G +LVD Y KCG +D A VF+++
Sbjct: 258 PSVLSACANLGALDQGRWIHTYAKRNSIQLDGV-LGTSLVDMYAKCGRIDLAWEVFEKMS 316
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K V SWNAMI GLA +GR E ++L+ +M ++PN+ TFVGVL CAH GLV+K
Sbjct: 317 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLT 373
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+F SM + + P +EHYGC+VD+LGR+G + EA ++ S+ P A+WG+LL +CR H
Sbjct: 374 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 433
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+VEL E K L+ LEP NSG Y LLSNIYA+ GRW++ +R M+E +K +PG S+
Sbjct: 434 GNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSI 493
Query: 476 IE 477
I+
Sbjct: 494 ID 495
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 266/519 (51%), Gaps = 71/519 (13%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ--MRNPSVLLFNSMIKAYSLNGPSEE 83
LRH + + I F+ + + I YA K+F+Q R+ S L NSMIKAY +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDS-FLSNSMIKAYLETRQYPD 60
Query: 84 PVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
L+ L K PD +TF L K+C + G +H +I R GF + GVV
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 143 EL-------------------------------YTSCGQMD------------------- 152
++ Y CG++D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 153 ---DGM----------KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
DG ++FDEM+H+ VI MIHG+C D+D LF M ER++VS
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN MI ++ + E +RLF EM+ + + D+ T+++VLP + GA+ +G+W H +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ L +KV V A++D Y KCG ++ A+ +F E+P K V SWNAMI G A NG
Sbjct: 301 QRKKLDKKV-KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++L+ M+ + P++ T + V+T C H GLVE+ R+ F M + + +EHYGCMVD
Sbjct: 360 LDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G ++EA DLI +M PN I S LS+C + +E AE +K+ + LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL N+YA RWDD ++ MR+N KK G SLIE
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H R KL + + + + EI+ A +IF++M V +N+MI Y+LNG +
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ LF + + PDE T ++ A C HG ++ G + F +R
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITA-----------CNHGGLVEEGRKWFHVMR 401
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 259/465 (55%), Gaps = 40/465 (8%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ F++M + +N+ I +S N +E ++LF ++ G P EYT +L A
Sbjct: 105 IQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNA 164
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVI 167
+ DLR G+ +HG II F G++ I + ++Y CG+++ +FD ++ ++++
Sbjct: 165 SAQLLDLRYGKQIHGSIIVRNF--LGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLV 222
Query: 168 VRNLMIHGF-----------------------------------CKKGDVDKGLYLFREM 192
NLMI G+ C+ G VD+ +F E
Sbjct: 223 SWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEF 282
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+E+ +V W M+ K+GR+ +AL LF+EM + E D T+ +V+ CA+L ++ GQ
Sbjct: 283 KEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQ 342
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+H + +GL ++ V +AL+D Y KCG +D AR+VF +P +NVVSWNAMI G A N
Sbjct: 343 AVHGKSILAGLNNNLL-VSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQN 401
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G + +EL+E M+ + P+ TF+G+L+ C H +E+ +E F S++ H + P L+H
Sbjct: 402 GHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDH 461
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y CMV++LGR+G + +A LI++M+ P+ IW +LLS C T G + AE A + L L+
Sbjct: 462 YACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELD 521
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P + Y++LSN+YA GRW D ++R M+ NVKK G S IE
Sbjct: 522 PTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIE 566
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 20/336 (5%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G++ D +FD+M RD N ++ + K G + F M R VS+
Sbjct: 64 LLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSY 123
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N I+ + E+L LF M+ + FE E T+V++L A+L + G+ IH
Sbjct: 124 NTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIV 183
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
V + NAL D Y KCG ++ AR +F + +KN+VSWN MISG A NG+ E +
Sbjct: 184 RNFLGNVF-IWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIG 242
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L QM G P++ T ++ G V++AR +F+ ++ + M+
Sbjct: 243 LLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCWTAMMVGY 297
Query: 381 GRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHG--HVELAEHAVKELINLEPWN 435
++G +A L M I P++ S++SSC H A H L L
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL---- 353
Query: 436 SGNYVLLS----NIYAEGGRWDDAETLRMWMRENNV 467
N +L+S ++Y++ G DDA ++ M NV
Sbjct: 354 -NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNV 388
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 37/272 (13%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG ++E A ++F++ + ++ + +M+ Y+ NG E+ + LF + I PD YT
Sbjct: 269 CGRVDE---ARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+ ++ +C + L GQ VHG+ I +G + ++++Y+ CG +DD VF+ M
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V+ N MI G ++G D +AL LF M
Sbjct: 386 RNVVSWNAMIVG-------------------------------CAQNGHDKDALELFENM 414
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
Q F+ D T + +L C ++ GQ + S + G+ + +V+ + G
Sbjct: 415 LQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYA-CMVNLLGRTG 473
Query: 283 ILDTARNVFKEIPRK-NVVSWNAMISGLAFNG 313
++ A + K + + + W+ ++S + G
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
EA VL C R ++ + + S+ E + N L+ Y K G L A+N+F
Sbjct: 23 EAYTQLVLE-CVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLF 81
Query: 292 KEIPRKNVVSWNAMISGLA-----------------------------FNGRG--ELGVE 320
++ +++ SWNA++S A F+G + +E
Sbjct: 82 DKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+++M +G P + T V +L A + +++ S+ + + + N+ + + D+
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSII-VRNFLGNVFIWNALTDMY 200
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ G + +A L ++ + N W ++S +G E
Sbjct: 201 AKCGEIEQARWLFDCLT-KKNLVSWNLMISGYAKNGQPE 238
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG +++ A +FN M +V+ +N+MI + NG ++ ++LF +
Sbjct: 363 LIDMYSKCGFIDD---ARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR------------IGVVEL 144
PD TF +L ACL H I G E F SI +V L
Sbjct: 420 KPDNVTFIGILSACL-----------HCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNL 468
Query: 145 YTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDV 182
G+++ + + M+H D ++ + ++ KGD+
Sbjct: 469 LGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDI 507
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 255/438 (58%), Gaps = 9/438 (2%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+++ A ++ + + P + +N+MI Y G EE F + ++GI DEYT+ L+
Sbjct: 231 DDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLI 290
Query: 108 KACLG----VGDLRVGQCVHGEIIRSGFER----FGSIRIGVVELYTSCGQMDDGMKVFD 159
AC +G G+ VHG I+R+ E S+ ++ YT +M + +VFD
Sbjct: 291 SACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFD 350
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+M RD+I N ++ G+ +++ +F EM ER+V++W +MIS L ++G E L+L
Sbjct: 351 KMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKL 410
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F++M+ + E + + C+ LG++D GQ IHS G + +S GNAL+ Y
Sbjct: 411 FNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLG-HDSGLSAGNALITMYS 469
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+CG++++A +VF +P + VSWNAMI+ LA +G G +EL+EQM+ + + P++ TF+
Sbjct: 470 RCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLT 529
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+LT C HAGL+++ R F +M + I P +HY ++D+L R+G +A +I+SM
Sbjct: 530 ILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFE 589
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
A IW +LL+ CR HG++EL A L+ L P G Y++LSN+YA G+WD+ +R
Sbjct: 590 AGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVR 649
Query: 460 MWMRENNVKKSPGQSLIE 477
+ MRE VKK PG S +E
Sbjct: 650 LLMRERGVKKEPGCSWVE 667
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 216/520 (41%), Gaps = 101/520 (19%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R + +L H T+ +HAH L + IL +++ + I YA K+F+++
Sbjct: 9 RYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPK 68
Query: 63 PSVLL---------------------------------FNSMIKAYSLNGPSEEPVKLFA 89
P ++ +N+MI AYS + LF
Sbjct: 69 PDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFV 128
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGD-LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
+K G PD +TF+ +L A + D R Q +H E+I+ G S+ ++ Y C
Sbjct: 129 QMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCC 188
Query: 149 GQ---------MDDGMKVFDEMSHRDVIVRN--LMIHGFCKKGDVDKGLYLFREMRERSV 197
M KVFDE + + MI G+ + D+ L +
Sbjct: 189 ASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPID 248
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA----RLGAVDIGQW 253
V+WN MIS + G EA F M + DE T +++ C ++G + G+
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 254 IHSYAESSGL---YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA------ 304
+H Y + + + V+SV NAL+ FY K + AR VF ++P ++++SWNA
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYV 368
Query: 305 -------------------------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
MISGLA NG GE G++L+ QM ++G+ P F G
Sbjct: 369 NAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAG 428
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG------CMVDVLGRSGCVREAYDLI 393
+T C+ G ++ ++ +HS V L H ++ + R G V A +
Sbjct: 429 AITACSVLGSLDNGQQ-------IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVF 481
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGH----VELAEHAVKELI 429
+M + + W +++++ HGH +EL E +KE I
Sbjct: 482 LTMPYVDSVS-WNAMIAALAQHGHGVKAIELFEQMMKEDI 520
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 275/504 (54%), Gaps = 48/504 (9%)
Query: 17 HLTQIHA-----HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
H+ Q+HA FL L+ A V+V G I +A +F+Q+ P ++N++
Sbjct: 23 HIKQMHAVMALRGFLSDPSELRELLFASAVAVRGA---IAHAYLVFDQIPRPDRFMYNTL 79
Query: 72 IKAYSLNGPSEEPVKLFALL----KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
I+ + + V L+ + G+ PD+ TF +L+AC +G G VH ++
Sbjct: 80 IRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVV 139
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G E ++ ++ ++ SCG + +FD + D + + MI G ++GD+
Sbjct: 140 KAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARD 199
Query: 188 LFREMRERSVVSWNLMISSLGKSG--------------RDS-----------------EA 216
LF E + +VSWN+MI++ K G RD A
Sbjct: 200 LFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHA 259
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK---VVSVGNA 273
L LF +M+ + D T++++L CA G +D+GQ +HS S ++ + V +GNA
Sbjct: 260 LELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHS--SLSDMFSRNGFPVVLGNA 317
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG + +A VF + K+V +WN+++ GLA +G ++++E+M+ V P+
Sbjct: 318 LIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPD 377
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TFV VL C+H G+V+K RE F M + + PN++HYGCMVD+LGR+G ++EA++ I
Sbjct: 378 EITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFI 437
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+M PN+ IW +LLS+CR HG +ELA+HA ++L+ SG+YVLLSNIYA G W
Sbjct: 438 DTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWF 497
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+E +R M ++ V K GQ+ ++
Sbjct: 498 GSEKMRKLMDDSGVNKEAGQTFVD 521
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 277/551 (50%), Gaps = 81/551 (14%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+ +L L+ L QIHA + L + I+ ++ + + YAT++FNQ +
Sbjct: 7 KSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQE 66
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRV 118
P ++N+MI+AYS S+ P ++ + I D+YT+ + KAC +
Sbjct: 67 PDGFIYNAMIRAYS---SSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEK 123
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSC------------------------------ 148
G+ VHG I+R G+E G ++ ++ Y C
Sbjct: 124 GKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYAR 183
Query: 149 -GQMDDGMKVFDEMSH-----------------------------------RDVIVRN-- 170
G + D VF EM +D+++R
Sbjct: 184 QGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGV 243
Query: 171 ----LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+I+ + K G +D LF E+ E++ V WN +I + G +E + L EM
Sbjct: 244 KLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLS 303
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D TV VL CA++GA ++G W+H +AE G++ V +G AL+D Y KCG +
Sbjct: 304 NLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWD--VFIGTALIDMYAKCGFIGA 361
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR VF ++ +NV +WNA++SG A +G+ E +EL+ +M G P+ TF+ VL CAH
Sbjct: 362 ARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAH 421
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+GLVE ++ F M + I P +EHYGCMVD+LGR+G ++EA +LI+ M + PN +WG
Sbjct: 422 SGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWG 481
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LLS+C HG++E+ E A +I L + G+YV+L+N+YA R++ + +R M E
Sbjct: 482 ALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKG 541
Query: 467 VKKSPGQSLIE 477
+ KS G S+IE
Sbjct: 542 ICKSHGCSMIE 552
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 244/418 (58%), Gaps = 11/418 (2%)
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
MI+ +S + + V+L+ + P+E+T++ L+ C LR G+ VHG ++ +G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 131 FERFGSIRIGVVELYTSCGQMD---DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ +R +V LY G D +VFDE+ R+++ N ++ G+ + GDVD
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+F EM ER+VVSW MI+ + GR +AL LFHEMR +LD+ +VA L CA LG
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 248 VDIGQWIHSYAES---SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+ +G WIHSY + +G +VS+ N+L+ Y CG++D A VF + +++ +SW +
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVS---PNKATFVGVLTCCAHAGLVEKARELFASMT 361
MI+G A G E + +++ M G P+ TF+GVL C+HAG V++ R F M
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
IVP +EHYGCMVD+L R+G + EA+ LI SM ++PN A+WG+LL CR H + ELA
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELA 360
Query: 422 EHAVKEL-INLEPWNSGNY-VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
H ++L + L+P + Y VLLSN+YA RW D +R M E V+K G+S ++
Sbjct: 361 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQ 418
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 40/320 (12%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +LA +V CG ++ A +IF++M +V+ + +MI + G ++ + LF ++
Sbjct: 103 NSLLAGYVR-CG---DVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRR 158
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI---IRSGFER-FGSIRIGVVELYTSCG 149
G+ D+ L AC +GDL++G +H I + +G + S+ ++ +Y SCG
Sbjct: 159 AGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCG 218
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+D KVF M R I MI GF K+G ++ L +F+ M+
Sbjct: 219 VIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGT-----------D 267
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVV 268
GR D T + VL C+ G VD G+ + + G+ ++
Sbjct: 268 EGRP-----------------DGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIE 310
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIA 327
G +VD + G LD A + + +P K N W A++ G + EL + Q +A
Sbjct: 311 HYG-CMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHV-AQKLA 368
Query: 328 KGVSPNKATFVGVLTCCAHA 347
+ P++A VL +A
Sbjct: 369 LELKPDQAAGYLVLLSNVYA 388
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 19 TQIHAHFLRHKLHQSNLIL--------AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
T IH+ ++ +LH N L H + CG +++ A K+F M+ S + + S
Sbjct: 185 TWIHS-YIDERLHAGNQPLLVSLNNSLIHMYASCGVIDK---AYKVFIGMQQRSTISWTS 240
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGI---WPDEYTFAPLLKACLGVGDLRVG----QCVH 123
MI ++ G +EE + +F ++ LG PD TF +L AC G + G +C++
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 124 GEI-IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
+ I E +G + V+L + G +D+ ++ + M
Sbjct: 301 KKWGIVPRIEHYGCM----VDLLSRAGFLDEAHRLIESM 335
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 262/518 (50%), Gaps = 69/518 (13%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLNGPSEEP 84
LRH + + I F+ + + I YA K+F+Q L NSMIKAY +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPHREDSFLCNSMIKAYLETRHYNDS 61
Query: 85 VKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF------------ 131
+ L K + PD +TF + K+C + G +H +I RSGF
Sbjct: 62 FAFYRDLRKETCLAPDNFTFTTMTKSCTLSMCVYQGLQLHSQIWRSGFCADMYVSTGVVD 121
Query: 132 --ERFGS--------------------------IRIGVVEL------------------- 144
+FG +R G ++L
Sbjct: 122 MYAKFGKMGCARNVFDEMPQRSEVSWTALICGYVRFGELDLASKLFDQMPQVKDVVIYNA 181
Query: 145 ----YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ G M ++FDEM+H+ VI MIHG+C D+D LF M ER++VSW
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNSNDIDSARKLFDAMPERNLVSW 241
Query: 201 NLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
N MI ++ + EA+RLF EM+ + + D+ T+++VLP + GA+ +G+W H + +
Sbjct: 242 NTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQ 301
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
L +KV V A++D Y KCG ++ A+ +F E+P K V SWNAMI G A NG +
Sbjct: 302 RKNLDKKV-KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAHAAL 360
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+ M AK P++ T + V++ C H GLVE+ R+ F M + +EHYGCMVD+
Sbjct: 361 DLFLTM-AKEEKPDEITMLAVISACNHGGLVEEGRKWFQMMRKF-GLNAKIEHYGCMVDL 418
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G +++A LI +M +PN I S LS+C + +E AE +K+ + LEP N GNY
Sbjct: 419 LGRAGNLKQAEHLITNMPFKPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLL N+YA RWDD ++ MR+N KK G SLIE
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNMMRKNEAKKEVGCSLIE 516
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H R L + + + + EI+ A +IF++M V +N+MI Y+LNG +
Sbjct: 297 HCFVQRKNLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ LF + PDE T ++ A C HG ++ G + F +R
Sbjct: 357 HAALDLFLTMAKEEK-PDEITMLAVISA-----------CNHGGLVEEGRKWFQMMR 401
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 251/457 (54%), Gaps = 33/457 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + + +S+ LN ++ KIF++M+ ++ +N+MI A + N
Sbjct: 379 LHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTL 438
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ +LF ++ I P+ YT +L AC V L G+ +HG +++ E +R
Sbjct: 439 RAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTA 498
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ ++Y +CG DE + RD LF +R ++SW
Sbjct: 499 LADMYMNCG---------DEATARD----------------------LFEGCPDRDLISW 527
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N MI+S K+ + +AL LFH M +A E + T++ VL L + GQ +H+Y
Sbjct: 528 NAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTR 586
Query: 261 SGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + +S+ NA + Y +CG L +A N+FK +P++N++SWNAMI+G NGRG +
Sbjct: 587 RGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAM 646
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ QM+ G PN TFV VL+ C+H+G +E +LF SM ++ P L HY C+VD+
Sbjct: 647 LAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDL 706
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R GC+ EA + I SM I P+A++W +LLSSCR + + A+ ++L LEP N+GNY
Sbjct: 707 LARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNY 766
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VLLSN+YA G W + +R W++E ++K PG S I
Sbjct: 767 VLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 803
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 208/476 (43%), Gaps = 75/476 (15%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH ++ + + IL +++ ++ + ++F + N L+NSMI AY+ G
Sbjct: 276 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 335
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCVHGEIIRSGFERFGSI 137
EE + LF +++ G+ DE T +L C L G L+ G+ +H +I+SG S+
Sbjct: 336 CHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIKSGMRIDASL 394
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ +YT ++ K+FD M D+I N M
Sbjct: 395 GNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM------------------------- 429
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
I +L ++ ++A LF MR+ + + T++++L C + +D G+ IH Y
Sbjct: 430 ------ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGY 483
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + AL D Y CG TAR++F+ P ++++SWNAMI+ N +
Sbjct: 484 VMKHSIEIN-QPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHK 542
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCM 376
+ L+ +MI++ PN T + VL+ H + + + L A +T S+ +L
Sbjct: 543 ALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAF 601
Query: 377 VDVLGRSGCVREAYDLIRSMS----------------------------------IRPNA 402
+ + R G ++ A ++ +++ RPN
Sbjct: 602 ITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNG 661
Query: 403 AIWGSLLSSCRTHGHVELAE---HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
+ S+LS+C G +E+ H++ + N+ P +Y + ++ A GG D+A
Sbjct: 662 VTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTP-ELVHYSCIVDLLARGGCIDEA 716
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 42/365 (11%)
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
TKI Q+++P +NS+IK + + + + +++LG+ P+ T +LKAC
Sbjct: 11 TKI--QIKDPK--HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 66
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+ G+ +H I G + +R+G VV+ Y CG ++D VFD MS RDV++ N
Sbjct: 67 NAVERGKSIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNA 124
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
M++G+ G ++ + L REM GR++ +
Sbjct: 125 MVYGYVGWGCYEEAMLLVREM------------------GREN-------------LRPN 153
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
T+VA+L C + +G+ +H Y +G++ V AL+ FY + + +F
Sbjct: 154 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLF 212
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ +N+VSWNAMISG G +EL+ QM+ V + T + + CA G ++
Sbjct: 213 DLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLK 272
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+++ + V +L ++++ +G + ++ L S+ R +A +W S++S+
Sbjct: 273 LGKQIH-QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR-DAPLWNSMISA 330
Query: 412 CRTHG 416
G
Sbjct: 331 YAAFG 335
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 83/414 (20%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
F CG + + A +F+ M + V+L+N+M+ Y G EE + L + + P+
Sbjct: 97 FYCKCGFVED---ARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPN 153
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKV- 157
T LL AC G +LR+G+ VHG +R+G F+ + ++ Y + M+V
Sbjct: 154 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY-----LRFDMRVL 208
Query: 158 ---FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
FD M R+++ N MI G+ GD K L LF +M
Sbjct: 209 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM---------------------- 246
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
L E++ D T++ + CA LG++ +G+ IH A + + NAL
Sbjct: 247 ----LVDEVK-----FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY-ILNAL 296
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
++ Y G L+++ +F+ +P ++ WN+MIS A G E ++L+ +M ++GV ++
Sbjct: 297 LNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 356
Query: 335 ATFVGVLTCC--------------AHA----------------------GLVEKARELFA 358
T V +L+ C AH VE +++F
Sbjct: 357 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 416
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
M G+ I N + L C E ++ +R I+PN+ S+L++C
Sbjct: 417 RMKGVDIISWNTMILALARNTLRAQAC--ELFERMRESEIKPNSYTIISILAAC 468
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 176/392 (44%), Gaps = 35/392 (8%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + LR+ + SN +A + +++ +F+ M +++ +N+MI Y G
Sbjct: 176 VHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGD 235
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ ++LF + + D T ++AC +G L++G+ +H I+ F I
Sbjct: 236 YFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 295
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ +Y++ G ++ ++F+ + +RD + W
Sbjct: 296 LLNMYSNNGSLESSHQLFESVPNRDAPL-------------------------------W 324
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA-VDIGQWIHSYAE 259
N MIS+ G EA+ LF M+ + + DE TVV +L +C L + + G+ +H++
Sbjct: 325 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 384
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SG+ R S+GNAL+ Y + +++ + +F + +++SWN MI LA N
Sbjct: 385 KSGM-RIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQAC 443
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
EL+E+M + PN T + +L C ++ R + + HSI N + D+
Sbjct: 444 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK-HSIEINQPLRTALADM 502
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
G A DL R + W ++++S
Sbjct: 503 YMNCGDEATARDLFEGCPDR-DLISWNAMIAS 533
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 261/461 (56%), Gaps = 4/461 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA ++ L+Q I ++ G I+ A ++F+ + + + S++ A +L+
Sbjct: 24 KLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACNLSN 83
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ + L + G PD + FA L+KAC LGV ++ G+ VH S F +
Sbjct: 84 RPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVV 143
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ ++++Y G D G VFD +S + I MI G+ + G + LFR+ R++
Sbjct: 144 KSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNL 203
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGAVDIGQWIHS 256
+W +IS L +SG +A LF EMR + + + V++ V+ CA L ++G+ +H
Sbjct: 204 FAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHG 263
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+ G Y + + NAL+D Y KC L A+ +F E+ RK+VVSW ++I G A +G+ E
Sbjct: 264 VVITLG-YESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAE 322
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ LY++M+ GV PN+ TFVG++ C+HAGLV K R LF +M H I P+L+HY C+
Sbjct: 323 EALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCL 382
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
+D+ RSG + EA +LIR+M + P+ W +LLSSC+ HG+ ++A L+NL+P +
Sbjct: 383 LDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDP 442
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+Y+LLSNIYA G W+D +R M KK+PG S I+
Sbjct: 443 SSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCID 483
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 170/447 (38%), Positives = 251/447 (56%), Gaps = 12/447 (2%)
Query: 40 FVSVCGTLNEI-KYATKIFNQMRNP-SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW 97
+S CG I + + + P SV L +++I+A S + + L+A L G+
Sbjct: 10 LLSRCGEARAIVRIQAALLTSGQLPRSVELHDALIRALSRSARPHLALPLYAHLLRAGLL 69
Query: 98 PDEYTFAPLLK------ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS-CGQ 150
P +T LLK A G L + VH ++ G +RF + ++ ++ G
Sbjct: 70 PTPHTLPSLLKSMALSPAVPGAAVLAL--TVHTHAVKLGLDRFVLVSNALIRVHAGFLGS 127
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+ DG+ + + D N +I + + G + LF EM R+ VSW+ M++ ++
Sbjct: 128 LADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQA 187
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G EALR+F M+ + D+ +V VL CA+ GA++ G+W+H Y ++ G+ +
Sbjct: 188 GDGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLF-F 246
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G ALVD Y KCG + A +VF+ + KNV++W MI GLA +GRG V L+ QM + G+
Sbjct: 247 GTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGI 306
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P+ F+GVL C HAGLV+K RELF SM + I P +EHYGCMVD+L R+G + EA
Sbjct: 307 RPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAK 366
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
++I+ M + P+A IWG+L++ CR H +VE AE+ K I LEP SG YVLLSNIYA G
Sbjct: 367 EMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASG 426
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
R A +R MRE V K+PG S +E
Sbjct: 427 RHASAREIRHLMREKGVDKTPGCSTVE 453
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG E++ A +F +M+ +VL + +MIK +++G E V LFA +++ GI
Sbjct: 250 LVDMYSKCG---EVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGI 306
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-----GFERFGSIRIGVVELYTSCGQM 151
PD+ F +L AC G + G+ + ++R E +G + V+L G +
Sbjct: 307 RPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCM----VDLLARNGFL 362
Query: 152 DDGMKVFDEMS-HRDVIVRNLMIHGFCKKGDVDKGLYLFRE---MRERSVVSWNLMISSL 207
+ ++ +M D ++ ++ G +V+ Y+ + + ++ L+ +
Sbjct: 363 YEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIY 422
Query: 208 GKSGRDSEALRLFHEMRDQAFE 229
SGR + A + H MR++ +
Sbjct: 423 AASGRHASAREIRHLMREKGVD 444
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 244/425 (57%), Gaps = 10/425 (2%)
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
T +F + N++I AYS N + K+F + D ++ + A +
Sbjct: 228 THVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTR----DVVSWNTAMAAMVRK 283
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
G++ + + E+ + ++ G Y G+ ++ ++F M R+V+ + ++
Sbjct: 284 GEVDAARSMFDEMPEKDTVSWNTMLDG----YAKAGEAEEAFELFQRMPGRNVVSWSTVV 339
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
+CKKGD++ +F +M +++V+W +M+S+ + G EA RLF EM++ A ELD
Sbjct: 340 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVV 399
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK- 292
VV++L CA G + +G+ IH + L R + V NAL+D +CKCG ++ A +F
Sbjct: 400 AVVSILAACAESGCLALGKRIHRHVRQRKLGRSTL-VCNALMDMFCKCGCVNRADYIFDT 458
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
EI K+ VSWN +I G A +G GE + L+ QM +G P+ T + VL+ C H GLVE+
Sbjct: 459 EIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEE 518
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R FA+M + I P +EHYGCMVD+LGR G ++EA D+I+SM PN IWGSLLS+C
Sbjct: 519 GRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSAC 578
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R H +VE AE A EL NL+P N+GNY +LSNIYAE G+W D R+ M+ +K+ G
Sbjct: 579 RLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 638
Query: 473 QSLIE 477
S IE
Sbjct: 639 SSWIE 643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 183/432 (42%), Gaps = 61/432 (14%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK-----YATK 55
+E + L HG H+ ++HA LR LH+ + ++ L + ++
Sbjct: 103 VEEHLASLPHGLPRLRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAA 162
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLKACLGVG 114
+ LL N++++AY+LN P A+ ++ + D +T++ L+KA G
Sbjct: 163 AAPPFAPSTALLANTLLRAYALNS---LPHAALAVFVDMPLRQRDTFTYSFLIKALATAG 219
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
V + H + + G + +++ Y+ + D KVFDEM+ RDV+ N +
Sbjct: 220 VTPV-RAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMA 278
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
+KG+VD +F EM E+ VSWN M+ K+G EA LF M
Sbjct: 279 AMVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPG--------- 329
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
R VVS + +V YCK G ++ AR +F ++
Sbjct: 330 ------------------------------RNVVS-WSTVVSAYCKKGDMEMARVIFDKM 358
Query: 295 PRKNVVSWNAMISGLAFNGR-GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
P KN+V+W M+S A G GE G L+ +M + + V +L CA +G +
Sbjct: 359 PAKNLVTWTIMVSACAQKGLVGEAG-RLFTEMKEAAIELDVVAVVSILAACAESGCLALG 417
Query: 354 ----RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
R + G ++V N ++D+ + GCV A + + + ++ W ++
Sbjct: 418 KRIHRHVRQRKLGRSTLVCN-----ALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIII 472
Query: 410 SSCRTHGHVELA 421
HGH E A
Sbjct: 473 GGFAMHGHGEKA 484
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 257/465 (55%), Gaps = 35/465 (7%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+H H+ + LH ++ + A K+F+++ + + +NSMI Y
Sbjct: 139 SHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGY 198
Query: 76 SLNGPSEEPVKLFALL-KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ G + E V++F + + G PDE + LL AC +GDL +G+ V G ++ G
Sbjct: 199 AKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLN 258
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
I ++ +Y CG+++ ++FD M+
Sbjct: 259 SYIGSALISMYAKCGELESARRIFDGMA-------------------------------A 287
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
R V++WN +IS ++G EA+ LFH M++ ++ T+ AVL CA +GA+D+G+ I
Sbjct: 288 RDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQI 347
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
YA G ++ + V AL+D Y K G LD A+ VFK++P+KN SWNAMIS LA +G+
Sbjct: 348 DEYASQRG-FQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGK 406
Query: 315 GELGVELYEQMIAKG--VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
+ + L++ M +G PN TFVG+L+ C HAGLV++ LF M+ L +VP +EH
Sbjct: 407 AKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEH 466
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y CMVD+L R+G + EA+DLIR M +P+ G+LL +CR+ +V++ E ++ ++ ++
Sbjct: 467 YSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVD 526
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P NSGNY++ S IYA W+D+ +R+ MR+ + K+PG S IE
Sbjct: 527 PSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIE 571
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 263/486 (54%), Gaps = 35/486 (7%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A ++ L+Q ++ F++ C + + A QM+ P+V ++N++ K +
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
++L+ + + P YT++ L+KA R G+ + I + GF I+ ++
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLI 166
Query: 143 ELYTSCGQMDDGMKVFDEMSHRDVI-------------------------------VRNL 171
+ Y++ G++ + KVFDEM RD I N
Sbjct: 167 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 226
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I+G+ G++++ LF +M + ++SW MI ++ R EA+ +F++M ++ D
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+ V+ CA LG ++IG+ +H Y +G V +G+ALVD Y KCG L+ A VF
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSALVDMYSKCGSLERALLVF 345
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+P+KN+ WN++I GLA +G + ++++ +M + V PN TFV V T C HAGLV+
Sbjct: 346 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 405
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R ++ SM +SIV N+EHYG MV + ++G + EA +LI +M PNA IWG+LL
Sbjct: 406 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 465
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-S 470
CR H ++ +AE A +L+ LEP NSG Y LL ++YAE RW D +R MRE ++K
Sbjct: 466 CRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 525
Query: 471 PGQSLI 476
PG S I
Sbjct: 526 PGTSSI 531
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/480 (36%), Positives = 268/480 (55%), Gaps = 7/480 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+ L L+ + + + QIH H + L N + V L A K+F +M
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P V FN MI Y+ G S E +KL+ + + GI PDEYT LL C + D+R+G+
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 122 VHGEIIRSGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG I R G ++ + ++++Y C + + FD M +D+ N M+ GF +
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR-LFHEMRD-QAFELDEATVVA 237
GD++ +F +M +R +VSWN ++ K G D +R LF+EM + + D T+V+
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
++ A G + G+W+H L + + +AL+D YCKCGI++ A VFK K
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQL-KGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+V W +MI+GLAF+G G+ ++L+ +M +GV+PN T + VLT C+H+GLVE+ +F
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI-RSMSIRPNAAIWGSLLSSCRTHG 416
M P EHYG +VD+L R+G V EA D++ + M +RP+ ++WGS+LS+CR
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGE 552
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+E AE A+ EL+ LEP G YVLLSNIYA GRW ++ R M VKK+ G S +
Sbjct: 553 DIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 201/460 (43%), Gaps = 88/460 (19%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIF-NQMRN 62
L LL N+R Q+ A +R L ++ F S + A +F N N
Sbjct: 38 LVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPN 97
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V ++N+MI A S E L++ + + PD TF L+KA + +++ +
Sbjct: 98 PNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---I 152
Query: 123 HGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H II SG G+ + +V+ Y G KVF M H DV N+MI G+ K+G
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG- 211
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++L EAL+L+ +M E DE TV+++L
Sbjct: 212 ------------------FSL------------EALKLYFKMVSDGIEPDEYTVLSLLVC 241
Query: 242 CARLGAVDIGQWIHSYAESSG-LYRKVVSVGNALVDFYCKC------------------- 281
C L + +G+ +H + E G +Y + + NAL+D Y KC
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 282 ------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE--LYEQMIA 327
G ++ A+ VF ++P++++VSWN+++ G + G + V YE I
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG------CMVDVLG 381
+ V P++ T V +++ A+ G + R +H +V L+ G ++D+
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGR-------WVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ G + A+ + ++ + + A+W S+++ HG+ + A
Sbjct: 415 KCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQA 453
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 246/436 (56%), Gaps = 32/436 (7%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
+ CG + + A K+F+ M + ++ + M+ Y EE + LF +K + PD+
Sbjct: 115 AACGRVED---ARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQV 171
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
A +L C +LR G+ +H ++ S + ++ +Y SC M+ K+++ +
Sbjct: 172 IIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASCADMEMAEKLYNRV 231
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
S +D+++ M++G+ K G V+ +F M E+ VVSW+ MI+ +S + EAL LFH
Sbjct: 232 SEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAESSKPMEALNLFH 291
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
+M+ + DE T++++LPI GNAL+D + KC
Sbjct: 292 DMQRSGVQPDEITMLSILPI-----------------------------GNALIDMFSKC 322
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G L A +VF +P+KNVV+W ++I+ A +G G + L+E M ++G+ PN TF+G+L
Sbjct: 323 GSLTLALDVFNAMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLL 382
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C HAGLVE+ R LF M + I P EHYGCMVD+LGR+ + +A DLI+SM +RPN
Sbjct: 383 YACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPN 442
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
IWGSLL++CR HG +EL A K+++ L+P + G VLLSNIYAE G W+D + +R
Sbjct: 443 VVIWGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEVRGV 502
Query: 462 MRENNVKKSPGQSLIE 477
M+ K G S +E
Sbjct: 503 MKVQGTWKKKGCSWME 518
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 172/418 (41%), Gaps = 50/418 (11%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L ++HAHFLR F +P L + I A
Sbjct: 10 QLGELHAHFLRRG-------------------------HPFPPAAHPDPDLDRAYISAIR 44
Query: 77 LNGPSEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ FA L+ +G+ P LL+A HG R G E G
Sbjct: 45 AATAPRLALAAFACLRRVGLPAPGRRALPSLLRAIALARFPGTAGAAHGLAFRVGAEVDG 104
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V Y +CG+++D KVFD M RD++ +M+ +C+ + ++ L LF M+
Sbjct: 105 FVGTALVRAYAACGRVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRS 164
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE----LDEATVVAVLPICARLGAVDIG 251
VV ++I+++ + + LR + +D A++ + A +++
Sbjct: 165 RVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMYASCADMEMA 224
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +++ K + + +V Y K G ++ A ++F +P K+VVSW+AMI+G A
Sbjct: 225 EKLYNRVS-----EKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAE 279
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTC-------CAHAGLVEKARELFASMTGLH 364
+ + + L+ M GV P++ T + +L + G + A ++F +M
Sbjct: 280 SSKPMEALNLFHDMQRSGVQPDEITMLSILPIGNALIDMFSKCGSLTLALDVFNAMPQ-- 337
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVE 419
N+ + ++ G R A L +M I+PN + LL +C G VE
Sbjct: 338 ---KNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVE 392
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/437 (38%), Positives = 244/437 (55%), Gaps = 9/437 (2%)
Query: 49 EIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
+ + A + QMR+ P+V+ +N ++ + +G + + V + + G +PD +
Sbjct: 98 DAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVS 157
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L A V ++ VG+ VHG ++++G + ++++Y CG+ D+ ++VF E SH
Sbjct: 158 CALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHM 217
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREM----RERSVVSWNLMISSLGKSGRDSEALRLF 220
DV N ++ G + V + L LFRE E +VVSW +++ ++GRD EA+ LF
Sbjct: 218 DVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLF 277
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M+ E + T+ VLP A + A+ G+ H ++ G V VG+ALVD Y K
Sbjct: 278 RTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVY-VGSALVDMYAK 336
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG AR +F +P +NVVSWNAMI G A +G V+L+ M P+ TF V
Sbjct: 337 CGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCV 396
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C+ AGL E+ R F M H I P +EHY CMV +LGRSG + EAYDLI M P
Sbjct: 397 LGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEP 456
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
++ IWGSLL SCR +G+V LAE A ++L LEP N+GNYVLLSNIYA WD +R
Sbjct: 457 DSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRD 516
Query: 461 WMRENNVKKSPGQSLIE 477
M+ +KK G S IE
Sbjct: 517 EMKNMGLKKEKGCSWIE 533
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 9/299 (3%)
Query: 87 LFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYT 146
L+ L+++ PD + LK+C + + +H + SG + ++ Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCPA---QPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNL 202
G VFD M ++V+ + +I G+ +GD + L +MR E +V++WN
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
++S L +SGR +A+ M + F D V L + V +G+ +H Y +G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
R V AL+D Y KCG D VF E +V S NA+++GL+ N + + L+
Sbjct: 184 C-RLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF 242
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+ I +GV N ++ ++ CC G +A +LF +M + + PN C++
Sbjct: 243 REFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSI-GVEPNSVTIPCVLPAFA 300
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
S + L+H +R +F D + + L C A + + +H+ A SGL V ++
Sbjct: 2 SHSNSLYHFLRHVSFPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLAEDPF-VASS 57
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+ Y + G AR+VF +P KNVV W+A+I+G + G E L EQM + GV PN
Sbjct: 58 LLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPN 117
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHS--IVPNLEHYGCMVDVLG 381
T+ G+++ +G +A + ++ +HS P+ C + +G
Sbjct: 118 VITWNGLVSGLNRSG---RALDAVTALVRMHSEGFFPDATGVSCALSAVG 164
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+ L+HGR+ H LR + + V + + ++A IF+ M + +
Sbjct: 302 VAALMHGRSA-------HCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN 354
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ +N+MI Y+++G + V+LF ++ PD TF +L AC G G+
Sbjct: 355 VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFN 414
Query: 125 EI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E+ I E + + V L G++D+ + +EM
Sbjct: 415 EMQQGHGISPRMEHYACM----VTLLGRSGKLDEAYDLINEM 452
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/457 (36%), Positives = 251/457 (54%), Gaps = 36/457 (7%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
IF+ M + + +N++I ++ NG + +F ++ G+ P EYT +L AC + D
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
LR G+ +HG II + + +LY CG++D ++FD M R+V+ NLMI G
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230
Query: 176 FCKK-----------------------------------GDVDKGLYLFREMRERSVVSW 200
+ K G +D+ +F E+RE+ V W
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCW 290
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+MI ++G++ +AL LF EM + D T+ +V+ CA+L ++ GQ +H A
Sbjct: 291 TIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G+ ++ V +ALVD YCKCG+ A +F + +NVVSWN+MI G A NG+ +
Sbjct: 351 MGVNDDLL-VSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALS 409
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
LYE M+ + + P+ TFVGVL+ C HAGLVE+ +E F SM+ H + P +HY CMV++
Sbjct: 410 LYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLF 469
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GRSG + +A DLI SMS PN+ IW ++LS C G ++ E A + LI L P+N+ Y+
Sbjct: 470 GRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYI 529
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LSN+YA GRW D ++R M+ +VKK S IE
Sbjct: 530 MLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIE 566
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 137/275 (49%), Gaps = 9/275 (3%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G++ K+FDEM+ RD N M+ + K G V+ +F M R VS+
Sbjct: 64 LLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSY 123
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N +IS +GR AL +F M+ + + E T V+VL C +L + G+ IH
Sbjct: 124 NTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIII 183
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
L V V NAL D Y +CG +D AR +F + +NVV+WN MISG N + E ++
Sbjct: 184 CNLGGNVF-VCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCID 242
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ +M + P++ T VL AG +++AR++F + + + GC
Sbjct: 243 LFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGC----- 297
Query: 381 GRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSC 412
++G +A L M + RP+ S++SSC
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 46/335 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH + L + + + EI A ++F++M +V+ +N MI Y N
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E+ + LF ++ + PD+ T + +L A + G + + V GEI + + +
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIV 295
Query: 140 GVVELYTSCGQMDDGMKVFDEM-------------------------------------- 161
G + G+ +D + +F EM
Sbjct: 296 GCAQ----NGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLM 351
Query: 162 -SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ D++V + ++ +CK G +F M+ R+VVSWN MI +G+D EAL L+
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYC 279
M ++ + D T V VL C G V+ G ++ S ++ GL +V+ +
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGL-EPTPDHYACMVNLFG 470
Query: 280 KCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNG 313
+ G +D A ++ + ++ N + W ++S G
Sbjct: 471 RSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 42/261 (16%)
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C R VD + + S+ + N L++ Y K G + AR +F E+ +++ S
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFS 91
Query: 302 WNAM-------------------------------ISGLAFNGRGELGVELYEQMIAKGV 330
WNAM ISG A NGRG + ++ +M +G+
Sbjct: 92 WNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P + T V VL C + + +++ + + ++ N+ + D+ R G + +A
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGKQIHGRII-ICNLGGNVFVCNALTDLYARCGEIDQAR 210
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSGNYVLLSNI--- 445
L M IR N W ++S + E E+ NL+P + V S++
Sbjct: 211 RLFDRMVIR-NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKP----DQVTASSVLGA 265
Query: 446 YAEGGRWDDAETLRMWMRENN 466
Y + G D+A + +RE +
Sbjct: 266 YIQAGYIDEARKVFGEIREKD 286
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 172/475 (36%), Positives = 274/475 (57%), Gaps = 15/475 (3%)
Query: 13 NTRTHLTQIHAHFLR-----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+ + Q HAH + H + + L+ S G+L+ YA ++F+Q+ P V +
Sbjct: 26 KSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLS---YAHQLFDQIPKPDVFI 82
Query: 68 FNSMIKAYS-LNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKAC-LGVGDLRVGQCVHG 124
+N+MIKA++ + S +++F ++++ G P+ YTF + KAC G+G L G+ +
Sbjct: 83 YNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLE-GEQIRV 141
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I+ G E + ++ +Y + G +D+ +VFD +D+ N+MI G+ G++ +
Sbjct: 142 HAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGR 201
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F EM ER VVSW +I+ + G EAL LFHEM +E T+ + L CA
Sbjct: 202 AKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACAN 261
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP--RKNVVSW 302
L A+D G+WIH Y + S + + + +L+D Y KCG +D A VF + + V W
Sbjct: 262 LVALDQGRWIHVYIDKSEI-KMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPW 320
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
NAMI G A +G+ + ++L+EQM + VSPNK TFV +L C+H LVE+ R F SM
Sbjct: 321 NAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMAS 380
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EHYGCMVD+LGRSG ++EA + + +M + P+A IWG+LL +CR H +E +
Sbjct: 381 SYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQ 440
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K + L+ + G +VLL+N+Y+ G+WD+A+ +R + + KK+PG S IE
Sbjct: 441 RIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIE 495
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 249/461 (54%), Gaps = 45/461 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH ++ L + + + V I A K+F M +++ + SMI Y L
Sbjct: 144 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 203
Query: 80 PSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+LF L +++ +W I+ SG
Sbjct: 204 RVALARRLFDLAPERDVVLW---------------------------NIMVSG------- 229
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
Y G M K+FD M +RD + N M++G+ GDV+ LF EM ER+V
Sbjct: 230 -------YIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNV 282
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SWN +I +G E LR F M D ++AT+V VL CARLGA+D+G+W+H
Sbjct: 283 FSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHV 342
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA + G ++ + VGNAL+D Y KCG+++ A VF+ + K++++WN+MI GLA +G G
Sbjct: 343 YAATIG-FKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGA 401
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+ QM G P+ TF+GVL C H GLVE+ F SM +SI P +EHYGCM
Sbjct: 402 DALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCM 461
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+ GR+G + A + ++ M + +A IW +LL +CR + +++LAE A+++LI LEP N
Sbjct: 462 VDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNP 521
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYVLLSNIY + GRW D L++ MR+ KK PG SLIE
Sbjct: 522 ANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIE 562
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 189/420 (45%), Gaps = 49/420 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + LL T L ++ A + H + + + V+ L ++ +A +F+
Sbjct: 24 LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 83
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P V L+N++ + Y N E V LF +K++ + P+ +TF +LK+C +G G+
Sbjct: 84 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 143
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H E+I+ G E + ++++Y+ + K+F M R+++ MI G+
Sbjct: 144 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 203
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
V LF ER VV WN+M+S + G A +LF M
Sbjct: 204 RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMP---------------- 247
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
YR +S N +++ Y G ++ +F+E+P +NV
Sbjct: 248 -----------------------YRDTMS-WNTMLNGYANNGDVEACEQLFEEMPERNVF 283
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKAR--ELF 357
SWN +I G A NG + +++M+ G V PN AT V VL+ CA G ++ + ++
Sbjct: 284 SWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVY 343
Query: 358 ASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
A+ G + + G ++D+ + G + A ++ SM ++ + W S++ THG
Sbjct: 344 AATIGFKGSI----YVGNALIDMYSKCGLIENAMEVFESMDLK-DLITWNSMICGLATHG 398
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 265/468 (56%), Gaps = 7/468 (1%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
R H +H LR L + L H + G+L + + + F++M + +V+ +N
Sbjct: 126 QAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGD---SRRFFDEMVDRNVVSWN 182
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
SMI Y+ G + E LF ++ G DE+T LL AC G+L +G+ VH ++ S
Sbjct: 183 SMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVS 242
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G + +V++Y CG + + F+ M + V+ M+ K G V+ F
Sbjct: 243 GSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWF 302
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
M ER++VSWN MIS + G+ EAL L+++M+ Q DE T+VAVL R+G +
Sbjct: 303 DHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLT 362
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G+ +H Y + +Y VS+ N+L+D Y KCG +DTA ++F E+ +NVVSWN +I GL
Sbjct: 363 VGKMVHLYIRDN-IYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGL 421
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A +GR + + M+ +P+ TFV +L+ C+H GL+E + F SM ++++
Sbjct: 422 AMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHE 481
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHY CMVD+LGR G + +A LI+ M ++P+ +WG+LL +CR HG+V++ +K+L+
Sbjct: 482 VEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLL 541
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LE + G +VL+SN+ E +W+D + LR M+E +K G S IE
Sbjct: 542 ELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIE 589
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 199/448 (44%), Gaps = 76/448 (16%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKL--HQSNLILAHFVSVCGTLNEIK-YATKIFNQMRNP 63
+LL + L Q+HAH L H S+L+LA + ++ + + +A ++F+ + P
Sbjct: 16 KLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLFDGIPGP 75
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+++N++I+AY + E ++L + GI P+E+T ++KAC VH
Sbjct: 76 DRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAVH 135
Query: 124 GEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
G +R G G + +G ++ Y S G + D + FDEM R+V+ N MI G+ + GD
Sbjct: 136 GVALRLGL--VGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGD 193
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
E LF EMR Q F DE T+V++L
Sbjct: 194 T-------------------------------REVCSLFGEMRRQGFLEDEFTLVSLLIA 222
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL----------------- 284
C++ G ++IG+ +H SG R + + +ALVD Y KCG L
Sbjct: 223 CSQEGNLEIGRLVHCRMLVSG-SRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVS 281
Query: 285 --------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+ AR F +P +N+VSWNAMIS G+ ++LY QM ++G+
Sbjct: 282 WTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGL 341
Query: 331 SPNKATFVGVLTCCAHAG--LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+P++ T V VL+ G V K L+ + P++ ++D+ + G V
Sbjct: 342 APDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYN---PDVSLVNSLLDMYAKCGQVDT 398
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
A L M R N W ++ HG
Sbjct: 399 AISLFSEMCNR-NVVSWNVIIGGLAMHG 425
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 267/454 (58%), Gaps = 1/454 (0%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
F R + QS L+ V + + + A K+F++M + V+ + +++ Y+ G +E
Sbjct: 157 FKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEA 216
Query: 85 VKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
++F ++ G WP+E T A +G L +G+ VH ++ SG ++ +V+
Sbjct: 217 WRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVD 276
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
++ CG + ++FD M +DV M+ + K GD++ LF+E+ R+ VSW+ M
Sbjct: 277 MFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCM 336
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
+++ ++ EA+R+F++M E +AT+V+VL CA+LG +D+G+ ++ S
Sbjct: 337 VAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHK 396
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
V++ NA +D + KCG + A +F+ + KNVVSWN MI A +G+ E + L++
Sbjct: 397 VELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQ 456
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+ A G+ P++ T++GVL+ C+H+GLV + R F M ++ I P EHY CM+D+LG+
Sbjct: 457 KFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKV 516
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLS 443
G + EA+++ RSM + + A WG+LL++CR HG+VE+ + A +L+ L+P +SG YVL+S
Sbjct: 517 GLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMS 576
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA +W + +R MR+ VKK+PG S IE
Sbjct: 577 QIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIE 610
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 9/231 (3%)
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
M+ ++G+ + AL LF + D T+V + A + + IH A G
Sbjct: 103 MMRGFLRAGKPAHALALFRRVLRDRLPADARTIV--FAVKAATTSSSPAEAIHCVAFKRG 160
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ V VGNALV Y L AR +F E+ ++VVSW ++ G A G + ++
Sbjct: 161 FIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVF 220
Query: 323 EQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGCMVDV 379
+M +A G PN+ T V + GL+ R + + +G+ V NLE+ +VD+
Sbjct: 221 CRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSV-NLEN--ALVDM 277
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
G+ GCV A ++ M I+ + W S++S+ G +E A KE+ N
Sbjct: 278 FGKCGCVASAKEIFDGMPIK-DVYSWTSMVSAYAKCGDLENAGKLFKEIPN 327
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A+ + HK+ + + F+ + ++ A+++F M + +V+ +N+MI A++L+G SE
Sbjct: 390 AYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSE 449
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-IRSGFERFGSIRIGV 141
E + LF K +GI+PDE T+ +L AC G + G+ E+ I G E +
Sbjct: 450 EALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACM 509
Query: 142 VELYTSCGQMDDGMKVFDEM 161
++L G +++ +V M
Sbjct: 510 IDLLGKVGLLEEAFEVARSM 529
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 272/490 (55%), Gaps = 14/490 (2%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ 59
++ + LL + HL QI LR HQS L F+ C ++ + YA +IFN
Sbjct: 32 KKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNY 91
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ P + ++N +IKA++ NG + V LF L+ G+ PD +T+ + KA +G++R G
Sbjct: 92 IDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREG 151
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK- 178
+ V+G +++SG E + ++++Y G++ + +VF+EM RDV+ N++I G+ K
Sbjct: 152 EKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKC 211
Query: 179 ---KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ VD +F +M ++V+ W M+S G+ EA LF + L A +
Sbjct: 212 RRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMI 271
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVV-----SVGNALVDFYCKCGILDTARNV 290
+ AV + + + S + V VG AL++ Y KCG ++ + +
Sbjct: 272 NGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTDAVVGTALIEMYAKCGFIEKSLEI 331
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F + K+ SW ++I GLA NG+ +EL+ +M+ GV P+ TF+GVL+ C+H GLV
Sbjct: 332 FNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLV 391
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI---WGS 407
E+ R+ F SMT ++ I P LEHYGC++D+LGR+G + EA +LI N I +G+
Sbjct: 392 EEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGA 451
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LLS+CRTHG+VE+ E K L+ +E +S + LL+NIYA RW+D +R M++ V
Sbjct: 452 LLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGV 511
Query: 468 KKSPGQSLIE 477
KK PG S +E
Sbjct: 512 KKVPGCSSVE 521
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 262/478 (54%), Gaps = 18/478 (3%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
++ L +IHAH L S A FV+ + + + YA + Q R ++L N ++
Sbjct: 28 QSQFRLREIHAHLLVSGRLASPSHHADFVASLASSSHLSYARLLLPQ-RPATLLAHNGLL 86
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV----------GDLRV---G 119
+A + GP P FA + L + PD Y+F L++A + D+ V
Sbjct: 87 RALA-RGPC--PGLAFAAFRELPLAPDHYSFTFLVRAATSLAAAASATPVPTDVAVNLLA 143
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VH + G ++ G V +Y + G + F E+ DV+ M+
Sbjct: 144 GSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVVCVTAMLGALSAG 203
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GDVD LF M +R V+WN M++ + GR EAL LF EM+ + E T+V+VL
Sbjct: 204 GDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVL 263
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA++GA++ G W+HSY S G+ R V++G ALVD Y KCG++ + VF+ + +N+
Sbjct: 264 TACAQMGALERGMWVHSYVCSRGM-RVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNI 322
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+W + +SGLA NG GE +EL+++M + G+ PN TFV VL C+ AGLVE+ R F S
Sbjct: 323 YTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDS 382
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M H + P LEHYGCMVD+ GR+G + +A D I SM + P+ +WG+LL++ R H +V+
Sbjct: 383 MKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVD 442
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L +HA+ +L +E N +VLLSNIYAE W +R M+ VKK PG S IE
Sbjct: 443 LGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIE 500
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 236/425 (55%), Gaps = 32/425 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F++M V+ +N+MI Y+ G S+E + LF ++ + P+E T +L AC
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
L +G + I G + ++++Y+ CG
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG----------------------- 310
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
D+ LF +M ER V+SWN+MI EAL LF EM E E
Sbjct: 311 --------DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T +++LP CA LGA+D+G+WIH+Y + S+ +L+D Y KCG + AR VF
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYI-NKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFD 421
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ K++ SWNAMI GLA +G+ + EL+ +M + G+ PN+ TFVG+L+ C HAGLV+
Sbjct: 422 GMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDL 481
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
++ F+SM + I P +HYGCM+D+LGR+G EA L+++M ++P+ AIWGSLL +C
Sbjct: 482 GQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGAC 541
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R HG VEL E + L LEP N G YVLLSNIYA G+WDD +R + + +KK PG
Sbjct: 542 RDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPG 601
Query: 473 QSLIE 477
+ IE
Sbjct: 602 CTTIE 606
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 245/500 (49%), Gaps = 50/500 (10%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQ 59
E L+LL + QIHAH ++ LH + L+ + S +I YA +FN
Sbjct: 29 EHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNS 88
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ P++ ++NSMI+ S++ + F + G+ P+ YTF LLK+C + G
Sbjct: 89 IEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEG 148
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H +++ GF I ++ +Y G+M++ VFD+ + RD I +I G+
Sbjct: 149 KQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALW 208
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G +D+ LF EM + VVSWN MI+ + GR EAL LF +MR +E+T+V+VL
Sbjct: 209 GYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVL 268
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+ A+D+G + S+ E GL + V NAL+D Y KCG L TAR +F ++ ++V
Sbjct: 269 SACAQSNALDLGNSMRSWIEDRGLCSNLKLV-NALIDMYSKCGDLQTARELFDDMLERDV 327
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE-------- 351
+SWN MI G + + L+ +M+A GV P + TF+ +L CAH G ++
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387
Query: 352 ---------------------------KARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
AR++F M + +L + M+ L G
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK-----IKSLASWNAMICGLAMHG 442
Query: 385 CVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN---LEPWNSGN 438
+A++L MS I PN + +LS+C+ G V+L + ++ + P S +
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISP-KSQH 501
Query: 439 YVLLSNIYAEGGRWDDAETL 458
Y + ++ G +++AE+L
Sbjct: 502 YGCMIDLLGRAGLFEEAESL 521
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 246/428 (57%), Gaps = 35/428 (8%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN-LGIWPDEYTFAPLLKACL 111
A K+F+++ ++ +NS++ Y+ G + E V++F L+ G PDE + +L AC
Sbjct: 171 ARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACG 230
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+GDL +G+ V G ++ G + I ++ +Y+ CG++ ++FD M RD I
Sbjct: 231 ELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI---- 286
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+WN IS+ ++G EA+ LFH M++ + +
Sbjct: 287 ---------------------------TWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ T+ AVL CA +GA+D+G+ + YA GL + V AL+D Y KCG L++A+ VF
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIF-VATALIDMYAKCGSLESAQRVF 378
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS--PNKATFVGVLTCCAHAGL 349
++PRKN SWNAMIS LA +G+ + + L+E+M +G S PN TFV +L+ C HAGL
Sbjct: 379 NDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGL 438
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V++ LF M+ L +VP +EHY CMVD+L R+G + EA+D+I M +P+ G+L
Sbjct: 439 VDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALH 498
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S+C+ +V++ E ++ L+ L+P NSGNY++ S IY WDDA +R MREN V K
Sbjct: 499 SACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTK 558
Query: 470 SPGQSLIE 477
+PG S IE
Sbjct: 559 TPGCSWIE 566
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 210/424 (49%), Gaps = 49/424 (11%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR-NP 63
+L LL + L QIH F H +H+ N +L+ +S L + Y+T IF+ + +P
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSIS----LKDFTYSTLIFSHITPHP 79
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKL--FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ FN M++A + + P+ L + +K L I P+ +TF + AC + ++R+ +
Sbjct: 80 NDYAFNIMLRATTTTW-HDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H E+ + G + +V +Y CG+ KVFDE++ +D++ N ++ G+ K G
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ + +F +RE S FE DE ++V+VL
Sbjct: 199 AREAVEVFGRLREES------------------------------GFEPDEMSLVSVLGA 228
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVS-VGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C LG +++G+W+ + G+ KV S +G+AL+ Y KCG L ++R +F +P ++ +
Sbjct: 229 CGELGDLELGRWVEGFVVERGM--KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI 286
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FA 358
+WNA IS A NG + + L+ M GV PNK T VL+ CA G ++ +++ +A
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 359 SMTGL-HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GL H I ++D+ + G + A + M R N A W +++S+ +HG
Sbjct: 347 THRGLQHDIFVAT----ALIDMYAKCGSLESAQRVFNDMP-RKNDASWNAMISALASHGK 401
Query: 418 VELA 421
+ A
Sbjct: 402 AKEA 405
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG E+ + +IF+ M + + +N+ I AY+ NG ++E + LF +K G+
Sbjct: 260 LISMYSKCG---ELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P++ T +L AC +G L +G+ + G + + ++++Y CG ++ +
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF++M ++ N MI G + L LF M + G S R
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDE------------GGSARP--- 421
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES-SGLYRKVVSVGNALV 275
++ T V++L C G VD G + + GL K+ + +V
Sbjct: 422 --------------NDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHY-SCMV 466
Query: 276 DFYCKCGILDTARNVFKEIPRK 297
D + G L A +V +++P K
Sbjct: 467 DLLSRAGHLYEAWDVIEKMPEK 488
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 250/461 (54%), Gaps = 45/461 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H ++ + + + + + A KIF +M +V+ + SMI Y L+
Sbjct: 157 QVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA 216
Query: 80 PSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+LF L +++ +W I+ SG
Sbjct: 217 DLVSARRLFDLAPERDVVLW---------------------------NIMVSG------- 242
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
Y G M + K+F EM +RDV+ N ++ G+ G+V+ LF EM ER++
Sbjct: 243 -------YIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNI 295
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHS 256
SWN +I +G E L F M ++ ++AT+V VL CARLGA+D+G+W+H
Sbjct: 296 FSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHV 355
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YAESSGL + V VGNAL+D Y KCGI++ A +VF+ + K+++SWN +I GLA + RG
Sbjct: 356 YAESSGL-KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGA 414
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+ QM G P+ TF+G+L C H GLVE F SM + I+P +EHYGCM
Sbjct: 415 DALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCM 474
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L R+G + +A +R M + + IW LL +CR + +VELAE A++ LI LEP N
Sbjct: 475 VDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNP 534
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV+LSNIY + GRW+D L++ MR+ KK PG SLIE
Sbjct: 535 ANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIE 575
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 267/525 (50%), Gaps = 54/525 (10%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLR-----HKLHQS----NLILAHFVSVCGTL---NEIKY 52
+LRLL HL + A R H H S N+ L + C L + +
Sbjct: 15 LLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLE 74
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKAC 110
++ + R +V FN +I+A + + + + LFA ++ G +PD YT+ LK+C
Sbjct: 75 SSSPDGRSRTTTVC-FNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSC 133
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
DL +G +H + + +R + + +Y+ CG+ +D +VFD M HRDV+ N
Sbjct: 134 SASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWN 193
Query: 171 LMIHGFCKKGDVDKGLYLFRE--------------------------------------M 192
MI GF + G D+ + +F++ M
Sbjct: 194 AMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNM 253
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ + ++SWN M++ + +A+ LF M E D T+ VLP C L A +G+
Sbjct: 254 QFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGK 313
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
IH + + ++ + NAL+D Y CG L AR +F + ++V+SW ++IS +
Sbjct: 314 RIHEIIKRKNMCPNLL-LENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKH 372
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G V+L+E+M+ +G+ P+ FV VL C+HAGL+ + F SMT + I+P EH
Sbjct: 373 GHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEH 432
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y CMVD+LGR+GC+ EAYD I +M I PN +WG+LL +CR H ++++ A L +L
Sbjct: 433 YTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLV 492
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P +G YVLLSN+YA GRW D ++R M +KK PG S++E
Sbjct: 493 PEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVE 537
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/524 (33%), Positives = 283/524 (54%), Gaps = 60/524 (11%)
Query: 8 LLHGRNTRTHLTQIHAH-----FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ--- 59
LL + T L IH+ FL H H LA + + L ++ A +F+
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPH----FLARLIILYSKLGDLHSARTLFDHRHH 86
Query: 60 -----MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+ P+ L N+M++AY+ G S E + L+ ++ +G+ + +T+ +LK C
Sbjct: 87 HHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASEL 146
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
G+ VHG+++R+GF + +V++Y CG++ D +VFD M RDV+ MI
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206
Query: 175 GFCKKGDVDKGLYLFREMRE---------------------------------------R 195
+ + K L LFR+M+E R
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEER 266
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ +SWN M+S ++GR ++AL LF++M+ + + T + ++ C+ LG+ +G+ +H
Sbjct: 267 NGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLH 326
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK--EIPRKNVVSWNAMISGLAFNG 313
++ SS + ++ NA++D Y KCG LDTA +F E+ ++V SWN +ISG +G
Sbjct: 327 NFVISSKMDIDT-TLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHG 385
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G+ +EL+ +M +GV PN TF +L+ C+HAGL+++ R+ FA MT L S+ P ++HY
Sbjct: 386 HGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHY 444
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
CMVD+LGR+G + EA+ LI+ + RP+ +WG+LL +CR HG+ EL E A L LEP
Sbjct: 445 ACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEP 504
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++G YVL+SNIYA +W + E +R M+ +KK S+IE
Sbjct: 505 EHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 548
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/472 (34%), Positives = 258/472 (54%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
R++ + ++H H L + Q + + + L + YA K+F++ R ++ ++N++
Sbjct: 90 RSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLRVGQCVHGEII 127
+A +L G EE + L+ + +G+ D +T+ +LKAC+ L G+ +H +
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLT 209
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R G+ I +V++Y + G VD Y
Sbjct: 210 RRGYNSHVYIMTTLVDMYA-------------------------------RFGCVDYASY 238
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE--LDEATVVAVLPICARL 245
+F M R+VVSW+ MI+ K+G+ EALR F EM + + + T+V+VL CA L
Sbjct: 239 VFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASL 298
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ IH Y GL ++ V +ALV Y +CG LD + VF + ++VVSWN++
Sbjct: 299 AALEQGRLIHGYILRRGL-DSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSL 357
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G ++++E+M+A G SP TFV VL C+H GLVE+ + LF SM H
Sbjct: 358 ISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHG 417
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P +EHY CMVD+LGR+ + EA +++ M P +WGSLL SCR HG+VELAE A
Sbjct: 418 IKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L LEP N+GNYVLL++IYAE WD+ + ++ + ++K PG+ +E
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+S N +I SL K G+ +ALR+ Q + T ++ C ++ G +H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQALRVL----SQESSPSQQTYELLILCCGHRSSLSDGLRVHRH 102
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+G + + L+ Y G +D AR VF + ++ + WNA+ L G GE
Sbjct: 103 ILDNGSDQDPF-LATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCA----HAGLVEKARELFASMT--GLHSIVPNLE 371
+ LY +M GV ++ T+ VL C A + K +E+ A +T G +S V +
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMT 221
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+VD+ R GCV A + M +R N W ++++ +G A +E++
Sbjct: 222 ---TLVDMYARFGCVDYASYVFNGMPVR-NVVSWSAMIACYAKNGKAFEALRTFREMMTE 277
Query: 432 EPWNSGNYVLLSNI 445
+S N V + ++
Sbjct: 278 TKDSSPNSVTMVSV 291
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 273/511 (53%), Gaps = 41/511 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNL----ILAHFVSVCGTLNEIKYATKIFNQMR 61
+ LL L Q+H ++ L + +L F S L + YA K+F+ +
Sbjct: 35 ISLLQNCKNPKDLIQLHTLLIKTSLIKEKYAFGRLLLSFASF-DNLGSLNYAQKLFDTVD 93
Query: 62 NP-SVLLFNSMIKAYSLNGPSEEPVKLFA--LLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
P + ++ +MIKAY+ G E ++ L ++P+++TF + AC +
Sbjct: 94 IPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFE 153
Query: 119 GQCVHGEIIRSGFE--------------RFGSIRIGV------------------VELYT 146
G+ H ++I+ FE + G + I V + Y
Sbjct: 154 GKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYV 213
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
G +D+ ++FDEM RDV+ +M+ G+ G + + LF EM +R++VSW+ +I
Sbjct: 214 KSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKG 273
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
+ G S+AL LF EM+ ++DE V +L CARLGA+D G+W+H Y + G+ +
Sbjct: 274 YIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGI-KV 332
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ AL+D Y KCG +D A VF+E K V W++MI GLA + GE +EL+ +MI
Sbjct: 333 DAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMI 392
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
G+ P++ T++ +L C H+GLV+ ++F M P ++HYGC+VD+LGR+G +
Sbjct: 393 ECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLL 452
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
+A+ ++ +M ++ + AIW +LLS+C+ H +VEL E + LI +EP N NYVL SN+Y
Sbjct: 453 HDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVY 512
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A RWD + LR M+ ++K+PG S IE
Sbjct: 513 AAVNRWDISGKLRREMKVRGMQKNPGCSSIE 543
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 262/527 (49%), Gaps = 77/527 (14%)
Query: 26 LRHKLHQSNLILAHFVSVCGT----------LNEIKYATKIFN-QMRNPSVLLFNSMIKA 74
LR+ L + + F++ C + L I +A ++F+ + L NSMIKA
Sbjct: 2 LRNALETNPNLFTKFIATCSSIALLAPLYDPLAGIVHARRMFDHRPHRDDAFLCNSMIKA 61
Query: 75 YSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-- 131
Y E L+ L +N PD +TF+ L K+C + GQ +H ++ GF
Sbjct: 62 YVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLAKSCALNMAIWEGQEIHSHVVAVGFCL 121
Query: 132 ------------ERFGSIR-----------------IGVVELYTSCGQMDDGMKVFDEMS 162
+FG + ++ Y G MD+ K+FD+M
Sbjct: 122 DLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVRSGDMDNAGKLFDQMI 181
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV------------------------ 198
+D N MI + K GD+ LF EM ERSVV
Sbjct: 182 EKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGYSSNGNLDSARSLFDA 241
Query: 199 -------SWNLMISSLGKSGRDSEALRLFHEMRD-QAFELDEATVVAVLPICARLGAVDI 250
SWN MIS ++ + EAL+LFHEM+ + E DE T+V+VLP A LGA+D+
Sbjct: 242 MPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDL 301
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G W+H + L R +VG AL+D Y KCG + +R VF +P K SWNA+I+ A
Sbjct: 302 GGWVHRFVRRKKLDR-ATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFA 360
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NGR + + L+ +M KG PN+ T +GVL+ C H+GLVE+ + F +M + P +
Sbjct: 361 INGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEEF-GLTPKI 419
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGCMVD+LGR+GC++EA L+ SM N I S L +C V AE +KE I
Sbjct: 420 EHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIK 479
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+E WN GNY++L N+YA RW +A+ ++ MR N VKK G S IE
Sbjct: 480 MEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIE 526
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H R KL ++ + + + EI + +F+ M +N++I A+++NG
Sbjct: 305 VHRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGR 364
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++E + LF + + G P+E T +L AC G + G+
Sbjct: 365 AKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGK 404
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 263/486 (54%), Gaps = 35/486 (7%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A ++ L+Q ++ F++ C + + A QM+ P+V ++N++ K +
Sbjct: 794 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
++L+ + + P YT++ L+KA R G+ + I + GF I+ ++
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLI 911
Query: 143 ELYTSCGQMDDGMKVFDEMSHRDVI-------------------------------VRNL 171
+ Y++ G++ + KVFDEM RD I N
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 971
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I+G+ G++++ LF +M + ++SW MI ++ R EA+ +F++M ++ D
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+ V+ CA LG ++IG+ +H Y +G V +G+ALVD Y KCG L+ A VF
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSALVDMYSKCGSLERALLVF 1090
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+P+KN+ WN++I GLA +G + ++++ +M + V PN TFV V T C HAGLV+
Sbjct: 1091 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 1150
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R ++ SM +SIV N+EHYG MV + ++G + EA +LI +M PNA IWG+LL
Sbjct: 1151 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 1210
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-S 470
CR H ++ +AE A +L+ LEP NSG Y LL ++YAE RW D +R MRE ++K
Sbjct: 1211 CRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 1270
Query: 471 PGQSLI 476
PG S I
Sbjct: 1271 PGTSSI 1276
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 253/430 (58%), Gaps = 3/430 (0%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ +A ++F++ V+ + +MI Y+ N +E + LF + + + P+E T LL A
Sbjct: 203 LGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSA 262
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C GD +G+ +H I R ++ ++++Y CG + ++F+ M RDV
Sbjct: 263 CSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSW 322
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-AF 228
+++G+ K GD+ LF EM ER++VSWN MI+ ++ + EAL LFH M D
Sbjct: 323 TSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGL 382
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIH-SYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E T+V VL +LG +++GQ IH ++ G+ ++ + NA++D Y KCG +D A
Sbjct: 383 VPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLI-LKNAVMDMYAKCGSIDAA 441
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F +P KN+VSWN+MIS A G + + L++QMI G+ P+ TF+GVL+ C++
Sbjct: 442 AKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYG 501
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G V + + F SM + P EHY CMVD+L R G ++EAY+LI M + + WG+
Sbjct: 502 GFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGA 561
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL +CR HG+VE+A+ A ++L+ L+P +SG Y LL+NI A+G +W D +R MRE V
Sbjct: 562 LLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGV 621
Query: 468 KKSPGQSLIE 477
KK PG SLIE
Sbjct: 622 KKVPGHSLIE 631
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 208/438 (47%), Gaps = 17/438 (3%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFN 58
I L +L ++ L QI AH L + ++ C + +I YA IF+
Sbjct: 51 ISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFD 110
Query: 59 QMRNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
Q P+ +N+MIK Y N PS +++N + D +F LKAC +
Sbjct: 111 QTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEF-DSGSFVFALKACGQFAEKI 169
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
VG VH I + GF+ ++ G+++ Y G + ++FDE S +DV+ MI+G+
Sbjct: 170 VGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYA 229
Query: 178 KKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHE-MRDQAFELDE 232
+ +D+ + LF M V V+ ++S+ + G DSE + HE +R +
Sbjct: 230 RNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKG-DSEMGKTLHEHIRRKDITCSL 288
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+ A+L + + G + + I + E R+ V +L++ Y K G L +AR +F
Sbjct: 289 NLLNAMLDMYVKCGCLTTAREIFNNME-----RRDVFSWTSLLNGYAKNGDLGSARKLFD 343
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVE 351
E+P +N+VSWNAMI+G + N + +EL+ M+ G+ P + T V VL+ G +E
Sbjct: 344 EMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLE 403
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+E+ + I +L ++D+ + G + A L SM + N W S++S+
Sbjct: 404 MGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEK-NLVSWNSMISA 462
Query: 412 CRTHGHVELAEHAVKELI 429
++GH + A ++I
Sbjct: 463 YASYGHAKKALTLFDQMI 480
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 8/267 (2%)
Query: 175 GFC---KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
FC GD+ +F + + WN MI K+ S F +M E D
Sbjct: 92 AFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFD 151
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ V L C + +G +HS G + + V N L+ Y + G L AR +F
Sbjct: 152 SGSFVFALKACGQFAEKIVGMAVHSVIWKRG-FDSDLFVQNGLIQNYVETGCLGFARQMF 210
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
E K+VV+W MI+G A N + + L+ M++ V PN+ T + +L+ C+ G E
Sbjct: 211 DESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSE 270
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ L + I +L M+D+ + GC+ A ++ +M R + W SLL+
Sbjct: 271 MGKTLHEHIR-RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNME-RRDVFSWTSLLNG 328
Query: 412 CRTHGHVELAEHAVKELI--NLEPWNS 436
+G + A E+ N+ WN+
Sbjct: 329 YAKNGDLGSARKLFDEMPERNIVSWNA 355
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFV----SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+IH + + Q +LIL + V + CG+ I A K+F+ M +++ +NSMI AY
Sbjct: 407 EIHCNHVNKIGIQVSLILKNAVMDMYAKCGS---IDAAAKLFHSMPEKNLVSWNSMISAY 463
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
+ G +++ + LF + G+ PD TF +L AC G + GQ H E + + F
Sbjct: 464 ASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQ-AHFESMENCF 518
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 249/461 (54%), Gaps = 45/461 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH ++ L + + + V I A K+F M +++ + SMI Y L
Sbjct: 186 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 245
Query: 80 PSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+LF L +++ +W I+ SG
Sbjct: 246 RVALARRLFDLAPERDVVLW---------------------------NIMVSG------- 271
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
Y G M K+FD M +RD + N M++G+ GDV+ LF EM ER+V
Sbjct: 272 -------YIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNV 324
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SWN +I +G E LR F M D ++AT+V VL CARLGA+D+G+W+H
Sbjct: 325 FSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHV 384
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA + G ++ + VGNAL+D Y KCG+++ A VF+ + K++++WN+MI GLA +G G
Sbjct: 385 YAATIG-FKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGA 443
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+ QM G P+ TF+GVL C H GLVE+ F SM +SI P +EHYGCM
Sbjct: 444 DALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCM 503
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+ GR+G + A + ++ M + +A IW +LL +CR + +++LAE A+++LI LEP N
Sbjct: 504 VDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNP 563
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYVLLSNIY + GRW D L++ MR+ KK PG SLIE
Sbjct: 564 ANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIE 604
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 189/420 (45%), Gaps = 49/420 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + LL T L ++ A + H + + + V+ L ++ +A +F+
Sbjct: 66 LEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHF 125
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P V L+N++ + Y N E V LF +K++ + P+ +TF +LK+C +G G+
Sbjct: 126 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 185
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H E+I+ G E + ++++Y+ + K+F M R+++ MI G+
Sbjct: 186 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 245
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
V LF ER VV WN+M+S + G A +LF M
Sbjct: 246 RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMP---------------- 289
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
YR +S N +++ Y G ++ +F+E+P +NV
Sbjct: 290 -----------------------YRDTMS-WNTMLNGYANNGDVEACEQLFEEMPERNVF 325
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKAR--ELF 357
SWN +I G A NG + +++M+ G V PN AT V VL+ CA G ++ + ++
Sbjct: 326 SWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVY 385
Query: 358 ASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
A+ G + + G ++D+ + G + A ++ SM ++ + W S++ THG
Sbjct: 386 AATIGFKGSI----YVGNALIDMYSKCGLIENAMEVFESMDLK-DLITWNSMICGLATHG 440
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 273/478 (57%), Gaps = 6/478 (1%)
Query: 5 ILRLLHGRNTRTHLT---QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+L+ LH T L Q H+ L L Q++L+ + ++ +F+ ++
Sbjct: 26 LLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQ 85
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ +V L+NS+I Y+ N E +LF + + + PD++T + L K +G L G+
Sbjct: 86 HKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG+ IR GF + ++ +Y CG ++ KVFDEM+ R+ N++I G+ G+
Sbjct: 146 IHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLP 240
+ G +F M+ R+V SW MI+ ++G EAL LF +M+ E + ++V+VLP
Sbjct: 206 LVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLP 265
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR-KNV 299
C+ + G+ IH +A L +V S+ NAL+D Y KCG LD+AR VF++ K+
Sbjct: 266 ACSSFSGLLSGRQIHGFAVRKELNNEV-SLCNALIDMYSKCGSLDSARRVFEDDSLCKDA 324
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW++MISG +G+G+ + LY++M+ G+ P+ T VG+L+ C+ +GLV + +++S
Sbjct: 325 ISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSS 384
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + I P LE + C+VD+LGR+G + A D I++M + P ++WG+L+S HG +E
Sbjct: 385 VINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLE 444
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ E A + LI LEP N NYV +SN+YA RWD +R M++ ++K PG S I
Sbjct: 445 MQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWIS 502
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 267/495 (53%), Gaps = 36/495 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPSVLLFNSMIKAY 75
LTQIH F++ + + + + C + + YA ++ P +FN++++ Y
Sbjct: 188 LTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGY 247
Query: 76 SLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
S + V +F + G I+PD ++FA ++KA LR G +H + ++ G +
Sbjct: 248 SESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSH 307
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI--------------------------V 168
+ ++ +Y CG + KVFDEM +++ V
Sbjct: 308 LFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLV 367
Query: 169 RN-----LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RN +M+ G+ K G+++ +F EM R VSW+ MI +G +E+ F E+
Sbjct: 368 RNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFREL 427
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+E ++ VL C++ GA + G+ +H + E SG Y +VSV NAL+D Y +CG
Sbjct: 428 LRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSG-YSWIVSVNNALIDMYSRCGN 486
Query: 284 LDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ AR VF+ + K ++VSW +MI+GLA +G GE + ++ +M GV P++ +F+ +L
Sbjct: 487 VPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLY 546
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C+HAGL+++ F+ M ++ I P +EHYGCMVD+ GRSG +++AY I M I P A
Sbjct: 547 ACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTA 606
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+W +LL +C +HG++ELAE + L L+P NSG+ VLLSN+YA G+W D ++R M
Sbjct: 607 IVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSM 666
Query: 463 RENNVKKSPGQSLIE 477
+KK SL+E
Sbjct: 667 IVQRIKKITAWSLVE 681
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 42/294 (14%)
Query: 160 EMSHRDVIVRNL----MIHGFCKKGDVDKGLYLFREM----------------------R 193
+++ +D +NL IHGF K VD Y ++
Sbjct: 174 KITRKDQYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFP 233
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQ 252
E +N ++ +S ++ +F EM + F D + V+ A ++ G
Sbjct: 234 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGF 293
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+H A GL + V L+ Y +CG + AR VF E+P+ N+V+WNA+++ F
Sbjct: 294 QMHCQALKHGLDSHLF-VATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTA-CFR 351
Query: 313 GRGELGV-ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G G E++++M+ + N ++ +L AG +E A+ +F+ M +
Sbjct: 352 GNDVSGAREIFDKMLVR----NHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDV----- 402
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAE 422
+ M+ +G E++ R + +RPN +LS+C G E +
Sbjct: 403 SWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGK 456
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 260/472 (55%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
R++ + ++H H L + Q + + + L + YA K+F++ R ++ ++N++
Sbjct: 90 RSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLRVGQCVHGEII 127
+A +L G EE + L+ + +G+ D +T+ +LKAC+ V L G+ +H +
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R G+ I +V++Y + G VD Y
Sbjct: 210 RRGYSSHVYIMTTLVDMYA-------------------------------RFGCVDYASY 238
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE--LDEATVVAVLPICARL 245
+F M R+VVSW+ MI+ K+G+ EALR F EM + + + T+V+VL CA L
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ IH Y GL ++ V +ALV Y +CG L+ + VF + ++VVSWN++
Sbjct: 299 AALEQGKLIHGYILRRGL-DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G+ ++++E+M+A G SP TFV VL C+H GLVE+ + LF +M H
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P +EHY CMVD+LGR+ + EA +++ M P +WGSLL SCR HG+VELAE A
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L LEP N+GNYVLL++IYAE WD+ + ++ + ++K PG+ +E
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 46/285 (16%)
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I N +I CK+G + + + + + S ++ L+I G S+ALR+ + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D ++ + + LG+VD
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDY------------------------------------ 130
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR VF + ++ + WNA+ L G GE + LY +M GV ++ T+ VL C
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 347 AGL----VEKARELFASMT--GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
+ + K +E+ A +T G S V + +VD+ R GCV A + M +R
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMT---TLVDMYARFGCVDYASYVFGGMPVR- 246
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
N W ++++ +G A +E++ +S N V + ++
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 242/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+MI Y+ G +E ++LF + + PDE T ++ A
Sbjct: 173 IENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 232
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++ +F+ + +
Sbjct: 233 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY------ 286
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ V+SWN +I EAL LF EM
Sbjct: 287 -------------------------KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 321
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 322 PNDVTMLSILPACAHLGAIDIGRWIHVYID-----KRLKGVANASSLRTSLIDMYAKCGD 376
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF I K++ SWNAMI G A +GR + +++ +M G+ P+ TFVG+L+
Sbjct: 377 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSA 436
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SMT + + P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 437 CSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 496
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP N G+YVLLSNIYA GRW++ R +
Sbjct: 497 IWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLN 556
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 557 DKGMKKVPGCSSIE 570
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 221/406 (54%), Gaps = 6/406 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
L IHA ++ LH +N L+ + C + + YA +F ++ P++L++N+M +
Sbjct: 6 LRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 65
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
++L+ +KL+ + +LG+ P+ YTF LLK+C + GQ +HG +++ G +
Sbjct: 66 HALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLD 125
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ ++ +Y G+++D KVFDE HRDV+ +I G+ +G ++ +F E+
Sbjct: 126 LYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPV 185
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VVSWN MIS ++G EAL LF +M DE+T+V V+ CA+ G++++G+ +
Sbjct: 186 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 245
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
HS+ + G + + + NAL+D Y KCG L+TA +F+ +P K+V+SWN +I G
Sbjct: 246 HSWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY- 373
+ + L+++M+ G +PN T + +L CAH G ++ R + + V N
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
++D+ + G + A+ + S+ + + + W +++ HG +
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 409
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 270/514 (52%), Gaps = 47/514 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKL------HQSNLILAHFVSVCGTLNEIKYATKIFN 58
++R R + + QIH H + + H L+L+ + G + YA K+F+
Sbjct: 1 MIRKGSARLSPRAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFRGRMG---YARKVFD 57
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG----IWPDEYTFAPLLKACLGVG 114
+ P + + N+M++ Y+ G P FA+ + + + PD +TF LL+AC G+
Sbjct: 58 GIPRPDLFMHNAMVRGYAHAGA---PGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLP 114
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ------------------------ 150
R G+ VHG +++ GF + +R ++ ++ CG
Sbjct: 115 GSRAGRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIA 174
Query: 151 -------MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
M K+FDE +H+D++ N+M+ + K G+++ LF E+ VVSWN +
Sbjct: 175 GHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTI 234
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
I+ G AL +F EMR + DEAT+V++L CA G +D G+ IH
Sbjct: 235 ITGYAAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERR 294
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+ VGNALV Y KCG L TA F + +V +WN++I GLAF+G+ E V ++
Sbjct: 295 PWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFK 354
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+M+ K + PN+ +F+ VL C+HAGLVE ++ F M + I PN HY C+VD+LGR+
Sbjct: 355 KMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRA 414
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLS 443
G + EAY ++ +M P+A +W +LL +CRTHG++ L + ++L+N+ S +YVLLS
Sbjct: 415 GLLDEAYAIVSNMRCEPSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLS 474
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA G W ET R M ++K+ G + I+
Sbjct: 475 GIYASSGEWLGVETERRSMDRRGIRKAAGYAQID 508
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 246/418 (58%), Gaps = 35/418 (8%)
Query: 66 LLFNSMIKAY-----SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
L+N++I+A+ GP+ P+ +F ++ G+ PD +TF LL++ L +G+
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGR 84
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +I+R G ++ ++ +Y+S G +D +F M R+VI + MI+G+ + G
Sbjct: 85 SVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRCG 144
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ L LFREM+ V +++R F T+ VL
Sbjct: 145 QYKEALALFREMQMLGV-----------------------NDVRPNEF-----TMSGVLA 176
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNV 299
C RLGA++ G+W H+Y + G+ VV +G AL+D Y KCG ++ A VF + P K+V
Sbjct: 177 ACGRLGALEHGKWAHAYIDKCGMPVDVV-LGTALIDMYAKCGSVEKATWVFSNLGPNKDV 235
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
++W+AMISGLA +G E V L+ +MI +GV PN TF+ V C H GLV + ++
Sbjct: 236 MAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRR 295
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
MT +SI+P ++HYGCMVD+ GR+G ++EA+++++SM + P+ +WG+LLS R HG +E
Sbjct: 296 MTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE 355
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A+K+LI LEP NSG YVLLSN+YA+ GRW+D +R M +KK PG SLIE
Sbjct: 356 TCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSLIE 413
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 44 CGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
CG+ ++ AT +F+ + N V+ +++MI +++G +EE V LF+ + N G+ P+ T
Sbjct: 216 CGS---VEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVT 272
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI-----GVVELYTSCGQMDDGMKV 157
F + AC+ G + G+ + +R E + I +V+LY G++ + V
Sbjct: 273 FLAVFCACVHGGLVSEGK----DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNV 328
Query: 158 FDEMS-HRDVIVRNLMIHGFCKKGDVDK---GLYLFREMRERSVVSWNLMISSLGKSGRD 213
M DV+V ++ G GD++ L E+ + ++ L+ + K GR
Sbjct: 329 VKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRW 388
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+ +RD L E + +P C+ +++G +H +
Sbjct: 389 EDV----RHVRD----LMETMGIKKVPGCS---LIEVGGVLHEF 421
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/478 (36%), Positives = 264/478 (55%), Gaps = 38/478 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLN--EIKYATKIFNQ-M 60
+LRL + + Q+HA LR + ++ +LA H + +L ++YA + + +
Sbjct: 22 LLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAVLTRVL 81
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P N++++ + S P AL PD +T+ PLL+AC + LR G+
Sbjct: 82 PDPDPFSLNTVLR---IAASSSRPSLALALHARRLAPPDTHTYPPLLQACARLLSLRHGE 138
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H E ++G ++ +V LY +CG + +VFDE+
Sbjct: 139 RIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIP------------------ 180
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ ER++VSWN M++ +GR +E L +F EM D F D TVV+VL
Sbjct: 181 -----------VGERNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLT 229
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNV 299
A +GA+ +G+ +H Y GL VGNAL+D Y KCG ++ AR VF+E+ R+ V
Sbjct: 230 ASAEIGALALGRRVHVYLTKVGLVENS-HVGNALIDLYAKCGGVEDARRVFEEMGARRTV 288
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSW ++I GLA NG G+ +EL+ M + + P + T VGVL C+H GLV+ F
Sbjct: 289 VSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNR 348
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M ++I P +EH GCMVD+LGR+G V+EAYD I +M + PNA +W +LL +C H +E
Sbjct: 349 MKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLE 408
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E A L+ L+P +SG+YVLLSN+YA GRW D LR M ++ V+K+PG+SL+E
Sbjct: 409 LGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVE 466
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 144/329 (43%), Gaps = 46/329 (13%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--- 60
++L L HG +IHA ++ L + V + G + A ++F+++
Sbjct: 130 RLLSLRHGE-------RIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVG 182
Query: 61 -RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
RN ++ +NSM+ ++ NG E + +F + ++ PD +T +L A +G L +G
Sbjct: 183 ERN--LVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALG 240
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VH + + G + +++LY CG ++D +VF+EM R
Sbjct: 241 RRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGAR--------------- 285
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
R+VVSW +I L +G EAL LF M + E T+V VL
Sbjct: 286 ---------------RTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVL 330
Query: 240 PICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RK 297
C+ G VD G + + E + ++ +G +VD + G + A + +P
Sbjct: 331 YACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLG-CMVDLLGRAGKVKEAYDYILTMPLEP 389
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMI 326
N V W ++ A + + ELG + +++
Sbjct: 390 NAVVWRTLLGACAMHKKLELGEAAWARLV 418
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/519 (35%), Positives = 265/519 (51%), Gaps = 71/519 (13%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ--MRNPSVLLFNSMIKAYSLNGPSEE 83
LRH + + I F+ + + I YA K+F+Q R+ S L NSMIKAY +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDS-FLSNSMIKAYLETRQYPD 60
Query: 84 PVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
L+ L K PD +TF L K+C + G +H +I R GF + GVV
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 143 EL-------------------------------YTSCGQMD------------------- 152
++ Y CG++D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 153 ---DGM----------KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
DG ++FDEM+H+ VI MIHG+C D+D LF M ER++VS
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN MI ++ + E + LF EM+ + + D+ T+++VLP + GA+ +G+W H +
Sbjct: 241 WNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ L +KV V A++D Y KCG ++ A+ +F E+P K V SWNAMI G A NG
Sbjct: 301 QRKKLDKKV-KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++L+ M+ + P++ T + V+T C H GLVE+ R+ F M + + +EHYGCMVD
Sbjct: 360 LDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G ++EA DLI +M PN I S LS+C + +E AE +K+ + LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL N+YA RWDD ++ MR+N KK G SLIE
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H R KL + + + + EI+ A +IF++M V +N+MI Y+LNG +
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ LF + + PDE T ++ A C HG ++ G + F +R
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITA-----------CNHGGLVEEGRKWFHVMR 401
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 250/461 (54%), Gaps = 45/461 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H ++ + + + + + A KIF +M +V+ + SMI Y L+
Sbjct: 220 QVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSA 279
Query: 80 PSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+LF L +++ +W I+ SG
Sbjct: 280 DLVSARRLFDLAPERDVVLW---------------------------NIMVSG------- 305
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
Y G M + K+F EM +RDV+ N ++ G+ G+V+ LF EM ER++
Sbjct: 306 -------YIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNI 358
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHS 256
SWN +I +G E L F M ++ ++AT+V VL CARLGA+D+G+W+H
Sbjct: 359 FSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHV 418
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YAESSGL + V VGNAL+D Y KCGI++ A +VF+ + K+++SWN +I GLA + RG
Sbjct: 419 YAESSGL-KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGA 477
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+ QM G P+ TF+G+L C H GLVE F SM + I+P +EHYGCM
Sbjct: 478 DALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCM 537
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+L R+G + +A +R M + + IW LL +CR + +VELAE A++ LI LEP N
Sbjct: 538 VDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNP 597
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV+LSNIY + GRW+D L++ MR+ KK PG SLIE
Sbjct: 598 ANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIE 638
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 263/439 (59%), Gaps = 21/439 (4%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLK 108
+K A F++M SV+ +N+M+ Y+ G EE ++LF +L + PDE T+A ++
Sbjct: 201 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 260
Query: 109 ACLGVGDLRVGQCVHGEIIRS-----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-- 161
+C +GD C+ I+R GF ++ +++++ CG ++ K+F+++
Sbjct: 261 SCSSLGD----PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 316
Query: 162 -SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+R + N MI + + GD+ +LF +M +R VSWN MI+ ++G +A++LF
Sbjct: 317 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 376
Query: 221 HEM--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
EM + + + DE T+V+V C LG + +G W S + + + + +SV N+L++ Y
Sbjct: 377 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHI-QISISVYNSLINMY 435
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
+CG + A +F+E+ +++VS+N +ISG A +G G +EL +M G+ P++ T++
Sbjct: 436 SRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYI 495
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
+LT C+HAGL+++ + LF S+ P+++HY CM+D+LGR+G + EA LI+SM +
Sbjct: 496 AILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPM 550
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+A I+GSLL++ H VEL E A +L +EP NSGNY LLSNIYA GRW + + +
Sbjct: 551 EPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKV 610
Query: 459 RMWMRENNVKKSPGQSLIE 477
R MR+ VKK+ G S +E
Sbjct: 611 RDTMRKQGVKKTTGLSWLE 629
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 214/475 (45%), Gaps = 82/475 (17%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+ + H LH N + ++ C L Y IF+ +P V +F M+K YS
Sbjct: 4 LLQLCIVLVHHSLHHQNHWVVLLLTQCTRFLAPSSYTCHIFHAATHPDVRVFTFMLKYYS 63
Query: 77 LNG-PSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G S+ V LF +L++ I P+ ++ ++K+ L + +++SG++R
Sbjct: 64 QIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAH-----VLKSGYDRD 118
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF------------------ 176
+R G++ +Y G ++ K+FDEM R V N+MI G+
Sbjct: 119 HYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGD 178
Query: 177 -----------------CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
KKG++ F +M ERSVVSWN M+S + G E +RL
Sbjct: 179 QEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRL 238
Query: 220 FHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWI------------------------ 254
F++M + DE T V+ C+ LG + + I
Sbjct: 239 FNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMH 298
Query: 255 ---------HSYAESSGLYRKVVSVG-NALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
H E G+Y+ SV NA++ Y + G L +A+++F ++P+++ VSWN+
Sbjct: 299 AKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNS 358
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVS--PNKATFVGVLTCCAHAGLVEKARELFASMTG 362
MI+G NG ++L+E+MI+ S P++ T V V + C H G + S+
Sbjct: 359 MIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGN-WAVSILK 417
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
++ I ++ Y ++++ R G +++A + + M+ R + + +L+S HGH
Sbjct: 418 VNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEHGH 471
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 248/465 (53%), Gaps = 54/465 (11%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
+T L Q H+ +R L N + + C I + + Q+ + +++ M+
Sbjct: 31 STMAELKQYHSQIIRLGLSADNDAMGRVIKFCA----ISKSGYLRWQLARNCIFMYSRML 86
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ P+++T+ PL++AC + G+ +H +++ GF
Sbjct: 87 HK--------------------SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
G ++ +Y + ++ +VFD M RD
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD--------------------------- 159
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R+ VSWN MI++ +S R EA LF MR + LD+ ++L C LGA++ G+
Sbjct: 160 --RNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGK 217
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
WIH Y E SG+ + ++D YCKCG L+ A VF E+P+K + SWN MI GLA +
Sbjct: 218 WIHGYIEKSGIELDS-KLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMH 276
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G+GE +EL+++M + V+P+ TFV VL+ CAH+GLVE+ + F MT + + P +EH
Sbjct: 277 GKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH 336
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
+GCMVD+LGR+G + EA LI M + P+A + G+L+ +CR HG+ EL E K++I LE
Sbjct: 337 FGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELE 396
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P NSG YVLL+N+YA GRW+D +R M + VKK+PG S+IE
Sbjct: 397 PHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIE 441
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 244/435 (56%), Gaps = 38/435 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+ + A K+F+++ V+ +N+MI Y NG EE ++LF + + PDE T ++
Sbjct: 145 DFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVS 204
Query: 109 ACLGVGDLRVGQCVHGEIIRS----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
AC G + +G+ VH + GF I +++LY+ CG
Sbjct: 205 ACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG--------------- 249
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ LF + + VVSWN +I + EAL LF EM
Sbjct: 250 ----------------DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML 293
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS--GLYRKVVSVGNALVDFYCKCG 282
++ T+++VLP CA LGA+DIG+WIH Y + G+ + S+ +L+D Y KCG
Sbjct: 294 RSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNET-SLRTSLIDMYAKCG 352
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
++ A VF + +++ SWNAMI G A +GR +L+ +M V P+ TFVG+L+
Sbjct: 353 DIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLS 412
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C+H+GL++ R++F SMT +++ P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 413 ACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDG 472
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
IW SLL +C+ HG++ELAE ++LI +EP NSG+YVLLSNIYA GRW+D +R +
Sbjct: 473 VIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVL 532
Query: 463 RENNVKKSPGQSLIE 477
+KK PG S IE
Sbjct: 533 NGKGMKKVPGCSSIE 547
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 203/378 (53%), Gaps = 9/378 (2%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ YA +F ++ P++L++N+M++ ++ + ++++ + +LG P+ Y+F LLK+
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 110 CLGVGDLRVGQCVHGEIIR--SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
C G+ +H ++++ G +R+ + ++ +Y G ++D KVFD SHRDV+
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRY--VHTSLISMYARNGGLEDARKVFDASSHRDVV 131
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+I G+ +GD +F E+ ER VVSWN MI+ ++GR EAL LF EM
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---YRKVVSVGNALVDFYCKCGIL 284
DE T+V+V+ CA+ G++++G+ +HS+ + + + + NAL+D Y KCG +
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+TA +F+ + K+VVSWN +I G + + L+++M+ G PN T + VL C
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC 311
Query: 345 AHAGLVEKARELFASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
AH G ++ R + + L + ++D+ + G + A+ + SM R ++
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS 371
Query: 404 IWGSLLSSCRTHGHVELA 421
W +++ HG A
Sbjct: 372 -WNAMIFGFAMHGRANAA 388
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 242/428 (56%), Gaps = 32/428 (7%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ YA ++F+ + S++ + +MI AY E V+LF + G++P+E T L+K
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKE 337
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G L +G+ +H +R+GF + +++Y CG + VFD
Sbjct: 338 CGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF-------- 389
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ + ++ W+ MISS ++ EA +F M
Sbjct: 390 -----------------------KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIR 426
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+E T+V++L ICA+ G++++G+WIHSY + G+ ++ + + VD Y CG +DTA
Sbjct: 427 PNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMI-LKTSFVDMYANCGDIDTAHR 485
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F E +++ WNAMISG A +G GE +EL+E+M A GV+PN TF+G L C+H+GL
Sbjct: 486 LFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGL 545
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+++ + LF M P +EHYGCMVD+LGR+G + EA++LI+SM +RPN A++GS L
Sbjct: 546 LQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFL 605
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
++C+ H +++L E A K+ ++LEP SG VL+SNIYA RW D +R M++ + K
Sbjct: 606 AACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVK 665
Query: 470 SPGQSLIE 477
PG S IE
Sbjct: 666 EPGVSSIE 673
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 190/411 (46%), Gaps = 36/411 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H +++ H + + + + + A +F+++ N V+ +++MI++Y +G
Sbjct: 145 EVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSG 204
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + L + + + P E + + DL++G+ +H ++R+G + +
Sbjct: 205 LLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL 264
Query: 140 --GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y C + +VFD +S +I
Sbjct: 265 CTALIDMYVKCENLAYARRVFDGLSKASII------------------------------ 294
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
SW MI++ +E +RLF +M + +E T+++++ C GA+++G+ +H++
Sbjct: 295 -SWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAF 353
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+G +V + A +D Y KCG + +AR+VF K+++ W+AMIS A N +
Sbjct: 354 TLRNGFTLSLV-LATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDE 412
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+++ M G+ PN+ T V +L CA AG +E + + S I ++ V
Sbjct: 413 AFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIH-SYIDKQGIKGDMILKTSFV 471
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
D+ G + A+ L + R + ++W +++S HGH E A +E+
Sbjct: 472 DMYANCGDIDTAHRLFAEATDR-DISMWNAMISGFAMHGHGEAALELFEEM 521
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 169/386 (43%), Gaps = 65/386 (16%)
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+I +Y N + K++A ++ D + +LKAC + +GQ VHG ++++G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + ++ +Y+ G + +FD++ ++DV+ + MI + + G +D+ L L R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M H MR + E+ ++ VL A L + +
Sbjct: 215 DM----------------------------HVMRVKPSEIGMISITHVL---AELADLKL 243
Query: 251 GQWIHSYAESSGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ +H+Y +G K V + AL+D Y KC L AR VF + + +++SW AMI+
Sbjct: 244 GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAY 303
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL------------- 356
GV L+ +M+ +G+ PN+ T + ++ C AG +E + L
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363
Query: 357 -----FASMTGLHSIV------------PNLEHYGCMVDVLGRSGCVREAYDLIRSMS-- 397
F M G V +L + M+ ++ C+ EA+D+ M+
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 398 -IRPNAAIWGSLLSSCRTHGHVELAE 422
IRPN SLL C G +E+ +
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGK 449
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 42/322 (13%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA LR+ S ++ F+ + G +++ A +F+ ++ ++++++MI +Y+ N
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNC 409
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+E +F + GI P+E T LL C G L +G+ +H I + G + ++
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTS 469
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
V++Y +CG +D ++F E + RD+ + N MI GF G + L LF EM V
Sbjct: 470 FVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPN 529
Query: 201 NLM----ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
++ + + SG E RLFH+M +H
Sbjct: 530 DITFIGALHACSHSGLLQEGKRLFHKM------------------------------VHE 559
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRG 315
+ G KV G +VD + G+LD A + K +P R N+ + + ++ +
Sbjct: 560 F----GFTPKVEHYG-CMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNI 614
Query: 316 ELGVELYEQMIAKGVSPNKATF 337
+LG +Q ++ + P+K+ +
Sbjct: 615 KLGEWAAKQFLS--LEPHKSGY 634
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 263/488 (53%), Gaps = 21/488 (4%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQM 60
++ L LL HL Q HA L + L+ ++ C + YA ++F ++
Sbjct: 6 KRCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERI 65
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P++ + N++IK + +NG +F + + G+ PD YT +LKAC + D +G+
Sbjct: 66 HHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGK 125
Query: 121 CVHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
VHG + G F+ F + ++ +Y+ CG + VFDEM + ++MI G+ K
Sbjct: 126 MVHGYSSKLGLVFDIF--VGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMISGYAK 183
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
GDVD F E E+ W MIS ++ E L LF ++ DE+ V++
Sbjct: 184 VGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSI 243
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEI 294
L CA LGA+DIG WIH Y L RK VS+ +L+D Y KCG L+ A+ +F +
Sbjct: 244 LSACAHLGALDIGIWIHRY-----LNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSM 298
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
P +++V WNAMISGLA +G G ++++ +M G+ P+ TF+ V T C+++G+ +
Sbjct: 299 PERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGL 358
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP-----NAAIWGSLL 409
+L M+ L+ I P EHYGC+VD+L R+G EA +IR ++ W + L
Sbjct: 359 QLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFL 418
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S+C HG +LAE A K L+ LE +SG YVLLSN+YA G+ DA +R MR V K
Sbjct: 419 SACCNHGQAQLAERAAKRLLRLEN-HSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDK 477
Query: 470 SPGQSLIE 477
+PG S +E
Sbjct: 478 APGCSSVE 485
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 269/485 (55%), Gaps = 15/485 (3%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNP 63
L L + + Q+HA L+ + + + +++ +N++ YA IF++++
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
S++ +N++IK Y N S + + LF L + + PD +T ++K C +G ++ G+ +H
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 138
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN-----------LM 172
G ++ GF ++ +V +Y+ CG++D KVFD M +DV++ N M
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAM 198
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I+G+ K GD D L LF +M +V+WNLMI+ +G+ +A+++F M
Sbjct: 199 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 258
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
AT+V+VL + L + G+WIHSY E +G + +G +L++ Y KCG +++A VF+
Sbjct: 259 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGI-LGTSLIEMYAKCGCIESALTVFR 317
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
I +K V W A+I GL +G + L+ +M G+ PN F+GVL C HAGLV+
Sbjct: 318 AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDD 377
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R+ F M + I P LEHYGC+VD+L R+G + EA + I +M I PN IW SLL
Sbjct: 378 GRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGS 437
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R HG +++ E+A + +I + P G Y+LLSN+YA G W+ +R M + +K PG
Sbjct: 438 RNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPG 497
Query: 473 QSLIE 477
S +E
Sbjct: 498 CSSVE 502
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 270/490 (55%), Gaps = 40/490 (8%)
Query: 21 IHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+HA + L N++ L H VC +L A +F+++ +V+ +N M+ YS
Sbjct: 206 LHALSFKLGLEALNIVATNLVHMYCVCSSLGN---ARVLFDEIPERNVVTWNVMLNGYSK 262
Query: 78 NG------------PSE-------------------EPVKLFALLKNLGIWPDEYTFAPL 106
+G P++ E ++++ + G+ P+E L
Sbjct: 263 SGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDL 322
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+ AC + GQ HG I+R+GF+ + I+ ++ Y +CG+++ F+ S V
Sbjct: 323 ISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHV 382
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
N +I GF + G +++ LF EM ER V SW+ MIS ++ + AL+LFHEM
Sbjct: 383 SSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAG 442
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ +E T+V+V A LG + G+W H Y S+ + ++ AL+D Y KCG +
Sbjct: 443 GVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLND-NLNAALIDMYAKCGSITI 501
Query: 287 ARNVFKEIPRK--NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F EI + +V WNA+I GLA +G + ++L+ Q+ + PN TF+GVL+ C
Sbjct: 502 ALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSAC 561
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
HAGLV+ + F M L++I PN++HYGCM+D+LGR+G ++EA ++IR M ++ + I
Sbjct: 562 CHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVI 621
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL++CRTHG+VE+ E A + L L+ + VLLSNIYA+ GRWDDA +R M+
Sbjct: 622 WGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQS 681
Query: 465 NNVKKSPGQS 474
+KKSPG S
Sbjct: 682 QRMKKSPGCS 691
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 219/474 (46%), Gaps = 46/474 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N++LA +V G+L+ ++ +F +M + + +M+ + N E + +F ++
Sbjct: 122 NIMLAGYVK-SGSLDNARH---LFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRF 177
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
G+ P+E T A ++ A VG + + +H + G E + +V +Y C + +
Sbjct: 178 AGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGN 237
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+FDE+ R+V+ N+M++G+ K G VD LF + + VVSW +I + R
Sbjct: 238 ARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERL 297
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---------- 263
EALR++ M +E +V ++ C R AV GQ H +G
Sbjct: 298 GEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATI 357
Query: 264 --------------------YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+ VS NAL+ + + G+++ AR +F E+P ++V SW+
Sbjct: 358 IHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWS 417
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+MISG + N + +L ++L+ +M+A GV PN+ T V V + A G + + R +A L
Sbjct: 418 SMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGR--WAHEYIL 475
Query: 364 HSIVP-NLEHYGCMVDVLGRSGCVREAYDLIRSMSIR-PNAAIWGSLLSSCRTHGHVELA 421
+ +P N ++D+ + G + A L + R + + W +++ HGH ++
Sbjct: 476 SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVS 535
Query: 422 EHAVKEL--INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR-----ENNVK 468
+L + ++P NS ++ + + G D E M+ E N+K
Sbjct: 536 LKLFSQLQRVRIKP-NSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIK 588
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 1/231 (0%)
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E T LK+C + L GQ +H + +SG ++ ++ Y C + + +FD
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
S D + N+M+ G+ K G +D +LF +M + VS+ M+ L ++ EA+ +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F +MR +E T+ +V+ + +G + + +H+ + GL + V LV YC
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGL-EALNIVATNLVHMYC 230
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
C L AR +F EIP +NVV+WN M++G + +G +L +L+E++ AK V
Sbjct: 231 VCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDV 281
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 102/239 (42%), Gaps = 44/239 (18%)
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F+ +D E T+V+ L C+ L A+ GQ IHS SGL + V N+L+ FY
Sbjct: 39 FFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIF-VKNSLISFY 97
Query: 279 CKC-------------------------------GILDTARNVFKEIPRKNVVSWNAMIS 307
KC G LD AR++F+++P K VS+ M+
Sbjct: 98 VKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVM 157
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA-----SMTG 362
GLA N + +++ M GV PN+ T V++ +H G + R L A +
Sbjct: 158 GLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEA 217
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
L+ + NL H C+ LG + R +D I N W +L+ G V+LA
Sbjct: 218 LNIVATNLVHMYCVCSSLGNA---RVLFDEIP----ERNVVTWNVMLNGYSKSGLVDLA 269
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 255/470 (54%), Gaps = 3/470 (0%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LL +T +++HA +R L + + ++ + + ++P+ +
Sbjct: 30 LLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTKDPTTIF 89
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+ S I A+S G + L + + + G+ P +T + L AC G L +G+ +H
Sbjct: 90 YTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRG---LSLGRALHAYAF 146
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ + ++ +Y G +FDEM V+ M+ + G +D
Sbjct: 147 KLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARR 206
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF + + + WN MI + G+ +EAL+LF M + E DE TVV VL A+LG
Sbjct: 207 LFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGT 266
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
V+ G+W+HSY ++S + V V ALVD YCKCG L+ A VF I K++V WNAMI+
Sbjct: 267 VESGKWLHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMIN 326
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G +E++ Q+ +G+ P TF+G+L C+H+GLVE+ R F SM + I
Sbjct: 327 GYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGID 386
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGCMVD+LGR+G + EA+ L++S++I P+A +W SLL++CR H ++ L +
Sbjct: 387 PKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADF 446
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ NSG Y+LLSNIYA G+W++ +R M+ + ++K PG S IE
Sbjct: 447 LVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIE 496
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/481 (35%), Positives = 263/481 (54%), Gaps = 8/481 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQM 60
++ L LLH L Q HA L+ LH SN +L+ ++ C + +A K+F +
Sbjct: 6 KRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHI 65
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++P++ +FN+MIKA L G + +F+ + GI PD YT +LKA + ++ +G+
Sbjct: 66 QHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGE 125
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H I+ G + ++ +Y S M +VFDEM + +MI+G+ G
Sbjct: 126 SIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMG 185
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DVD LF + W MIS ++ E L +F M+ E DEA +V +L
Sbjct: 186 DVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILS 245
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA +GA+D G WIH Y GL + V L+D Y KCG LD A+ +F E+ +++ V
Sbjct: 246 ACAHMGALDTGIWIHRYLGRLGL-PLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNV 304
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
WNAMISG+A +G GE ++L+ +M G+ P+ TF+ VL C+++G+V++ ++ M
Sbjct: 305 CWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRM 364
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI----RSMSIRPNAAIWGSLLSSCRTHG 416
+ +H I P EHYGC++D+L R G EA +I ++ S A W + LS+C HG
Sbjct: 365 STVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHG 424
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ AE A + L LE +SG YVLLSN+YA G+ +DA+ +R M+ V+K PG S I
Sbjct: 425 QTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSI 483
Query: 477 E 477
+
Sbjct: 484 K 484
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 253/459 (55%), Gaps = 35/459 (7%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H+ + LH +++ + +A K+F+++ ++ +NSMI Y+ G +
Sbjct: 139 HSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCA 198
Query: 82 EEPVKLFALL-KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E V++F + + G PDE + +L AC +GDL +G+ V G ++ G I
Sbjct: 199 REAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSA 258
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ +Y CG + ++FD M R V++W
Sbjct: 259 LISMYAKCGDLGSARRIFDG-------------------------------MAARDVITW 287
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N +IS ++G EA+ LFH M++ ++ T+ AVL CA +GA+D+G+ I YA
Sbjct: 288 NAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQ 347
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G ++ + V AL+D Y KCG L +A+ VFKE+P+KN SWNAMIS LA +G+ + +
Sbjct: 348 RG-FQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALS 406
Query: 321 LYEQMIAKG--VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
L++ M +G PN TFVG+L+ C HAGLV + LF M+ L +VP +EHY CMVD
Sbjct: 407 LFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVD 466
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L R+G + EA+DLI M +P+ G+LL +CR+ +V++ E ++ ++ ++P NSGN
Sbjct: 467 LLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGN 526
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y++ S IYA W+D+ +R+ MR+ + K+PG S IE
Sbjct: 527 YIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIE 565
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 254/439 (57%), Gaps = 16/439 (3%)
Query: 53 ATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
A +IF +M + P+++ + S+I +Y+ +G EE ++LF L++ G+ A ++
Sbjct: 127 ALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVIS 186
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C +G + +H ++ GFE + ++ ++ +Y G ++ +F EM ++ +
Sbjct: 187 ICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLAS 246
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERS---------VVSWNLMISSLGKSGRDSEALRL 219
N +I + G D+ L +F ++ ERS VVSW+ +I GR+ EAL L
Sbjct: 247 WNALITSHAEAGLCDEALEIFSQL-ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALEL 305
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F M+ + T+ VL +CA L A+ +G+ IH + + + ++ VGN LV+ Y
Sbjct: 306 FRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNIL-VGNGLVNMYA 364
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L +F++ RK+++SWN+MI+G +G G +E ++QMI G P+ TFV
Sbjct: 365 KCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVA 424
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ C+H+GLV + R LF M + I P +EHY CMVD+LGR+G +REA +++++M +
Sbjct: 425 VLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVA 484
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGNYVLLSNIYAEGGRWDDAETL 458
PNA +WG+LL+SCR H + E+AE L NL +G Y+LLSNIYA GRW+D+ +
Sbjct: 485 PNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARV 544
Query: 459 RMWMRENNVKKSPGQSLIE 477
R + +KK+PGQS I+
Sbjct: 545 RTSAKTKGLKKNPGQSWIK 563
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 170/368 (46%), Gaps = 44/368 (11%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
++ +G D +TF +++AC +G +G+ +HG ++ GF+ + ++ +Y G+
Sbjct: 33 MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISS 206
M D +FD MS R I N M+ + D + L +F+ M E ++V+W +ISS
Sbjct: 93 MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISS 152
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG---- 262
+SG EA+ LF MR + E+ + V+ ICA LGA + IH YA G
Sbjct: 153 YARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEY 212
Query: 263 --------------------------LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+ K ++ NAL+ + + G+ D A +F ++ R
Sbjct: 213 SFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLER 272
Query: 297 K--------NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
NVVSW+A+I G A GR + +EL+ +M + N T VL+ CA
Sbjct: 273 SGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELA 332
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
+ RE+ + +V N+ +V++ + GC++E + +I + R + W S+
Sbjct: 333 ALHLGREIHGHVVRA-VMVNNILVGNGLVNMYAKCGCLKEGH-MIFEKTERKDLISWNSM 390
Query: 409 LSSCRTHG 416
++ HG
Sbjct: 391 ITGYGMHG 398
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 49/280 (17%)
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D T V+ CA +G+ +G+ IH + G ++ + VGN L+ Y K G + AR++
Sbjct: 41 DGFTFPLVIRACAYMGSFILGKTIHGHVLEMG-FQSHLHVGNELIGMYAKLGRMRDARHL 99
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F + ++ +SWN M+S AFN +E++++M ++G+ PN T+ +++ A +G
Sbjct: 100 FDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWH 159
Query: 351 EKARELFA--SMTGL----------------------------HSIVPNLEHY----GCM 376
E+A ELF M G+ +++ E Y +
Sbjct: 160 EEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSAL 219
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE---- 432
+ V G+ G V A++L M + A+ W +L++S H L + A++ LE
Sbjct: 220 ICVYGKHGDVNGAWNLFLEMKNKSLAS-WNALITS---HAEAGLCDEALEIFSQLERSGD 275
Query: 433 -PWNSGNYVLLSNI---YAEGGRWDDAETLRMWMRENNVK 468
P N V S I +A GR + E L ++ R + K
Sbjct: 276 CPRLRPNVVSWSAIIDGFASKGR--EKEALELFRRMQHAK 313
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IH H +R + + L+ L + + CG L E IF + ++ +NSMI Y
Sbjct: 339 EIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKE---GHMIFEKTERKDLISWNSMITGYG 395
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
++G ++ F + LG PD TF +L +C G + G+ + ++++
Sbjct: 396 MHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLK 447
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 246/428 (57%), Gaps = 35/428 (8%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN-LGIWPDEYTFAPLLKACL 111
A K+F+++ ++ +NS++ Y+ G + E V++F L+ G PDE + +L AC
Sbjct: 171 ARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACG 230
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+GDL +G+ V G ++ G + I ++ +Y+ CG++ ++FD M RD
Sbjct: 231 ELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDF----- 285
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
++WN IS+ ++G EA+ LFH M++ + +
Sbjct: 286 --------------------------ITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ T+ AVL CA +GA+D+G+ + YA GL + V AL+D Y KCG L++A+ VF
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIF-VATALIDMYAKCGSLESAQRVF 378
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS--PNKATFVGVLTCCAHAGL 349
++PRKN SWNAMIS LA +G+ + + L+E+M +G S PN TFV +L+ C HAGL
Sbjct: 379 NDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGL 438
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V++ LF M+ L +VP +EHY CMVD+L R+G + EA+D+I M +P+ G+L
Sbjct: 439 VDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALH 498
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S+C+ +V++ E ++ L+ L+P NSGNY++ S IY WDDA +R MREN V K
Sbjct: 499 SACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTK 558
Query: 470 SPGQSLIE 477
+PG S IE
Sbjct: 559 TPGCSWIE 566
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 210/424 (49%), Gaps = 49/424 (11%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR-NP 63
+L LL + L QIH F H +H+ N +L+ +S L + Y+T IF+ + +P
Sbjct: 24 LLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSIS----LKDFTYSTLIFSHITPHP 79
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKL--FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ FN M++A + + P+ L + +K L I P+ +TF + AC + ++R+ +
Sbjct: 80 NDYAFNIMLRATTTTW-HDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H E+ + G + +V +Y CG+ KVFDE++ +D++ N ++ G+ K G
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ + +F +RE S FE DE ++V+VL
Sbjct: 199 AREAVEVFGRLREES------------------------------GFEPDEMSLVSVLGA 228
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVS-VGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C LG +++G+W+ + G+ KV S +G+AL+ Y KCG L ++R +F +P ++ +
Sbjct: 229 CGELGDLELGRWVEGFVVERGM--KVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI 286
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FA 358
+WNA IS A NG + + L+ M GV PNK T VL+ CA G ++ +++ +A
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346
Query: 359 SMTGL-HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GL H I ++D+ + G + A + M R N A W +++S+ +HG
Sbjct: 347 THRGLQHDIFVA----TALIDMYAKCGSLESAQRVFNDMP-RKNDASWNAMISALASHGK 401
Query: 418 VELA 421
+ A
Sbjct: 402 AKEA 405
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 34/262 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG E+ + +IF+ M + + +N+ I AY+ NG ++E + LF +K G+
Sbjct: 260 LISMYSKCG---ELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGV 316
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P++ T +L AC +G L +G+ + G + + ++++Y CG ++ +
Sbjct: 317 DPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQR 376
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF++M ++ N MI G + L LF M + G S R
Sbjct: 377 VFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDE------------GGSARP--- 421
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES-SGLYRKVVSVGNALV 275
++ T V++L C G VD G + + GL K+ + +V
Sbjct: 422 --------------NDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHY-SCMV 466
Query: 276 DFYCKCGILDTARNVFKEIPRK 297
D + G L A +V +++P K
Sbjct: 467 DLLSRAGHLYEAWDVIEKMPEK 488
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 244/397 (61%), Gaps = 5/397 (1%)
Query: 85 VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
++ +A + LG+ D +T +LK+C + + +G+CVHG+ +R G E + ++++
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y CG + D K+FD+M RD+ N +I G+ K+G++ LF M R++VSW MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDE--ATVVAVLPICARLGAVDIGQWIHSYAESSG 262
S ++G +AL LF EM E+ T+V+VLP CA+ A++ G+ IH +A G
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIG 271
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLAFNGRGELGVE 320
L+ SV AL Y KC L AR F I + KN+++WN MI+ A +G G V
Sbjct: 272 LHLNS-SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVS 330
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
++E M+ GV P+ TF+G+L+ C+H+GL++ F M +HS+ P +EHY C+VD+L
Sbjct: 331 IFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLL 390
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+G + EA +LI M ++ ++WG+LL++CR+H ++E+AE A + L LEP NSGNYV
Sbjct: 391 GRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYV 450
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSN+YAE G W++ + LR ++ +KKSPG S IE
Sbjct: 451 LLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIE 487
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 147/377 (38%), Gaps = 74/377 (19%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQ------------------ 59
+H LR L + A + + CG + + A K+F++
Sbjct: 129 VHGQGLRVGLEGDFYVGASLIDMYVKCGVIGD---ARKLFDKMIVRDMASWNALIAGYMK 185
Query: 60 -------------MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFA 104
M + +++ + +MI Y+ NG +E+ + LF + G + P+ T
Sbjct: 186 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIV 245
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC L G+ +H G S++ + +Y C + + F
Sbjct: 246 SVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF------ 299
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D+I +N +++++WN MI++ G EA+ +F M
Sbjct: 300 DMIAQN-----------------------GKNLIAWNTMITAYASHGCGVEAVSIFENML 336
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCG 282
+ D T + +L C+ G +D G ++ + + ++ V + +VD + G
Sbjct: 337 RAGVQPDAVTFMGLLSGCSHSGLIDAG--LNHFNDMGTIHSVEPRVEHYACVVDLLGRAG 394
Query: 283 ILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
L A+ + ++P + S W A+++ + E+ EL + + N +V +
Sbjct: 395 RLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIA-ELAARRLFVLEPDNSGNYVLLS 453
Query: 342 TCCAHAGLVEKARELFA 358
A AG+ E+ ++L A
Sbjct: 454 NLYAEAGMWEEVKKLRA 470
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 252/461 (54%), Gaps = 33/461 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q HAH + H+S +L +++ I Y ++F + +P LFNS+IKA S
Sbjct: 26 LQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSN 85
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G S + V + + + I P YTF ++KAC + LR+G VH + SG+ +
Sbjct: 86 FGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFV 145
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ +V Y KVFDEM +RS+
Sbjct: 146 QAALVTFYAKSCTPRVARKVFDEMP-------------------------------QRSI 174
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
++WN MIS ++G SEA+ +F++MR+ E D AT V+VL C++LG++D+G W+H
Sbjct: 175 IAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHEC 234
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+G+ VV + +LV+ + +CG + AR VF + NVVSW AMISG +G G
Sbjct: 235 IVGTGIRMNVV-LATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVE 293
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+E++ +M A GV PN+ T+V VL+ CAHAGL+ + R +FASM + +VP +EH+ CMV
Sbjct: 294 AMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMV 353
Query: 378 DVLGRSGCVREAYDLIRSMSIRP-NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
D+ GR G + EAY +R +S A+W ++L +C+ H + +L + LI+ EP N
Sbjct: 354 DMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENP 413
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+YVLLSN+YA GR D E++R M + +KK G S I+
Sbjct: 414 GHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTID 454
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 251/451 (55%), Gaps = 65/451 (14%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
+L+N + P + +F+ +L++C G+ ++G+ H +I++ GFE ++ G+++ Y G
Sbjct: 1 MLRN-DVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVG 59
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMI-----HGF--------------------------CK 178
+ +VF M RDV+ N MI HG+ CK
Sbjct: 60 DLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCK 119
Query: 179 KGDVDKGLYLF---------------------------REM-----RERSVVSWNLMISS 206
GD++ +F +E+ R+ V+WN MIS+
Sbjct: 120 LGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA 179
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
+ G A+ +F +M+ + + E T+V++L CA LGA+D+G+WIH Y + L
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
VV +GNAL+D YCKCG L+ A +VF + RKN+ WN++I GL NGRGE + + M
Sbjct: 240 VV-LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 298
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+G+ P+ TFVG+L+ C+H+GL+ + F+ M G++ + P +EHYGCMVD+LGR+G +
Sbjct: 299 KEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYL 358
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
+EA +LIR+M ++PN+ + GSLL +C+ H +L E ++L+ L+P + GNYV LSN+Y
Sbjct: 359 KEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLY 418
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A RWDD T R M + V K+PG S IE
Sbjct: 419 ASLSRWDDVNTCRKLMIKRGVHKTPGCSSIE 449
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 36/262 (13%)
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+MI AY G + +F +++ + P E T LL AC +G L +G+ +HG I
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ + ++++Y CG ++ + VF +S +++ FC
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNI---------FC---------- 273
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
WN +I LG +GR EA+ F M + + D T V +L C+ G
Sbjct: 274 ------------WNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 321
Query: 248 VDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGILDTARNVFKEIPRK-NVVSWNA 304
+ GQ ++E G+Y V +VD + G L A + + +P K N + +
Sbjct: 322 LSAGQ--RYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGS 379
Query: 305 MISGLAFNGRGELGVELYEQMI 326
++ + +LG ++ +Q++
Sbjct: 380 LLRACQIHKDTKLGEQVTQQLL 401
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L + A +F+ + ++ +NS+I +NG EE + F +++ GI PD TF
Sbjct: 253 CGAL---EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTF 309
Query: 104 APLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+L C G L GQ E+ + G E +G + V+L G + + +++
Sbjct: 310 VGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCM----VDLLGRAGYLKEALELI 365
Query: 159 DEMSHRD------VIVRNLMIHGFCKKGD-----------VDKGLYLFREMRERSVVSWN 201
M + ++R IH K G+ D G Y+F S+ W+
Sbjct: 366 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 425
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 172/505 (34%), Positives = 268/505 (53%), Gaps = 36/505 (7%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNPSV 65
LL + +L Q+HA+ + L +I + S + + YA ++F NP V
Sbjct: 11 LLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDV 70
Query: 66 LLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ N++I+ + + P + + + L D ++FA LLKA L G +H
Sbjct: 71 FMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHC 130
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV---------------- 168
+ I G + + +V +Y+ CG + KVF+EM +V+
Sbjct: 131 QAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKG 190
Query: 169 ----------RNL-----MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
RNL M+ G+ K G+++ LF EM + VSW+ MI +G
Sbjct: 191 ADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFF 250
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EA F E++ +E ++ L CA GA++ G+ +H + E SG + +VSV NA
Sbjct: 251 YEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSG-FLWMVSVNNA 309
Query: 274 LVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
L+D Y KCG + AR VF+ +P K ++VSW +MI+GLA +G GE ++L+ +M G+ P
Sbjct: 310 LLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRP 369
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
+ F+ +L C+HAGL+EK E F M +++I P +EHYGCMVD+ GR+G + +AY+
Sbjct: 370 DGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEF 429
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
I M + P A IW +LL +C HG+V+LAE + L L+P NSG++VLLSNIYA G+W
Sbjct: 430 IIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKW 489
Query: 453 DDAETLRMWMRENNVKKSPGQSLIE 477
D +R M + + K+PG S+IE
Sbjct: 490 KDVAAVRRSMTDQRMNKTPGWSMIE 514
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 263/439 (59%), Gaps = 21/439 (4%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLK 108
+K A F++M SV+ +N+M+ Y+ G EE ++LF +L + PDE T+A ++
Sbjct: 144 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVIS 203
Query: 109 ACLGVGDLRVGQCVHGEIIRS-----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-- 161
+C +GD C+ I+R GF ++ +++++ CG ++ K+F+++
Sbjct: 204 SCSSLGD----PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 259
Query: 162 -SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+R + N MI + + GD+ +LF +M +R VSWN MI+ ++G +A++LF
Sbjct: 260 YKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLF 319
Query: 221 HEM--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
EM + + + DE T+V+V C LG + +G W S + + + + +SV N+L++ Y
Sbjct: 320 EEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHI-QISISVYNSLINMY 378
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
+CG + A +F+E+ +++VS+N +ISG A +G G +EL +M G+ P++ T++
Sbjct: 379 SRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYI 438
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
+LT C+HAGL+++ + LF S+ P+++HY CM+D+LGR+G + EA LI+SM +
Sbjct: 439 AILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPM 493
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+A I+GSLL++ H VEL E A +L +EP NSGNY LLSNIYA GRW + + +
Sbjct: 494 EPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKV 553
Query: 459 RMWMRENNVKKSPGQSLIE 477
R MR+ VKK+ G S +E
Sbjct: 554 RDTMRKQGVKKTTGLSWLE 572
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 192/421 (45%), Gaps = 81/421 (19%)
Query: 71 MIKAYSLNG-PSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
M+K YS G S+ V LF +L++ I P+ ++ ++K+ L + +++
Sbjct: 1 MLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAH-----VLK 55
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF------------ 176
SG++R +R G++ +Y G ++ K+FDEM R V N+MI G+
Sbjct: 56 SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTL 115
Query: 177 -----------------------CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
KKG++ F +M ERSVVSWN M+S + G
Sbjct: 116 FHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAP 175
Query: 214 SEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWI------------------ 254
E +RLF++M + DE T V+ C+ LG + + I
Sbjct: 176 EETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKT 235
Query: 255 ---------------HSYAESSGLYRKVVSVG-NALVDFYCKCGILDTARNVFKEIPRKN 298
H E G+Y+ SV NA++ Y + G L +A+++F ++P+++
Sbjct: 236 ALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRD 295
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVS--PNKATFVGVLTCCAHAGLVEKAREL 356
VSWN+MI+G NG ++L+E+MI+ S P++ T V V + C H G +
Sbjct: 296 TVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGN-W 354
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
S+ ++ I ++ Y ++++ R G +++A + + M+ R + + +L+S HG
Sbjct: 355 AVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEHG 413
Query: 417 H 417
H
Sbjct: 414 H 414
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 136/321 (42%), Gaps = 40/321 (12%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
++S++ +S + ++ A +F++M + +NSMI Y+ NG S + +KLF
Sbjct: 262 YRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEE 321
Query: 91 L--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
+ PDE T + AC +G+L +G + + + S+ ++ +Y+ C
Sbjct: 322 MISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRC 381
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G M D + +F EM+ RD++ N +I GF +
Sbjct: 382 GSMQDAVLIFQEMATRDLVSYNTLISGFAEH----------------------------- 412
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
G E++ L +M++ E D T +A+L C+ G +D GQ + + V
Sbjct: 413 --GHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLF-----ESIKFPDV 465
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
++D + G L+ A + + +P + + ++++ + + + ELG EL +
Sbjct: 466 DHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELG-ELAAAKLF 524
Query: 328 KGVSPNKATFVGVLTCCAHAG 348
K N + + A AG
Sbjct: 525 KVEPHNSGNYALLSNIYASAG 545
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 249/428 (58%), Gaps = 13/428 (3%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L+ ++ A K+F +M + + + + +MI A G +E L D+ F
Sbjct: 273 LSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLL----------DKMPFDSF 322
Query: 107 L-KACLGVGDLRVGQCVHGEIIRSGFE-RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
K L G L+ +I G E R ++ Y CG +D+ M +F +M ++
Sbjct: 323 AAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNK 382
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N MI G+ G + K + +FR+M +R+ VSWN +IS ++G EAL+ F MR
Sbjct: 383 DMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMR 442
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
A D +T L CA L A+ +G+ HS SG Y GNAL+ Y KCG +
Sbjct: 443 RDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSG-YIGDSFAGNALISAYAKCGRI 501
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR VF E+P ++VSWNA+I G A NG G + ++ +M V P++ TFVGVL+ C
Sbjct: 502 LEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSAC 561
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAGL+++ + F SMT +++ P EHY CMVD+LGRSG + EA+++I+ M ++PNA +
Sbjct: 562 SHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGV 621
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG++L +CR H + ELA+ A ++L LEP + NYVLLSNI AE G+WD+A+ +R++++E
Sbjct: 622 WGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKE 681
Query: 465 NNVKKSPG 472
V K+PG
Sbjct: 682 RGVHKTPG 689
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 145/310 (46%), Gaps = 21/310 (6%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GQ+ ++FD M R+ + N M+ + G + LF E+ R+ VSWN MI++
Sbjct: 25 GQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACS 84
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
GR ++A LF M + D + ++ AR G + + + + G K
Sbjct: 85 DHGRVADARDLFDAMPAR----DGFSWTLMVSCYARAGELGLAR--DALDRMPG--DKCT 136
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+ NA++ Y K G D A + +E+P +++SWN+++ GL NG V+ +++M A+
Sbjct: 137 ACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPAR 196
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+ ++ +L AG V+ A LFA + PN+ + +++ R+G + E
Sbjct: 197 ----DMVSWNLMLEGYVRAGDVDSAAGLFAGVPS-----PNVVSWVTLLNGYCRAGRIGE 247
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +L + R N A W +LS H+ E A K + NS ++ + +
Sbjct: 248 ARELFDRIPDR-NVAAWNVMLSGYLRLSHM---EEAYKLFTEMPDKNSISWTTMISALVR 303
Query: 449 GGRWDDAETL 458
GG+ +A+ L
Sbjct: 304 GGKLQEAKDL 313
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 181/425 (42%), Gaps = 63/425 (14%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A K F++M ++ +N M++ Y G + LFA + + P+ ++ LL
Sbjct: 182 EMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS----PNVVSWVTLLN 237
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
Y G++ + ++FD + R+V
Sbjct: 238 G-----------------------------------YCRAGRIGEARELFDRIPDRNVAA 262
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N+M+ G+ + +++ LF EM +++ +SW MIS+L + G+ EA L +M +F
Sbjct: 263 WNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSF 322
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
A + L + +D + I GL + N ++ Y CG+LD A
Sbjct: 323 AAKTALMHGYL----QSKMIDDARLIF-----DGLEVRDAVCWNTMISGYVHCGMLDEAM 373
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+F+++P K++VSWN MI+G A +G+ V ++ +M + N ++ V++ G
Sbjct: 374 VLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR----NTVSWNSVISGFVQNG 429
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV---REAYDLIRSMSIRPNAAIW 405
L +A + F M + + Y C + + R+ + L+ ++
Sbjct: 430 LCVEALQHFVLMR-RDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAG 488
Query: 406 GSLLSSCRTHGHVELAEHAVKEL--INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+L+S+ G + A E+ ++ WN+ L + YA G +A ++ M
Sbjct: 489 NALISAYAKCGRILEARQVFDEMPAPDIVSWNA-----LIDGYASNGHGTEAISVFREME 543
Query: 464 ENNVK 468
+N+V+
Sbjct: 544 DNDVR 548
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 170/391 (43%), Gaps = 30/391 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M + + + +N+M+ A + +G + +LF + + ++ ++
Sbjct: 26 QLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR----RNTVSWNAMIA 81
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVI 167
AC G RV ++ + R G +V Y G++ D M +
Sbjct: 82 ACSDHG--RVADAR--DLFDAMPARDGFSWTLMVSCYARAGELGLARDALDRMPGDKCTA 137
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N MI G+ K G D + L REM ++SWN ++ L ++G A++ F EM +
Sbjct: 138 CYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPAR- 196
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
D + +L R G VD + + S + V L++ YC+ G + A
Sbjct: 197 ---DMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVT-----LLNGYCRAGRIGEA 248
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
R +F IP +NV +WN M+SG E +L+ +M K N ++ +++
Sbjct: 249 RELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDK----NSISWTTMISALVRG 304
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G +++A++L M +G + +S + +A + + +R +A W +
Sbjct: 305 GKLQEAKDLLDKMPFDSFAAKTALMHGYL-----QSKMIDDARLIFDGLEVR-DAVCWNT 358
Query: 408 LLSSCRTHGHVELAEHAVKELINLE--PWNS 436
++S G ++ A +++ N + WN+
Sbjct: 359 MISGYVHCGMLDEAMVLFQQMPNKDMVSWNT 389
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q H+ R + +S I A ++F++M P ++ +N++I Y+ NG
Sbjct: 471 QFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNG 530
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
E + +F +++ + PDE TF +L A C H +I GF+ F S+
Sbjct: 531 HGTEAISVFREMEDNDVRPDEVTFVGVLSA-----------CSHAGLIDEGFDFFNSM 577
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 244/429 (56%), Gaps = 11/429 (2%)
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M NP+ ++N +I+ Y+ + + V+ + + + PD +T + LL AC G ++ G
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VH ++ G+ + ++ Y G ++ VFD M R V+ N M+ G+ +
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRC 120
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
D D +F M R+VVSW M++ ++G+ +AL LF EMR ELD+ +VA L
Sbjct: 121 ADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAAL 180
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRK----VVSVGNALVDFYCKCGILDTARNVFKEIP 295
CA LG + +G+WIH Y + + R V + NAL+ Y CGIL A VF ++P
Sbjct: 181 SACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMP 240
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS-----PNKATFVGVLTCCAHAGLV 350
RK+ VSW +MI A G G+ ++L++ M++ GV P++ TF+GVL C+HAG V
Sbjct: 241 RKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFV 300
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
++ ++FASM I P++EHYGCMVD+L R+G + EA LI +M + PN AIWG+LL
Sbjct: 301 DEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLG 360
Query: 411 SCRTHGHVELAEHAVKELI-NLEPWNSGNY-VLLSNIYAEGGRWDDAETLRMWMRENNVK 468
CR H + ELA +L+ L + Y VLLSNIYA G RW D T+R M E VK
Sbjct: 361 GCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVK 420
Query: 469 KSPGQSLIE 477
K PG+S I+
Sbjct: 421 KPPGRSWIQ 429
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 131/301 (43%), Gaps = 42/301 (13%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ M +V+ + +M+ + NG S + + LF ++ + D+ L AC
Sbjct: 126 ARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACAE 185
Query: 113 VGDLRVGQCVHGEIIRSGFER---FGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVI 167
+GDL++G+ +H + + R S+R+ ++ +Y SCG + + +VF +M + +
Sbjct: 186 LGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTV 245
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
MI F K+G LGK EAL LF M
Sbjct: 246 SWTSMIMAFAKQG--------------------------LGK-----EALDLFKTMLSDG 274
Query: 228 FEL-----DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
++ DE T + VL C+ G VD G I + + + + +VD + G
Sbjct: 275 VKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAG 334
Query: 283 ILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
+LD AR + + +P N W A++ G + EL ++ +++ + A ++ +L
Sbjct: 335 LLDEARGLIETMPLNPNDAIWGALLGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLL 394
Query: 342 T 342
+
Sbjct: 395 S 395
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 265/470 (56%), Gaps = 10/470 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL Q+ + + L S+ + + C L + YA IF++ P+ L+ +++ AY
Sbjct: 39 HLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 76 SLNGP--SEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
S + P + F L+ N + P+ + + +LK+ + VH + +SGF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 133 RFGSIRIGVVELY-TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ ++ ++ Y +S + ++FDEMS R+V+ M+ G+ + GD+ + LF +
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFED 218
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDI 250
M ER V SWN ++++ ++G EA+ LF M + + +E TVV VL CA+ G + +
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
+ IH++A L V V N+LVD Y KCG L+ A +VFK +K++ +WN+MI+ A
Sbjct: 279 AKGIHAFAYRRDLSSDVF-VSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 311 FNGRGELGVELYEQMIA---KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
+GR E + ++E+M+ + P+ TF+G+L C H GLV K R F MT I
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGC++D+LGR+G EA +++ +M ++ + AIWGSLL++C+ HGH++LAE AVK
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ L P N G +++N+Y E G W++A R ++ N K PG S IE
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIE 507
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 264/467 (56%), Gaps = 25/467 (5%)
Query: 13 NTRTHLTQIHAHFLRHKL--HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
N+ H+ H LR +L H N + F S CG E++ A K+F++ ++ +N
Sbjct: 97 NSLGHMILGHVFKLRLELVSHVHNASIHMFAS-CG---EMENARKVFDESPVRDLVSWNC 152
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+I Y G E+ ++++ ++++ G+ PD+ T L+ +C +GDL G+ + + +G
Sbjct: 153 LINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANG 212
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ ++++++ CG + + ++FD + R ++ + LF
Sbjct: 213 LRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSK------------------LFD 254
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M E+ VV WN MI ++ R +AL LF EM+ + DE T++ L C++LGA+D+
Sbjct: 255 DMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDV 314
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G WIH Y E L V ++G +LVD Y KCG + A VF I +N +++ A+I GLA
Sbjct: 315 GIWIHRYIEKHSLSLNV-ALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLA 373
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G + + +MI G++P++ TF+G+L+ C H G+++ R+ F+ M ++ P L
Sbjct: 374 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 433
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+HY MVD+LGR+G + EA L+ SM + +AA+WG+LL CR HG+V+L E A K+L+
Sbjct: 434 KHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLE 493
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P +SG YVLL +Y E W+DA+ R M E V+K PG S IE
Sbjct: 494 LDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 540
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 180/400 (45%), Gaps = 56/400 (14%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW---PDEYTFAPL 106
+ Y KI + NP+ +N I+ +S + ++ V + + G PD +T+ L
Sbjct: 28 LNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVL 87
Query: 107 LKACLGVGDLRV---GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
K C DLR+ G + G + + E + + ++ SCG+M++ KVFDE
Sbjct: 88 FKVC---ADLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPV 144
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD++ N +I+G+ K G+ +K A+ ++ M
Sbjct: 145 RDLVSWNCLINGYKKIGEGEK-------------------------------AIEVYKVM 173
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D+ T++ ++ CA LG ++ G+ + Y +++GL R + + NAL+D + KCG
Sbjct: 174 ESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGL-RMTIPLANALMDMFSKCGD 232
Query: 284 LDTARNVFKEIPRKNVVS-------------WNAMISGLAFNGRGELGVELYEQMIAKGV 330
+ AR +F + ++ +VS WNAMI G R + + L+++M
Sbjct: 233 IHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNT 292
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P++ T + L+ C+ G ++ + + HS+ N+ +VD+ + G + EA
Sbjct: 293 DPDEITMIHCLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTSLVDMYAKCGNISEAL 351
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ + R N+ + +++ HG A E+I+
Sbjct: 352 CVFHGIQTR-NSLTYTAIIGGLALHGDASTAISYFNEMID 390
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 259/485 (53%), Gaps = 12/485 (2%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHK---LHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
++++ L R HL+ H L K LH + +S L +A ++F++M
Sbjct: 13 RLIKSLSPAVRRAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEM 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-- 118
++ +M +A+ +G + + + +F + G++PD A L AC G G
Sbjct: 73 PEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVALAVALGACHGAGSWTARR 132
Query: 119 --GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G+ +H I+ SG E + ++ +Y CG++ +VFD+M R I N M+H +
Sbjct: 133 NPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQY 192
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ---AFELDEA 233
+ G VD LF M R VVSWN +++ +GR EAL LF +M A +
Sbjct: 193 ARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T+ +L CA G ++ G W+H+Y E + + + L+D YCKCG +D A VF++
Sbjct: 253 TMSTILGACAGAGCLETGIWVHAYIERNRMNDDGY-LDRCLIDMYCKCGSIDNALQVFEK 311
Query: 294 IPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
PRK ++ SW +I GLA +GR + +++ M G+ P+ T VGVL CAH GLV++
Sbjct: 312 APRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDE 371
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F SM I P +EHYGCM+D+LGR G ++EAY +IR+M + PN IWG+ LS+C
Sbjct: 372 GLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSAC 431
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ HG++EL + A +EL L+P + V+LS++YA+ W R M VKK+PG
Sbjct: 432 KVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPG 491
Query: 473 QSLIE 477
S IE
Sbjct: 492 CSSIE 496
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 260/438 (59%), Gaps = 20/438 (4%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLK 108
+K A F++M SV+ +N+M+ Y+ G EE ++LF +L + PDE T+ ++
Sbjct: 216 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVIS 275
Query: 109 ACLGVGDLRVGQCVHGEIIRS-----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-- 161
+C +GD C+ I+R GF ++ +++++ CG ++ K+F+++
Sbjct: 276 SCSSLGD----PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 331
Query: 162 -SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+R + N MI + + GD+ +LF +M +R VSWN MI+ ++G +A++LF
Sbjct: 332 YKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLF 391
Query: 221 HEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
EM + + DE T+V+V C LG + +G W S + + + + +SV N+L+ Y
Sbjct: 392 EEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHI-QISISVYNSLISMYS 450
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+CG + A +F+E+ +++VS+N +ISG A +G G +EL +M G+ P++ T++
Sbjct: 451 RCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIA 510
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+LT C+HAGL+ + + LF S+ P+++HY CM+D+LGR+G + EA LI+SM +
Sbjct: 511 ILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME 565
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
P+A I+GSLL++ H VEL E A +L +EP NSGNYVLLSNIYA GRW D + +R
Sbjct: 566 PHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVR 625
Query: 460 MWMRENNVKKSPGQSLIE 477
MR+ VKK+ G S +E
Sbjct: 626 DTMRKQGVKKTTGLSWLE 643
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 216/474 (45%), Gaps = 81/474 (17%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTL-NEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+HA + H LH N + ++ C L Y IF+ +P V +F M+K YS
Sbjct: 19 LRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTFMLKYYS 78
Query: 77 LNG-PSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G ++ PV LF +L++ I P+ ++ ++K+ L + +++SG++R
Sbjct: 79 QIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAH-----VLKSGYDRD 133
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF------------------ 176
+R G++ +Y G ++ K+FDEM R V N+MI G+
Sbjct: 134 HYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGD 193
Query: 177 -----------------CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
KKG++ F +M ERSVVSWN M+S + G E +RL
Sbjct: 194 QEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRL 253
Query: 220 FHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWI------------------------ 254
F++M + DE T V V+ C+ LG + + I
Sbjct: 254 FNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMH 313
Query: 255 ---------HSYAESSGLYRKVVSVG-NALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
H E G+Y+ SV NA++ Y + G L +AR++F ++P+++ VSWN+
Sbjct: 314 AKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNS 373
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVS-PNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MI+G NG ++L+E+MI+ S P++ T V V + C H G + + +
Sbjct: 374 MIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKEN 433
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
H I ++ Y ++ + R G +++A + + M+ R + + +L+S HGH
Sbjct: 434 H-IQISISVYNSLISMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEHGH 485
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG++ + A IF +M ++ +N++I ++ +G E ++L +K GI
Sbjct: 445 LISMYSRCGSMQD---AVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGI 501
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD T+ +L AC G L GQ + I + + + +++ G++++ MK
Sbjct: 502 EPDRITYIAILTACSHAGLLGEGQRLFESIKFPDVDHYACM----IDMLGRAGRLEEAMK 557
Query: 157 VFDEM 161
+ M
Sbjct: 558 LIQSM 562
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 262/486 (53%), Gaps = 35/486 (7%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A ++ L+Q ++ F++ C + + A QM+ P+V ++N++ K +
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
++L+ + + P YT++ L+KA R G+ + I + GF I+ ++
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLI 166
Query: 143 ELYTSCGQMDDGMKVFDEMSHRDVI-------------------------------VRNL 171
+ Y++ G + + KVFDEM RD I N
Sbjct: 167 DFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 226
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I+G+ G++++ LF +M + ++SW MI ++ R EA+ +F++M ++ D
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+ V+ CA LG ++IG+ +H Y +G V +G+ALVD Y KCG L+ A VF
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSALVDMYSKCGSLERALLVF 345
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+P+KN+ WN++I GLA +G + ++++ +M + V PN TFV V T C HAGLV+
Sbjct: 346 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 405
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R ++ SM +SIV N+EHYG MV + ++G + EA +LI +M PNA IWG+LL
Sbjct: 406 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 465
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-S 470
CR H ++ +AE A +L+ LEP NSG Y LL ++YAE RW D +R MRE ++K
Sbjct: 466 CRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 525
Query: 471 PGQSLI 476
PG S I
Sbjct: 526 PGTSSI 531
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 253/462 (54%), Gaps = 38/462 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS----VLLFNSMIKAY 75
Q+H H + + +S+ G + I A K+F++ NP + +NS++ Y
Sbjct: 31 QLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDE--NPQSRKLTVCYNSLLSGY 88
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+LN ++ V LF ++ LG+ + T L++ C G+L +G CVHG ++ G +
Sbjct: 89 ALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDM-- 146
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
D V N ++ + K G++D G LF EM +
Sbjct: 147 -----------------------------DSSVGNCLLTMYVKSGEIDCGRKLFDEMPRK 177
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+++WN MI+ ++G + L L+ EM + F D T+V VL CA LGA+ +G+ +
Sbjct: 178 GLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE 237
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
E G + NALV+ Y +CG L AR++F +P K+VVSW A+I G +G+G
Sbjct: 238 RKMEGFGFSSNPF-LNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQG 296
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E+ V L+++MI G+ P+ FV VL+ C+HAGL K + F M + + P EHY C
Sbjct: 297 EVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSC 356
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G + EA +LI SM +R + A+WG+LL +C+ H +VELAE A +++I LEP N
Sbjct: 357 MVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTN 416
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+G YVLLSN+Y E G + +RM MR+ +KK PG S +E
Sbjct: 417 TGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVE 458
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 248/461 (53%), Gaps = 33/461 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS- 76
L Q+HAH + S +L +++ I Y +IF + NP LF S+I++ S
Sbjct: 28 LHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRSTSK 87
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ S + + + + P YTF ++K+C + LR G+ +HG ++ +GF
Sbjct: 88 FHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVY 147
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ ++ Y CG + + KVFD+M R+RS
Sbjct: 148 VQTALMSFYGKCGVLCNARKVFDKM-------------------------------RDRS 176
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VV+WN MIS ++G EA+RLF M++ E + AT V+VL CA LGA +G W+H
Sbjct: 177 VVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHE 236
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
YA +GL VV +G +L++ Y +CG + AR VF + +NVV+W AMISG NG G
Sbjct: 237 YAVGNGLDLNVV-LGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
VEL+ +M G+ PN TFV VL+ CAHAGLV + R +F SM + +VP +EH+ C+
Sbjct: 296 QAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCL 355
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EAY+ I+ + P AIW ++L +C+ H + L + + EP N
Sbjct: 356 VDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNP 415
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+YV+LSNIYA GR D E +R M +KK G S I+
Sbjct: 416 AHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTID 456
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 155/351 (44%), Gaps = 44/351 (12%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
++ L HGR IH H L + + +S G + A K+F++MR+ S
Sbjct: 124 LVALRHGR-------IIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRS 176
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ +NSMI Y NG ++E ++LF +K +G+ P+ TF +L AC +G +G VH
Sbjct: 177 VVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHE 236
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ +G + + ++ +YT CG + +VFD M R+V+ MI G+ G +
Sbjct: 237 YAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQ 296
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+ LF HEMR + T VAVL CA
Sbjct: 297 AVELF-------------------------------HEMRRNGLLPNSITFVAVLSACAH 325
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTARNVFKEIPRKNVVS- 301
G V+ G+ + + YR V V + LVD + G+LD A N KEI + +
Sbjct: 326 AGLVNEGRRV--FESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAI 383
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
W AM+ + LG ++ E +A N A +V + A AG +++
Sbjct: 384 WTAMLGACKMHKNFGLGAQVAEHRLASE-PGNPAHYVILSNIYALAGRMDQ 433
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 260/426 (61%), Gaps = 8/426 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ ++ A F++M V +N+M+ Y+ +G ++E V+LF + + G PDE T+ +
Sbjct: 211 MRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTV 270
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRD 165
L +C +GD + + + ++ R F ++ +++++ CG ++ K+F+++ +++
Sbjct: 271 LSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKN 330
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-R 224
+ N MI + + GD+ LF +M ER+ VSWN MI+ ++G +A++LF EM
Sbjct: 331 SVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMIS 390
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + DE T+V+V C LG + +G W S + + + +S N+L+ Y +CG +
Sbjct: 391 SKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHI-KLSISGYNSLIFMYLRCGSM 449
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ AR F+E+ K++VS+N +ISGLA +G G ++L +M G+ P++ T++GVLT C
Sbjct: 450 EDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTAC 509
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAGL+E+ ++F S+ VP+++HY CM+D+LGR G + EA LI+SM + P+A I
Sbjct: 510 SHAGLLEEGWKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGI 564
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
+GSLL++ H VEL E A +L +EP NSGNYVLLSNIYA GRW D + +R MR+
Sbjct: 565 YGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRK 624
Query: 465 NNVKKS 470
VKK+
Sbjct: 625 QGVKKT 630
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 206/471 (43%), Gaps = 79/471 (16%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCG-TLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL Q+HA + H H N +A ++ C L Y + IF P+V +F M+K Y
Sbjct: 18 HLRQLHAQLVLHSQHHHNHWVALLLTQCTHLLAPSNYTSHIFRAATYPNVHVFTCMLKYY 77
Query: 76 SLNGPSEEPVKLFALLKNLGIWPD--EYT-FAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
S G + + V +L K++ + D YT F P+L G + G +H +++ G
Sbjct: 78 SQIGATTQVV--VSLFKHMQYYNDIKPYTSFYPVLIKSAG----KAGMLLHAYLLKLGHS 131
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG-------------FCKK 179
+R ++ +Y G ++ K+FDEM R N++I G FC
Sbjct: 132 HDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMM 191
Query: 180 GDVDKGL--------------------YLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
G+ +K + F EM ER V SWN M+S +SG E +RL
Sbjct: 192 GESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRL 251
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI------------------------- 254
F +M E DE T V VL C+ LG + + I
Sbjct: 252 FDDMLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAK 311
Query: 255 -------HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
E G+Y+ V+ NA++ Y + G L AR++F ++P +N VSWN+MI+
Sbjct: 312 CGNLEVAQKIFEQLGVYKNSVT-WNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIA 370
Query: 308 GLAFNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
G A NG ++L+++MI +K P++ T V V + C H G + + + H I
Sbjct: 371 GYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENH-I 429
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
++ Y ++ + R G + +A + M+ + + + +L+S HGH
Sbjct: 430 KLSISGYNSLIFMYLRCGSMEDARITFQEMATK-DLVSYNTLISGLAAHGH 479
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 282/512 (55%), Gaps = 44/512 (8%)
Query: 9 LHGRNTRTHL-TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
++ R+ H ++HAH + + + N++ ++ VS ++ +A K+F+++ +V
Sbjct: 36 MYARDRALHAGKKLHAHLVTNGFARFNVVASNLVSFYTCCGQLSHARKLFDKIPTTNVRR 95
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNL-GIWPDEYTFAP-LLKACLGVGDLRVGQCVHGE 125
+ ++I + + G + + +F+ ++ + G+ P+ P +LKAC VGD G+ +HG
Sbjct: 96 WIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRITGEKIHGF 155
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I++ FE + ++ +Y+ C +++D KVFD M+ +D + N ++ G+ ++G ++
Sbjct: 156 ILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGYVQQGAANEA 215
Query: 186 LYLFREMR----ERSVVSWNLMISSLGKSG------------------------------ 211
L L M+ + +VV+WN +IS + G
Sbjct: 216 LGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVVSWTSVISG 275
Query: 212 -----RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
R+ EA F +M F AT+ A+LP CA V +G+ IH YA +G+
Sbjct: 276 FVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYALVTGVEGD 335
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ V +ALVD Y KCG + ARN+F +P KN V+WN++I G A +G E +EL+ QM
Sbjct: 336 IY-VRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQME 394
Query: 327 AKGVSP-NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+GV+ + TF LT C+H G E + LF M +SI P LEHY CMVD+LGR+G
Sbjct: 395 KEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVDLLGRAGK 454
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EAY +I++M I P+ +WG+LL++CR H HVELAE A L+ LEP ++ N +LLS++
Sbjct: 455 LHEAYCMIKTMPIEPDLFVWGALLAACRNHRHVELAEVAAMHLMELEPESAANPLLLSSV 514
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA+ G+W E ++ +++ ++K G S IE
Sbjct: 515 YADAGKWGKFERVKKRIKKGKLRKLQGLSWIE 546
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 253/477 (53%), Gaps = 6/477 (1%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSN--LILAHFVSVCGTLNEIKYATKIFNQMR 61
+ + LL +T ++HA LR L + + + + + + R
Sbjct: 291 RAVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTR 350
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P+ + + S I A+S G + L + + G+ P +T + L AC G L G+
Sbjct: 351 DPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRG---LSPGRA 407
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKG 180
+HG + + ++ +Y G +FD+M V+ M+ + G
Sbjct: 408 LHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMG 467
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+D LF + + V WN MI + GR +EALRLF M E DE TVV VL
Sbjct: 468 ALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLS 527
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
A+LG V+ G+W+HSY ++S + V VG AL+D YCKCG L A +VF I K++V
Sbjct: 528 AVAQLGTVESGKWLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIV 587
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
WNAMI+G A +G +E++ Q +G+ P TF+G+L C+H+G+VE+ RE F SM
Sbjct: 588 VWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSM 647
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EHYGCMVD+LGR+G ++EA+ L++SM I P+A +W SLL++CR H ++ L
Sbjct: 648 EREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSL 707
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L+ NSG Y+LLSNIYA G W + +R M+ + ++K PG S IE
Sbjct: 708 GQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIE 764
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/508 (33%), Positives = 262/508 (51%), Gaps = 36/508 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK---YATKIFNQMR 61
IL + + Q HA L+ L + V+ T E K YA I N++
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIE 71
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P+ NS+I+AY+ + E + +F + ++PD+Y+F +LKAC G+
Sbjct: 72 SPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 131
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG ++S + ++ +Y G + KV D M RD + N ++ + KG
Sbjct: 132 IHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGL 191
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM------------------ 223
V++ LF EM ER+V SWN MIS +G EA +F M
Sbjct: 192 VEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHV 251
Query: 224 --------------RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
D A D T+V VL CA LG++ G+W+H Y + G+ +
Sbjct: 252 GCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGF- 310
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
V ALVD Y KCG +D A VF++ +++V +WN++I+GL+ +G G+ +E++ +M+ +G
Sbjct: 311 VATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEG 370
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
PN TF+GVL+ C H GL+++AR+LF M ++ I P +EHYGCMVD+LGR G EA
Sbjct: 371 FKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEA 430
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
+L+ + + + SLL +C+ G +E AE L+ P S YV +SN+YA
Sbjct: 431 EELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASH 490
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRWD+A +R MR VKK+PG S+IE
Sbjct: 491 GRWDEAMEVRGKMRAERVKKNPGCSMIE 518
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 262/462 (56%), Gaps = 38/462 (8%)
Query: 20 QIHAHFLRHKLHQSNL----ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
QIHA ++ + N+ L SVCG++++++ K+F++ + ++ + ++I+A+
Sbjct: 131 QIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQ---KVFDECPHRDLVSWTTLIQAF 187
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ G V+ F + +L + D T +L AC +GDL +GQ VH I
Sbjct: 188 TKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYI--------- 238
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ + +M DV V N ++ + K D++ +F EM +
Sbjct: 239 --------------------RHYIDMK-ADVFVGNALLDMYLKCDDLNSAYKVFDEMPVK 277
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+VV+WN MIS L GR EAL F M+D+ + DE T+V VL CA LG ++IG+W+H
Sbjct: 278 NVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVH 337
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+Y + + VGNAL+D Y KCG +D A VF+ + R++V S+ AMI GLA +G
Sbjct: 338 AYMRRNHILADKF-VGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEA 396
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+++ +M G+ PN+ TF+G+L C+H GLV + ++ F M+ + + P EHYGC
Sbjct: 397 NWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGC 456
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
M+D+LGR+G V+EA ++I M IRP+ G+LL +CR HG+V++ E +++L L+P
Sbjct: 457 MIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDE 516
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G Y+L++N+Y+ RW DA +R M+ ++K+PG SLIE
Sbjct: 517 EGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIE 558
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 187/370 (50%), Gaps = 36/370 (9%)
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
L N++I++ S N + P++ + +G+ PD +T +LKA + +R GQ +H
Sbjct: 77 LCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARS 136
Query: 127 IRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I++G F + ++ LY+ CG + D KVFDE HRD+
Sbjct: 137 IKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDL------------------- 177
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
VSW +I + K+G S A+ F EM D D T+V VL C+ L
Sbjct: 178 ------------VSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNL 225
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
G +++GQ +HSY + V VGNAL+D Y KC L++A VF E+P KNVV+WNAM
Sbjct: 226 GDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAM 285
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
ISGLA+ GR ++ + M KGV P++ T VGVL CA+ G++E + + A M H
Sbjct: 286 ISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNH- 344
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I+ + ++D+ + G + EA+ + SM R + + +++ HG A
Sbjct: 345 ILADKFVGNALLDMYAKCGSIDEAFRVFESMK-RRDVYSYTAMIFGLALHGEANWAFQVF 403
Query: 426 KEL--INLEP 433
E+ + +EP
Sbjct: 404 SEMFRVGIEP 413
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 258/443 (58%), Gaps = 7/443 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQM--RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
L F + CG + A K+F+++ + + + +++ + + S+E + +F ++
Sbjct: 56 LLQFYASCGCAWQ---ARKVFDEIPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRC 112
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
G+ PDE T L C +GD+ VG HG +++ G V+++Y G M +
Sbjct: 113 GVKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEA 172
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
+VF EM + V+ +++ G + V G +F EM ER+ V+W +MI+ SG
Sbjct: 173 RRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQ 232
Query: 215 EALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
E+ L EM D EL+ T+ ++L C++ G + +G+W+H+YA + + VG A
Sbjct: 233 ESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTA 292
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
+VD Y KCG + A FK++P++NVVSWNAM+SGLA +G G ++++ QM K P+
Sbjct: 293 MVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLAMHGLGRAALDIFPQMF-KEAKPD 351
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
TF VL+ C+H+GLV++ F ++ ++ I P +EHY CMVD+LGR+G + EA L+
Sbjct: 352 DVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILV 411
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
R M IRPN + GSLL SC HG ++L EH ++EL+ L+P N+ ++LLSN+YA G+ +
Sbjct: 412 REMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQN 471
Query: 454 DAETLRMWMRENNVKKSPGQSLI 476
A +LR +++ +KK PG S I
Sbjct: 472 RANSLRQVLKKRGIKKVPGMSSI 494
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 137/349 (39%), Gaps = 73/349 (20%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGF----ERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
LL++C L +G+ +H II +G E F + +++ Y SCG KVFDE+
Sbjct: 19 LLRSCARESSLDIGERLHATIITTGIAGAPETF--LHNALLQFYASCGCAWQARKVFDEI 76
Query: 162 --SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
SH+D + ++ F + D+ L +F EMR V
Sbjct: 77 PHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGV---------------------- 114
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
+ DE T+V + CARLG V +G H GL V NA++D Y
Sbjct: 115 ---------KPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGL-GGVEKACNAVMDMYA 164
Query: 280 KCGILDTARN-------------------------------VFKEIPRKNVVSWNAMISG 308
K G++ AR VF E+P +N V+W MI+G
Sbjct: 165 KSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAG 224
Query: 309 LAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
+G + L +MI + N T +LT C+ +G + R + A
Sbjct: 225 YLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKE 284
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
N+ MVD+ + G + A+ + M R N W ++LS HG
Sbjct: 285 LNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQR-NVVSWNAMLSGLAMHG 332
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 258/473 (54%), Gaps = 3/473 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIF-NQMRNPS 64
L L T L QIHA L+ L Q + F+S C + + YA +F N P
Sbjct: 15 LSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPD 74
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
L+N MI+ S + + + L+ + + YTF LLKAC + + +H
Sbjct: 75 TFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHA 134
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I + G+ ++ Y G +FD + D + N +I G+ K G++D
Sbjct: 135 HITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDM 194
Query: 185 GLYLFREMRERS-VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
L LFR+M E++ +SW MIS ++G + EAL+LFHEM++ D ++ + L C+
Sbjct: 195 ALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACS 254
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+LGA++ G+WIHSYA + V + L+D Y KCG ++ A VFK + K+V W
Sbjct: 255 QLGALEQGKWIHSYANKTRTRIDSV-LCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWT 313
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
A+ISG A++G G + + +M GV PN TF VLT C++ GLVE+ + +F ++
Sbjct: 314 ALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERD 373
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+++ P +EHYGCMVD+LGR+G + EA I+ M ++PNA IWGSLL +C+ H ++EL E
Sbjct: 374 YNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEK 433
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ LI ++ + G YV ++NI+A G +WD A R MRE V K PG S I
Sbjct: 434 IGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAI 486
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 257/441 (58%), Gaps = 5/441 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H + G+L + + + F++M +V+ +NSMI Y+ G + E LF ++ G
Sbjct: 86 LLHSYASAGSLGD---SRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGF 142
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
DE+T A LL AC G+L G+ VH ++ SG + +V++Y+ CG + +
Sbjct: 143 LGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARR 202
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
F+ M + V+ M+ K G VD F M ER+ VSWN MIS + G+ EA
Sbjct: 203 CFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEA 262
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L+ +M+ DEAT+V VL C R+G + +G+ +H Y + ++ +S+ N+L+D
Sbjct: 263 LDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDN-IHNPDISLINSLLD 321
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +DTA +F+E+ +NVVSWN +I GLA +GR + + M+ + SP+ T
Sbjct: 322 MYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMV-RNTSPDGIT 380
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FV +L+ C+H GL+E + F SM ++++ +EHY CMVD+LGR G + +A LI+ M
Sbjct: 381 FVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEM 440
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
++P+ +WG+LL +CR HG+V++ + +K+L+ LE + G +VL+SN+ E +W+D +
Sbjct: 441 PMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMK 500
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR M+E +K G S IE
Sbjct: 501 RLRKLMKERGTRKDMGVSSIE 521
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 192/447 (42%), Gaps = 70/447 (15%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F+ + +P +++N++ +AY + E ++L + G+ P+E+T ++KAC
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
VHG ++ GF GQ V V N ++H
Sbjct: 61 WDNALAVHGVALKLGF----------------VGQ---------------VFVANALLHS 89
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ G + F EM R+VVSWN MI ++G EA LF EMR Q F DE T+
Sbjct: 90 YASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTL 149
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL----------- 284
++L C++ G ++ G+ +H SG ++ +G ALVD Y KCG L
Sbjct: 150 ASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLI-LGGALVDMYSKCGDLCMARRCFEMMP 208
Query: 285 --------------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
D AR F +P +N VSWN MIS G+ ++LY+Q
Sbjct: 209 IKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQ 268
Query: 325 MIAKGVSPNKATFVGVLTCCAHAG--LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
M + G +P++AT V VL+ C G V K L+ +H+ P++ ++D+ +
Sbjct: 269 MQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIR-DNIHN--PDISLINSLLDMYAK 325
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
G V A L R M R N W ++ HG A + ++ + +V L
Sbjct: 326 CGQVDTAIRLFREMCNR-NVVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITFVAL 384
Query: 443 SNIYAEGGRWDDAETLRMWMRE-NNVK 468
+ + GG + + MR NVK
Sbjct: 385 LSSCSHGGLLETGQHYFESMRHVYNVK 411
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 285/521 (54%), Gaps = 52/521 (9%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPS 64
RL ++ L +HA + H L L L +S C + +++YA ++F+Q+ P+
Sbjct: 119 RLCEKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPN 178
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++NS+I+ YS + + V LF + G+ P+E+T +LKAC VHG
Sbjct: 179 KFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHG 238
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR----------------DVIV 168
I+ G ++ ++ +Y CG + K+FD+++ + D+IV
Sbjct: 239 LAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIV 298
Query: 169 RNL-------------------------------MIHGFCKKGDVDKGLYLFREMRERSV 197
RN MI + + G ++ +F +M ++V
Sbjct: 299 RNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNV 358
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN MIS + G+ EAL LF++MR+ DEAT+V++L C++LG + +G+ IH+Y
Sbjct: 359 VSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNY 418
Query: 258 AESS-GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
S+ G Y V++ N+L+D Y KCG + TA ++F E+P KN+VSWN +I LA +G G
Sbjct: 419 ILSNKGAYG--VTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGL 476
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++L+E+M A G P++ T G+L+ C+H+GLV+ F M ++ + +EHY CM
Sbjct: 477 EAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACM 536
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR G + EA +LI M ++P+ +WG+LL +CR HG+VE+ + +K+L+ LEP +
Sbjct: 537 VDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSG 596
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G YVL+SNIY E RW+D + +R M + +KK S IE
Sbjct: 597 GLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIE 637
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 267/504 (52%), Gaps = 45/504 (8%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ Q+HA + + L F S G +A +F+++ +P ++N++I+
Sbjct: 23 QIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLIRG 82
Query: 75 YSLNGPSEEPVKLFALLKN-------LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+ + + V ++A + + + PD+ TF +L+AC +G G VH ++
Sbjct: 83 AAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVV 142
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G E +R ++ ++ + G + +FD + D + + MI GF ++GD+
Sbjct: 143 KAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARE 202
Query: 188 LFRE-------------------------------MRERSVVSWNLMISSLGKSGRDSEA 216
LF E +R VVSWN MIS + G +A
Sbjct: 203 LFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQA 262
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV---VSVGNA 273
+ LF +M+ + D T++++L CA G +D G+ +H + SG + ++ ++GNA
Sbjct: 263 MELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL--SGRFSRIGPTTALGNA 320
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG + +A VF + KNV +WN++I GLA +G + ++ +M+ V P+
Sbjct: 321 LIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPD 380
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TFV VL C+H G+V+K E F+ M + I PN++HYGCMVD+L R G ++EA++ I
Sbjct: 381 EITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFI 440
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+M I PN IW +LL +CR HG +ELAEHA +EL+ SG++VLLSNIYA G W
Sbjct: 441 GTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWP 500
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+E +R M ++ V K G+++I+
Sbjct: 501 GSENMRKLMDDSGVNKEAGRAVID 524
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/474 (36%), Positives = 266/474 (56%), Gaps = 12/474 (2%)
Query: 12 RNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLL 67
+N R+ QI A F+ L Q + + +S + +I ++ +IF Q+ +P++
Sbjct: 13 KNCRSMSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISN 72
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I+ +S V +F + G+ PD T+ + KA + +LR+ VH I
Sbjct: 73 WNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALAVHCRIA 132
Query: 128 RSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+ G F+RF I ++ +Y SCG + KVFDEM R+ + N M+ G+ K GD+D
Sbjct: 133 KEGLWFDRF--IANSLIHMYGSCGDIGSARKVFDEMLIRNSVSWNAMLDGYAKCGDLDSA 190
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F M +R VVSW+ MI K G AL +F MR + + T+V+VL CA L
Sbjct: 191 HQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCACAHL 250
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP--RKNVVSWN 303
GA++ G+ +H Y + + R + + +L+D Y KCG ++ A VF+ +P + +V+ WN
Sbjct: 251 GALEXGRXMHQYMVDNTM-RFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWN 309
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+I GLA +G +EL+++M G+ P++ T++ + + CAH GLV +A F S+ G
Sbjct: 310 TIIGGLATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSL-GK 368
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+VP EHY CMVDVL R+G + EAYD I M + P A++ G+LL+ C H +LAE
Sbjct: 369 QGMVPKSEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAER 428
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++LI LEP + G Y+ LSN+YA WD+A +R M VKKSPG S +E
Sbjct: 429 VGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVE 482
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 265/475 (55%), Gaps = 19/475 (4%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHF-----VSVCGTLNEIKYATKIFNQMRNPSVLLF 68
T L IHA R LH L+LA VS G L+ YA ++F+Q+ P+ +
Sbjct: 7 TMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLH---YADRLFSQIHQPNTFFY 63
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-------GQC 121
N++I+ YS + + V+LF ++ + PD +TF LLK G +R+
Sbjct: 64 NTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK---GRSRMRIDLPLIVASDE 120
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG +++ GF + ++ LY + G +VF+EM DV+ + ++ + G+
Sbjct: 121 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 180
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F EM ER VVSW +M+S ++ R EAL LF EMRD DE +V+V+
Sbjct: 181 LELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISA 240
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C LG ++ G +H Y + +G + +VS+ NAL+D Y KCG +D A VF + RK++++
Sbjct: 241 CTSLGDLETGFEVHRYIDENG-FGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLIT 299
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MIS A +G E ++ M+ G+ P+ TF+ +LT H G V+ LF SM
Sbjct: 300 WNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQ 359
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + +EHYGCMVD+LGR+G + EAY LI SMS+ N +WG+LL++CR +G VE+
Sbjct: 360 RDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMG 419
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E +K+LI L+P G Y+LL +IY GR +A LR M N KK+ G S +
Sbjct: 420 ERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 261/477 (54%), Gaps = 36/477 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVS--VCGTLNEIKYATKIFNQMRN 62
++ L+ ++ L QIHAH + Q ++ F++ ++ Y+ ++F+ + N
Sbjct: 30 LISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTN 89
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P V +N+M++AYSL+ E + ++ ++ G+ D + + +K+C+ + L G +
Sbjct: 90 PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 149
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H I +G + + +++LY+ CG+ ++ K+FDE+ +D
Sbjct: 150 HARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKD----------------- 192
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF--ELDEATVVAVLP 240
VV+WN++IS L ++ R +AL LF M+ + + D+ T + +L
Sbjct: 193 --------------VVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQ 238
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA L A++ G+ IH Y + G Y ++ N+L+ Y +CG +D A VF ++ KNVV
Sbjct: 239 ACADLNALEFGERIHGYIQQHG-YNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVV 297
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW+AMISGL+ NG G +E + +M GV P TF VL+ C+H GLV++ F M
Sbjct: 298 SWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRM 357
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
I PN+ HYGC+VD+LGR+G + +AY+LI SM +RP+A +W +LL +CR HGH L
Sbjct: 358 RQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNL 417
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E V+ LI L+ +G+YVLL NIY+ G WD LR M+E + +P + IE
Sbjct: 418 GERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIE 474
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 172/471 (36%), Positives = 263/471 (55%), Gaps = 19/471 (4%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHF-----VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
L IHA R LH L+LA VS G L+ YA ++F+Q+ P+ +N++I
Sbjct: 257 LKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLH---YADRLFSQIHQPNTFFYNTLI 313
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-------GQCVHGE 125
+ YS + + V+LF ++ + PD +TF LLK G +R+ +HG
Sbjct: 314 RGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK---GRSRMRIDLPLIVASDEIHGA 370
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+++ GF + ++ LY + G +VF+EM DV+ + ++ + G+++
Sbjct: 371 VLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELA 430
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F EM ER VVSW +M+S ++ R EAL LF EMRD DE +V V+ C L
Sbjct: 431 RQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSL 490
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
G ++ G +H Y + +G + +VS+ NAL+D Y KCG +D A VF + RK++++WN+M
Sbjct: 491 GDLETGFEVHRYIDENG-FGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSM 549
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS A +G E ++ M+ G+ P+ TF+ +LT H G V+ LF SM +
Sbjct: 550 ISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYG 609
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
+ +EHYGCMVD+LGR+G + EAY LI SMS+ N +WG+LL++CR +G VE+ E +
Sbjct: 610 VEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVL 669
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
K+LI L+P G Y+LL +IY GR +A LR M N KK+ G S +
Sbjct: 670 KKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 217/511 (42%), Gaps = 83/511 (16%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHF-----VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
L IHA R LH L+LA VS G L+ YA ++F+Q+ P+ +N++I
Sbjct: 103 LKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLH---YADRLFSQIHQPNTFFYNTLI 159
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-------GQCVHGE 125
+ YS + + V+LF ++ + PD +TF LLK G +R+ +HG
Sbjct: 160 RGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK---GRSRMRIDLPLIVASDEIHGA 216
Query: 126 IIRSGFERFGSIR-------IGVVELYTSCGQMDDGMKVFDEM-------------SHRD 165
+ ++++ +++ + ++ S M + + +H
Sbjct: 217 GV--DYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHAL 274
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V+ + G + LF ++ + + +N +I KS S++++LF++MR
Sbjct: 275 VLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRR 334
Query: 226 QAFELDEATVVAVLPICARL--------------GAV----------DIGQWIHSY---- 257
+ D T +L +R+ GAV + IH Y
Sbjct: 335 NCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARG 394
Query: 258 --AESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
A + ++ ++V + LV + + G L+ AR VF E+P ++VVSW M+SG A
Sbjct: 395 VPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQ 454
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPN 369
R +EL+ +M GV P++ V V++ C G +E E+ + G +V
Sbjct: 455 AKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSL 514
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
++D+ + GC+ A+ + +M R + W S++S+C HG+ E A ++
Sbjct: 515 C---NALIDMYAKCGCMDLAWQVFNNME-RKSLITWNSMISACANHGNAEDAFRVFTLML 570
Query: 430 --NLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+ P + ++ L Y G DD L
Sbjct: 571 XSGIRP-DGVTFLALLTAYTHKGWVDDGYGL 600
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 258/463 (55%), Gaps = 9/463 (1%)
Query: 21 IHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
IHAH R LHQ ++L + ++ YA +F+QM P+ +N++I+A+S +
Sbjct: 26 IHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHS 85
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
F ++ I PDE++F LLK+ + + +HG + + GF R ++
Sbjct: 86 TTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS--RSFTMPLVHDIHGAVFKFGFCRHLHVQ 143
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHR----DVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
++ LY G KVF++ D++ + ++ K G++D +F M E
Sbjct: 144 NALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE 203
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
R VVSW +M+S+ K+ R E L LF EMR DE TV++V+ CA LG ++G+ +
Sbjct: 204 RDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMV 263
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H + E +G + +V++ N+L+D Y KCG L+ A VF RK++++WNAM+ A +G
Sbjct: 264 HKFVEENG-FGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGY 322
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
E L+E MI GV P+ T + +L AH G V++ LF SM + + P +EHYG
Sbjct: 323 AEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYG 382
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
+VD+LGRSG ++EAY+L+ SM I N IWG+LL +CR HG V + E +K+L+ L+P
Sbjct: 383 AVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPD 442
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G Y+LL +IY GR +A +R M + +K+PG S +E
Sbjct: 443 EGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/434 (35%), Positives = 252/434 (58%), Gaps = 5/434 (1%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+++ A ++ M + + +N+MI Y G EE L + +LGI DEYT+ ++
Sbjct: 222 DDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVI 281
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFG----SIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A G +G+ VH ++R+ + G S+ ++ LYT CG++ + +VFD+M
Sbjct: 282 SAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPV 341
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+D++ N ++ G +++ +FREM RS+++W +MIS L ++G E L+LF++M
Sbjct: 342 KDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQM 401
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + E + + C+ LG++D GQ +HS G + +SVGNAL+ Y +CG+
Sbjct: 402 KLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLG-HDSSLSVGNALITMYSRCGL 460
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF +P + VSWNAMI+ LA +G G ++LYE+M+ + + P++ TF+ +L+
Sbjct: 461 VEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSA 520
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLV++ R F +M + I P +HY ++D+L R+G EA ++ SM P A
Sbjct: 521 CSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAP 580
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW +LL+ C HG++EL A L+ L P G Y+ LSN+YA G+WD+ +R MR
Sbjct: 581 IWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMR 640
Query: 464 ENNVKKSPGQSLIE 477
E VKK PG S IE
Sbjct: 641 ERGVKKEPGCSWIE 654
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 211/464 (45%), Gaps = 61/464 (13%)
Query: 22 HAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFN--QMRNPSVLLFNSMIKAYSLN 78
+A +L K+ + +++ A +S IK A ++FN M + +N+MI A+S +
Sbjct: 49 YARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHS 108
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-QCVHGEIIRSGFERFGSI 137
++LF +K LG PD +TF+ +L A + D Q +H E+ + G S+
Sbjct: 109 HDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSV 168
Query: 138 RIGVVELYTSCGQ---------MDDGMKVFDEMS--HRDVIVRNLMIHGFCKKGDVDKGL 186
++ Y SC M K+FDE RD +I G+ + D+
Sbjct: 169 LNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAAR 228
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
L M + V+WN MIS G EA L M +LDE T +V+ + G
Sbjct: 229 ELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAG 288
Query: 247 AVDIGQWIHSY-----AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
+IG+ +H+Y + SG + V+SV NAL+ Y +CG L AR VF ++P K++VS
Sbjct: 289 LFNIGRQVHAYVLRTVVQPSGHF--VLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVS 346
Query: 302 WNA-------------------------------MISGLAFNGRGELGVELYEQMIAKGV 330
WNA MISGLA NG GE G++L+ QM +G+
Sbjct: 347 WNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGL 406
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDVLGRSGCVREA 389
P + G + C+ G ++ ++L + + L H +L ++ + R G V EA
Sbjct: 407 EPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHD--SSLSVGNALITMYSRCGLV-EA 463
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGH----VELAEHAVKELI 429
D + ++ W +++++ HGH ++L E +KE I
Sbjct: 464 ADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDI 507
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 150/360 (41%), Gaps = 54/360 (15%)
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ VH I+ SGF+ F I +++ Y + +FD++ D++ M+ +
Sbjct: 15 ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74
Query: 179 KGDVDKGLYLFR--EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
G++ LF M R VS+N MI++ S AL+LF +M+ F D T
Sbjct: 75 AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134
Query: 237 AVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG---------ILDT 286
+VL + + + Q +H G V SV NAL+ Y C ++
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGAL-SVPSVLNALMSCYVSCASSPLVNSCVLMAA 193
Query: 287 ARNVFKEIP--RKN-------------------------------VVSWNAMISGLAFNG 313
AR +F E P R++ V+WNAMISG G
Sbjct: 194 ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG 253
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
E +L +M + G+ ++ T+ V++ ++AGL R++ A + L ++V H+
Sbjct: 254 FYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYV--LRTVVQPSGHF 311
Query: 374 -----GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ + R G + EA + M ++ + W ++LS C +E A +E+
Sbjct: 312 VLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIEEANSIFREM 370
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+L + +H++ +SG ++ + N L+D YCK + AR +F +IP+ ++V+
Sbjct: 7 AQLSHTSFARAVHAHILTSG-FKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAA 65
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVS-PNKATFVGVLTCCAHAGLVEKARELFASMT 361
M+S + G +L +L+ A +S + ++ ++T +H+ A +LF M
Sbjct: 66 TTMLSAYSAAGNIKLAHQLFN---ATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMK 122
Query: 362 GLHSIVPN 369
L VP+
Sbjct: 123 RL-GFVPD 129
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 265/475 (55%), Gaps = 19/475 (4%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHF-----VSVCGTLNEIKYATKIFNQMRNPSVLLF 68
T L IHA R LH L+LA VS G L+ YA ++F+Q+ P+ +
Sbjct: 194 TMQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLH---YADRLFSQIHQPNTFFY 250
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-------GQC 121
N++I+ YS + + V+LF ++ + PD +TF LLK G +R+
Sbjct: 251 NTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK---GRSRMRIDLPLIVASDE 307
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG +++ GF + ++ LY + G +VF+EM DV+ + ++ + G+
Sbjct: 308 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 367
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++ +F EM ER VVSW +M+S ++ R EAL LF EMRD DE +V+V+
Sbjct: 368 LELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISA 427
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C LG ++ G +H Y + +G + +VS+ NAL+D Y KCG +D A VF + RK++++
Sbjct: 428 CTSLGDLETGFEVHRYIDENG-FGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLIT 486
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MIS A +G E ++ M+ G+ P+ TF+ +LT H G V+ LF SM
Sbjct: 487 WNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQ 546
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + +EHYGCMVD+LGR+G + EAY LI SMS+ N +WG+LL++CR +G VE+
Sbjct: 547 RDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMG 606
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E +K+LI L+P G Y+LL +IY GR +A LR M N KK+ G S +
Sbjct: 607 ERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 661
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 182/433 (42%), Gaps = 60/433 (13%)
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWP----------DEY------------------- 101
M+ Y+ S EP++LF ++++ + P D+Y
Sbjct: 124 MVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKVMHMLPTSQ 183
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI--RIGVVELYTSCGQMDDGMKVFD 159
+ A + +ACL + L++ +H R+ + +I + G + ++F
Sbjct: 184 SLASMAEACLTMQALKL---IHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFS 240
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
++ + N +I G+ K + + LF +MR V + L K GR +R+
Sbjct: 241 QIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK-GRSR--MRI 297
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY------AESSGLYRKVVSVG-- 271
+ + E+ A V L C L ++ IH Y A + ++ ++V
Sbjct: 298 DLPLIVASDEIHGA--VLKLGFCFHLFVMN--ALIHLYAARGVPAAAHQVFNEMVGADVV 353
Query: 272 --NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
+ LV + + G L+ AR VF E+P ++VVSW M+SG A R +EL+ +M G
Sbjct: 354 SWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG 413
Query: 330 VSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
V P++ V V++ C G +E E+ + G +V ++D+ + GC+
Sbjct: 414 VRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCN---ALIDMYAKCGCMD 470
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNI 445
A+ + +M R + W S++S+C HG+ E A ++ + P + ++ L
Sbjct: 471 LAWQVFNNME-RKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRP-DGVTFLALLTA 528
Query: 446 YAEGGRWDDAETL 458
Y G DD L
Sbjct: 529 YTHKGWVDDGYGL 541
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 267/504 (52%), Gaps = 45/504 (8%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ Q+HA + + L F S G +A +F+++ +P ++N++I+
Sbjct: 23 QIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLIRG 82
Query: 75 YSLNGPSEEPVKLFALLKN-------LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+ + + V ++A + + + PD+ TF +L+AC +G G VH ++
Sbjct: 83 AAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVV 142
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G E +R ++ ++ + G + +FD + D + + MI GF ++GD+
Sbjct: 143 KAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARE 202
Query: 188 LFRE-------------------------------MRERSVVSWNLMISSLGKSGRDSEA 216
LF E +R VVSWN MIS + G +A
Sbjct: 203 LFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQA 262
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV---VSVGNA 273
+ LF +M+ + D T++++L CA G +D G+ +H + SG + ++ ++GNA
Sbjct: 263 MELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFL--SGRFSRIGPTTALGNA 320
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG + +A VF + KNV +WN++I GLA +G + ++ +M+ V P+
Sbjct: 321 LIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPD 380
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ TFV VL C+H G+V+K E F+ M + I PN++HYGCMVD+L R G ++EA++ I
Sbjct: 381 EITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFI 440
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+M I PN IW +LL +CR HG +ELAEHA +EL+ SG++VLLSNIYA G W
Sbjct: 441 GTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEWP 500
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+E +R M ++ V K G+++I+
Sbjct: 501 GSENMRKLMDDSGVNKEAGRAVID 524
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 240/462 (51%), Gaps = 41/462 (8%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKACLGV 113
+ + + + + FN +++ + + + LFA ++ G +PD YT+ LK+C
Sbjct: 76 VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
L +G+ +H R G + + + +Y CG+ DD ++F+EM +RDV+ N MI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195
Query: 174 HGFCKKGDVDKGLYLFRE--------------------------------------MRER 195
GF G + + +FRE MR +
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFK 255
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
++SWN M++ + EA+ LF M+ E D T+ VLP C + A+ +G+ IH
Sbjct: 256 GLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIH 315
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ + ++ + NAL+D Y CG L AR+VF + ++VVSW ++IS +G G
Sbjct: 316 EVIKRRRMCSSML-LENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHG 374
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+E+M +G+ P+ FV +L C+HAGL++ + F SMT I P LEHY C
Sbjct: 375 REAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYAC 434
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+GC+REAYD I M I+PN +WG+LL +CR H ++++ A L+ L P
Sbjct: 435 MVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQ 494
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+G YVLLSNIYA GRW D +R M +KK PG S E
Sbjct: 495 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAE 536
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 36/298 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ +I +F++MR ++ +N+M+ Y+ N E V+LF ++ GI PD T A +
Sbjct: 239 VEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATV 298
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L +C V L +G+ +H I R + ++++Y +CG + + VFD M RD
Sbjct: 299 LPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRD- 357
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
VVSW +IS+ G+ G EA+ LF +M Q
Sbjct: 358 ------------------------------VVSWTSIISAYGRHGHGREAIDLFEKMCGQ 387
Query: 227 AFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
E D VA+L C+ G +D+G+ + +S + K+ +VD + G +
Sbjct: 388 GLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYA-CMVDLLGRAGCIR 446
Query: 286 TARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
A + +P + N W A++ + ++G+ + ++ ++P + + +L+
Sbjct: 447 EAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLR--LAPKQTGYYVLLS 502
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IH R ++ S L+ L + CG L E A +F+ M V+ + S+I AY
Sbjct: 313 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKE---ARDVFDSMGTRDVVSWTSIISAYG 369
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+G E + LF + G+ PD F +L AC G L +G+
Sbjct: 370 RHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 413
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 259/473 (54%), Gaps = 32/473 (6%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+L L N ++H + +R+ ++ +++ V + +++ A +++ R
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAID 408
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V++ ++MI Y LNG SEE +++F L I P+ T A +L C + L +GQ +HG
Sbjct: 409 VVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHG 468
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++R+ +ER + ++++Y CG++D +SH
Sbjct: 469 YVLRNAYERKCYVESALMDMYAKCGRLD--------LSH--------------------- 499
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
Y+F +M ++ V+WN MISS ++G+ EAL LF +M + + + T+ A L CA
Sbjct: 500 --YIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACAS 557
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
L A+ G+ IH G + + +AL+D Y KCG L+ A VF+ +P KN VSWN+
Sbjct: 558 LPAIYYGKEIHG-VTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNS 616
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
+IS +G + V L M +G P+ TF+ +++ CAHAGLVE+ +LF MT +
Sbjct: 617 IISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKY 676
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +EH+ CMVD+ RSG + +A I M +P+A IWG+LL +CR H +VELA+ A
Sbjct: 677 LIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIA 736
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+EL L+P NSG YVL+SNI A GRWD +R M++N + K PG S ++
Sbjct: 737 SQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVD 789
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 207/514 (40%), Gaps = 89/514 (17%)
Query: 4 KILRLLHGRNTRTHLT---QIHAH-FLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIF 57
++L +L G + HL QIHA + L N + H + + + A +F
Sbjct: 34 RLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVF 93
Query: 58 NQMRNP---SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW-------PDEYTFAPLL 107
+ + S L +N +I+ ++ G A+L + +W PD +T ++
Sbjct: 94 SALPRAAAASSLPWNWLIRGFTAAGQHH-----LAVLFYVKMWSHPAAPSPDAHTLPYVV 148
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
K+C +G + +G+ VH G + +V++Y G + + FD + RD +
Sbjct: 149 KSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCV 208
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+ WN+M+ K+G A+RLF MR
Sbjct: 209 L-------------------------------WNVMMDGCIKAGDVDGAVRLFRNMRASG 237
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E + AT+ L +CA + G +HS A GL +V +V N L+ Y KC LD A
Sbjct: 238 CEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV-AVANTLLAMYAKCQCLDDA 296
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F+ +P+ ++V+WN MISG NG L+ M G P+ T V +L
Sbjct: 297 WRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDL 356
Query: 348 GLVEKARE---------------LFASMTGLH------SIVPNLEHYGCMVDVLGRS--- 383
+++ +E L +++ ++ + NL +DV+ S
Sbjct: 357 NGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMI 416
Query: 384 ------GCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
G EA + R + I+PNA S+L C + + L + + + +
Sbjct: 417 SGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQ-IHGYVLRNAY 475
Query: 435 NSGNYV--LLSNIYAEGGRWDDAETLRMWMRENN 466
YV L ++YA+ GR D + + + M + +
Sbjct: 476 ERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKD 509
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 163/381 (42%), Gaps = 44/381 (11%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A F+ + +L+N M+ G + V+LF ++ G P+ T A L C
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
DL G +H ++ G E ++ ++ +Y C +DD ++F+ M D++ N M
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGM 314
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G C V GL++ EA LF++M+ D
Sbjct: 315 ISG-C----VQNGLFV--------------------------EAFGLFYDMQRSGARPDS 343
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V++LP L + G+ +H Y + + V V +ALVD Y KC + A+N++
Sbjct: 344 ITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLV-SALVDIYFKCRDVRMAQNLYD 402
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+VV + MISG NG E ++++ ++ + + PN T VL CA +
Sbjct: 403 AARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPL 462
Query: 353 ARELFASMTGLHSIVPNLEHYGCMV-----DVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
+++ ++ N C V D+ + G + ++ + MS + + W S
Sbjct: 463 GQQIHG------YVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS-QKDEVTWNS 515
Query: 408 LLSSCRTHGHVELAEHAVKEL 428
++SS +G + A +++
Sbjct: 516 MISSFSQNGKPQEALDLFRQM 536
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 272/478 (56%), Gaps = 3/478 (0%)
Query: 3 RKILRLLHGRNTRTHLTQ-IHA-HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
R I+ + T + T+ IH F R + QS L V + + + A K+F++M
Sbjct: 133 RTIVFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEM 192
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ V+ + ++I Y+ G +E ++F ++ +WP+E T A +G L +G
Sbjct: 193 ADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLG 252
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VH I+ SG ++ +V+++ CG + +VFD M +DV M+ + K
Sbjct: 253 RTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKC 312
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GD++ LF+E+ R+VVSW+ M+++ + EA+R+F++M E +AT+V+VL
Sbjct: 313 GDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVL 372
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+L ++D+G W++ S ++ NA +D + KCG + A +F + KNV
Sbjct: 373 SACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNV 432
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSWN MI +G+ E + L+++ G+ P++AT++GVL+ C+H GLV + R F
Sbjct: 433 VSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKE 492
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M ++ I P EHY CM+D+LG+ G ++EA+++ RSM + + A WG+LL++CR HG+VE
Sbjct: 493 MKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVE 552
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + A +L L+P +SG YVL+S IYA +W + LR MR+ VKK+PG S IE
Sbjct: 553 IGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIE 610
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 171/417 (41%), Gaps = 77/417 (18%)
Query: 50 IKYATKIFNQ-MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+ +A + Q P+ + +M++ + G + LF + + D T +K
Sbjct: 81 LAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVK 140
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFG-SIRIG--VVELYTSCGQMDDGMKVFDEMSHRD 165
A + +H + GF G S+ G +V +YTS + D K+FDEM+ RD
Sbjct: 141 A--AATSSSPTEAIHCVAFKRGF--IGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRD 196
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-R 224
V+ +I G+ + G D EA R+F M
Sbjct: 197 VVSWTTLIDGYARGGLPD-------------------------------EAWRVFCRMVV 225
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF------- 277
++ +E T+VA ++G + +G+ +H SG R V++ NALVD
Sbjct: 226 AESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESG-GRMSVNLENALVDMFGKCGCV 284
Query: 278 ------------------------YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
Y KCG L+ A +FKEIP +NVVSW+ M++ +
Sbjct: 285 AAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHAN 344
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI--VPNLE 371
+ + ++ MIA GV P AT V VL+ CA ++ L+ + H + PNL
Sbjct: 345 MPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLS 404
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ +D+ + G V A L +M + N W +++ + HG E A H +E
Sbjct: 405 N--AFIDMFAKCGDVGAASRLFSNMEDK-NVVSWNTMIMAHGLHGQPEEALHLFQEF 458
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
M+ ++G+ + AL LF + +D T+V + A + + IH A G
Sbjct: 103 MMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIV--FAVKAAATSSSPTEAIHCVAFKRG 160
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ V GNALV Y +L AR +F E+ ++VVSW +I G A G + ++
Sbjct: 161 FIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVF 220
Query: 323 EQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT---GLHSIVPNLEHYGCMVD 378
+M +A+ V PN+ T V + GL+ R + + G S+ NLE+ +VD
Sbjct: 221 CRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSV--NLEN--ALVD 276
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ G+ GCV A ++ M I+ + W S++S+ G +E A KE+ N
Sbjct: 277 MFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFKEIPN 327
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 263/463 (56%), Gaps = 8/463 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++ ++ + N + + + L+ ++ A K+F++M + +N MI Y
Sbjct: 218 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 277
Query: 80 PSEEPVKLFALLKNLGIW-PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSI 137
E+ + F ++ G PDE T L AC + +L +G +H + + GF I
Sbjct: 278 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTT--RI 335
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++ +FDEMS ++VI MI G+ GD+ + LF + R V
Sbjct: 336 DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDV 395
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V W MI+ + +A+ LF EM+ Q + D+ TVV +L CA+LGA++ G+WIH Y
Sbjct: 396 VLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGY 455
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + + VV VG AL++ Y KCG +D + +F E+ K+ SW ++I GLA NG+
Sbjct: 456 LDENRITMDVV-VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSE 514
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ L+ +M G P+ TF+GVL+ C+H GLVE+ R F SM +H I P +EHYGC++
Sbjct: 515 ALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVI 574
Query: 378 DVLGRSGCVREAYDLIRSMSIRPN---AAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
D+LGR+G + EA +LI+ + I ++G+LLS+CR H +V++ E K+L N+E
Sbjct: 575 DLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESC 634
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+S + LL+NIYA RW+DA+ +R M+E VKK PG SLIE
Sbjct: 635 DSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIE 677
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 212/460 (46%), Gaps = 67/460 (14%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ 59
++ + L + L QI + R L + ++ C +L ++YA KIFN
Sbjct: 97 KKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNY 156
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+++PS+ ++N M+K Y+ G + + LF L+ G+WPD +T+ +LKA + D+R G
Sbjct: 157 VQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQG 216
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ V G I+++G + + ++++Y +++ K+FDEM+ RD + N+MI G+ +
Sbjct: 217 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRC 276
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ + FREM++ G + DEATVV+ L
Sbjct: 277 RRFEDAINTFREMQQE---------------GNEKP---------------DEATVVSTL 306
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C L +++G IH+Y + + NAL+D Y KCG L+ ARN+F E+ KNV
Sbjct: 307 SACTALKNLELGDEIHNYVRKELGF--TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNV 364
Query: 300 VSWNAMISGL--------------------------AFNGRGEL-----GVELYEQMIAK 328
+ W +MISG NG + V L+ +M +
Sbjct: 365 ICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQ 424
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+ P+K T V +LT CA G +E+ + + + + I ++ ++++ + GCV +
Sbjct: 425 KIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDVVVGTALIEMYSKCGCVDK 483
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ ++ + + A+ W S++ +G A E+
Sbjct: 484 SLEIFYELEDKDTAS-WTSIICGLAMNGKTSEALRLFSEM 522
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 267/478 (55%), Gaps = 7/478 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+ L L+ + + + QIH H + L N + V L + +A K+F M
Sbjct: 133 QTFLHLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMP 192
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P V FN MI Y+ G E ++L+ + + GI PDEYT LL C + D+R+G+
Sbjct: 193 QPDVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEPDEYTLLGLLVCCGHLSDIRLGKG 252
Query: 122 VHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG I R G + +R ++++Y C + + FD + +D+ N M+ GF +
Sbjct: 253 VHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRL 312
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR-LFHEMRD-QAFELDEATVVA 237
GD++ +F +M +R +VSWN ++ K G D A+R LF+EM + + D T+V+
Sbjct: 313 GDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVS 372
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
++ A G + G+W+H L + +AL+D YCKCG+++ A VFK K
Sbjct: 373 LISGAANNGELSHGRWVHGLMIRLQLEGDAF-LSSALIDMYCKCGLIERAFMVFKTATEK 431
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+V W +MI+G AF+G G+ ++L+++M + V+PNK T + VLT C+H+GLVE+ +F
Sbjct: 432 DVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLHVF 491
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS-MSIRPNAAIWGSLLSSCRTHG 416
M P EHYG +VD+L R+G + EA D++++ M +RP+ ++WGS+LS+CR
Sbjct: 492 YHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACREGE 551
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+E AE A+ EL+ LEP G YVLLSNIYA GRW ++ R M VKK+ G S
Sbjct: 552 DIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYS 609
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 198/461 (42%), Gaps = 76/461 (16%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIF-NQMRN 62
L LL ++R Q+ A +R L ++ F S + A +F + N
Sbjct: 37 LVLLENCSSRNQFKQVLAQIMRFNLIGVTFPMSRLIFFSAITYPENLDLAKLLFLDFTPN 96
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V ++N+MI A S E L++ + + PD TF L+KA + +++ +
Sbjct: 97 PNVFVYNTMISAVS--SSKNECFGLYSSMIRYRVSPDRQTFLHLMKASSFLSEVKQ---I 151
Query: 123 HGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H II SG G+ + +V+ Y G + KVF M DV N+MI G+ K+G
Sbjct: 152 HCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQG- 210
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
GL EAL L+++M E DE T++ +L
Sbjct: 211 --FGL----------------------------EALELYYKMVSDGIEPDEYTLLGLLVC 240
Query: 242 CARLGAVDIGQWIHSYAESSG-LYRKVVSVGNALVDFYCKC------------------- 281
C L + +G+ +H + E G +Y + + NAL+D Y KC
Sbjct: 241 CGHLSDIRLGKGVHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMR 300
Query: 282 ------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE--LYEQMIA 327
G ++ A+ VF ++P++++VSWN+++ + G + V YE +I
Sbjct: 301 SWNTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIV 360
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ V P++ T V +++ A+ G + R + M L + + ++D+ + G +
Sbjct: 361 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLMIRLQ-LEGDAFLSSALIDMYCKCGLIE 419
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
A+ + ++ + + +W S+++ HG+ + A K +
Sbjct: 420 RAFMVFKT-ATEKDVPLWTSMITGFAFHGYGQQALQLFKRM 459
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 250/455 (54%), Gaps = 16/455 (3%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMR-----NPSVLLFNSMIKAYSLNGPSEEPVKL 87
S L+ AH + + A ++ +MR P+V+ +N ++ + +G + + V
Sbjct: 89 SALVAAH-----AARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVA 143
Query: 88 FALLKNLGIW-PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYT 146
A + G+ PD + L A VG + VGQ +HG +++G + ++++Y
Sbjct: 144 LATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYG 203
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNL 202
CGQ + ++VFDE SH DV N +I G + V + L LF+E +R +VVSW
Sbjct: 204 KCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTS 263
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
+++ ++G+D EA+ F EM+ Q E + T+ VLP A + A+ G+ H +A G
Sbjct: 264 IVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKG 323
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
V V +ALVD Y KCG + AR +F + +NVVSWNAMI G A G V ++
Sbjct: 324 FLHDVY-VSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMF 382
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
M+ P+ TF +L C AGL E+ R F M + + P +EHY CMV +LGR
Sbjct: 383 HSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGR 442
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLL 442
+G + EAYDLI M P+A IWGSLL SCR HG+V+LAE A ++L +LEP N+GNYVLL
Sbjct: 443 AGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLL 502
Query: 443 SNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SNIYA WD +R M++ +KK G S IE
Sbjct: 503 SNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIE 537
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
L H +R +F D + C L + + +H+ AE SGL R V ++L+ Y
Sbjct: 7 LHHFLRHVSFPPDPHLLPTAFKSCPTL---PLARALHAVAEVSGLARDPF-VASSLLHAY 62
Query: 279 CKCGILDTARNVFKEIPR--KNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKA 335
+ G AR +F +PR + VV W+A+++ A G E L E+M GV PN
Sbjct: 63 LRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVI 122
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
T+ G+++ +G A A+M G + P+ C + +G G V
Sbjct: 123 TWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLV 173
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 100/265 (37%), Gaps = 76/265 (28%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+ L+HGR+ H + FL H ++ S+ ++ + CG +K A IF+ M + +
Sbjct: 306 VAALMHGRSA--HCFALRKGFL-HDVYVSSALVDMYAK-CG---RVKDARIIFDTMVSRN 358
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V+ +N+MI Y++ G + V +F + PD TF LL AC
Sbjct: 359 VVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAAC-------------- 404
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
T G ++G F EM H + V M H C
Sbjct: 405 ---------------------TQAGLTEEGRHYFKEM-HNEYGVSPRMEHYAC------- 435
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
M++ LG++G+ EA L + D FE D ++L C
Sbjct: 436 ------------------MVTLLGRAGKLDEAYDL---ISDMPFEPDAYIWGSLLGSCRV 474
Query: 245 LGAVDIGQ-----WIHSYAESSGLY 264
G VD+ + H E++G Y
Sbjct: 475 HGNVDLAEVAAEKLFHLEPENAGNY 499
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 276/477 (57%), Gaps = 5/477 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQM 60
++ L LL T + + Q+H+H + +S+ + +I +A K+F +
Sbjct: 11 QRCLSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSL 70
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ + ++N++I+ + + + L+ + G P+ YTF+ +L+AC + VG
Sbjct: 71 PHRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRAC--TDNSPVGL 128
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H ++I+ G+E + + G++ LY + ++ K+FD + RDVI +I+G+ K G
Sbjct: 129 ASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSG 188
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
V+ LF +M ER+ VSW+ MI+ G EAL LF++++ + A +V L
Sbjct: 189 HVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALT 248
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C+ LG++D G+WIH+Y + +G V +G ALVD Y KCG ++ A +VF+++P K+
Sbjct: 249 ACSYLGSLDHGRWIHAYVDRNGTELDRV-LGTALVDMYAKCGCIEIACSVFEKMPDKDAF 307
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++ ++ISGLA +G+ ++L+ +M ++ V PN+ TF+ VL+ C+ GLV++ +F M
Sbjct: 308 AFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCM 367
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ I P ++HYGCMVD+LGR+G + EA L+R M + P++ + G+LL+SCR HG VEL
Sbjct: 368 SVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVEL 427
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ V+ L+ + G +VLLSN+YA +WD +R M VKK PG S IE
Sbjct: 428 GKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSIE 484
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 251/462 (54%), Gaps = 50/462 (10%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L QI A+ LR+ + + ++ + + I YA K+F+ + P+V L+N +I+AYS
Sbjct: 4 LKQIQAYTLRNGIEHTKQLIVSLLQI----PSIPYAHKLFDFIPKPTVFLYNKLIQAYSS 59
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+GP + L+ + G P+E++F L AC + + G+ +H ++SGF
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y G + K FDEM+ RDV N MI G+ + GD++ L LFR M R+V
Sbjct: 120 LTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNV 179
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHS 256
SW MIS ++G+ ++AL +F M ++ +E T+ +VLP CA LGA+++G+ I
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRG 315
YA +G Y K + V NAL++ Y +CG +D A VF+EI R+N+ SWN+MI GLA +GR
Sbjct: 240 YARGNG-YFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRC 298
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ +EL+ +M+ +G +P+ TFVGVL C H G+V + + F SM SI P LEHYGC
Sbjct: 299 DEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGC 358
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LG P A L LEP N
Sbjct: 359 MVDLLG------------------PGA-------------------------LFELEPSN 375
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYV+LSNIYA GRWD LR M+ + K+ G S IE
Sbjct: 376 PGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIE 417
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 272/478 (56%), Gaps = 3/478 (0%)
Query: 3 RKILRLLHGRNTRTHLTQ-IHA-HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
R I+ + T + T+ IH F R + QS L V + + + A K+F++M
Sbjct: 133 RTIVFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEM 192
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ V+ + ++I Y+ G +E ++F ++ +WP+E T A +G L +G
Sbjct: 193 ADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLG 252
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VH I+ SG ++ +V+++ CG + +VFD M +DV M+ + K
Sbjct: 253 RTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKC 312
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GD++ LF+E+ R+VVSW+ M+++ + EA+R+F++M E +AT+V+VL
Sbjct: 313 GDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVL 372
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+L ++D+G W++ S ++ NA +D + KCG + A +F + KNV
Sbjct: 373 SACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNV 432
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSWN MI +G+ E + L+++ G+ P++AT++GVL+ C+H GLV + R F
Sbjct: 433 VSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKE 492
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M ++ I P EHY CM+D+LG+ G ++EA+++ RSM + + A WG+LL++CR HG+VE
Sbjct: 493 MKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVE 552
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + A +L L+P +SG YVL+S IYA +W + LR MR+ VKK+PG S IE
Sbjct: 553 IGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIE 610
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 171/417 (41%), Gaps = 77/417 (18%)
Query: 50 IKYATKIFNQ-MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+ +A + Q P+ + +M++ + G + LF + + D T +K
Sbjct: 81 LAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVK 140
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFG-SIRIG--VVELYTSCGQMDDGMKVFDEMSHRD 165
A + +H + GF G S+ G +V +YTS + D K+FDEM+ RD
Sbjct: 141 A--AATSSSPTEAIHCVAFKRGF--IGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRD 196
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-R 224
V+ +I G+ + G D EA R+F M
Sbjct: 197 VVSWTTLIDGYARGGLPD-------------------------------EAWRVFCRMVV 225
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF------- 277
++ +E T+VA ++G + +G+ +H SG R V++ NALVD
Sbjct: 226 AESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESG-GRMSVNLENALVDMFGKCGCV 284
Query: 278 ------------------------YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
Y KCG L+ A +FKEIP +NVVSW+ M++ +
Sbjct: 285 AAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHAN 344
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI--VPNLE 371
+ + ++ MIA GV P AT V VL+ CA ++ L+ + H + PNL
Sbjct: 345 MPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLS 404
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ +D+ + G V A L +M + N W +++ + HG E A H +E
Sbjct: 405 N--AFIDMFAKCGDVGAASRLFSNMEDK-NVVSWNTMIMAHGLHGQPEEALHLFQEF 458
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
M+ ++G+ + AL LF + +D T+V + A + + IH A G
Sbjct: 103 MMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIV--FAVKAAATSSSPTEAIHCVAFKRG 160
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ V GNALV Y +L AR +F E+ ++VVSW +I G A G + ++
Sbjct: 161 FIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVF 220
Query: 323 EQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT---GLHSIVPNLEHYGCMVD 378
+M +A+ V PN+ T V + GL+ R + + G S+ NLE+ +VD
Sbjct: 221 CRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSV--NLEN--ALVD 276
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ G+ GCV A ++ M I+ + W S++S+ G +E A KE+ N
Sbjct: 277 MFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFKEIPN 327
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 257/459 (55%), Gaps = 36/459 (7%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
HA R L + + V++ L + A ++F+ + V+ +N+M+KAY G +
Sbjct: 139 HALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMA 198
Query: 82 EEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS-IRI 139
+ ++F + + G + P+E T A +L AC GDL +G+ + E +RS GS +
Sbjct: 199 ADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLE-EWVRSAEIEVGSLVGS 257
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V +Y CG+M + +VFD ++H+DV V+
Sbjct: 258 ALVGMYEKCGEMTEARRVFDGIAHKDV-------------------------------VA 286
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MI+ ++G EA+ LFH MR + D+ T+V VL CA +GA+++G + +YA
Sbjct: 287 WNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYAS 346
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
GLY V VG ALVD Y KCG LD A VF ++P KN +WNA+I GLAFNGRG +
Sbjct: 347 HRGLYGNVY-VGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGHEAI 405
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E M +G+ P+ TF+GVL+ C HAGL++ R F S+T I+P +EHY CMVD
Sbjct: 406 RQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQIIPKIEHYSCMVD 465
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L R+G + EA+D + + + +A + G+LL++CR +VE++E + ++ LEP NS N
Sbjct: 466 LLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVINRIMQLEPSNSWN 525
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+ S IYA R DD+ +R MRE V K PG S +E
Sbjct: 526 YVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVE 564
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 159/349 (45%), Gaps = 38/349 (10%)
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+ +N ++ ++ P ++LF + + PD YT LL A + +
Sbjct: 80 PTAFSYNVTLRFFASTRP-RTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSA 138
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H + R G + +V +Y++ G +VFD + RDV+ N M+ + + G
Sbjct: 139 HALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMA 198
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+FR+M + V+ N E TV VL C
Sbjct: 199 ADVARMFRDMIDEGAVAPN------------------------------EVTVAVVLAAC 228
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
G + +G+W+ + S+ + + VG+ALV Y KCG + AR VF I K+VV+W
Sbjct: 229 RDAGDLVLGRWLEEWVRSAEIEVGSL-VGSALVGMYEKCGEMTEARRVFDGIAHKDVVAW 287
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASM 360
NAMI+G A NG + + L+ M +G SP+K T VGVL+ CA G +E EL +AS
Sbjct: 288 NAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELDAYASH 347
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
GL+ N+ +VD+ + G + +A + + + N A W +L+
Sbjct: 348 RGLYG---NVYVGTALVDMYSKCGDLDKAVQVFGKLPCK-NEATWNALI 392
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 266/479 (55%), Gaps = 12/479 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSV-----CGTLNEIKYATKIFNQMRN 62
LL + HL QIHAH L+ L QS +A + V C + YA IF ++
Sbjct: 13 LLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQ 72
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC-LGVGDL-RVGQ 120
++ ++NSMI+ Y L+ ++ + + L + G ++YTF PL+KAC L +L R+G
Sbjct: 73 RNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKRIGY 132
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +I G+E + +VE Y S + +FD+ S +DV+V +M+ G+ K G
Sbjct: 133 LVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDVVVWTVMVDGYGKVG 191
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D++ LF EM ER+V+SW+ M+++ + E L LF +M+ + +++ + +VL
Sbjct: 192 DIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIASVLT 251
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+ G W+HSYA+ GL + + ALVD Y KCG +++A VF+ I K+
Sbjct: 252 ACAHLGAITQGLWMHSYAKRYGLDSNPI-LATALVDMYSKCGYIESALEVFEGISNKDAG 310
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+WNAMISG A G +EL+++MIA G +ATFV +L C HA +VE+ E F M
Sbjct: 311 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 370
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGH 417
++ + P EHY C+VD++ R+G V +A + +A +WG++LS+CR + +
Sbjct: 371 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 430
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+E+ + +L L + G VL NI++E GR A+ +R E KK PG S+I
Sbjct: 431 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVI 489
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 274/481 (56%), Gaps = 6/481 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFN 58
I +L LL + L Q+HA + L Q + ++ + N +I Y+ ++F+
Sbjct: 13 ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ +P++ +N++I+ YS + + + +F + LG+ PD T+ L+KA + +
Sbjct: 73 QLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQET 132
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G VH II++G E I+ ++ +Y +CG KVFD + ++V+ N M+ G+ K
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAK 192
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G++ F M E+ V SW+ +I K+G SEA+ +F +M+ + +E T+V+V
Sbjct: 193 CGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSV 252
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK- 297
CA +GA++ G+ I+ Y +GL +V + +LVD Y KCG ++ A +F+ + +
Sbjct: 253 SCACAHMGALEKGRMIYKYIVDNGLPLTLV-LQTSLVDMYAKCGAIEEALLIFRRVSKSQ 311
Query: 298 -NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+V+ WNA+I GLA +G E ++L+++M G+ P++ T++ +L CAH GLV++A
Sbjct: 312 TDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFF 371
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F S++ + P EHY CMVDVL R+G + AY I M P A++ G+LLS C H
Sbjct: 372 FESLSKC-GMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINHR 430
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++ LAE ++LI LEP + G Y+ LSN+YA RWDDA ++R M VKKSPG S +
Sbjct: 431 NLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSFV 490
Query: 477 E 477
E
Sbjct: 491 E 491
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 245/433 (56%), Gaps = 10/433 (2%)
Query: 52 YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK-----NLGIWPDEYTFAPL 106
YA +F+ + P L ++++ L P P ++F+ L+ L P + F+ L
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELPFLP--FAFSTL 147
Query: 107 LKACLGVGDLRVGQCVHG-EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
K+ L H ++ GF+R + ++ Y +CG + KVFDEM +D
Sbjct: 148 AKSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEMVEKD 207
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
VI ++ + + GD+ +F + +V+W M++ ++ +AL +F M +
Sbjct: 208 VISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMAE 267
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+DE ++ + CA+LGA+ W+ AE +G VV VG+ LVD Y KCG++D
Sbjct: 268 LGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVV-VGSGLVDMYAKCGLID 326
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCC 344
A VF + KNV ++++MI+GLA +GR + L+++M+ + V PN TF+GVLT C
Sbjct: 327 EASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTAC 386
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAG+V + R FA M + I+P+ +HY CMVD+LGR+G V EA DL+RSMS+ P+ +
Sbjct: 387 SHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGV 446
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL +CR HG E+A+ + L LEP + GNYVLLSNI A G+W++ +R+ MR+
Sbjct: 447 WGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRK 506
Query: 465 NNVKKSPGQSLIE 477
+KK P SL E
Sbjct: 507 QRLKKDPAVSLFE 519
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/481 (35%), Positives = 262/481 (54%), Gaps = 8/481 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQM 60
++ L LLH L Q HA L+ LH SN +L+ ++ C + +A K+F +
Sbjct: 6 KRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHI 65
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++P++ +FN+MIKA L G + +F+ + GI PD YT +LKA + ++ +G+
Sbjct: 66 QHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGE 125
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H I+ G + ++ +Y S M +VFDEM + +MI+G+ G
Sbjct: 126 SIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYGYANMG 185
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DVD LF + W MIS ++ E L +F M+ E DEA +V +L
Sbjct: 186 DVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILS 245
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA +GA+D G WIH Y GL + V L+D Y KCG LD A+ +F E+ +++ V
Sbjct: 246 ACAHMGALDTGIWIHRYLGRLGL-PLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNV 304
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
WNAMISG+A +G GE ++L+ +M G+ P+ TF+ V C+++G+V++ ++ M
Sbjct: 305 CWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRM 364
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI----RSMSIRPNAAIWGSLLSSCRTHG 416
+ +H I P EHYGC++D+L R G EA +I ++ S A W + LS+C HG
Sbjct: 365 STVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHG 424
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ AE A + L LE +SG YVLLSN+YA G+ +DA+ +R M+ V+K PG S I
Sbjct: 425 QTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSI 483
Query: 477 E 477
+
Sbjct: 484 K 484
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 261/462 (56%), Gaps = 6/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++ ++ + N + + + L+ ++ A K+F++M + +N MI Y
Sbjct: 264 KVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCR 323
Query: 80 PSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E+ + F ++ G PDE T L AC + +L +G +H +R I
Sbjct: 324 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHN-YVRKELGFTTRID 382
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y CG ++ +FDEMS ++VI MI G+ GD+ + LF + R VV
Sbjct: 383 NALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVV 442
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
W MI+ + +A+ LF EM+ Q + D+ TVV +L CA+LGA++ G+WIH Y
Sbjct: 443 LWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYL 502
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ + + VV VG AL++ Y KCG +D + +F E+ K+ SW ++I GLA NG+
Sbjct: 503 DENRITMDVV-VGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEA 561
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ L+ +M G P+ TF+GVL+ C+H GLVE+ R F SM +H I P +EHYGC++D
Sbjct: 562 LRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVID 621
Query: 379 VLGRSGCVREAYDLIRSMSIRPN---AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+LGR+G + EA +LI+ + I ++G+LLS+CR H +V++ E K+L N+E +
Sbjct: 622 LLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCD 681
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
S + LL+NIYA RW+DA+ +R M+E VKK PG SLIE
Sbjct: 682 SSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIE 723
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 211/452 (46%), Gaps = 69/452 (15%)
Query: 12 RNTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLL 67
RN ++ L QI + R L + ++ C +L ++YA KIFN +++PS+ +
Sbjct: 151 RNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFV 210
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N M+K Y+ G + + LF L+ G+WPD +T+ +LKA + D+R G+ V G I+
Sbjct: 211 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 270
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G + + ++++Y +++ K+FDEM+ RD + N+MI G+ + + +
Sbjct: 271 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 330
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
FREM++ G + DEATVV+ L C L
Sbjct: 331 TFREMQQE---------------GNEKP---------------DEATVVSTLSACTALKN 360
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+++G IH+Y + + NAL+D Y KCG L+ ARN+F E+ KNV+ W +MIS
Sbjct: 361 LELGDEIHNYVRKELGF--TTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMIS 418
Query: 308 GL--------------------------AFNGRGEL-----GVELYEQMIAKGVSPNKAT 336
G NG + V L+ +M + V P+K T
Sbjct: 419 GYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFT 478
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
V +LT CA G +E+ + + + + I ++ ++++ + GCV ++ ++ +
Sbjct: 479 VVTLLTGCAQLGALEQGKWIHGYLDE-NRITMDVVVGTALIEMYSKCGCVDKSLEIFYEL 537
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ A+ W S++ +G A E+
Sbjct: 538 EDKDTAS-WTSIICGLAMNGKTSEALRLFSEM 568
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 248/432 (57%), Gaps = 40/432 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPL 106
+ YA ++F ++ NP L+N+MI+ G + +P K F K + G D +T++ L
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGL---GRTRQPEKAFEFYKRMQVKGEVLDNFTYSFL 57
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+K C +G +G+ +H +++ G E V
Sbjct: 58 VKVCGQLGSDLLGKQIHCNVLKHGLEE-------------------------------HV 86
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
VRN ++H + D++ +LF EM + +V+WN +I GR EA+ LF M
Sbjct: 87 FVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQS 146
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D+AT V L CA LG +DIG+ +HS + +GL VVSV N+L+D Y KCG+++
Sbjct: 147 GLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGL-GNVVSVSNSLIDMYAKCGVVEA 205
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCA 345
A +F ++ +N+VSWN MI GLA +G G+ +EL+ +M+ K +PN+ TF+GVL C+
Sbjct: 206 AYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACS 265
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H G+VE+ R F M ++I P ++HYG MVD+LGR+G V EAY LI+SM I N+ +W
Sbjct: 266 HGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVW 325
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
+LL++CR HG++ELAE ++L+ LEP +S +YVLL+N+YA G+W+ +R M
Sbjct: 326 RTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIR 385
Query: 466 NVKK-SPGQSLI 476
V+K PG S I
Sbjct: 386 GVQKPKPGNSYI 397
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 155/343 (45%), Gaps = 34/343 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH + L+H L + + V + G +I+ AT +F +M ++ +N++I G
Sbjct: 72 QIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCG 131
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E ++LF + G+ PD+ TF L AC +G+L +G+ VH I +G S+
Sbjct: 132 RYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVSN 191
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG ++ ++F++M R+++ N MI G G D+ L LF +M E + +
Sbjct: 192 SLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLAT 251
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
N E T + VL C+ G V+ G+
Sbjct: 252 PN------------------------------EVTFLGVLCACSHGGMVEEGRRYFDIMR 281
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
+ + ++VD + G+++ A + K +P N + W +++ +G EL
Sbjct: 282 RDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELA 341
Query: 319 VELYEQMIAKGVSPNKAT-FVGVLTCCAHAGLVEKARELFASM 360
++ +Q++ + P+ ++ +V + A AG K + SM
Sbjct: 342 EQVRQQLLE--LEPDHSSDYVLLANMYASAGQWNKVVRVRKSM 382
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/477 (32%), Positives = 273/477 (57%), Gaps = 9/477 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L R + + ++H+ ++ +S+L+ + V G I A ++F++M N
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ + S++ A++ + P + ++L + G+ PD + FA +++AC +G LR+G+
Sbjct: 70 VSWASILTAHN---KALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQ 126
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH + S F ++ ++++YT CGQ DD VFD + ++ + MI G+ + G
Sbjct: 127 VHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARAVFDSILFKNSVSWTSMISGYARSGR 186
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLP 240
+ + LF + R++ SW +IS L +SG + LF+EMR + ++ D + +V+
Sbjct: 187 KCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVG 246
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA L +++G+ IH + G + + + NALVD Y KC + A+++F +PRK+V+
Sbjct: 247 GCANLALLELGKQIHGLVIALG-FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW ++I G A +G+ E + LY++M+ + PN+ TFVG+L C+HAGLV + RELF SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
T +SI P+L+HY C++D+L RSG + EA +L+ + +P+ W SLLS+C H ++E+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+++L+P + Y+LLSN+YA W +R M V+K PG S I+
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 267/472 (56%), Gaps = 43/472 (9%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSN------LILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
++++ L QIHA +RH + N LI A VS+ ++ +A +IFNQ++ P++
Sbjct: 46 SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFA-LVSLSAPMS---FAAQIFNQIQAPNIF 101
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+N+MI+ ++ + V+LF+ + I PD +TF L KA + D+ +G+ +H
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++R+GF+ S+R V+N ++H + G +
Sbjct: 162 VVRNGFD---SLRF----------------------------VQNSLVHMYSVLGSLXSA 190
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F M R V+WN +I+ +G +EAL L+ EM + E D T+V++L C L
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+ +G+ +H Y GL + NAL+D Y KCG A+ VF E+ ++VVSW ++
Sbjct: 251 GALALGERVHMYMVKVGLVQNQ-HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSL 309
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I GLA NG G ++L+ ++ +G+ P++ TFVGVL C+H G++++ F M +
Sbjct: 310 IVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYG 369
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I+P +EH+GCMVD+L R+G V +AYD IR+M + PNA IW +LL +C HGH+EL E A
Sbjct: 370 ILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVAR 429
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+ LE +SG++VLLSN+YA RW D + +R M VKK+PG SL+E
Sbjct: 430 AEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVE 481
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 258/465 (55%), Gaps = 9/465 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L + HA ++ L Q A VS + +F++ + L++S++ A S
Sbjct: 22 LRRAHARLIKEGLAQHPPAPALLVSAYAKSRLLPDTRLLFDETPRRDLHLYSSLLAAVS- 80
Query: 78 NGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
SE P + LL+ + + PD + A + A + L +G+ +HG + S +
Sbjct: 81 --HSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSS 138
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
++ ++++Y CG DD KVFD + ++ ++ +I G+ G D+ L LFR M
Sbjct: 139 DDVVKSSLIDMYCKCGVPDDARKVFDSIVAKNSVMWTALISGYVLNGRSDEALELFRSMP 198
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGAVDIGQ 252
R++ +W +IS +SG A++LF +MR +D+A V++ + A L A +G+
Sbjct: 199 GRTLFAWTALISGFVRSGESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGR 258
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+HS G ++ VGNA+VD Y KC + +AR VF+EI ++++SW M+ G A +
Sbjct: 259 QLHSLTMRLGFSSSMI-VGNAVVDMYSKCSDIHSAREVFEEITGRDIISWTTMLVGEAQH 317
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
GR E LY++M+ GV PN+ TFVG++ C+HAGLV+K R+LF SM G + I P L+H
Sbjct: 318 GRAEEAFSLYDRMVLAGVKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQH 377
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y C +D+L RSG + EA +LI +M P+ A W SLLS+C+ + + E++ L+ L
Sbjct: 378 YTCYLDLLSRSGHLAEAEELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELR 437
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P YVLLSN+YA G+WD +T+R M + ++K PG S IE
Sbjct: 438 PKYPSTYVLLSNVYAVNGKWDSVDTVRKLMADMEIRKEPGYSWIE 482
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/433 (37%), Positives = 246/433 (56%), Gaps = 5/433 (1%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A ++ Q +V+ + S+I YS G + V F + + G+ PDE
Sbjct: 183 GLLDE---ARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVI 239
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH- 163
L AC + +L G+ +H + + + + + ++++Y CG + VFD +
Sbjct: 240 GALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRG 299
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ N++I G+CK G VD LF +M R V+++N MI+ SGR +AL+LF ++
Sbjct: 300 QKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQL 359
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
R D TVV++L CA LGA+ G+ +H+ E + V V ALVD Y KCG
Sbjct: 360 RRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLV-TALVDMYMKCGR 418
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+D A VF + ++V +W+AMI+GLAFNG G +E + QM G P T++ VLT
Sbjct: 419 VDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTA 478
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+ L+ + R+ F M LH + P +EHYGCM+D+L RSG + EA L+++M ++PNA
Sbjct: 479 CSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAV 538
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW S+LS+CR H +++LA HA + L+ L P YV L NIY + +W +A+ +RM M
Sbjct: 539 IWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLME 598
Query: 464 ENNVKKSPGQSLI 476
E VKK+ G S I
Sbjct: 599 EQGVKKTAGYSSI 611
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 192/400 (48%), Gaps = 35/400 (8%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKA-YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++Y +F+++ +P+ L ++ ++A + ++ PV + ++ G+ +TF + +
Sbjct: 51 LRYVLSLFDRLPHPTTFLHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFR 110
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVI 167
C + + +H +R+ I ++ +Y S G DD + FDE+ +D +
Sbjct: 111 CCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAV 170
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
V +I G + G +D+ L + ER+VVSW +I+ ++GR ++A+ F+ M
Sbjct: 171 VWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDG 230
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIH--------------------SYAESSGLYRKV 267
E DE V+ L C++L ++ G+ +H YA+ + +
Sbjct: 231 VEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQ 290
Query: 268 V---SVG--------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+VG N ++D YCK G +D AR++F ++ ++V+++N+MI+G +GR
Sbjct: 291 AVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLR 350
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++L+ Q+ G+ + T V +LT CA G + + R L AS+ + ++ +
Sbjct: 351 DALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQ-RIVEEDVYLVTAL 409
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
VD+ + G V EA + M R + W ++++ +G
Sbjct: 410 VDMYMKCGRVDEATAVFHRMGER-DVHTWSAMIAGLAFNG 448
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG ++E AT +F++M V +++MI + NG + ++ F +K G P T+
Sbjct: 416 CGRVDE---ATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTY 472
Query: 104 APLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+L AC L G+ E+ + E +G + ++L G +D+ M +
Sbjct: 473 IAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCM----IDLLARSGLLDEAMHLV 528
Query: 159 DEM 161
M
Sbjct: 529 QTM 531
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 252/433 (58%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A +F ++ +++N+MI Y +G + +LF + + + DE+TF +L
Sbjct: 249 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 308
Query: 109 ACLGVGDLRVGQCVHGEIIR--SGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
AC G G+ VHG+IIR F ++ + +V LY+ G++ ++FD M+ +
Sbjct: 309 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 368
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ G +DK + +F+ M ++ +SW +M+S G +AL+LF++MR
Sbjct: 369 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T + C LGA+ G+ +H++ G + S GNAL+ Y KCG +
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCG-FEASNSAGNALLTMYAKCGAV 487
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ AR VF +P + VSWNAMIS L +G G +EL++QM+A+G+ P++ +F+ +LT C
Sbjct: 488 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 547
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
HAGLV++ F SM I P +HY ++D+LGRSG + EA DLI++M P +I
Sbjct: 548 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 607
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W ++LS CRT+G +E +A +L + P + G Y+LLSN Y+ GRW DA +R MR+
Sbjct: 608 WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 667
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 668 RGVKKEPGCSWIE 680
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 222/531 (41%), Gaps = 80/531 (15%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-- 63
LRL+H L A F R + V+ ++ A F+ +
Sbjct: 67 LRLIHLYTLSPDLATPAALF-RSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARR 125
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC- 121
+L N+M+ A++ + V +F ALL + + PD+Y+F L+ A + +L C
Sbjct: 126 DTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCT 185
Query: 122 -VHGEIIRSGFERFGSIRIGVVELYTSCGQMD---DGMKVFDEMSHRDVIVRNLMIHGFC 177
+H +++SG S+ ++ LY C + D KV DEM +D + M+ G+
Sbjct: 186 QLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYV 245
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
++GDV+ +F E+ + V WN MIS +SG ++A LF M + LDE T +
Sbjct: 246 RRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 305
Query: 238 VLPICARLGAVDIGQWIHSYA---ESSGLYRKVVSVGNALVDFYCK-------------- 280
VL CA G G+ +H + + + + V NALV Y K
Sbjct: 306 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 365
Query: 281 -----------------CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
G LD A VFK +P KN +SW M+SG G E ++L+
Sbjct: 366 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 425
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS---------------- 365
QM A+ V P T+ G + C G ++ R+L A + G +
Sbjct: 426 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 485
Query: 366 ----------IVPNLE--HYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLS 410
++PNL+ + M+ LG+ G REA +L M I P+ + ++L+
Sbjct: 486 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 545
Query: 411 SCRTHGHVELAEH---AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+C G V+ H ++K + P +Y L ++ GR +A L
Sbjct: 546 ACNHAGLVDEGFHYFESMKRDFGISP-GEDHYARLIDLLGRSGRIGEARDL 595
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNL---ILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L HGR Q+HAH ++ SN L + CG +N+ + +F M N
Sbjct: 452 LKHGR-------QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL---VFLVMPNLD 501
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ +N+MI A +G E ++LF + GI PD +F +L A C H
Sbjct: 502 SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA-----------CNHA 550
Query: 125 EIIRSGFERFGSIR--IGV----------VELYTSCGQMDDGMKVFDEMSHRDVI-VRNL 171
++ GF F S++ G+ ++L G++ + + M +
Sbjct: 551 GLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEA 610
Query: 172 MIHGFCKKGDVDKGLY----LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
++ G GD++ G Y LFR + + ++ L+ ++ +GR +A R+ MRD+
Sbjct: 611 ILSGCRTNGDMEFGAYAADQLFRMIPQHD-GTYILLSNTYSAAGRWVDAARVRKLMRDR 668
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 252/474 (53%), Gaps = 3/474 (0%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
++ LL G T ++HA +R + + + + + +P
Sbjct: 37 RVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDP 96
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ + + S I A+S G + L + + G+ P +T + L AC G L +G+ +H
Sbjct: 97 TTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---LALGRALH 153
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+ + ++ +Y G D +FDEM V+ M+ + K G +D
Sbjct: 154 AYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALD 213
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF M + + WN MI + GR +EALRLF M + DE ++ L A
Sbjct: 214 DARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVA 273
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+LG + G+W+HSY ++S + VG AL+D YCKCG L+ A +VF I K++V WN
Sbjct: 274 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 333
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI+G A +G +E++ Q+ ++G+ P TF+G+L C+H+GLV++ + F SM
Sbjct: 334 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 393
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
++IVP +EHYGCMVD+LGR+G + EA+ L++SM+I P+ +W SLL++CR H ++ L +
Sbjct: 394 YAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQ 453
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ NSG Y+LLSNIYA G W++ +R M+ + ++K PG S IE
Sbjct: 454 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 507
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 252/474 (53%), Gaps = 3/474 (0%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
++ LL G T ++HA +R + + + + + +P
Sbjct: 36 RVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLTPDP 95
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ + + S I A+S G + L + + G+ P +T + L AC G L +G+ +H
Sbjct: 96 TTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTLSSSLPACHG---LALGRALH 152
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+ + ++ +Y G D +FDEM V+ M+ + K G +D
Sbjct: 153 AYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPDPHVVPVTAMLTCYAKMGALD 212
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF M + + WN MI + GR +EALRLF M + DE ++ L A
Sbjct: 213 DARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVA 272
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+LG + G+W+HSY ++S + VG AL+D YCKCG L+ A +VF I K++V WN
Sbjct: 273 QLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWN 332
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI+G A +G +E++ Q+ ++G+ P TF+G+L C+H+GLV++ + F SM
Sbjct: 333 AMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEE 392
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
++IVP +EHYGCMVD+LGR+G + EA+ L++SM+I P+ +W SLL++CR H ++ L +
Sbjct: 393 YAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQ 452
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ NSG Y+LLSNIYA G W++ +R M+ + ++K PG S IE
Sbjct: 453 IADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIE 506
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 252/433 (58%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A +F ++ +++N+MI Y +G + +LF + + + DE+TF +L
Sbjct: 247 DVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLS 306
Query: 109 ACLGVGDLRVGQCVHGEIIR--SGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
AC G G+ VHG+IIR F ++ + +V LY+ G++ ++FD M+ +
Sbjct: 307 ACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK 366
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ G +DK + +F+ M ++ +SW +M+S G +AL+LF++MR
Sbjct: 367 DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 426
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T + C LGA+ G+ +H++ G + S GNAL+ Y KCG +
Sbjct: 427 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCG-FEASNSAGNALLTMYAKCGAV 485
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ AR VF +P + VSWNAMIS L +G G +EL++QM+A+G+ P++ +F+ +LT C
Sbjct: 486 NDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTAC 545
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
HAGLV++ F SM I P +HY ++D+LGRSG + EA DLI++M P +I
Sbjct: 546 NHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI 605
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W ++LS CRT+G +E +A +L + P + G Y+LLSN Y+ GRW DA +R MR+
Sbjct: 606 WEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 665
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 666 RGVKKEPGCSWIE 678
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/470 (26%), Positives = 204/470 (43%), Gaps = 77/470 (16%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC-- 121
+L N+M+ A++ + V +F ALL + + PD+Y+F L+ A + +L C
Sbjct: 125 TVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQ 184
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMD---DGMKVFDEMSHRDVIVRNLMIHGFCK 178
+H +++SG S+ ++ LY C + D KV DEM +D + M+ G+ +
Sbjct: 185 LHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVR 244
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+GDV+ +F E+ + V WN MIS +SG ++A LF M + LDE T +V
Sbjct: 245 RGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSV 304
Query: 239 LPICARLGAVDIGQWIHSYA---ESSGLYRKVVSVGNALVDFYCK--------------- 280
L CA G G+ +H + + + + V NALV Y K
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364
Query: 281 ----------------CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
G LD A VFK +P KN +SW M+SG G E ++L+ Q
Sbjct: 365 LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQ 424
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS----------------- 365
M A+ V P T+ G + C G ++ R+L A + G +
Sbjct: 425 MRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGA 484
Query: 366 ---------IVPNLE--HYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSS 411
++PNL+ + M+ LG+ G REA +L M I P+ + ++L++
Sbjct: 485 VNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA 544
Query: 412 CRTHGHVELAEH---AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
C G V+ H ++K + P +Y L ++ GR +A L
Sbjct: 545 CNHAGLVDEGFHYFESMKRDFGISP-GEDHYARLIDLLGRSGRIGEARDL 593
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 53/270 (19%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNL---ILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L HGR Q+HAH ++ SN L + CG +N+ + +F M N
Sbjct: 450 LKHGR-------QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL---VFLVMPNLD 499
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ +N+MI A +G E ++LF + GI PD +F +L A C H
Sbjct: 500 SVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTA-----------CNHA 548
Query: 125 EIIRSGFERFGSIR--IGV----------VELYTSCGQMDDGMKVFDEMSHRDVI-VRNL 171
++ GF F S++ G+ ++L G++ + + M +
Sbjct: 549 GLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEA 608
Query: 172 MIHGFCKKGDVDKGLY----LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
++ G GD++ G Y LFR + + ++ L+ ++ +GR +A R+ MRD+
Sbjct: 609 ILSGCRTNGDMEFGAYAADQLFRMIPQHD-GTYILLSNTYSAAGRWVDAARVRKLMRDRG 667
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSY 257
+ + P C+ +++G IH +
Sbjct: 668 VKKE--------PGCSW---IEVGSKIHVF 686
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 267/472 (56%), Gaps = 43/472 (9%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSN------LILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
++++ L QIHA +RH + N LI A VS+ ++ +A +IFNQ++ P++
Sbjct: 46 SSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFA-LVSLSAPMS---FAAQIFNQIQAPNIF 101
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+N+MI+ ++ + V+LF+ + I PD +TF L KA + D+ +G+ +H
Sbjct: 102 TWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSV 161
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++R+GF+ S+R V+N ++H + G +
Sbjct: 162 VVRNGFD---SLRF----------------------------VQNSLVHMYSVFGFAESA 190
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F M R V+WN +I+ +G +EAL L+ EM + E D T+V++L C L
Sbjct: 191 YQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVEL 250
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+ +G+ +H Y GL + NAL+D Y KCG A+ VF E+ ++VVSW ++
Sbjct: 251 GALALGERVHMYMVKVGLVQNQ-HASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSL 309
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I GLA NG G ++L+ ++ +G+ P++ TFVGVL C+H G++++ F M +
Sbjct: 310 IVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYG 369
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I+P +EH+GCMVD+L R+G V +AYD IR+M + PNA IW +LL +C HGH+EL E A
Sbjct: 370 ILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVAR 429
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+ LE +SG++VLLSN+YA RW D + +R M VKK+PG SL+E
Sbjct: 430 AEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVE 481
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/443 (36%), Positives = 249/443 (56%), Gaps = 4/443 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
++ VS+ G ++ A +F++ + + +MI + N E + +F+ ++ +
Sbjct: 203 VSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRR-EM 261
Query: 97 WP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
WP DE ++ AC +R G+ HG +IR+G +I+ ++ +Y+ C +
Sbjct: 262 WPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAAR 321
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD D N MI G+ K G V+ + LF M ++ VSW+ MIS ++ + S
Sbjct: 322 RLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSH 381
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL +F MR Q DE T+V+V+ C L A++ G+ +H Y + Y +V +G +L+
Sbjct: 382 ALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLV-LGTSLI 440
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS-PNK 334
D Y KCG L+ A +VF + K WNA+I GLA NG +E++ +M A + PN+
Sbjct: 441 DMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNE 500
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
TF GVL+ C HAGLVE+ R F M + IVPN+ HYGCMVD+LGR+G V+EA DLI
Sbjct: 501 ITFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIE 560
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
SM + P+ WG+LL +C HG E+ E ++L+NL+P + G +LSNIYA+ G W
Sbjct: 561 SMPMSPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQS 620
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
LR M++ +V K G S++E
Sbjct: 621 VNDLRDSMKQRHVPKVSGYSVVE 643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 220/546 (40%), Gaps = 110/546 (20%)
Query: 17 HLTQIHAHF-----LRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNS 70
HL QIH F L S L+L F S L I ++ ++ +R P+ N+
Sbjct: 19 HLLQIHGQFIASGLLADAFAASRLLL--FTSATRLLPFPIHHSFRLLRLVRCPNAFSCNT 76
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
++KA L G P L +L PD YT L AC D+ G+ V IR G
Sbjct: 77 LLKAALLAG---MPHLCLPLYTSLPASPDTYTHPILAAACAARRDVSEGRQVQSHAIRHG 133
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F +R ++ +Y+ CG + D +VFD D + N ++ + GDVD+ + +F
Sbjct: 134 FGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFA 193
Query: 191 EMRERS-------------------------------VVSWNLMISSLGKSGRDSEALRL 219
M +R+ + +W MIS ++ +EAL +
Sbjct: 194 RMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHM 253
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---------------- 263
F MR + + +DEA +V+V+ CA+ + G+ H +GL
Sbjct: 254 FSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSC 313
Query: 264 ------YRKVVSVGNALVDF--------YCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
R++ G+ L F Y K G ++ A +F +P K+ VSW+ MISG
Sbjct: 314 CLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGC 373
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE-------------- 355
N + + +++ M A+GV P++ T V V++ C + +EK +
Sbjct: 374 VQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITL 433
Query: 356 -LFASMTGLHSIVPNLEH---------------YGCMVDVLGRSGCVREAYDLIRSMSIR 399
L S+ ++ LE + ++ L +G V ++ ++ M
Sbjct: 434 VLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEAS 493
Query: 400 ----PNAAIWGSLLSSCRTHGHVELAEHAVKEL---INLEPWNSGNYVLLSNIYAEGGRW 452
PN + +LS+CR G VE H K + + P N +Y + ++ G
Sbjct: 494 STAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVP-NIRHYGCMVDLLGRAGYV 552
Query: 453 DDAETL 458
+AE L
Sbjct: 553 KEAEDL 558
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 249/461 (54%), Gaps = 33/461 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q HAH + H+S +L +++ I Y ++F + +P LFNS+IKA S
Sbjct: 26 LQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSK 85
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G S + V + + I P YTF ++KAC + L +G VH + SG+ +
Sbjct: 86 FGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFV 145
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ ++ Y KVFDEM +RS+
Sbjct: 146 QAALIAFYAKSCTPRVARKVFDEMP-------------------------------QRSI 174
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+WN MIS ++G +EA+ +F++MR+ E D AT V+VL C++LG++D G W+H
Sbjct: 175 VAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDC 234
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
SG+ VV + +LV+ + +CG + AR VF + NVV W AMISG +G G
Sbjct: 235 IVGSGITMNVV-LATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVE 293
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+E++ +M A+GV PN TFV VL+ CAHAGL+++ R +FASM + +VP +EH+ CMV
Sbjct: 294 AMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMV 353
Query: 378 DVLGRSGCVREAYDLIRSM-SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
D+ GR G + EAY ++ + S A+W ++L +C+ H + +L + LIN EP N
Sbjct: 354 DMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENP 413
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+YVLLSN+YA GR D E++R M + +KK G S I+
Sbjct: 414 GHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTID 454
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 238/434 (54%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A K+F+++ V+ +N++I Y+ G +E ++LF + + PDE T +L A
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + +G+ VH I GF I +++LY CG+
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE------------------- 285
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+ LF + + V+SWN +I EAL LF EM
Sbjct: 286 ------------VETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN------ALVDFYCKCGI 283
+E T++++LP CA LGA+DIG+WIH Y + +++ V N +L+D Y KCG
Sbjct: 334 PNEVTMLSILPACAHLGAIDIGRWIHVYID-----KRLKGVSNPSSLRTSLIDMYAKCGD 388
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ VF + +++ SWNAMI G A +GR +++ +M G+ P+ TFVG+L+
Sbjct: 389 IEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSA 448
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SMT + I P LEHYGCM+D+LG SG +EA ++I SM + P+
Sbjct: 449 CSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGV 508
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP NSG+YVLLSNIYA GRW++ R +
Sbjct: 509 IWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLN 568
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 569 DKGMKKVPGCSSIE 582
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 233/461 (50%), Gaps = 39/461 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILA---HFVSVCGTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ F + + + YA +F+ ++
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ + L+ + +LG+ P+ YTF LLKAC R GQ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G + + ++ +Y G+ +D KVFD+ SHRDV+ +I G+ G +
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+F E+ + VVSWN +IS ++G EAL LF EM + DE+T+V VL C
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ ++++G+ +HS+ + G + + + NAL+D Y KCG ++TA +F+ + K+V+SW
Sbjct: 246 AQSASIELGRQVHSWIDDHG-FGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR-------- 354
N +I G + + L+++M+ G SPN+ T + +L CAH G ++ R
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364
Query: 355 ---------ELFASMTGLHSIVPNLEHYGCMVDVL------------------GRSGCVR 387
L S+ +++ ++E + D + GR+
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ + +R I P+ + LLS+C G ++L H + +
Sbjct: 425 DIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 275/507 (54%), Gaps = 37/507 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMR 61
++ +L + L QIHA ++ L ++ ++ C G + YA+ +F++++
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD--EYTFAPLLKACLGVGDLRVG 119
+P+ +F ++IK +S E + L+A + + + E++ +LKAC + G
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VHG+++++ + +V +Y G+++ +VFD M +RDV+ N MI G+ K
Sbjct: 129 RQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKA 188
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGR--------------------------- 212
G+++ LF EM ER +VS N MI GK GR
Sbjct: 189 GEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYV 248
Query: 213 ----DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+AL LF EM D +V+VL A LG V+ G+W+H+Y + +
Sbjct: 249 QNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSG 308
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
+G+AL+D Y KCG ++ A +VF+ I R+N+ WN+MISGLA +G ++++ +M
Sbjct: 309 FIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMER 368
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+ PN+ TF+G+L+ C+H GLVE+ + F SM + IVP ++HYGCM+D+ GR+G +
Sbjct: 369 MDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLE 428
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
+A +I++M + W ++LS+ HGH+E+ + A I L P +S +YVLLSNIYA
Sbjct: 429 DALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYA 488
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQS 474
+ GRWDD +R+ MR+ VKK G S
Sbjct: 489 KAGRWDDVAKIRLMMRQRGVKKIAGCS 515
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 278/539 (51%), Gaps = 68/539 (12%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL---NEIKYATKIFNQM 60
+IL L + T HL Q+HA + H H S L+ S+ + YA IF+ +
Sbjct: 98 QILSLFNPCKTLRHLKQVHAQIITH--HNSPFQLSALASLSALSPFPTFLAYAKTIFHHL 155
Query: 61 RNPSVLLFNS------------------------------MIKAYSLNGPSEEPVKLFAL 90
+NP L+NS M + + +E V F L
Sbjct: 156 QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGL 215
Query: 91 LKNL-----GIWPDEYTFAPLLKACLGVGDLRVGQ-----CVHGEII------------- 127
L + G D Y + L+ DL + C +++
Sbjct: 216 LVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHV 275
Query: 128 -----RSGFERFGSIRI----GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
R F+R + ++ Y G++D+ ++FDEM R+++ N M+ GF K
Sbjct: 276 EMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVK 335
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G+V+ LF EM R VVSWN M++ + G+ +EAL LF +MR + EATVV++
Sbjct: 336 CGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL 395
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA LGA+D G +H+Y + + + VG ALVD Y KCG + A VF + K+
Sbjct: 396 LSACAHLGALDKGLHLHTYINDNRIEVNSI-VGTALVDMYAKCGKISLATQVFNAMESKD 454
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V++WN +I+G+A +G + +L+++M GV PN TFV +L+ C+HAG+V++ ++L
Sbjct: 455 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 514
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M+ + I P +EHYGC++D+L R+G + EA +LI +M + PN + G+LL CR HG+
Sbjct: 515 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 574
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EL E K LINL+P +SG Y+LLSNIYA +WDDA +R M+ N + K PG S+IE
Sbjct: 575 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE 633
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 253/475 (53%), Gaps = 33/475 (6%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
K L LL + H+ QI A + LH + I HF++ C +L + A +F P
Sbjct: 13 KFLNLLTNCCSPCHIHQIQAQLIVQNLHSNTTIAHHFITACQSLGLLDSALLLFTHHSKP 72
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V + NS+I+A+S N P ++ + + I P+ +TF LLK+ L GQC+H
Sbjct: 73 HVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKGLSEGQCIH 132
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+++ GQ DD + V+N +++ + GD+
Sbjct: 133 THVVK-------------------LGQFDD------------IYVQNSLLNVYASCGDMG 161
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ +F EM R VVSW ++I+ + R +AL F +M+ + T+V L CA
Sbjct: 162 LCMRVFDEMPHRDVVSWTVLITGYRSAERYDDALIAFEQMQYAGVVPNHVTMVNALSACA 221
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
GA+++G WIH + SG V+ +G +L+D Y KCG ++ VF+ + KNV +WN
Sbjct: 222 DFGALEMGVWIHEFIRRSGWEFDVI-LGTSLIDMYGKCGRIEEGLVVFRSMKEKNVFTWN 280
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS-MTG 362
++I GLA G V + +M +G+ ++ T + VL C+H+G+V+ R++F S M G
Sbjct: 281 SLIKGLALARSGAEAVWWFYRMEQEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNG 340
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ P ++HY C++D+L R+G ++EA +++ M PN +WG+ L+ CR HG +EL+E
Sbjct: 341 KYEFFPGVKHYACVIDLLARAGILQEAMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSE 400
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++L+ LEP N YVLLSNIYAE GRW D E +R M+E + K G S IE
Sbjct: 401 FAARKLVELEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGGLTKDLGCSSIE 455
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 217/333 (65%), Gaps = 1/333 (0%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y + G++ + KVFD MS RD++ N MIHG+ +GDV +F R+R SW+ MI
Sbjct: 126 YVARGEVAEARKVFDGMSGRDLVSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMI 185
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S+ K EAL L+ EMR D ++V+VL C+ +GA+ IG +H + ES+ +
Sbjct: 186 SAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVE 245
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ +G ALVD Y KCG ++ + VF +P K+V++W++MI GLA +G G + L+ +
Sbjct: 246 VDM-KLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSE 304
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
MI++G+ PN+ TF+GVL C H GLV ++ F+SM+ +H +VP +EHYGCMVD+LGR+G
Sbjct: 305 MISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAG 364
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
V EA +LIRSM+ +P+ IW +LL +CR H +VE+AE A+ +L L+P G+YVLLSN
Sbjct: 365 HVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSN 424
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA+ W+ +R +R N+++ PG+S IE
Sbjct: 425 IYAQANSWEGVAEMRKTIRRENIQRVPGRSSIE 457
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 58/328 (17%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
RK+ + GR+ + T IH + +R ++ A +IF+ R+
Sbjct: 136 RKVFDGMSGRDLVSWNTMIHGYAVR--------------------GDVGMAREIFDGTRD 175
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
++SMI AY+ S+E ++L+ ++ G+ PD + +L AC +G L +G V
Sbjct: 176 RDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEV 235
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H + + E + +V++Y CG +++ +KVF M +DV+ + MI G G
Sbjct: 236 HRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHG-- 293
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
LG +AL LF EM Q + +E T + VL C
Sbjct: 294 ------------------------LGH-----DALSLFSEMISQGLQPNEITFIGVLIAC 324
Query: 243 ARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK-NVV 300
+G V+ G ++ S ++ G+ ++ G +VD + G ++ A + + + K + +
Sbjct: 325 THVGLVNDGKKYFSSMSDVHGVVPRMEHYG-CMVDLLGRAGHVEEAMELIRSMTFKPDPI 383
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAK 328
W ++ R VE+ E+ +AK
Sbjct: 384 IWRTLLGAC----RIHKNVEIAEEAMAK 407
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 247/460 (53%), Gaps = 32/460 (6%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L + HA + L + IL F + + N I A+ +F + NP L+N MI+ ++
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+G ++L++ + G+ PD++ F LK+C G+ DL+ G+ +H ++ G +
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y CG D++ +F +M R +
Sbjct: 856 DAALVDMYAKCG-------------------------------DIEAARLVFDKMAVRDL 884
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSW MIS +G +SE L F MR + ++++VL C LGA+ G+W HSY
Sbjct: 885 VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+G ++ V A++D Y KCG LD AR +F E K++V W+AMI+ +G G
Sbjct: 945 VIQTGFEFDIL-VATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 1003
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
++L++QM+ GV P+ TF VL+ C+H+GL+E+ + F MT I L +Y CMV
Sbjct: 1004 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMV 1063
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + EA DLI +M + P+A+IWGSLL +CR H +++LAE L +L+P ++G
Sbjct: 1064 DLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAG 1123
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+VLLSNIYA RW++ E +R M K G SL+E
Sbjct: 1124 YHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVE 1163
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 225/428 (52%), Gaps = 33/428 (7%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
K A +F++M V+ +++MI Y+ N + E + LF + P+ T L+AC
Sbjct: 258 KIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQAC 317
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+L G+ +H + GFE S+ ++++Y C
Sbjct: 318 AVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCS--------------------- 356
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
C VD LF+ + ++ VVSW ++S ++G +++ +F M +
Sbjct: 357 ------CPDEAVD----LFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQP 406
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D VV +L + LG +H Y SG + V VG +L++ Y KCG L A +
Sbjct: 407 DAVAVVKILAASSELGIFQQALCLHGYVVRSG-FNSNVFVGASLIELYSKCGSLGDAVKL 465
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGL 349
FK + ++VV W++MI+ +GRG +E+++QM+ V PN TF+ +L+ C+HAGL
Sbjct: 466 FKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGL 525
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
VE+ ++F M + + P+ EH+G MVD+LGR G + +A D+I M I +WG+LL
Sbjct: 526 VEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALL 585
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+CR H ++E+ E A K L L+P ++G Y+LLSNIYA G+WD+ LR ++E +KK
Sbjct: 586 GACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKK 645
Query: 470 SPGQSLIE 477
GQS++E
Sbjct: 646 MFGQSMVE 653
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 189/414 (45%), Gaps = 42/414 (10%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG- 95
L S CG + E A K+F + + P +L+ SM+ Y N EE + LF+ + +
Sbjct: 145 LVELYSKCGQMGE---ALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDC 201
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ D T ++ AC + +++ G CVHG +IR F+ + ++ LY G
Sbjct: 202 VVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAA 261
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+F +M +DVI + MI + ++ L L
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANEALNL--------------------------- 294
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
FHEM ++ FE + TVV+ L CA ++ G+ IH A G + SV AL+
Sbjct: 295 ----FHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG-FELDFSVSTALI 349
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y KC D A ++F+ +P+K+VVSW A++SG A NG + ++ M++ G+ P+
Sbjct: 350 DMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAV 409
Query: 336 TFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
V +L + G+ ++A L + +G +S N+ ++++ + G + +A L
Sbjct: 410 AVVKILAASSELGIFQQALCLHGYVVRSGFNS---NVFVGASLIELYSKCGSLGDAVKLF 466
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
+ M +R + IW S++++ HG A +++ N LS + A
Sbjct: 467 KGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSA 519
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 191/418 (45%), Gaps = 43/418 (10%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
++ L N ++Q+H+ + + S+ ++ A K+F++ +P+
Sbjct: 7 LVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLK-NLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V L+NS +++Y EE ++LF L+ G PD +T LKAC G+ L +G+ +H
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126
Query: 124 GEIIRSGFERFGS---IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
G ++ + GS + +VELY+ CGQM + +KVF+E D ++ M+ G+ +
Sbjct: 127 GFAKKN--DEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D ++ L LF +M V LD T+V+V+
Sbjct: 185 DPEEALALFSQMVMMDCVV------------------------------LDPVTLVSVVS 214
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA+L V G +H + + + N+L++ Y K G A N+F ++P K+V+
Sbjct: 215 ACAQLLNVKAGSCVHGLVIRRE-FDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVI 273
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FA 358
SW+ MI+ A N + L+ +MI K PN T V L CA + +E+ +++ A
Sbjct: 274 SWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIA 333
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
G + ++D+ + C EA DL + + + + W +LLS +G
Sbjct: 334 VWKGFEL---DFSVSTALIDMYMKCSCPDEAVDLFQRLP-KKDVVSWVALLSGYAQNG 387
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 16/150 (10%)
Query: 21 IHAHFLRHKLHQSNLILAHFV---SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+H + +R + + + A + S CG+L + A K+F M V++++SMI AY +
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIELYSKCGSLGD---AVKLFKGMIVRDVVIWSSMIAAYGI 486
Query: 78 NGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGF 131
+G E +++F ++KN + P+ TF +L AC G + G + VH +R
Sbjct: 487 HGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDS 546
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E FG + V+L GQ+ M + + M
Sbjct: 547 EHFGIM----VDLLGRIGQLGKAMDIINRM 572
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 247/442 (55%), Gaps = 39/442 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF SVCG A ++F++M V+ + +I Y G +E + LF + +
Sbjct: 146 LLHFYSVCGKWGG---AGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFL---KMDV 199
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ TF +L AC +G L +G+ VHG + + F + +V++Y C + + K
Sbjct: 200 VPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARK 259
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FDE+ +R +VSW +IS L + + ++
Sbjct: 260 LFDELP-------------------------------DRDIVSWTSIISGLVQCKQPKDS 288
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF++M+ E D + +VL CA LGA+D G+W+ Y E G+ + +G ALVD
Sbjct: 289 LELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDI-HIGTALVD 347
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG ++ A ++F IP +N+ +WNA++ GLA +G G ++ +E MI G+ PN+ T
Sbjct: 348 MYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVT 407
Query: 337 FVGVLTCCAHAGLVEKARELFASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
F+ +LT C H+GLV + R F M + + P LEHYGCM+D+L R+G + EAY IR+
Sbjct: 408 FLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRN 467
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+ IWG+LLS+C+ +G+VEL++ + L+ L+ +SG YVLLSNIYA RWDD
Sbjct: 468 MPLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDV 527
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+R M++ ++K PG S+IE
Sbjct: 528 TRVRRLMKDKGIRKFPGSSVIE 549
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 193/422 (45%), Gaps = 45/422 (10%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQ 59
++ ++L +H T L QIHAH + L +L+ G + + YA NQ
Sbjct: 4 LKLRLLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQ 63
Query: 60 MR-NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ L +N++I AY+ + + ++ + G PD YTF +LKAC ++
Sbjct: 64 TDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQE 123
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ VHG ++ GF ++ ++ Y+ CG+ +VFD
Sbjct: 124 GEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFD------------------- 164
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
EM R VVSW +IS ++G EA+ LF +M + AT V+V
Sbjct: 165 ------------EMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVVP---NVATFVSV 209
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L C R+G + +G+ +H +V VGNALVD Y KC L AR +F E+P ++
Sbjct: 210 LVACGRMGYLSMGKGVHGLVYKRAFGIGLV-VGNALVDMYVKCECLCEARKLFDELPDRD 268
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR--EL 356
+VSW ++ISGL + + +EL+ M GV P++ VL+ CA G ++ R +
Sbjct: 269 IVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQE 328
Query: 357 FASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ G+ + H G +VD+ + GC+ A + + R N W +LL H
Sbjct: 329 YIERQGIEWDI----HIGTALVDMYAKCGCIEMALHIFNGIPNR-NIFTWNALLGGLAMH 383
Query: 416 GH 417
GH
Sbjct: 384 GH 385
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 264/459 (57%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H +R+ H + + V + K A ++F+ +R+ + + + +I + G
Sbjct: 312 QLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYG 371
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V+LF ++ + D++ A L+ C D+ +G +H ++SG R +
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN 431
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + + +F+ M+ RD++ MI + + G++ K F +M R+V++
Sbjct: 432 SLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVIT 491
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + L+++ +M + + D T V + CA +GA +G I +
Sbjct: 492 WNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHT 551
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL SV NA++ Y KCG + AR F + RK++VSWNAMI+G + +G G+
Sbjct: 552 VKVGLILDT-SVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQA 610
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E+++ ++ KG P+ ++V VL+ C+H+GLVE+ + F M H+I P LEH+ CMVD
Sbjct: 611 IEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVD 670
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA +LI M ++P A +WG+LLS+C+THG+ +LAE A K L +L+ SG
Sbjct: 671 LLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGG 730
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LL+ +YA+ G+ DD+ +R MR+ +KKSPG S +E
Sbjct: 731 YMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWME 769
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 200/429 (46%), Gaps = 36/429 (8%)
Query: 24 HFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
+ LR ++ + N+I H + + G L + A ++F +M V +N+++ Y +G
Sbjct: 81 NLLRDEITEPNVI-THNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQF 139
Query: 82 EEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ +F ++ G P+ +TF ++K+C +G V + G + + + ++
Sbjct: 140 LNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTA 199
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+V++ CG MD K F + + +I RN M+ G+ K VD L +F+ M ER VVSW
Sbjct: 200 LVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSW 259
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N++IS+L KSGR EAL + +M + D T + L CARL +++ G+ +H
Sbjct: 260 NMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIR 319
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ L V +A+V+ Y KCG A+ VF + +N VSW +I G G VE
Sbjct: 320 N-LPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVE 378
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA---------------SMTGLHS 365
L+ QM A+ ++ ++ +++ C + + +L + S+ +++
Sbjct: 379 LFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYA 438
Query: 366 IVPNLEH---------------YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
NL++ + M+ + G + +A + MS R N W ++L
Sbjct: 439 KCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR-NVITWNAMLG 497
Query: 411 SCRTHGHVE 419
+ HG E
Sbjct: 498 AYIQHGAEE 506
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 166/377 (44%), Gaps = 54/377 (14%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
A L++C L + +H +I G ++ ++ Y SCG + D + DE
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
++ +VI N+M++G+ K G + + LF M R V SWN ++S +SG+ AL +F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 221 HEMRDQAFELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS-----VGNAL 274
MR L A T V+ C LG W + GL K S V AL
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALG------WHEVALQLLGLLSKFDSQDDPDVQTAL 200
Query: 275 VDFYCKCGILDTA--------------RN-----------------VFKEIPRKNVVSWN 303
VD +CG +D A RN +FK +P ++VVSWN
Sbjct: 201 VDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWN 260
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+IS L+ +GR +++ M KGV P+ T+ LT CA +E ++L +
Sbjct: 261 MVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVI-- 318
Query: 364 HSIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----H 417
+P+++ Y MV++ + GC +EA + S+ R N+ W L+ +G
Sbjct: 319 -RNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDR-NSVSWTVLIGGFLQYGCFSES 376
Query: 418 VELAEHAVKELINLEPW 434
VEL EL+ ++ +
Sbjct: 377 VELFNQMRAELMAVDQF 393
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 4/417 (0%)
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
N ++ +N+MI Y G +E +++ + + GI DE+T+ +++AC G L++G+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 122 VHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH ++R E F +V LY CG+ D+ +F++M +D++ N ++ G+ G
Sbjct: 308 VHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ + +F+EM+E++++SW +MIS L ++G E L+LF M+ + FE + +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA GQ H+ G + +S GNAL+ Y KCG+++ AR VF+ +P + V
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNA+I+ L +G G V++YE+M+ KG+ P++ T + VLT C+HAGLV++ R+ F SM
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++ I P +HY ++D+L RSG +A +I S+ +P A IW +LLS CR HG++EL
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +L L P + G Y+LLSN++A G+W++ +R MR+ VKK S IE
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 234/564 (41%), Gaps = 130/564 (23%)
Query: 12 RNTRTHLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS------ 64
R T L + +H + + IL + V +E+ YA ++F+++ P
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 65 ---------------------------VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW 97
+++N+MI +S N + LF +K+ G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCV--HGEIIRSGFERFGSIRIGVVELYTSCGQ----M 151
PD +TFA +L V D QCV H ++SG S+ +V +Y+ C +
Sbjct: 146 PDNFTFASVLAGLALVADDE-KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER-SVVSWNLMISSLGKS 210
KVFDE+ +D M+ G+ K G D G L M + +V++N MIS
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS- 269
G EAL + M ELDE T +V+ CA G + +G+ +H+Y L R+ S
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV----LRREDFSF 320
Query: 270 -VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA------------------------ 304
N+LV Y KCG D AR +F+++P K++VSWNA
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 305 -------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA-----------H 346
MISGLA NG GE G++L+ M +G P F G + CA H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 347 A------------------------GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
A G+VE+AR++F +M L S+ N ++ LG+
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN-----ALIAALGQ 495
Query: 383 SGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-----PW 434
G EA D+ M IRP+ ++L++C H L + K ++E P
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC---SHAGLVDQGRKYFDSMETVYRIPP 552
Query: 435 NSGNYVLLSNIYAEGGRWDDAETL 458
+ +Y L ++ G++ DAE++
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESV 576
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 103 FAPLLKACLGV--GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+A L+ CL + L++ + VHG II GF+ I ++++Y +++ ++FDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 161 MSHRDVIVRNLMIHGFCKKGDVD--KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
+S D I R M+ G+C GD+ +G++ + R V +N MI+ + A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI--HSYAESSGLYRKVVSVGNALVD 276
LF +M+ + F+ D T +VL A L A D Q + H+ A SG + SV NALV
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGA-GYITSVSNALVS 192
Query: 277 FYCKCG----ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE--------- 323
Y KC +L +AR VF EI K+ SW M++G NG +LG EL E
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 324 -----------------------QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+M++ G+ ++ T+ V+ CA AGL++ +++ A +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ +V + + G EA + M + + W +LLS + GH+
Sbjct: 313 LRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGE 369
Query: 421 AEHAVKEL 428
A+ KE+
Sbjct: 370 AKLIFKEM 377
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 236/419 (56%), Gaps = 6/419 (1%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL---GVGDLR-VG 119
S L N++I+A + + + L+A L G P +T LLK+ V R +
Sbjct: 170 SADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLA 229
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
VH ++ G F + ++ ++ G++ D + + + D N +I + +
Sbjct: 230 LAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G V LF EM R+ VSW+ M++ ++G EAL LF M+ D+ +V V
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+LG ++ G+W+H Y +++ + R V +G ALVD Y KCG + A VFK + KN
Sbjct: 350 LAACAQLGVLEQGKWVHGYLKANNI-RITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKN 408
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V++W MI GLA +GRG +EL+ QM GV P+ F+G L C H GLV+K RELF
Sbjct: 409 VLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFD 468
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + I P +EHYGCMVD+L R+G + EA +++ M ++P+A IWG+L++ CR H +V
Sbjct: 469 SMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV 528
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
ELAE+ VK I LEP SG YVLL NIYA GR A +R MRE V K+PG S +E
Sbjct: 529 ELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVE 587
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 37/320 (11%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
++ + A +F++M + + +++M+ Y G E + LFA ++ G+ PD
Sbjct: 283 LITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPD 342
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+ +L AC +G L G+ VHG + + + +V++Y CG+M M+VF
Sbjct: 343 DTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFK 402
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
M ++V+ MI G L GR SEAL L
Sbjct: 403 VMKEKNVLAWTTMIKG-------------------------------LAMHGRGSEALEL 431
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M + D+ + L C G VD G + S G+ K+ G +VD
Sbjct: 432 FSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG-CMVDLL 490
Query: 279 CKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA-T 336
+ G+L+ AR + +++P K + + W A+++G F+ EL + + I + P+K+
Sbjct: 491 ARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE--LEPDKSGA 548
Query: 337 FVGVLTCCAHAGLVEKAREL 356
+V + A +G ARE+
Sbjct: 549 YVLLGNIYAASGRHASAREI 568
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + + + + + V + E++ A ++F M+ +VL + +MIK +++G
Sbjct: 365 VHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGR 424
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR-----SGFERFG 135
E ++LF+ ++ LG+ PD+ F L AC G + G+ + ++R E +G
Sbjct: 425 GSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFR---E 191
+ V+L G +++ ++ ++M + D ++ ++ G +V+ Y+ + E
Sbjct: 485 CM----VDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE 540
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
+ ++ L+ + SGR + A + H MR++ +D+ + + I + +G
Sbjct: 541 LEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKG--VDKTPGCSTVEIKGVIHQFIVG 598
Query: 252 QWIHSYAE 259
H + E
Sbjct: 599 DLSHPFIE 606
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 267/496 (53%), Gaps = 40/496 (8%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH + L + A +S ++ A K+F+++ N ++ + + A + G
Sbjct: 825 LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 884
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
EE + F+ ++ G+ P+++ +LKAC + D R G+ +H I+++ FE I
Sbjct: 885 YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 944
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----S 196
++ +Y+ CG ++ +VFD + +D++V N M+ G+ + G V + L L ++M++ +
Sbjct: 945 LIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPN 1004
Query: 197 VVSWNLMI---SSLGKSGRDSEALRL--------------------------------FH 221
VVSWN +I S +G SE RL F
Sbjct: 1005 VVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFK 1064
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
EM DQ F T+ ++LP C + + G+ IH YA G+ K V V +ALVD Y KC
Sbjct: 1065 EMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV-EKDVYVRSALVDMYAKC 1123
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G + A+ +F +P +N V+WN++I G A +G +EL+ QM + TF VL
Sbjct: 1124 GYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVL 1183
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+HAG+VE LF M + I P LEHY CMVD+LGR+G + EAYDLI++M + P+
Sbjct: 1184 NACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPD 1243
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
+WG+LL +CR HG++ELAE A + L LEP + G+ +LLSN+YA+ GRW +A ++
Sbjct: 1244 KFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKM 1303
Query: 462 MRENNVKKSPGQSLIE 477
M++ K PG S IE
Sbjct: 1304 MKQRKFGKFPGCSWIE 1319
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 243/461 (52%), Gaps = 37/461 (8%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+HAH ++ + + L S CG + E A +F +R +++ + + I +
Sbjct: 235 QLHAHVVKMQYLSETAVGNALLTLYSKCGMMEE---AEIVFESLRQRNIISWTASINGFY 291
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+G ++ +K F++++ GI P+E+TF+ +L +C V D G+ H ++I+ G
Sbjct: 292 QHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVF 351
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y+ G+MD+ K F +M R S
Sbjct: 352 VGTAIIDMYSGLGEMDEAEKQFKQMG------------------------------RAAS 381
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSWN +I+ + + +A+ F M + +E T + C+ ++ IHS
Sbjct: 382 NVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHS 441
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
S + + V ++L++ Y +CG L+ A VF +I +VVSWN++I + NG
Sbjct: 442 RLIKSNV-ESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPW 500
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L +MI +G P TF+ VL+ C+H+GLV++ +E F SM +SI P H CM
Sbjct: 501 KAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCM 560
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + A D I+ ++++P A+IW LL++CR + ++++AE+ +++++LEP ++
Sbjct: 561 VDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV LSN+YAE GRW DAE R M + + K PG S IE
Sbjct: 621 TVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIE 661
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 174/396 (43%), Gaps = 35/396 (8%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H ++ L + + + E+ A +++++M + N +I AY+ NG
Sbjct: 136 HCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFF 195
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
+ ++F + N+G P+ YT++ +L C + ++ G+ +H +++ + ++ +
Sbjct: 196 VQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNAL 255
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ LY+ CG M++ VF+ + R++I I+GF + GD K L F MRE +
Sbjct: 256 LTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGI---- 311
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
E +E T VL C + G+ H+
Sbjct: 312 ---------------------------EPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKK 344
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR-KNVVSWNAMISGLAFNGRGELGVE 320
G+ V VG A++D Y G +D A FK++ R + VSWNA+I+G N + E +E
Sbjct: 345 GMASGVF-VGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAME 403
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
+ +M+ + V+ N+ T+ + C+ + ++ + + ++ NL +++
Sbjct: 404 AFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK-SNVESNLHVASSLIEAY 462
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ G + A + +S + W S++ + +G
Sbjct: 463 TQCGSLENAVQVFTQIS-DADVVSWNSIIKAYSQNG 497
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 33/245 (13%)
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+Y F+ L C G + +G+ H +++ G + ++++Y CG++D ++V+D
Sbjct: 114 QYVFSAL-SFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD 172
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+M+ D + N +IS+ ++G +A ++
Sbjct: 173 KMTSLD-------------------------------AATCNCLISAYARNGFFVQAFQV 201
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F ++ + + T +L +C + A+ G+ +H++ Y +VGNAL+ Y
Sbjct: 202 FMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQ-YLSETAVGNALLTLYS 260
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG+++ A VF+ + ++N++SW A I+G +G + ++ + M G+ PN+ TF
Sbjct: 261 KCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSI 320
Query: 340 VLTCC 344
VL C
Sbjct: 321 VLASC 325
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 43/356 (12%)
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ +H ++ G R ++ YT CGQ+ + K+FD++ + + I R +++ G C
Sbjct: 822 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN-IRRWIVLTGACA 880
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+ +G Y EAL F EM+ + ++ + ++
Sbjct: 881 R----RGFY--------------------------EEALSAFSEMQKEGLRPNQFVLPSI 910
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L C L G+ +H+ + + + +AL+ Y KCG ++ A VF I K+
Sbjct: 911 LKACGHLSDRRTGENMHTVILKNS-FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKD 969
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+V NAM+SG A +G ++L ++M GV PN ++ ++ + G E+F
Sbjct: 970 LVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFR 1029
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTH 415
MT + + P++ + ++ ++ E +D + M P++ SLL +C
Sbjct: 1030 LMTA-NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNV 1088
Query: 416 GHVELAE--HAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMRENNV 467
++ + H +I +E YV L ++YA+ G +A+ L M E N
Sbjct: 1089 ANLRHGKEIHGYAMVIGVE---KDVYVRSALVDMYAKCGYISEAKILFYMMPERNT 1141
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 44/223 (19%)
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ F+ T + + AR A+ G+ +H++ GL R + L+ FY +CG L
Sbjct: 797 RTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLAR-LTYFAAKLMSFYTECGQLS 855
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
AR +F +IP N+ W + A G E + + +M +G+ PN+ +L C
Sbjct: 856 NARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACG 915
Query: 346 H-----------------------------------AGLVEKARELFASMTGLHSIVPNL 370
H G VEKA +F + +V N
Sbjct: 916 HLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMN- 974
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLS 410
MV + G V EA BL++ M ++PN W +L++
Sbjct: 975 ----AMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIA 1013
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 114/276 (41%), Gaps = 56/276 (20%)
Query: 240 PICARLG---AVDIGQWIHSYAESSGLYRKVVSVGNAL---VDFYCKC------------ 281
P C+ L AVD+ + I+ +SG Y+ +S GN + VD C
Sbjct: 13 PTCSLLPGCIAVDLQKNINPIISASGPYKGCMSKGNVVGGWVDLNNACILFEKTPKRIGV 72
Query: 282 GILDTARNVFKEIPRKNVVSW--------------------NAMISGLAFNGRG---ELG 318
I ++ R+ + P + V + S L+F GR ELG
Sbjct: 73 SITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQYVFSALSFCGREGCVELG 132
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ ++ G+ ++ ++ A G V+ A ++ MT L + N C++
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCN-----CLIS 187
Query: 379 VLGRSGCVREAYDL---IRSMSIRPNAAIWGSLLSSCRTHGHV----ELAEHAVKELINL 431
R+G +A+ + I +M RPN + ++L+ C T + +L H VK + L
Sbjct: 188 AYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVK-MQYL 246
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
GN +L +Y++ G ++AE + +R+ N+
Sbjct: 247 SETAVGNALL--TLYSKCGMMEEAEIVFESLRQRNI 280
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 267/496 (53%), Gaps = 40/496 (8%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH + L + A +S ++ A K+F+++ N ++ + + A + G
Sbjct: 49 LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 108
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
EE + F+ ++ G+ P+++ +LKAC + D R G+ +H I+++ FE I
Sbjct: 109 YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 168
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----S 196
++ +Y+ CG ++ +VFD + +D++V N M+ G+ + G V + L L ++M++ +
Sbjct: 169 LIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPN 228
Query: 197 VVSWNLMI---SSLGKSGRDSEALRL--------------------------------FH 221
VVSWN +I S +G SE RL F
Sbjct: 229 VVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFK 288
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
EM DQ F T+ ++LP C + + G+ IH YA G+ K V V +ALVD Y KC
Sbjct: 289 EMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV-EKDVYVRSALVDMYAKC 347
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G + A+ +F +P +N V+WN++I G A +G +EL+ QM + TF VL
Sbjct: 348 GYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVL 407
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+HAG+VE LF M + I P LEHY CMVD+LGR+G + EAYDLI++M + P+
Sbjct: 408 NACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPD 467
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
+WG+LL +CR HG++ELAE A + L LEP + G+ +LLSN+YA+ GRW +A ++
Sbjct: 468 KFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKM 527
Query: 462 MRENNVKKSPGQSLIE 477
M++ K PG S IE
Sbjct: 528 MKQRKFGKFPGCSWIE 543
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 154/356 (43%), Gaps = 43/356 (12%)
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ +H ++ G R ++ YT CGQ+ + K+FD++ + + I R +++ G C
Sbjct: 46 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN-IRRWIVLTGACA 104
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
+ +G Y EAL F EM+ + ++ + ++
Sbjct: 105 R----RGFY--------------------------EEALSAFSEMQKEGLRPNQFVLPSI 134
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L C L G+ +H+ + + + +AL+ Y KCG ++ A VF I K+
Sbjct: 135 LKACGHLSDRRTGENMHTVILKNS-FESDAYIISALIYMYSKCGHVEKACRVFDWIVDKD 193
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+V NAM+SG A +G + L ++M GV PN ++ ++ + G E+F
Sbjct: 194 LVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFR 253
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTH 415
MT + + P++ + ++ ++ E +D + M P++ SLL +C
Sbjct: 254 LMTA-NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNV 312
Query: 416 GHVELAE--HAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMRENNV 467
++ + H +I +E YV L ++YA+ G +A+ L M E N
Sbjct: 313 ANLRHGKEIHGYAMVIGVE---KDVYVRSALVDMYAKCGYISEAKILFYMMPERNT 365
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 88/223 (39%), Gaps = 44/223 (19%)
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ F+ T + + AR A+ G+ +H++ GL R + L+ FY +CG L
Sbjct: 21 RTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLAR-LTYFAAKLMSFYTECGQLS 79
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
AR +F +IP N+ W + A G E + + +M +G+ PN+ +L C
Sbjct: 80 NARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACG 139
Query: 346 H-----------------------------------AGLVEKARELFASMTGLHSIVPNL 370
H G VEKA +F + +V N
Sbjct: 140 HLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMN- 198
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLS 410
MV + G V EA +L++ M ++PN W +L++
Sbjct: 199 ----AMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIA 237
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 273/477 (57%), Gaps = 9/477 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L R + + ++H+ ++ +S+L+ + V G I A ++F++M N
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNL----GIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ + S++ A++ + P + ++L + G+ PD + FA +++AC +G LR+G+
Sbjct: 70 VSWASILTAHN---KALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQ 126
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH + S F ++ ++++YT CGQ D+ VFD + ++ + MI G+ + G
Sbjct: 127 VHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGR 186
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLP 240
+ + LF + R++ SW +IS L +SG + LF+EMR + ++ D + +V+
Sbjct: 187 KCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVG 246
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA L +++G+ IH + G + + + NALVD Y KC + A+++F +PRK+V+
Sbjct: 247 GCANLALLELGKQIHGLVIALG-FESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVI 305
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW ++I G A +G+ E + LY++M+ + PN+ TFVG+L C+HAGLV + RELF SM
Sbjct: 306 SWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSM 365
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
T +SI P+L+HY C++D+L RSG + EA +L+ + +P+ W SLLS+C H ++E+
Sbjct: 366 TTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEM 425
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+++L+P + Y+LLSN+YA W +R M V+K PG S I+
Sbjct: 426 GVRIADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSID 482
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 251/434 (57%), Gaps = 5/434 (1%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+++ A ++F M +N+MI Y G +E + L ++ LGI D+ T+ ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV----VELYTSCGQMDDGMKVFDEMSH 163
AC VG ++G+ +H I+++ S + V + LY ++D+ K+F M
Sbjct: 297 SACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R++I N ++ G+ G +++ F EM +++++ +MIS L ++G E L+LF +M
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
R FE + L C+ LGA++ G+ +H+ G Y +SVGNA++ Y KCG+
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG-YESSLSVGNAMISMYAKCGV 475
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A +VF +P ++VSWN+MI+ L +G G +EL++QM+ +GV P++ TF+ VLT
Sbjct: 476 VEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTA 535
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLVEK R F SM + I P +HY MVD+ R+G A +I SM +P A
Sbjct: 536 CSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W +LL+ CR HG+++L A ++L L P N G YVLLSNIYA+ GRW+D +R MR
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMR 655
Query: 464 ENNVKKSPGQSLIE 477
+ V+K P S IE
Sbjct: 656 DQAVRKEPACSWIE 669
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 200/434 (46%), Gaps = 56/434 (12%)
Query: 46 TLNEIKYATKIFN----QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
L ++ +IFN MR+ + +N+MI Y+ NG ++LF ++ PD++
Sbjct: 91 ALGNLELGREIFNGTPLYMRDS--VFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 102 TFAPLLKA-CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV---------ELYTSCGQM 151
TF +L A L VG+ + +H ++++G S + + EL C M
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAM 208
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
K+FDEM RD + MI G+ + D++ +F M E +WN MIS G
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---YRKVV 268
EAL L +MR + D+ T ++ CA +G+ +G+ +H+Y + L + +
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCL 328
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA------------------------ 304
SV NAL+ YCK +D AR +F +P +N+++WNA
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388
Query: 305 -------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
MISGLA NG G+ G++L++QM G P F G LT C+ G +E R+L
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
A + L +L M+ + + G V A + +M + W S++++ HGH
Sbjct: 449 AQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGH 506
Query: 418 ----VELAEHAVKE 427
+EL + +KE
Sbjct: 507 GVKAIELFDQMLKE 520
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 166/401 (41%), Gaps = 61/401 (15%)
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ + VH +I SGF+ G ++E+Y + ++F+E+ + D I R +I
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLI 86
Query: 174 HGFCKKGDVDKGLYLFR--EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+C G+++ G +F + R V +N MI+ +G AL LF MR F D
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 232 EATVVAVL-PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK--------CG 282
+ T +VL + +G +H +G+ SV NAL+ Y K C
Sbjct: 147 DFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCS 206
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-------------- 328
+ +AR +F E+P+++ ++W MI+G N E++E M+
Sbjct: 207 AMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVH 266
Query: 329 -----------------GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN-- 369
G+ + T+ +++ CA+ G + +++ A + + + PN
Sbjct: 267 CGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK-NELNPNHS 325
Query: 370 --LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA-----E 422
L ++ + ++ V EA + +M +R N W ++LS G +E A E
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEEAKSFFEE 384
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
VK L+ L SG A+ G D+ L MR
Sbjct: 385 MPVKNLLTLTVMISG--------LAQNGFGDEGLKLFKQMR 417
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 22/259 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+HA L H ++S+L + + +S+ ++ A +F M + ++ +NSMI A +
Sbjct: 446 QLHAQ-LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSI 137
G + ++LF + G++PD TF +L AC G + G+ ++ S G
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHR------DVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+V+L+ G V D M + + ++ IHG G ++ LF+
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG-IEAAEQLFKL 623
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M + ++ L+ + GR ++ ++ MRDQA + P C+ +++
Sbjct: 624 MPQND-GTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKE--------PACSW---IEVE 671
Query: 252 QWIHSYAESSGLYRKVVSV 270
+H + ++ +V+SV
Sbjct: 672 NKVHVFMVDDDVHPEVLSV 690
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 257/462 (55%), Gaps = 40/462 (8%)
Query: 21 IHAHFLRHKLHQ-----SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+HA+ +R+ ++ + L + CG L A ++FN + +V+ + +MI
Sbjct: 217 MHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLG---LARQLFNGLTQKTVVSWTAMIAGC 273
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ EE KLF ++ I+P+E T L+ C G L++G+ +H I+R+GF
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ +V++Y C + + +FD +RD
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRD------------------------------ 363
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
V+ W M+S+ ++ +A LF +MR + T+V++L +CA GA+D+G+W+H
Sbjct: 364 -VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVH 422
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
SY + + + + ALVD Y KCG ++ A +F E +++ WNA+I+G A +G G
Sbjct: 423 SYIDKERVEVDCI-LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYG 481
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E ++++ +M +GV PN TF+G+L C+HAGLV + ++LF M +VP +EHYGC
Sbjct: 482 EEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC 541
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G + EA+++I+SM I+PN +WG+L+++CR H + +L E A +L+ +EP N
Sbjct: 542 MVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPEN 601
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G VL+SNIYA RW DA +R M+ +KK PG S+IE
Sbjct: 602 CGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIE 643
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 35/311 (11%)
Query: 103 FAP-LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
AP +LKAC V ++G+ +HG +++ G +R + ++ +Y C ++ VFD+M
Sbjct: 96 MAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM 155
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
RDV+ + MI + + D L L REM F
Sbjct: 156 MERDVVSWSTMIRSLSRNKEFDMALELIREMN--------------------------FM 189
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA-ESSGLYRKVVSVGNALVDFYCK 280
++R E +V+++ + A + +G+ +H+Y +S V AL+D Y K
Sbjct: 190 QVRPS-----EVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 244
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG L AR +F + +K VVSW AMI+G + R E G +L+ +M + + PN+ T + +
Sbjct: 245 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSL 304
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
+ C G ++ ++L A + + +L +VD+ G+ +R A L S R
Sbjct: 305 IVECGFTGALQLGKQLHAYIL-RNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNR- 362
Query: 401 NAAIWGSLLSS 411
+ IW ++LS+
Sbjct: 363 DVMIWTAMLSA 373
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 34/301 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA+ LR+ S + V + G ++I+ A +F+ +N V+++ +M+ AY+
Sbjct: 319 QLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQAN 378
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
++ LF ++ G+ P + T LL C G L +G+ VH I + E +
Sbjct: 379 CIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNT 438
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V++Y CG ++ ++F E RD+ + N +I GF G
Sbjct: 439 ALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHG------------------- 479
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI-HSYA 258
EAL +F EM Q + ++ T + +L C+ G V G+ +
Sbjct: 480 ------------YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 527
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGEL 317
+ GL ++ G +VD + G+LD A + K +P + N + W A+++ + +L
Sbjct: 528 HTFGLVPQIEHYG-CMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQL 586
Query: 318 G 318
G
Sbjct: 587 G 587
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 254/429 (59%), Gaps = 5/429 (1%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +I + M + +N+MI Y +G E+ + LF ++ LG+ DE T+ ++ AC
Sbjct: 242 AREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACAD 301
Query: 113 VGDLRVGQCVHGEIIRSGF--ERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIV 168
G +G+ VH I+++ +R + +G ++ LY G++D K+F EM +D+I
Sbjct: 302 GGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIIT 361
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N ++ G+ G +++ F +M E+++++W +MIS L ++G +AL+LF++M+ +
Sbjct: 362 WNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY 421
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E ++ + C+ LGA++ G+ +H+ G + +SVGNA++ Y +CGI++ AR
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLG-HDSTLSVGNAMITMYARCGIVEAAR 480
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+F +P + VSWN+MI+ L +G G +ELYEQM+ +G+ P++ TF+ VL+ C+HAG
Sbjct: 481 TMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVE+ F SM + I P +HY M+D+ R+G +A ++I SM A IW +L
Sbjct: 541 LVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEAL 600
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L+ CRTHG+++L A ++L L P + G YVLLSN+YA GRW+D R MR+ VK
Sbjct: 601 LAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
Query: 469 KSPGQSLIE 477
K P S E
Sbjct: 661 KEPACSWTE 669
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 217/463 (46%), Gaps = 59/463 (12%)
Query: 21 IHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQ----MRNPSVLLFNSMIKAY 75
++A L ++ Q ++I ++ L +K A +IFN+ MR+ + +N+MI Y
Sbjct: 65 VYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRD--TVFYNAMITGY 122
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA-CLGVGDLRVGQCVHGEIIRSGFERF 134
S ++LF ++ PD++TFA +L A L D R +HG +++ G E F
Sbjct: 123 SHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIF 182
Query: 135 GSIRIGVVELYTSCGQ---------MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++ ++ +Y C M K+FDEM R+ + +I G+ + GD+
Sbjct: 183 PAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGA 242
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+ M E+ ++WN MIS G +AL LF +MR ++DE+T +V+ CA
Sbjct: 243 REILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302
Query: 246 GAVDIGQWIHSYAESSGLYRK---VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
G +G+ +H+Y + L ++SVGN L+ Y K G +D AR +F E+P K++++W
Sbjct: 303 GFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITW 362
Query: 303 NA-------------------------------MISGLAFNGRGELGVELYEQMIAKGVS 331
N MISGLA NG GE ++L+ QM G
Sbjct: 363 NTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYE 422
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN F G +T C+ G +E R+L A + L H L M+ + R G V A
Sbjct: 423 PNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD--STLSVGNAMITMYARCGIVEAAR 480
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGH----VELAEHAVKELI 429
+ +M + W S++++ HGH +EL E +KE I
Sbjct: 481 TMFLTMPF-VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGI 522
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 59/398 (14%)
Query: 103 FAPLLKAC-LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
FA L C + + + VHG +I SGF+ G I ++++Y K+FDE+
Sbjct: 15 FAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEI 74
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFRE--MRERSVVSWNLMISSLGKSGRDSEALRL 219
DVI R +I + G++ +F E + R V +N MI+ A+ L
Sbjct: 75 PQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIEL 134
Query: 220 FHEMRDQAFELDEATVVAVLPICARL--GAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F MR F+ D+ T +VL + GQ +H G+ +V NAL+
Sbjct: 135 FRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQ-MHGTVVKFGI-EIFPAVLNALLSV 192
Query: 278 YCKCG---------ILDTARNVFKEIPRKNV----------------------------- 299
Y KC ++ +AR +F E+P++N
Sbjct: 193 YVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQ 252
Query: 300 --VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
++WNAMISG +G E + L+ +M GV +++T+ V++ CA G +++
Sbjct: 253 PGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVH 312
Query: 358 ASMTGLHSIVPNLEHY----GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
A + + + P+ + ++ + + G V A + M ++ + W +LLS
Sbjct: 313 AYILK-NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGYV 370
Query: 414 THGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEG 449
G +E A+ ++ NL W V++S + G
Sbjct: 371 NAGRMEEAKSFFAQMPEKNLLTWT----VMISGLAQNG 404
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 30/267 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+HA + H H S L + + +++ ++ A +F M + +NSMI A +
Sbjct: 446 QLHAQIV-HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQH 504
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G + ++L+ + GI PD TF +L AC G + G S E +G I
Sbjct: 505 GHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGN----RYFNSMLENYG-IA 559
Query: 139 IG------VVELYTSCGQMDDGMKVFDEMSHRD-VIVRNLMIHGFCKKGDVDKGL----Y 187
G +++L+ G+ D V D M + ++ G G++D G+
Sbjct: 560 PGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEK 619
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF+ + + ++ L+ + GR ++ R MRD+ + + P C+
Sbjct: 620 LFKLIPQHD-GTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKE--------PACS---W 667
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNAL 274
++ +H + ++ +V+S+ N L
Sbjct: 668 TEVENKVHVFLVDDTVHPEVLSIYNYL 694
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 251/465 (53%), Gaps = 36/465 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+HAH + +S +L +++ + I Y +F + P LFNS+IK+ S
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
V + + + + P YTF ++K+C + LR+G+ VH + SGF
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ +V Y+ CG M+ +V F M E+S
Sbjct: 144 VQAALVTFYSKCGDMEGARQV-------------------------------FDRMPEKS 172
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V+WN ++S ++G EA+++F++MR+ FE D AT V++L CA+ GAV +G W+H
Sbjct: 173 IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ 232
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y S GL V +G AL++ Y +CG + AR VF ++ NV +W AMIS +G G+
Sbjct: 233 YIISEGLDLN-VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 317 LGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
VEL+ +M G PN TFV VL+ CAHAGLVE+ R ++ MT + ++P +EH+ C
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNA---AIWGSLLSSCRTHGHVELAEHAVKELINLE 432
MVD+LGR+G + EAY I + A A+W ++L +C+ H + +L K LI LE
Sbjct: 352 MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P N G++V+LSNIYA G+ D+ +R M NN++K G S+IE
Sbjct: 412 PDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 271/478 (56%), Gaps = 22/478 (4%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMR 61
++ +L + L QIHA ++ L ++ ++ C G + YA+ +F++++
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD--EYTFAPLLKACLGVGDLRVG 119
+P+ +F ++IK +S E + L+A + + + E++ +LKAC + G
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEG 128
Query: 120 QCVHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+ VHG+++++ F+ F + +V +Y G+++ +VFD M +RDV+ N MI G+
Sbjct: 129 RQVHGQVLKTHLWFDPF--VGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K G+++ LF EM ER +VS N MI GK EM D +V+
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGK------------EMLSLGLRPDGPAIVS 234
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-R 296
VL A LG V+ G+W+H+Y + + +G+AL+D Y KCG ++ A +VF+ I R
Sbjct: 235 VLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR 294
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+N+ WN+MISGLA +G ++++ +M + PN+ TF+G+L+ C+H GLVE+ +
Sbjct: 295 RNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFY 354
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SM + IVP ++HYGCM+D+ GR+G + +A +I++M + W ++LS+ HG
Sbjct: 355 FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHG 414
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H+E+ + A I L P +S +YVLLSNIYA+ GRWDD +R+ MR+ VKK G S
Sbjct: 415 HIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 472
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 277/478 (57%), Gaps = 13/478 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFL------RHKLHQSNLILAHFVSVCGTLNEIKYATKI 56
+ L LL + QIH H L + + +++LI + + C + A ++
Sbjct: 66 QTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGC-----FECARQL 120
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
F++M + +V+ +N+MI ++ G ++LF +++ G+ PD++T LL C +G+
Sbjct: 121 FDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGET 180
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
++G+ VH +I +S + ++++Y C ++ KVFD +D + N +I G+
Sbjct: 181 KLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGY 240
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K G+++ LF ++ R +VSWN +IS ++G LF M + + D+ T+V
Sbjct: 241 AKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIV 300
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++ A +GA+D G+WIH A L + G+AL+D YCKCG ++ A +F +IP
Sbjct: 301 NLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPE 359
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+V +W MI+G AF+G G +EL+ M A+ PN TFV VL C+H+GLV++ ++
Sbjct: 360 KDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKI 418
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F+SM +SI P +EHYGC+VD+L RSG + +A +I M + P+ +IWG++LS+CR H
Sbjct: 419 FSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHR 478
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
++ELAE A+ EL+ LEP G Y+LLSN+YA GRW ++++R M VKK G S
Sbjct: 479 NMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCS 536
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 270/506 (53%), Gaps = 50/506 (9%)
Query: 17 HLTQIHA-----HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+ Q+HA FL LI A V V G +A +F+++ +P ++N++
Sbjct: 23 QIKQVHALMVLRGFLSDPSALRELIFASSVGVRGG---TAHARLVFDRIPHPDRFMYNTL 79
Query: 72 IKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
I+ + + + V ++A + G+ PD+ TF +L+AC +G G VH
Sbjct: 80 IRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAH 139
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++++G E +R ++ ++ +CG + +FD + D + + MI GF ++GD+
Sbjct: 140 VVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAA 199
Query: 186 LYLFRE-------------------------------MRERSVVSWNLMISSLGKSGRDS 214
LF E +R VVSWN MIS + G
Sbjct: 200 RELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHK 259
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV---VSVG 271
+A+ LF +M+ + D T++++L CA G +D G+ +H + SG + ++ +G
Sbjct: 260 QAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFL--SGRFSRIGPSTVLG 317
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+D Y KCG + +A VF + KNV +WN++I GLA +G ++++++M+ V
Sbjct: 318 NALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVK 377
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ TFV VL C+H G+V+K E F M + I PN++HYGCMVD+L R+G ++EA++
Sbjct: 378 PDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFE 437
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
I +M I PN IW +LL +CR HG +ELAEHA +EL+ SG++VLLSNIYA G
Sbjct: 438 FIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYASVGE 497
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
W +E +R M ++ V K G ++++
Sbjct: 498 WLGSENMRKLMDDSGVNKEAGCAVVD 523
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 264/464 (56%), Gaps = 43/464 (9%)
Query: 20 QIHAH-----FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
QIH H F Q+ L+ + S CG L A K+F++M + +V+ + +MI
Sbjct: 106 QIHCHSTKLGFASDTYAQNTLM--NMYSNCGCLVS---ARKVFDKMEDKTVVSWATMIGV 160
Query: 75 YSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
++ E V+LF ++K+ + P+E T +L AC DL + + +H I GF R
Sbjct: 161 HAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGR 220
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
V++ +++ +CK G V LF + +
Sbjct: 221 H-------------------------------VVLNTVLMDVYCKCGCVQLARDLFDKAQ 249
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E+++ SWN+MI+ + EAL LF EM+ + + D+ T+ ++L C LGA+++G+W
Sbjct: 250 EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKW 309
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+H+Y + + V ++G ALVD Y KCG ++TA VF E+P K+V++W A+I GLA G
Sbjct: 310 LHAYIKKQRIDVDV-ALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCG 368
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ E ++ +++M KGV P+ TFVGVL C+HAG V++ F SM+ + I P +EHY
Sbjct: 369 QAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHY 428
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
G +VD+LGR+G + EA +LI+SM + P+ + G LL +CR HG++E AE A K+L+ ++P
Sbjct: 429 GGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDP 488
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++SG YVLLSNIY +W++A+ R M E ++K PG S IE
Sbjct: 489 YHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIE 532
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 190/417 (45%), Gaps = 42/417 (10%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIFNQMRNPSVLLFNSMI 72
+ L QIHA LR L + V+ C +L E ++YA +F+Q+ NP+ NS+I
Sbjct: 2 SQLKQIHAQMLRTGLFFDPFTASKIVAFC-SLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ + +E + + + G+ PD YTF L K+C + G+ +H + GF
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ +Y++CG + KVFD +M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFD-------------------------------KM 146
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHE-MRDQAFELDEATVVAVLPICARLGAVDIG 251
+++VVSW MI + + +EA+RLF M+ + + +E T+V VL CAR + +
Sbjct: 147 EDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMV 206
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ IH Y + G R VV + L+D YCKCG + AR++F + KN+ SWN MI+G
Sbjct: 207 KRIHEYIDEHGFGRHVV-LNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVE 265
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+ E + L+ +M KG+ +K T +L C H G +E + L A + I ++
Sbjct: 266 DSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKK-QRIDVDVA 324
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+VD+ + G + A + M + W +L+ G E A E+
Sbjct: 325 LGTALVDMYAKCGSIETAIQVFHEMP-EKDVMTWTALILGLAMCGQAENALQYFDEM 380
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/419 (38%), Positives = 236/419 (56%), Gaps = 6/419 (1%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL---GVGDLR-VG 119
S L N++I+A + + + L+A L G P +T LLK+ V R +
Sbjct: 170 SADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGLA 229
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSC-GQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
VH ++ G F + ++ ++ G++ D + + + D N +I + +
Sbjct: 230 LAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYAR 289
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G V LF EM R+ VSW+ M++ ++G EAL LF M+ D+ +V V
Sbjct: 290 AGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGV 349
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+LG ++ G+W+H Y +++ + R V +G ALVD Y KCG + A VFK + KN
Sbjct: 350 LAACAQLGVLEQGKWVHGYLKANNI-RITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKN 408
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V++W MI GLA +GRG +EL+ QM GV P+ F+G L C H GLV+K RELF
Sbjct: 409 VLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFD 468
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + I P +EHYGCMVD+L R+G + EA +++ M ++P+A IWG+L++ CR H +V
Sbjct: 469 SMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNV 528
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
ELAE+ VK I LEP SG YVLL NIYA GR A +R MRE V K+PG S +E
Sbjct: 529 ELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCSTVE 587
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 37/307 (12%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F++M + + +++M+ Y G E + LFA ++ G+ PD+ +L AC
Sbjct: 296 ARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVGVLAACAQ 355
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+G L G+ VHG + + + +V++Y CG+M M+VF M ++V+ M
Sbjct: 356 LGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTM 415
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G L GR SEAL LF +M + D+
Sbjct: 416 IKG-------------------------------LAMHGRGSEALELFSQMERLGVKPDD 444
Query: 233 ATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ L C G VD G + S G+ K+ G +VD + G+L+ AR +
Sbjct: 445 IAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG-CMVDLLARNGLLNEAREMV 503
Query: 292 KEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA-TFVGVLTCCAHAGL 349
+++P K + + W A+++G F+ EL + + I + P+K+ +V + A +G
Sbjct: 504 EKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE--LEPDKSGAYVLLGNIYAASGR 561
Query: 350 VEKAREL 356
ARE+
Sbjct: 562 HASAREI 568
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + + + + + V + E++ A ++F M+ +VL + +MIK +++G
Sbjct: 365 VHGYLKANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGR 424
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR-----SGFERFG 135
E ++LF+ ++ LG+ PD+ F L AC G + G+ + ++R E +G
Sbjct: 425 GSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYG 484
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFR---E 191
+ V+L G +++ ++ ++M + D ++ ++ G +V+ Y+ + E
Sbjct: 485 CM----VDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVVKHWIE 540
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
+ ++ L+ + SGR + A + H MR++ +D+ + + I + +G
Sbjct: 541 LEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKG--VDKTPGCSTVEIKGVIHQFIVG 598
Query: 252 QWIHSYAE 259
H + E
Sbjct: 599 DLSHPFIE 606
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 271/507 (53%), Gaps = 36/507 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFL-RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
IL ++H T L IHA L + S ++ + + YA K+F+++ P
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ L+ S+I Y N +E LF ++ I +T + +LKA + + GQ V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 124 G---------------------------EIIRSGFERFGSIRI----GVVELYTSCGQMD 152
G +I R F+R + ++ Y G M
Sbjct: 125 GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMA 184
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY-LFREMRERSVVSWNLMISSLGKSG 211
+ +FD M +D+ N+M+ G+ GD G LF +M +++V+W+ MI ++G
Sbjct: 185 EAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNG 244
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSV 270
+ +AL LF ++Q + DE ++ ++ C++LG +D + IH+Y S L + V
Sbjct: 245 QPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLL--SDLRV 302
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+L+D Y KCG ++ A +F+ K+++ ++ MI+ LA +G G + L+++M +
Sbjct: 303 FTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANI 362
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P+ TF+GVLT C H GLV++ R+ F MT I P+ +HY C+VD+LGR GC+ EAY
Sbjct: 363 KPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAY 422
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+LIR+M I P++ +WG+LL++CR H +V+LAE A EL +EP NSGNY+LLSNIYA G
Sbjct: 423 NLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAG 482
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
RW +R +RE+ V+K+ G S IE
Sbjct: 483 RWGSVAKVRAKIREHRVRKNRGSSWIE 509
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 231/384 (60%), Gaps = 36/384 (9%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
P+++T+ +LKAC G+G+L +G+ VHG +++ GF
Sbjct: 8 PNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGF-------------------------- 41
Query: 158 FDEMSHRDVIVRNLMIHGFC----KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+V V+N ++H +C +G ++ +F EM + VSW+ MI + GR
Sbjct: 42 -----GDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRS 96
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
S+A+ LF EM+ + DE T+V+VL C LGA+++G+W+ SY E + +K V + NA
Sbjct: 97 SDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERV-QKNVELSNA 155
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D + KCG +D A N+F+ + +N+VSW ++I GLA +GRG V ++E+M+ GV+P+
Sbjct: 156 LIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPD 215
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
F+G+L+ C+H+GLV+K + F SM SIVP +EHYGCMVD+L R+G V+EA +
Sbjct: 216 DVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFV 275
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M I PN +W +L+++CR HG ++L E ++LI EP + NYVLLSNIYA+ W+
Sbjct: 276 QEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWE 335
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+R M +KK PG ++IE
Sbjct: 336 KKTRIREAMDMKGMKKIPGSTMIE 359
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 35/293 (11%)
Query: 37 LAHFVSVC-GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
L H C G I++A K+F++M + +++MI Y G S + + LF ++ G
Sbjct: 51 LVHMYCCCRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKG 110
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ PDE T +L AC G+G L +G+ V + + ++ + +++++ CG +D
Sbjct: 111 VCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKAT 170
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+F R MRER++VSW +I L GR E
Sbjct: 171 NLF-------------------------------RSMRERNIVSWTSVIGGLAMHGRGVE 199
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNAL 274
A+ +F EM D+ + +L C+ G VD G+ + S + + K+ G +
Sbjct: 200 AVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYG-CM 258
Query: 275 VDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
VD C+ G++ A +E+P N V W +I+ +G +LG ++ Q+I
Sbjct: 259 VDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLI 311
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 251/434 (57%), Gaps = 5/434 (1%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+++ A ++F M +N+MI Y G +E + L ++ LGI D+ T+ ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV----VELYTSCGQMDDGMKVFDEMSH 163
AC VG ++G+ VH I+++ S + V + LY ++D+ K+F M
Sbjct: 297 SACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPV 356
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R++I N ++ G+ G +++ F EM +++++ +MIS L ++G E L+LF +M
Sbjct: 357 RNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQM 416
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
R FE + L C+ LGA++ G+ +H+ G Y +SVGNA++ Y KCG+
Sbjct: 417 RLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLG-YESSLSVGNAMISMYAKCGV 475
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A +VF +P ++VSWN+MI+ L +G G +EL++QM+ +GV P++ TF+ VLT
Sbjct: 476 VEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTA 535
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLVEK R F SM + I P +HY MVD+ R+G A +I SM +P A
Sbjct: 536 CSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAP 595
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W +LL+ CR HG+++L A ++L L P N G YVLLSNIYA+ GRW++ +R MR
Sbjct: 596 VWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMR 655
Query: 464 ENNVKKSPGQSLIE 477
+ V+K P S IE
Sbjct: 656 DQAVRKEPACSWIE 669
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 201/434 (46%), Gaps = 56/434 (12%)
Query: 46 TLNEIKYATKIFN----QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
L ++ +IFN MR+ + +N+MI Y+ NG ++LF ++ PD++
Sbjct: 91 ALGNLELGREIFNGTPLYMRDS--VFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 102 TFAPLLKA-CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV---------ELYTSCGQM 151
TF +L A L VG+ + +H ++++G S + + EL SC M
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAM 208
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
K+FDEM RD + MI G+ + D++ +F M E +WN MIS G
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---YRKVV 268
EAL L +MR + D+ T ++ CA +G+ +G+ +H+Y + L + +
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCL 328
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA------------------------ 304
SV NAL+ YCK +D AR +F +P +N+++WNA
Sbjct: 329 SVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVK 388
Query: 305 -------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
MISGLA NG G+ G++L++QM G P F G LT C+ G +E R+L
Sbjct: 389 NLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLH 448
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
A + L +L M+ + + G V A + +M + W S++++ HGH
Sbjct: 449 AQLVHL-GYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGH 506
Query: 418 ----VELAEHAVKE 427
+EL + +KE
Sbjct: 507 GVKAIELFDQMLKE 520
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 166/401 (41%), Gaps = 61/401 (15%)
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ + VH +I SGF+ G ++E+Y + ++F+E+ + D I R +I
Sbjct: 27 ASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLI 86
Query: 174 HGFCKKGDVDKGLYLFR--EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+C G+++ G +F + R V +N MI+ +G AL LF MR F D
Sbjct: 87 TAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPD 146
Query: 232 EATVVAVL-PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK--------CG 282
+ T +VL + +G +H +G+ SV NAL+ Y K C
Sbjct: 147 DFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCS 206
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-------------- 328
+ +AR +F E+P+++ ++W MI+G N E++E M+
Sbjct: 207 AMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVH 266
Query: 329 -----------------GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN-- 369
G+ + T+ +++ CA+ G + +++ A + + + PN
Sbjct: 267 CGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK-NELNPNHS 325
Query: 370 --LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA-----E 422
L ++ + ++ V EA + +M +R N W ++LS G +E A E
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVR-NIITWNAILSGYVNAGRMEEAKSFFEE 384
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
VK L+ L SG A+ G D+ L MR
Sbjct: 385 MPVKNLLTLTVMISG--------LAQNGFGDEGLKLFKQMR 417
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 22/259 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+HA L H ++S+L + + +S+ ++ A +F M + ++ +NSMI A +
Sbjct: 446 QLHAQ-LVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQH 504
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSI 137
G + ++LF + G++PD TF +L AC G + G+ ++ S G
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDH 564
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHR------DVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+V+L+ G V D M + + ++ IHG G ++ LF+
Sbjct: 565 YARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLG-IEAAEQLFKL 623
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M + ++ L+ + GR +E ++ MRDQA + P C+ +++
Sbjct: 624 MPQND-GTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKE--------PACSW---IEVE 671
Query: 252 QWIHSYAESSGLYRKVVSV 270
+H + ++ +V+SV
Sbjct: 672 NKVHVFMVDDDVHPEVLSV 690
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/439 (36%), Positives = 249/439 (56%), Gaps = 5/439 (1%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
VS+ L + A +F M + +++ +N++I Y+ NG + + + F+ +L + P
Sbjct: 234 MVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAP 293
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
DE+T +L AC +G + +G+ VH I+RS G + ++ +Y G +++ V
Sbjct: 294 DEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVM 353
Query: 159 DE--MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+ M+ +VI ++ G+ K GD+ +F M R VV+W MI ++G + EA
Sbjct: 354 QQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEA 413
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF M E + TV AVL +CA L ++ G+ IH A S L + SV N++V
Sbjct: 414 MELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS-LQEQSSSVSNSIVT 472
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y + G L AR VF + RK V+W +MI LA +G GE V L+E+M+ GV P++
Sbjct: 473 MYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRI 532
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TFVGVL+ C H G V++ + F + H IVP + HY CMVD+L R+G EA + I+
Sbjct: 533 TFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQ 592
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+A WGSLLS+CR H + +LAE A ++L++++P NSG Y LSN+Y+ GRW+DA
Sbjct: 593 MPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDA 652
Query: 456 ETLRMWMRENNVKKSPGQS 474
+ ++ +VKK G S
Sbjct: 653 AKIWKRRKDKSVKKETGFS 671
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 180/410 (43%), Gaps = 45/410 (10%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F +M + + M+ + G E +K+F + G+ P ++T +L +C
Sbjct: 115 ARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAA 174
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
VG+ VH +++ G + V+ +Y CG + VF+ M R V N M
Sbjct: 175 TEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAM 234
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELD 231
+ G +D L LF M +R++VSWN +I+ ++G +++AL F M D
Sbjct: 235 VSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPD 294
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESS-------------GLYRKVVSVGN------ 272
E T+ +VL CA LG V IG+ +H+Y S +Y K SV N
Sbjct: 295 EFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQ 354
Query: 273 -------------ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
AL++ Y K G + AR +F + ++VV+W AMI G NG + +
Sbjct: 355 QAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAM 414
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL----FASMTGLHSIVPNLEHYGC 375
EL+ MI G PN T VL+ CA +E +++ S+ S V N
Sbjct: 415 ELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN-----S 469
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
+V + RSG + A + + R W S++ + HG L E AV
Sbjct: 470 IVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHG---LGEDAV 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 43/326 (13%)
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ-----MDDGMKVF 158
A LL+ C + G+ +H +++G + ++ Y + ++F
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 159 DEM--SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
DE+ + R+V N ++ + K G + +F EM ER VSW +M+ L + GR EA
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+++F +M + T+ VL CA A +G+ +HS+ GL V V N++++
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGL-SSCVPVANSVLN 205
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV------ 330
Y KCG +TAR VF+ +P ++V SWNAM+S A GR +L + L+E M + +
Sbjct: 206 MYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAV 265
Query: 331 --------------------------SPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
+P++ T VL+ CA+ G+V +++ A + L
Sbjct: 266 IAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYI--LR 323
Query: 365 SIVPNL-EHYGCMVDVLGRSGCVREA 389
S +P + + ++ + +SG V A
Sbjct: 324 SRMPYIGQVTNALISMYAKSGSVENA 349
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYSLN 78
QIH +R QS+ + V++ + +A ++F+++ + + SMI A + +
Sbjct: 450 QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQH 509
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
G E+ V LF + +G+ PD TF +L AC VG + G+
Sbjct: 510 GLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGK 551
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 277/478 (57%), Gaps = 13/478 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFL------RHKLHQSNLILAHFVSVCGTLNEIKYATKI 56
+ L LL + QIH H L + + +++LI + + C + A ++
Sbjct: 131 QTFLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGC-----FECARQL 185
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
F++M + +V+ +N+MI ++ G ++LF +++ G+ PD++T LL C +G+
Sbjct: 186 FDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGET 245
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
++G+ VH +I +S + ++++Y C ++ KVFD +D + N +I G+
Sbjct: 246 KLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGY 305
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K G+++ LF ++ R +VSWN +IS ++G LF M + + D+ T+V
Sbjct: 306 AKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIV 365
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++ A +GA+D G+WIH A L + G+AL+D YCKCG ++ A +F +IP
Sbjct: 366 NLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPE 424
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+V +W MI+G AF+G G +EL+ M A+ PN TFV VL C+H+GLV++ ++
Sbjct: 425 KDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACSHSGLVDEGLKI 483
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F+SM +SI P +EHYGC+VD+L RSG + +A +I M + P+ +IWG++LS+CR H
Sbjct: 484 FSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHR 543
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
++ELAE A+ EL+ LEP G Y+LLSN+YA GRW ++++R M VKK G S
Sbjct: 544 NMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCS 601
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 271/461 (58%), Gaps = 14/461 (3%)
Query: 25 FLRHKLHQSN----LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
F R KL ++ +I +H S L +++ F QM V+ +N+MI Y+ +G
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQ-----FEQMIERDVVSWNAMISGYNQHGF 257
Query: 81 SEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + +F+ +L + PD++T A L AC + +L++G+ +H IIR+ F+ FG++
Sbjct: 258 DREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN 317
Query: 140 GVVELYTSCGQMDDGMKVFDE--MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ +Y+ G ++ K+ ++ +S+ DVI ++ G+ K GD++ +F +R R V
Sbjct: 318 ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDV 377
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W MI ++G + +A+ LF M + + + T+ +L + + L ++D G+ IH+
Sbjct: 378 VAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHAS 437
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGE 316
A SG VSV NAL+ Y K G ++ AR VF I +++ ++W +MI LA +G GE
Sbjct: 438 ATRSG-NASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGE 496
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+E+M+ G+ P+ T+VGVL+ C H GLVE+ R + M H I+P HY CM
Sbjct: 497 EALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACM 556
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
+D+ GR+G ++EA+ I +M I P+ WGSLL+SC+ H +VELAE A + L+ +EP NS
Sbjct: 557 IDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENS 616
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G Y L+N+Y+ G+W++A +R M++ VKK G S ++
Sbjct: 617 GAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQ 657
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 195/416 (46%), Gaps = 38/416 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N+IL+ + G L E A ++F +M P + + +MI Y+ G E + +F + +
Sbjct: 83 NIILSGYAK-GGRLEE---AHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ P ++T +L +C V L +G+ VH +++ G + S+ ++ +Y G
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
VFD M + N MI + G VD F +M ER VVSWN MIS + G D
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFD 258
Query: 214 SEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHS---------------- 256
EAL +F +M D + + D+ T+ + L CA L + +G+ IH+
Sbjct: 259 REALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNA 318
Query: 257 ----YAESSG--LYRKVVSVG----------NALVDFYCKCGILDTARNVFKEIPRKNVV 300
Y++S G + +K++ AL+D Y K G ++ AR +F + ++VV
Sbjct: 319 LISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVV 378
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+W AMI G NG + +EL+ MI +G PN T +L+ + ++ R++ AS
Sbjct: 379 AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASA 438
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
T + ++ ++ + +SG + +A + + + + W S++ + HG
Sbjct: 439 TRSGN-ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHG 493
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 44/336 (13%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D YT L+ L D G+ +H II++G + ++ Y G + D +VF
Sbjct: 14 DPYT--SFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVF 71
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
DEM + V N+++ G+ K G +++ +F EM E VSW MI + G+ A+
Sbjct: 72 DEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIG 131
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
+F EM + T+ VL CA + + IG+ +HS+ GL +SV N+L++ Y
Sbjct: 132 MFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGL-SSYISVANSLLNMY 190
Query: 279 CK-------------------------------CGILDTARNVFKEIPRKNVVSWNAMIS 307
K G++D A+ F+++ ++VVSWNAMIS
Sbjct: 191 AKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMIS 250
Query: 308 GLAFNGRGELGVELYEQMIAKGVS-PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
G +G ++++ +M+ S P+K T L+ CA+ ++ +++ A H I
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHA-----HII 305
Query: 367 VPNLEHYG----CMVDVLGRSGCVREAYDLIRSMSI 398
+ +G ++ + +SG V A +I I
Sbjct: 306 RTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMI 341
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 152/376 (40%), Gaps = 67/376 (17%)
Query: 20 QIHAHFLRHKLHQ------------------------------SNLILAHFVSVCG---T 46
QIHAH +R + SNL + F ++
Sbjct: 299 QIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVK 358
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L +I A +IF+ +R V+ + +MI Y NG +++ ++LF + G P+ YT A +
Sbjct: 359 LGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATM 418
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L + L G+ +H RSG S+ ++ +Y G ++D VF+
Sbjct: 419 LSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFN------- 471
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+IH +R ++W MI +L + G EAL LF M +
Sbjct: 472 -----LIHW------------------KRDTITWTSMIIALAQHGLGEEALTLFERMLEN 508
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D T V VL C +G V+ G+ ++ +++ S ++D + + G+L
Sbjct: 509 GIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQE 568
Query: 287 ARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATFVGVLTCC 344
A + +P +V++W ++++ + EL E+++ + P N + +
Sbjct: 569 AHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLL--IEPENSGAYSALANVY 626
Query: 345 AHAGLVEKARELFASM 360
+ G E A + SM
Sbjct: 627 SACGQWENAANIRKSM 642
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 264/473 (55%), Gaps = 35/473 (7%)
Query: 8 LLHGRNTRTH-LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPS 64
LL + T H L QIHA + N + +S C ++ YA ++FN + P+
Sbjct: 31 LLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPN 90
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++N++I+A++ + E + L+ ++ L + P ++TF LLKAC L+ VH
Sbjct: 91 SFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHT 150
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+++ G + + G+V Y+ + + +VFDE+S
Sbjct: 151 HVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS---------------------- 188
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
ERS+ W MIS ++ +EAL LF +M + E + AT+ +VL CA+
Sbjct: 189 ---------ERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQ 239
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
G +D+G+ IH + E G+ V+ +G ALV Y K G + A+ +F I +N +WNA
Sbjct: 240 SGCLDLGERIHVFMEEKGIEVGVI-LGTALVHMYAKNGAILMAQKLFDTISERNTATWNA 298
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA +G + ++ + ++ + + PN TFVGVL+ C HAGL+ R++F M ++
Sbjct: 299 MICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVY 358
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +EHYGCMVD+LGR G + EA +LI+ M+ + + I G+LL SC+ HG++E+AE
Sbjct: 359 GIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERV 418
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VKE++ LEP N G YV+LSN+YAE GRW+D LR M+ N+KK+PG SL++
Sbjct: 419 VKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVD 471
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 253/463 (54%), Gaps = 43/463 (9%)
Query: 20 QIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
QIHAH ++ L SNL L F +V G + ++ K+F+Q + ++ + ++I+AY
Sbjct: 159 QIHAHSIKTGL-SSNLFVKNTLMRFYAVSGFIEAVE---KVFDQGPHWDLISWTTLIQAY 214
Query: 76 SLNG-PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
S G PSE F + D T +L AC +GD +G+ +
Sbjct: 215 SKMGYPSEAIAAFF----RMNCTADRMTLVVVLSACSQLGDFTLGKKI------------ 258
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
MD +FD H DV + N ++ + K G LF M
Sbjct: 259 -------------LAYMDH--HLFD--VHSDVFLGNALLDMYLKCGQPHLARQLFHLMPV 301
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+++VSWN MIS L G EAL +F M+ + D T+V VL CA LG +++G+W+
Sbjct: 302 KNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWV 361
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
HSY + + + + V NALVD Y KCG +D A VF+ + K+V S+ AMI G A +G+
Sbjct: 362 HSYIDKNHM-KADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGK 420
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ + ++ +M GV P+ T VGVL+ C+HAGL+E+ R F M+ L+ + P EHYG
Sbjct: 421 ADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYG 480
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGR+G + EA M I P+A++WGSLL +C+ H VEL E +++LI +EP
Sbjct: 481 CMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPE 540
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G Y+L+SNIY+ RW DA R M++NN+KK+PG S IE
Sbjct: 541 RDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIE 583
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 250/435 (57%), Gaps = 9/435 (2%)
Query: 50 IKYATKIFNQMR--NPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPL 106
++ A ++F+QM + +NSMI Y+ N +E + +F LL GI D +T +
Sbjct: 224 VEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSV 283
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC + LR G+ VH + + G + +VE+Y+ C + FD ++ RD
Sbjct: 284 LAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDT 343
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSGRDSEALRLFHE 222
N++I G+ ++ L ++M+ E +V +WN +IS ++G + ALRLF E
Sbjct: 344 ATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTE 403
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M+ + D TV +LP CARL + G+ +H+++ G Y V +G ALVD Y KCG
Sbjct: 404 MQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQG-YELDVHIGAALVDMYAKCG 462
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A V+ I N+VS NAM++ A +G G+ G+ L+ M+ G P+ TF+ VL+
Sbjct: 463 SIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 522
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C HAG VE E F MT +++ P+L+HY C+VD+L R+G + EAY+L++ + +P++
Sbjct: 523 SCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDS 581
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+WG+LL C G+VEL E A + LI LEP N+GNYVLL+N+YA GRW D + R +
Sbjct: 582 VMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMI 641
Query: 463 RENNVKKSPGQSLIE 477
++ + KSPG S IE
Sbjct: 642 KDRGMHKSPGCSWIE 656
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 195/440 (44%), Gaps = 67/440 (15%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HAH L+ H + + + G + A +F +M ++ + +++ + +G
Sbjct: 80 QVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHG 139
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE + LF L+ I + + F +LK C G+ L +G+ +HG +I+
Sbjct: 140 YFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIK----------- 188
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR--ERSV 197
C M +K+F S ++V+ N MI G+C+ G+V+K LF +M +
Sbjct: 189 -------RCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDT 241
Query: 198 VSWNLMISSLGKSGRDSEALRLFHE-MRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+SWN MIS + EAL +F + + ++ E D T+ +VL CA + ++ G+ +H+
Sbjct: 242 ISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHA 301
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF----- 311
A GL+ VG ALV+ Y KC L A+ F + ++ +WN +ISG A
Sbjct: 302 QAVVRGLHWNTF-VGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLE 360
Query: 312 ------------------------------NGRGELGVELYEQMIAKGVSPNKATFVGVL 341
NG EL + L+ +M + P+ T +L
Sbjct: 361 NIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIIL 420
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLE---HYG-CMVDVLGRSGCVREAYDLIRSMS 397
CA + + +++ A HSI E H G +VD+ + G ++ A + +S
Sbjct: 421 PACARLATIARGKQVHA-----HSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRIS 475
Query: 398 IRPNAAIWGSLLSSCRTHGH 417
PN ++L++ HGH
Sbjct: 476 -NPNLVSQNAMLTAYAMHGH 494
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 1/167 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HAH +R I A V + IK+A +++N++ NP+++ N+M+ AY+++G
Sbjct: 434 QVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG 493
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + LF + G PD TF +L +C+ G + G +
Sbjct: 494 HGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYT 553
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKG 185
+V+L + G++D+ ++ ++ + D ++ ++ G G+V+ G
Sbjct: 554 CIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELG 600
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 264/473 (55%), Gaps = 35/473 (7%)
Query: 8 LLHGRNTRTH-LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPS 64
LL + T H L QIHA + N + +S C ++ YA ++FN + P+
Sbjct: 33 LLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPN 92
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++N++I+A++ + E + L+ ++ L + P ++TF LLKAC L+ VH
Sbjct: 93 SFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHT 152
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+++ G + + G+V Y+ + + +VFDE+S
Sbjct: 153 HVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVS---------------------- 190
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
ERS+ W MIS ++ +EAL LF +M + E + AT+ +VL CA+
Sbjct: 191 ---------ERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQ 241
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
G +D+G+ IH + E G+ V+ +G ALV Y K G + A+ +F I +N +WNA
Sbjct: 242 SGCLDLGERIHVFMEEKGIEVGVI-LGTALVHMYAKNGAILMAQKLFDXISERNTATWNA 300
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI GLA +G + ++ + ++ + + PN TFVGVL+ C HAGL+ R++F M ++
Sbjct: 301 MICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVY 360
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +EHYGCMVD+LGR G + EA +LI+ M+ + + I G+LL SC+ HG++E+AE
Sbjct: 361 GIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERV 420
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VKE++ LEP N G YV+LSN+YAE GRW+D LR M+ N+KK+PG SL++
Sbjct: 421 VKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLVD 473
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 253/434 (58%), Gaps = 2/434 (0%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
L +IK A K+F++M V+ +N+M+ AY+ +G + ++ + L+ LGI +EY+FA
Sbjct: 128 AKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFA 187
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
LL C+ V +L + + HG+++ +GF I V++ Y C +M D ++FDEM R
Sbjct: 188 GLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIR 247
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ M+ G+ + GDV+ LF M E++ V+W +I+ + +AL LF +M
Sbjct: 248 DVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMM 307
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D+ T + L A + +++ G+ IH Y + + + V ++L+D Y KCG L
Sbjct: 308 ALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVV-SSLIDMYSKCGCL 366
Query: 285 DTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ R VF + K +VV WN +IS LA +GRG+ +++++ M+ G+ P++ T + +L
Sbjct: 367 EVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNA 426
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+GLV++ L+ S+T H ++PN EHY C++D+LGR+G + + M +PN
Sbjct: 427 CSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDE 486
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW +LL CR HG++E +++I L+P +S YVLLS+I+A GRW+ E +R M
Sbjct: 487 IWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMN 546
Query: 464 ENNVKKSPGQSLIE 477
E +V+K S IE
Sbjct: 547 ERHVRKDRAISWIE 560
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 179/388 (46%), Gaps = 34/388 (8%)
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G + + LL GI T A LL+ C L++G+ VH + +G +R
Sbjct: 26 SSQGQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPN 85
Query: 136 SIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ ++ +Y+ CG KVFDEMS R++ N M+ G+ K G + LF +M E
Sbjct: 86 TFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPE 145
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VVSWN M+ + KSG ++ALR + E+R +E + +L IC ++ +++ +
Sbjct: 146 KDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQA 205
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GI 283
H +G +V + ++++D Y KC G
Sbjct: 206 HGQVLVAGFLSNLV-ISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGD 264
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ AR +F +P KN V+W ++I+G A + G +EL+ +M+A + P++ TF L
Sbjct: 265 VEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCA 324
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
A + +++ + +I PN ++D+ + GC+ + M + +
Sbjct: 325 SASIASLNHGKQIHGYLIRT-NIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVV 383
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINL 431
+W +++SS HG + A +++ L
Sbjct: 384 LWNTIISSLAQHGRGQEAIQMFDDMVRL 411
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 257/466 (55%), Gaps = 39/466 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLI--LAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIK 73
L QIHA L H + S++ L + C +I YA K+F+Q++ P++ +NSMI+
Sbjct: 73 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 132
Query: 74 AYSLN-GPSEEPVKLFALLKNLGIW-PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
S + PS+EPV LF + G P+ +T A +LKAC V L GQ VH +++SGF
Sbjct: 133 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 192
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ +V Y C + KVFDE++ R+++ + MI G+ + G V++ L LFR+
Sbjct: 193 GSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRD 252
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M++ VV DE T+V+V+ CA GA+D G
Sbjct: 253 MQKAGVVP-------------------------------DEVTMVSVISACAASGALDTG 281
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+W+H+Y L + + ALV+ Y KCG ++ A+ VF +P K+ +W++MI GLA
Sbjct: 282 KWVHAYINKQ-LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAI 340
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
NG E +E + +M V PN TF+GVL+ CAH+GLV + R ++SM IVP++E
Sbjct: 341 NGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEF-GIVPSME 399
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
YGCMVD+L R+ V +A L+ +M I PN IW +LL C+ +++ +E + L+ L
Sbjct: 400 LYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLEL 459
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP N+ NY+LLSN+YA +W+ +R M+ +K PG S IE
Sbjct: 460 EPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIE 505
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 258/478 (53%), Gaps = 6/478 (1%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLR--HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
++R N + ++H+H L H Q + + + G + YA ++F M +
Sbjct: 66 LIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPS 125
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV--GQ 120
+V + + A+S NG E + F + G PD TF+ +L A +G + G+
Sbjct: 126 RNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGR 185
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H SG + V+ +Y CG++DD F+E+ ++ + N M+ + G
Sbjct: 186 EIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDG 245
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVL 239
+ L LFREM + V WN MI++ + GR +AL L+ M D + T V V+
Sbjct: 246 RDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVI 305
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+CA L A+ G+ IH+ ++ ++ V NALV Y KCG LD A +VF + K+
Sbjct: 306 DVCAELSALKQGRAIHARVRATNFDANLL-VSNALVHMYGKCGCLDEALDVFHSMKLKDE 364
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SWN +IS A++G + + LY++M +GV P + TFVG+L+ C+H GLV + F
Sbjct: 365 ISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYR 424
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M H I P++ H+GC++D+LGR G + EA +++SM I+ NA W SLL +C+THG ++
Sbjct: 425 MQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLK 484
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++++ PW SG YVLLSNIYA GRW D E +R M VKKSPG+S IE
Sbjct: 485 RGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 542
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES-SGLYRKVVSVGNALVDFYCKC 281
+ + ELD A++ C A+ + +HS+ S + + N L++ Y KC
Sbjct: 51 LESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKC 110
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G L AR +F+ +P +NV +W ++ + NG + + +M G P++ TF +L
Sbjct: 111 GRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVIL 170
Query: 342 --TCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
A +++ RE+ +A ++GL +PN+ ++ + G+ G + +A +
Sbjct: 171 AAIAQMGAAAIDQGREIHRYARISGL---LPNVVVGTAVISMYGKCGRLDDARAAFEELQ 227
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP--WNSGNYVLLSNIYAEGGRWDDA 455
+ N+ W +++++ + G A +E+ + + WN+ + YA+ GR A
Sbjct: 228 WK-NSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNA-----MIAAYAQHGRGKQA 281
Query: 456 ETLRMWMRENN 466
L M +
Sbjct: 282 LDLYRSMHDTT 292
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 248/457 (54%), Gaps = 36/457 (7%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F+QM + +N++I +S NG S + ++ F ++ G +YT +L AC + D
Sbjct: 111 VFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLD 170
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
++ G+ +HG I+ + + + +Y CG +D +FD M +++V+ N MI G
Sbjct: 171 IKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISG 230
Query: 176 FCKKGD-----------------------------------VDKGLYLFREMRERSVVSW 200
+ + G +D+ FRE++E+ V W
Sbjct: 231 YLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCW 290
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
M+ ++G++ +AL LF EM + D T+ +V+ CARL ++ GQ +H A
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVI 350
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G+ ++ V +ALVD Y KCG A VFK + +NV+SWN+MI G A NG+ +
Sbjct: 351 FGVDHDLL-VSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALA 409
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
LYE+M+ + + P+ TFVGVL+ C HAGLVE+ + F S++ +H + P +HY CM+++L
Sbjct: 410 LYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLL 469
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+G + +A DLI+SM+ PN IW +LLS CR + V E A + L L+P N+G Y+
Sbjct: 470 GRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYI 529
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LSNIYA GRW D +R M+ N +KK S IE
Sbjct: 530 MLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIE 566
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 145/275 (52%), Gaps = 9/275 (3%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G + D +FD+MS RDV N M+ + K G+V+ +F +M VS+
Sbjct: 64 LLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSY 123
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N +I+ +G S+AL F M+++ FE + T V+VL C++L + G+ IH +
Sbjct: 124 NTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVA 183
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ L V V NAL + Y KCG LD AR +F + KNVVSWN+MISG NG+ E +
Sbjct: 184 TSLGESVF-VWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTK 242
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ +M + G+ P++ T +L+ G +++A + F + + GC
Sbjct: 243 LFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC----- 297
Query: 381 GRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSC 412
++G +A L R M ++RP+ S++SSC
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSC 332
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
SN++ A+F CG ++E A K F +++ + + +M+ + NG E+ + LF +
Sbjct: 260 SNILSAYFQ--CGYIDE---ACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREML 314
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+ PD +T + ++ +C + L GQ VHG+ + G + + +V++Y+ CG+
Sbjct: 315 LENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETA 374
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
D VF M R+VI N MI G+ ++G+
Sbjct: 375 DAWIVFKRMLTRNVISWNSMILGY-------------------------------AQNGK 403
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVG 271
D EAL L+ EM + + D T V VL C G V+ GQ + +S ++ G+
Sbjct: 404 DLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGM-NPTFDHY 462
Query: 272 NALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFN 312
+ +++ + G +D A ++ K + N + W+ ++S N
Sbjct: 463 SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRIN 504
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS------------------------ 307
N L+ Y K G L AR++F ++ R++V SWNAM+S
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121
Query: 308 -------GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
G + NG +E + +M +G T V VL C+ +++ +++ +
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
S+ ++ + + ++ + G + +A L M + N W S++S +G E
Sbjct: 182 VAT-SLGESVFVWNALTNMYAKCGALDQARWLFDRM-VNKNVVSWNSMISGYLQNGQPET 239
Query: 421 AEHAVKELIN--LEPWNSGNYVLLSNI---YAEGGRWDDA-ETLR 459
E+ + L P + V +SNI Y + G D+A +T R
Sbjct: 240 CTKLFCEMQSSGLMP----DQVTISNILSAYFQCGYIDEACKTFR 280
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 267/481 (55%), Gaps = 6/481 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFN 58
+ + ++ LL G + L +IHA + Q I + + S ++ Y+ K+
Sbjct: 12 LNQTLISLLDGCKSMFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLIL 71
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ NP+ +N++I+A+S + +F + G+ PD T+ L+KA + + +
Sbjct: 72 NVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSPDYLTYPFLVKATSKLLNQEL 131
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G VH I++SG E I+ ++ +Y SC + KVFDEM ++++ N M+ G+ K
Sbjct: 132 GMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAK 191
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
GD++ +F M E+ VVSW+ +I K EA+ LF M +E T+V+
Sbjct: 192 CGDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSA 251
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK--EIPR 296
L CA LGA++ G+ +H Y + L +V + +LVD Y KCG + A VF+ +
Sbjct: 252 LCACAHLGALEHGRMMHRYIVENELPLTIV-LQTSLVDMYAKCGAIHEALTVFRACSLQE 310
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+V+ WNA+I GLA +G + + L+ +M G+ P++ T++ +L+CCAH GLVE+A
Sbjct: 311 ADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYF 370
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F + H ++P +EHY CMVD L R+G V EAY + M ++P +++ G+LLS C HG
Sbjct: 371 FDCLRK-HGMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHG 429
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+++A+ + L+ L+P + G YV LSNIYA RWDDA+ +R M VKKSPG S I
Sbjct: 430 KLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFI 489
Query: 477 E 477
E
Sbjct: 490 E 490
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 175/477 (36%), Positives = 256/477 (53%), Gaps = 34/477 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLN--EIKYATKIFNQMR 61
+LRL + QIHA LR + S+ +LA H + L ++YA + +++
Sbjct: 18 LLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLL 77
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
L + + S P L + PD +T+ PL++AC + LR G+C
Sbjct: 78 PHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLALPDTHTYPPLIQACARLLALREGEC 137
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H E ++GF ++ +V LY +CG + KVFDEM
Sbjct: 138 LHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP------------------- 178
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+R R++VSWN M++S +GR +E L +F EM F D T+V+VL
Sbjct: 179 ----------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTA 228
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR-KNVV 300
CA GA+ +G+ +H Y E GL V NAL+D Y KCG ++ AR +F+E+ + VV
Sbjct: 229 CAEFGALALGRRVHVYVEKVGLVENS-HVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 287
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW ++I GLA NG G+ +EL+ M + + P + T VGVL C+H GLV+ F M
Sbjct: 288 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 347
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EH GCMVD+LGR+G V EAYD I +M + PNA +W +LL SC H +EL
Sbjct: 348 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL 407
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ A + L+ L+P +SG+YVLLSN+YA G W D LR M ++ V+K+PG SL+E
Sbjct: 408 GKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVE 464
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 251/466 (53%), Gaps = 39/466 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLI--LAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIK 73
L Q+HAH L L S+ L+ V+ C I YA +F Q+ +P++ +NS+IK
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIK 63
Query: 74 AYS-LNGPSEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
YS ++ S+EP+ LF L G P+ +T A +LKAC V G VH +++ GF
Sbjct: 64 GYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGF 123
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ +V Y C ++ KVF+EM VRNL
Sbjct: 124 GSSLFVQTSLVNFYGKCEEIGFARKVFEEMP-----VRNL-------------------- 158
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
V+W MIS + G EA+ LF EM+ + D T+V+V+ CA GA+DIG
Sbjct: 159 ------VAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIG 212
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
W+H+Y E + + + ALVD Y KCG ++ A+ VF +P K+ +W++MI G A+
Sbjct: 213 YWLHAYIEKYFVLTDL-ELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAY 271
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G + ++ ++QM+ V+P+ TF+ VL+ CAH GLV + R ++ M I P++E
Sbjct: 272 HGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEF-GIEPSVE 330
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYGC VD+L RSG V EAY + +M I PNAA W SLL C+ + L E + L+ L
Sbjct: 331 HYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLEL 390
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP N+ NY+++SN+Y+ +W+ LR M+E +K PG S IE
Sbjct: 391 EPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIE 436
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 252/434 (58%), Gaps = 5/434 (1%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N++ A + N + +N+MI Y+ G E ++F + I DE+TF ++
Sbjct: 237 NDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVI 296
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV----VELYTSCGQMDDGMKVFDEMSH 163
C G R+G+ +H +++ + + V + Y CG++D ++F++M
Sbjct: 297 SVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPE 356
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD++ N+++ G+ +D+ F EM E++++SW +MIS L + G EAL+ F+ M
Sbjct: 357 RDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRM 416
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ Q FE + + C+ LG++ G+ +H+ G Y +S GNAL+ Y +CG+
Sbjct: 417 KLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYG-YESSLSAGNALITMYARCGV 475
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+D A +F +P + +SWNAMI+ L +G+G +EL+E+M+ +G+ P++ +F+ V++
Sbjct: 476 VDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISA 535
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAGLV++ R+ F SM ++ + P+ EHY ++D+L R+G EA +++ SM P A
Sbjct: 536 CSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAP 595
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW +LL+ CR HG+++L A + L L+P + G YVLLSN+YA G+W+D +R MR
Sbjct: 596 IWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMR 655
Query: 464 ENNVKKSPGQSLIE 477
+ VKK PG S IE
Sbjct: 656 DRGVKKEPGCSWIE 669
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 208/461 (45%), Gaps = 57/461 (12%)
Query: 22 HAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQ----MRNPSVLLFNSMIKAYS 76
+A +L ++ Q +++ ++ ++K + KIF+ MR+ + +N+MI AYS
Sbjct: 66 YARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDS--VFYNAMITAYS 123
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL-RVGQCVHGEIIRSGFERFG 135
N ++LF ++ PD YTF +L A V + + Q +H +++SG
Sbjct: 124 HNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVT 183
Query: 136 SIRIGVVELYTSCGQ---------MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
S+ ++ Y C M + K+FDEM +RD + +I G+ K D+D
Sbjct: 184 SVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAK 243
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
++ V+WN MIS G EA +F +M +LDE T +V+ +CA G
Sbjct: 244 EFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAG 303
Query: 247 AVDIGQWIHSY---AESSGLYRKVVSVGNALVDFYCKCG--------------------- 282
+G+ +H+Y ++ + V NAL+ FY KCG
Sbjct: 304 CFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWN 363
Query: 283 ----------ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+D A++ F E+P KN++SW MISGLA G E ++ + +M +G P
Sbjct: 364 IILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEP 423
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
F G + C+ G ++ R+L A + + +L ++ + R G V A+ L
Sbjct: 424 CDYAFAGAIISCSVLGSLKHGRQLHAQVV-RYGYESSLSAGNALITMYARCGVVDAAHCL 482
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH----VELAEHAVKELI 429
+M +A W +++++ HG +EL E +KE I
Sbjct: 483 FINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGI 522
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 34/368 (9%)
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VH +I SGF+ G I ++++Y+ +++ +FDE+ D++ R +I + GD
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 182 VDKGLYLFRE--MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ +F + + R V +N MI++ + A+ LF +M+ F D T +VL
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVL 154
Query: 240 PICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKC---------GILDTARN 289
A + + Q +H SG V SV NAL+ Y KC ++ AR
Sbjct: 155 GALALVAEKEKHCQQLHCAVVKSGT-GFVTSVLNALISSYVKCAASPSAQSSSLMAEARK 213
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAG 348
+F E+P ++ +SW +I+G N + E K GV+ N +++ AH G
Sbjct: 214 LFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWN-----AMISGYAHRG 268
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR-----EAYDLIRSMSIRPNAA 403
L +A E+F M + I + + ++ V +GC R AY L + P+ A
Sbjct: 269 LYLEAFEMFRKMI-MSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVA 327
Query: 404 --IWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
+ +L++ G V++A+ ++ +L WN ++LS Y D+A++
Sbjct: 328 MPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWN----IILSG-YVNVRCMDEAKSFF 382
Query: 460 MWMRENNV 467
M E N+
Sbjct: 383 NEMPEKNI 390
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 261/439 (59%), Gaps = 12/439 (2%)
Query: 50 IKYATKIFN-QMRNPSVLLFNSMIKA--YSLNGPSE-EPVKLFALLKNLGIWPDEYTFAP 105
I YA IF+ + ++N +I+A ++++ P P+ ++ +++ + PD +TF
Sbjct: 7 ISYANPIFHIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPF 66
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL + L +GQ H +I+ G ++ +R ++ +Y+SCG + +++FDE +D
Sbjct: 67 LLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKD 126
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR- 224
+ N +++ + K G ++ LF EM ER+V+SW+ +I+ G+ EAL LF EM+
Sbjct: 127 LPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 186
Query: 225 ---DQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
++ F ++ T+ VL C RLGA++ G+W+HSY + G+ +V +G AL+D Y K
Sbjct: 187 PKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIV-LGTALIDMYAK 245
Query: 281 CGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFV 338
CG L+ A+ VF + +K+V +++AMI LA G + +++ +M + ++PN TFV
Sbjct: 246 CGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFV 305
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
G+L C H GL+ K + F MT I P+++HYGCMVD+ GRSG ++EA I SM +
Sbjct: 306 GILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 365
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+ IWGSLLS R G ++ E A+K LI L+P NSG YVLLSN+YA+ GRW + + +
Sbjct: 366 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRI 425
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M +KK PG S +E
Sbjct: 426 RHEMEVKGIKKVPGCSYVE 444
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 261/472 (55%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
RN+ + +H + Q + +++ L+ + A K+F++ R ++ ++N++
Sbjct: 82 RNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNAL 141
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLRVGQCVHGEII 127
+A +L G + ++L+ + +G+ D +T+ LLKAC+ V L+ G+ +H I+
Sbjct: 142 FRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHIL 201
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R G+ + ++++Y G + VFDEM V+N
Sbjct: 202 RHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMP-----VKN----------------- 239
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE--LDEATVVAVLPICARL 245
VVSW+ MI+ K+G+ EAL LF EM + + T+V+VL CA
Sbjct: 240 ---------VVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAF 290
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ IH+Y GL ++ V +AL+ Y +CG L++ + +F + +K+VV WN++
Sbjct: 291 AALEQGKLIHAYILRRGL-DSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSL 349
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G ++++E+MI G SP+ +F+ VL C+H GLVE+ ++LF SM H
Sbjct: 350 ISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHG 409
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P++EHY CMVD+LGR+ + EA +I + I P +WGSLL +CR H HVELAE A
Sbjct: 410 IQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERAS 469
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L LEP N+GNYVLL++IYAE WD+ + ++ + ++K PG+S IE
Sbjct: 470 KRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIE 521
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 42/264 (15%)
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N +I CK+G++ + LYL + + L+I S + S+AL + + D F+
Sbjct: 42 NHLIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFD 101
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
D P A L++ + + +D AR
Sbjct: 102 QD--------PFLA----------------------------TKLINMFSELDTVDNARK 125
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA-- 347
VF + ++ + WNA+ LA GRG +ELY +M GVS ++ T+ +L C +
Sbjct: 126 VFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASEC 185
Query: 348 --GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
++K +E+ A + H ++ ++D+ R GCV A + M ++ N W
Sbjct: 186 LVSFLQKGKEIHAHILR-HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK-NVVSW 243
Query: 406 GSLLSSCRTHGHVELAEHAVKELI 429
++++ +G A +E++
Sbjct: 244 SAMIACYAKNGKPYEALELFREMM 267
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 4/417 (0%)
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
N ++ +N+MI Y G +E +++ + + GI DE+T+ +++AC L++G+
Sbjct: 248 NMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ 307
Query: 122 VHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH ++R E F +V LY CG+ ++ +F++M +D++ N ++ G+ G
Sbjct: 308 VHAYVLRR--EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ + +F+EM+E++++SW +MIS L ++G E L+LF M+ + FE + +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA GQ H+ G + +S GNAL+ Y KCG+++ A+ VF+ +P + V
Sbjct: 426 SCAVLGAYCNGQQFHAQLVKIG-FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNA+I+ L +G G V++YE+M+ KG+ P++ TF+ VLT C+HAGLV++ R+ F SM
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSM 544
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++ I P +HY ++D+L RSG EA +I S+ +P A IW +LLS CR HG++EL
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +L L P + G Y+LLSN+YA G+W++ +R MR+ VKK S IE
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 242/572 (42%), Gaps = 143/572 (25%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
++ R +HG N T Q HAH IL + V +E+ YA ++F+++ P
Sbjct: 31 QLARAVHG-NIITFGFQPHAH-----------ILNRLIDVYCKSSELDYARQLFDEISEP 78
Query: 64 S---------------------------------VLLFNSMIKAYSLNGPSEEPVKLFAL 90
+++N+MI +S N + LF
Sbjct: 79 DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 91 LKNLGIWPDEYTFAPLLKA-CLGVGDLRVGQCV--HGEIIRSGFERFGSIRIGVVELYTS 147
+K+ G PD++T+A +L L V D + QCV H ++SG S+ +V +Y+
Sbjct: 139 MKHEGFKPDDFTYASVLAGLALVVDDEK--QCVQFHAAALKSGAGYVTSVSNALVSVYSR 196
Query: 148 CGQ----MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER-SVVSWNL 202
C + KVFD++ +D M+ G+ K G D G L + M E +V++N
Sbjct: 197 CASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNA 256
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
MIS G EAL + M ELDE T +V+ CA + +G+ +H+Y
Sbjct: 257 MISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYV---- 312
Query: 263 LYRKVVS--VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA---------------- 304
L R+ S N+LV Y KCG + AR +F+++P K++VSWNA
Sbjct: 313 LRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 305 ---------------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA---- 345
MISGLA NG GE G++L+ M +G P F G + CA
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 346 -------HA------------------------GLVEKARELFASMTGLHSIVPNLEHYG 374
HA G+VE+A+++F +M L S+ N
Sbjct: 433 YCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWN----- 487
Query: 375 CMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
++ LG+ G EA D+ M IRP+ + ++L++C H L + K ++
Sbjct: 488 ALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC---SHAGLVDQGRKYFNSM 544
Query: 432 E-----PWNSGNYVLLSNIYAEGGRWDDAETL 458
E P + +Y L ++ G++ +AE++
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESI 576
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 103 FAPLLKACLGV--GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+A L+ CL + L++ + VHG II GF+ I ++++Y ++D ++FDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE--MRERSVVSWNLMISSLGKSGRDSEALR 218
+S D I R M+ G+C GD+ +F E + R V +N MI+ + A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI--HSYAESSGLYRKVVSVGNALVD 276
LF +M+ + F+ D+ T +VL A L D Q + H+ A SG V SV NALV
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLA-LVVDDEKQCVQFHAAALKSGA-GYVTSVSNALVS 192
Query: 277 FYCKCG----ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE--------- 323
Y +C +L +AR VF +IP K+ SW M++G NG +LG EL +
Sbjct: 193 VYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLV 252
Query: 324 -----------------------QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+M++ G+ ++ T+ V+ CA+A L++ +++ A +
Sbjct: 253 AYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYV 312
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ +V + + G EA + M + + W +LLS + GH+
Sbjct: 313 LRREDFSFHFDN--SLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGE 369
Query: 421 AEHAVKEL 428
A+ KE+
Sbjct: 370 AKLIFKEM 377
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 255/461 (55%), Gaps = 38/461 (8%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H + I L + S CG L A K+F++M N SV+ + +MI AY+
Sbjct: 158 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVS---ARKVFDKMVNKSVVSWATMIGAYA 214
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
E +KLF ++ + P+E T +L AC DL + VH I +G
Sbjct: 215 QWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTV 274
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG C D LF +M E++
Sbjct: 275 LTSALMDVYCKCG---------------------------CYPLARD----LFNKMPEKN 303
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+ WN+MI+ + EAL LF+EM+ + D+ T+ ++L C LGA+++G+W+H
Sbjct: 304 LFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHV 363
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y E + V ++G ALVD Y KCG +++A VF+E+P K+V++W A+I GLA G+G
Sbjct: 364 YIEKEKIEVDV-ALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGL 422
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL+ +M V P+ TFVGVL C+HAGLV + F SM + I P++EHYGCM
Sbjct: 423 KALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCM 482
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EA DLI++M + P+ + LLS+CR HG++ +AE A ++LI L+P N
Sbjct: 483 VDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNG 542
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G YVLLSNIY+ W+ A+ +R M E N+KK PG S IE
Sbjct: 543 GTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIE 583
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 186/399 (46%), Gaps = 39/399 (9%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMRNPSVLLFNS 70
T + L QIHA LR L + V+ C + + YA +FNQ+ NP+ NS
Sbjct: 51 TTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNS 110
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+I+ Y+ + + + L+ G+ PD +TF L K+C G L G+ +H + G
Sbjct: 111 IIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLG 167
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F I+ ++ +Y++CG + KVFD+M ++
Sbjct: 168 FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK-------------------------- 201
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
SVVSW MI + + EA++LF M + + +E T+V VL CAR ++
Sbjct: 202 -----SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLET 256
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
+ +H Y + +G+ V + +AL+D YCKCG AR++F ++P KN+ WN MI+G
Sbjct: 257 AKQVHKYIDETGIGFHTV-LTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHV 315
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+ E + L+ +M GV +K T +L C H G +E + L + I ++
Sbjct: 316 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK-EKIEVDV 374
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+VD+ + G + A + + M + + W +L+
Sbjct: 375 ALGTALVDMYAKCGSIESAMRVFQEMPEK-DVMTWTALI 412
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 257/466 (55%), Gaps = 42/466 (9%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAY 75
L QIHA ++ Q+ ++ + C ++ YA +F ++ +P +FN+MI+ +
Sbjct: 4 LKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRGF 63
Query: 76 SLNGPSEEPVKLFALLKNL---GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
G + +P K F K + G+ D +TF+ LLK C +G + +G+ +H ++ G
Sbjct: 64 ---GKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGLN 120
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
SH V VRN ++H + D++ LF E+
Sbjct: 121 -----------------------------SH--VFVRNTLVHMYGTFKDIEASRQLFEEI 149
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+V+WN++I G+ +EAL +F M E DEAT V +L C+ LGA+D G+
Sbjct: 150 PNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSALGALDFGR 209
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
W+HS + G + + V N+L+D Y KCG L A +F + +KN V+WN MI GLA +
Sbjct: 210 WVHSCISNIG-HGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTMILGLASH 268
Query: 313 GRGELGVELYEQMIAKGV-SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G + L+ M+ + + +P+ TF+ VL+ C+H G+V+K F M + I P ++
Sbjct: 269 GYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIK 328
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYGCMVD+LGR+G V EAY LI +M ++ NA +W +LL++CR HG+VEL + K+L+ L
Sbjct: 329 HYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLEL 388
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SPGQSLI 476
EP +S +YVLL+N YA GRW++A +R M + V+K PG S++
Sbjct: 389 EPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 258/444 (58%), Gaps = 13/444 (2%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +L FV +I A + F+ M V+ +N++I Y+ +G +E +LF +
Sbjct: 223 NCLLGGFVKK----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----D 274
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
D +T+ ++ + + + + ++ + ++ G Y +M+
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG----YVQGERMEM 330
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++FD M R+V N MI G+ + G + + LF +M +R VSW MI+ +SG
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EALRLF +M + L+ ++ + L CA + A+++G+ +H G Y VGNA
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCFVGNA 449
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+ YCKCG ++ A ++FKE+ K++VSWN MI+G + +G GE+ + +E M +G+ P+
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
AT V VL+ C+H GLV+K R+ F +MT + ++PN +HY CMVD+LGR+G + +A++L+
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
++M P+AAIWG+LL + R HG+ ELAE A ++ +EP NSG YVLLSN+YA GRW
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
D LR+ MR+ VKK PG S IE
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWIE 653
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 176/406 (43%), Gaps = 54/406 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E + A K+F++M ++ +N MIK Y N +NLG + + P
Sbjct: 110 EFELARKLFDEMPERDLVSWNVMIKGYVRN-------------RNLGKARELFEIMPERD 156
Query: 109 ACLGVGDLRVGQCVHG--EIIRSGFERFGSIRI----GVVELYTSCGQMDDGMKVFDEMS 162
C + G +G + RS F+R ++ Y +M++ +F
Sbjct: 157 VC-SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
+ ++ N ++ GF KK + + F M R VVSWN +I+ +SG+ EA +LF E
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 223 --------------------MRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESS 261
M ++A EL D+ + A L G+ + E
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 262 GLYR-KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ + VS N ++ Y +CG + A+N+F ++P+++ VSW AMI+G + +G +
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD-- 378
L+ QM +G N+++F L+ CA +E ++L +V GC V
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNA 449
Query: 379 ---VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + G + EA DL + M+ + + W ++++ HG E+A
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 33/325 (10%)
Query: 116 LRVGQCVHGEIIRSGFERFGSIRI-GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+R G+C + R+ S+ G++ Y G+ + K+FDEM RD++ N+MI
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD--------- 225
G+ + ++ K LF M ER V SWN M+S ++G +A +F M +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 226 -----QAFELDEATVV--------AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
Q +++EA ++ V C G V + + + + + V N
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
++ Y + G +D AR +F E P ++V +W AM+SG N E EL+++M +
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---- 310
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ ++ +L +E A+ELF M N+ + M+ + G + EA +L
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMP-----CRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH 417
M R + W ++++ GH
Sbjct: 366 FDKMPKR-DPVSWAAMIAGYSQSGH 389
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 78/346 (22%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y G+ ++ ++VF M + N MI G+ + G+ + LF EM ER +VSW
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N+MI ++ +A LF M ++ D+ W
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPER----------------------DVCSW------- 160
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
N ++ Y + G +D AR+VF +P KN VSWNA++S N + E
Sbjct: 161 -----------NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 321 LYEQ-----------MIAKGVSPNK----------------ATFVGVLTCCAHAGLVEKA 353
L++ ++ V K ++ ++T A +G +++A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
R+LF S V ++ + MV ++ V EA +L M R N W ++L+
Sbjct: 270 RQLFD-----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYV 323
Query: 414 THGHVELAEHAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETL 458
+E+A KEL ++ P N + + YA+ G+ +A+ L
Sbjct: 324 QGERMEMA----KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N + Y + G + A VFK +PR + VS+N MISG NG EL +L+++M + +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE--HYGCMVDVLGRSGCVREA 389
G + + KARELF I+P + + M+ ++GCV +A
Sbjct: 128 SWNVMIKGYV----RNRNLGKARELF-------EIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWN 435
+ M + N W +LLS+ + +E A K N L WN
Sbjct: 177 RSVFDRMPEK-NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN 223
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 273/542 (50%), Gaps = 74/542 (13%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + L QIHA L L S ++ + + +I +A ++F+ + P V
Sbjct: 27 LIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFP 86
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I+ YS N ++ + +++ ++ + PD +TF LLKAC G+ L++G+ VH ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146
Query: 128 RSGFE-----------------RFGSIRI----------------GVVELYTSCGQMDDG 154
R GFE R G R +V Y G+ +
Sbjct: 147 RLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEA 206
Query: 155 MKVFDEMSHRDV-------------------IVRNLMIHG-------------------- 175
+++F +M DV + + IH
Sbjct: 207 LEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM 266
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G V LF +M+ +++ WN MIS K+G +A+ LFHEM ++ D ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISI 326
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ + CA++G+++ +W+ Y S YR V + +AL+D + KCG ++ AR+VF
Sbjct: 327 TSAISACAQVGSLEQARWMDEYVSRSD-YRDDVFISSALIDMFAKCGSVECARSVFDRTL 385
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++VV W+AMI G +G+ + LY M GV PN TF+G+L C H+G+V +
Sbjct: 386 DRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWW 445
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +HY C++D+LGR+G + +AY++I+ M ++P +WG+LLS+C+ H
Sbjct: 446 FFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
HVEL ++A ++L +++P N+G+YV LSN+YA WD +R+ M+E + K G S
Sbjct: 505 RHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 476 IE 477
+E
Sbjct: 565 VE 566
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 272/540 (50%), Gaps = 72/540 (13%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + HL QIH + L + ++ V+ L +I YA K+F++ P V +
Sbjct: 62 LIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFM 121
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I++YS N + V+++ ++ G+ PD +TF +LKAC + D + +HG+II
Sbjct: 122 WNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQII 181
Query: 128 RSGFERFGSIRIGVVELYTSC-------------------------------GQMDDGMK 156
+ GF ++ G+V LY C G+ + ++
Sbjct: 182 KYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241
Query: 157 VFDEMSHRDV---------IVRNLM----------IHGF--------------------C 177
+F +M + V I+R IHGF
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYA 301
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
K G V F +M+ +V+ WN MIS K+G EA+ LFH M + + D TV +
Sbjct: 302 KCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRS 361
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+ A++G++++ QW+ Y S Y + V +L+D Y KCG ++ AR VF K
Sbjct: 362 AVLASAQVGSLELAQWMDDYVSKSN-YGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDK 420
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+VV W+AMI G +G+G + LY M GV PN TF+G+LT C H+GLV++ ELF
Sbjct: 421 DVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELF 480
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
M IVP EHY C+VD+LGR+G + EA I + I P ++WG+LLS+C+ +
Sbjct: 481 HCMKDF-EIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRC 539
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V L E+A +L +L+P+N+G+YV LSN+YA WD +R+ MRE + K G S+IE
Sbjct: 540 VTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIE 599
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 280/542 (51%), Gaps = 70/542 (12%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIFNQ 59
+ IL L + L Q+H ++ + ++ + L+ + C T E + YA +F
Sbjct: 7 KPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ PSV ++NSMI+ YS N P+ + +F +L+ G PD +TF +LKAC G+ D++
Sbjct: 67 IDCPSVYIWNSMIRGYS-NSPNPDKALIFYQEMLRK-GYSPDYFTFPYVLKACSGLRDIQ 124
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD------------------------- 152
G CVHG ++++GFE + ++ +Y CG+++
Sbjct: 125 FGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV 184
Query: 153 ------DGMKVFDEMSHR------------------------------DVIVRNLMIHGF 176
D ++ F EM +VI+ +I +
Sbjct: 185 NNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATSLIDMY 244
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K GD+ YLF M ER++VSWN +I+ ++G EAL +F +M D D+ T +
Sbjct: 245 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 304
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+V+ G +GQ IH+Y +G + K ++ ALV+ Y K G ++A+ F+++ +
Sbjct: 305 SVIRASMIQGCSQLGQSIHAYVSKTG-FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 363
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARE 355
K+ ++W +I GLA +G G + ++++M KG +P+ T++GVL C+H GLVE+ +
Sbjct: 364 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 423
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
FA M LH + P +EHYGCMVD+L R+G EA L+++M ++PN IWG+LL+ C H
Sbjct: 424 YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 483
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
++EL + + E SG YVLLSNIYA+ GRW D + +R M+ V K G S
Sbjct: 484 ENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSS 543
Query: 476 IE 477
+E
Sbjct: 544 VE 545
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 241/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+MI Y+ G +E ++LF + I PDE T ++ A
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++ +F+ + ++D
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKD---- 331
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+SWN +I EAL LF EM
Sbjct: 332 ---------------------------VISWNTLIGGYTHMNLYKEALLLFQEMLRSGER 364
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA+DIG+WIH Y + +++ S NA L+D Y KCG
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYID-----KRLKSATNASSLRTSLIDMYAKCGD 419
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF I K++ SWNAMI G A +GR + +++ +M G+ P+ TFVG+L+
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSA 479
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+ +G+++ R +F +MT + I P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 480 CSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGV 539
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ G+VEL E + LI +EP N G YVLLSNIYA GRW++ +R +
Sbjct: 540 IWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLN 599
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 600 DKGMKKVPGCSSIE 613
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 236/461 (51%), Gaps = 39/461 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + +C + + YA +F ++
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ +KL+ + +LG+ P+ YTF LLK+C + GQ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G++ + ++ +Y G+++D KVFD HRDV+ +I G+ +G +
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ LF E+ + VVSWN MIS ++G EAL LF EM DE+T+V V+ C
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ G++++G+ +HS+ + G + + + N+L+D Y KCG L+TA +F+ + K+V+SW
Sbjct: 277 AQSGSIELGRQVHSWIDDHG-FGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISW 335
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR-------- 354
N +I G + + L+++M+ G PN T + +L CAH G ++ R
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 355 ----------------ELFA---SMTGLHSIVPNLEH-----YGCMVDVLGRSGCVREAY 390
+++A + H + ++ H + M+ G A+
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455
Query: 391 DL---IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
D+ +R + I P+ + LLS+C G ++L H + +
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 256/439 (58%), Gaps = 12/439 (2%)
Query: 50 IKYATKIFN-QMRNPSVLLFNSMIKAYSLNGPSEE---PVKLFALLKNLGIWPDEYTFAP 105
I YA IF+ + L+N +I+A N S + P+ ++ ++N + PD +TF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL + L +GQ H +I+ G ++ +R ++ +Y+SCG + +VFD+ +D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR- 224
+ N +++ + K G +D LF EM ER+V+SW+ +I+ G+ EAL LF EM+
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 225 ---DQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
++AF +E T+ VL C RLGA++ G+W+H+Y + + +V +G AL+D Y K
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIV-LGTALIDMYAK 246
Query: 281 CGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFV 338
CG L+ A+ VF + +K+V +++AMI LA G + +L+ +M + ++PN TFV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
G+L C H GL+ + + F M I P+++HYGCMVD+ GRSG ++EA I SM +
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+ IWGSLLS R G ++ E A+K LI L+P NSG YVLLSN+YA+ GRW + + +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M + K PG S +E
Sbjct: 427 RHEMEVKGINKVPGCSYVE 445
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 273/482 (56%), Gaps = 39/482 (8%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E IL H +N+ ++H H L + Q + +++ + I A K+F++ R
Sbjct: 74 ELLILSCTH-QNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTR 132
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLR 117
N ++ ++N++ +A SL G EE + ++ + ++GI D +T+ +LKAC+ V L
Sbjct: 133 NRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLN 192
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ +H I+R G++ + I +V++Y G + + VF++M V+N
Sbjct: 193 KGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMP-----VKN------- 240
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL--DEATV 235
VVSW+ MI+ K+G+ EAL LF E+ + +L + T+
Sbjct: 241 -------------------VVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTM 281
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+VL CA L A++ G+ IH Y GL ++ V +ALV Y +CG L+ + VF ++
Sbjct: 282 VSVLQACAALAALEQGRLIHGYILRKGL-DSILPVISALVTMYARCGKLELGQRVFDQMD 340
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+++VVSWN++IS +G G+ + ++E+M GV P+ +FV VL C+HAGLV++ +
Sbjct: 341 KRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKM 400
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
LF SM H I P++EHY CMVD+LGR+ + EA +I +M I P +WGSLL SCR H
Sbjct: 401 LFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIH 460
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
+VELAE A L +LEP N+GNYVLL++IYAE G WD + ++ + ++K PG+S
Sbjct: 461 CNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSW 520
Query: 476 IE 477
IE
Sbjct: 521 IE 522
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 157/356 (44%), Gaps = 48/356 (13%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N +I++ G + ++L +L N P ++T+ L+ +C L Q VH ++
Sbjct: 43 NKLIQSLCKQGNLTQALELLSLEPN----PAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+GF++ + ++ +Y+ +D+ KVFD+ +R + V
Sbjct: 99 NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYV-------------------- 138
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR---- 244
+N + +L +G E L ++ M D T VL C
Sbjct: 139 -----------YNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECF 187
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+ ++ G+ IH++ G Y V + LVD Y K G + A VF ++P KNVVSW+A
Sbjct: 188 VSLLNKGREIHAHILRHG-YDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSA 246
Query: 305 MISGLAFNGRGELGVELYEQMI--AKGVSPNKATFVGVLTCCAHAGLVEKARELFASM-- 360
MI+ A NG+ +EL+ +++ + + PN T V VL CA +E+ R + +
Sbjct: 247 MIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILR 306
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
GL SI+P + +V + R G + + M R + W SL+SS HG
Sbjct: 307 KGLDSILPVI---SALVTMYARCGKLELGQRVFDQMDKR-DVVSWNSLISSYGVHG 358
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 257/452 (56%), Gaps = 32/452 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +FN+M +++ +N+MI AY ++ KLF + D ++ ++ +
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMINGYVR 307
Query: 113 VGDLRVGQ----------------CVHGEI----IRSGFERFGSIRI-------GVVELY 145
VG L + ++G + + E F I + ++ Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
CG+ D+ +++F EM +D++ N MI + + G +DK L +F EM+ER+VVSWN +I+
Sbjct: 368 AHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLIT 427
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++G EAL F M+ Q + D+ T+V L A L A+++G +H +G
Sbjct: 428 GYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGN 487
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+ V NA++ Y K G + A NVF EI K+VVSWN++I+G A NG G+ VEL+E M
Sbjct: 488 DLF-VKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVM 546
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+G+ P++ TF G+L+ C H G V++ LF SMT +SI P EHY C++++LGR G
Sbjct: 547 PLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGR 606
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EA ++++ M +A IWG+LL +CR H ++ELA+++ + L+ LEP N+ NYVLLSN+
Sbjct: 607 LEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNM 666
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE GRWD E +R+ M+EN +K PG S IE
Sbjct: 667 HAEAGRWDMVERVRVLMKENKAEKQPGCSWIE 698
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 161/339 (47%), Gaps = 48/339 (14%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G++++ + VF +M+ R+++ N MI + K G + LF M +R++VSWN MI+
Sbjct: 29 GRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYL 88
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ +A RLF D+ F+ D + ++ R+G ++ + + + ++
Sbjct: 89 HNELVEDAARLF----DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD----KQDT 140
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
NAL+ Y K + A+ +F E+ KNVVSWN+++SG NG+ +LG++ +E M +
Sbjct: 141 VCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER 200
Query: 329 GV---------------------------SPNKATFVGVLTCCAHAGLVEKARELFASMT 361
V +PN ++V +L+ AH G + +AR LF M
Sbjct: 201 NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMP 260
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
NL + M+ R + +AY L M + + + W +++ +G+V +
Sbjct: 261 -----TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVS-WTAMI-----NGYVRVG 309
Query: 422 E-HAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETL 458
+ +E++NL P+ N + N Y + GR D+A +
Sbjct: 310 KLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEI 348
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 172/402 (42%), Gaps = 91/402 (22%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWP 98
+S G I+ A +F QM +++ +NSMI AY+ NG +LF L+ +NL W
Sbjct: 22 ISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWN 81
Query: 99 -------------------------DEYTFAPLLKACLGVGDLR---------------- 117
D Y++ ++ +G+L
Sbjct: 82 SMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTV 141
Query: 118 -----VGQCVHGEIIRSGFERFGSIRI-------GVVELYTSCGQMDDGMKVFDEMSHRD 165
+ + R + F + + ++ YT G+M G++ F+ M R+
Sbjct: 142 CRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERN 201
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR- 224
V+ NLM+ G+ GD+D F+++ +VVSW M+S GR +EA LF+EM
Sbjct: 202 VVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPT 261
Query: 225 -------------------DQAFEL-------DEATVVAVLPICARLGAVDIGQWIHSYA 258
D A++L D + A++ G V +G+ + +
Sbjct: 262 KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMIN-----GYVRVGKLLQARE 316
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ + K ++ A+++ Y + G +D A +F +I ++ V WN+MI+G A GR +
Sbjct: 317 ILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEA 376
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+ L+++M+ K + ++ ++ A AG ++KA E+F M
Sbjct: 377 LRLFQEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEM 414
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 270/511 (52%), Gaps = 45/511 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQS-----NLILAHFVSVCGTLNEIKYATKIFNQ 59
++R RN R+ L QIH + + + L+LA S G ++ YA K+F+
Sbjct: 1 MIRKGSARNPRS-LKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMD---YARKVFDG 56
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ +P + + N M++ Y+ + L+ ++ + PD +TF LL+AC G+ G
Sbjct: 57 ISHPDLFMHNVMVRGYAHSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAG 116
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSC------------------------------- 148
VHG +++ G+ + +R ++ ++ C
Sbjct: 117 YQVHGAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAK 176
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G++D ++FDE H+D++ N+M+ + K G+++K L E+ VVSWN +I+
Sbjct: 177 GELDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYT 236
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
G EAL + EMR DEAT+V++L CA LG++ G+ IHS R +
Sbjct: 237 AKGLLKEALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSLHLEG---RPCI 293
Query: 269 SV--GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
S+ GNALV Y KCG + A VF + ++V +WN++I GLAF+G+ E V+ + +M+
Sbjct: 294 SILPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKML 353
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+G+ PN+ +F+ VL C+HAGLVE + F+ M + I PN HY C+VD+LGRSG +
Sbjct: 354 DEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLL 413
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
EA+ ++ SM P IW +LL +CR HG V L + A + L+ + SG+YVLLS IY
Sbjct: 414 DEAFAIVSSMRCEPAVVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIY 473
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A W ET+R M E ++K G + +E
Sbjct: 474 ASCDEWFGVETVRGSMDERGIRKVAGYAQVE 504
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 264/480 (55%), Gaps = 44/480 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRN 62
+ LLH N Q+HAH L+ + +++ V+ C + YA IF Q+
Sbjct: 2 LFTLLHN-NHMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDE 60
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
PS +N+MI+ + EE + L+ + G+ PD++T+ +LKAC +G + G V
Sbjct: 61 PSSFDYNTMIRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQV 120
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG + + G E ++ ++ +Y CG++ + VF+ M
Sbjct: 121 HGHVFKMGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMD-------------------- 160
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPI 241
E+SV SW+ +I + +E L L +M + ++E+T+V VL
Sbjct: 161 -----------EKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLSA 209
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKV----VSVGNALVDFYCKCGILDTARNVFKEIPRK 297
C LG+ D+G+ IH L R + V V +L+D Y K G L+ VFK + K
Sbjct: 210 CTHLGSPDLGKCIHGI-----LLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEK 264
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
N S+ MISGLA +GRG+ ++++ +MI +G++P+ +VGV + C+HAGLVE+ + F
Sbjct: 265 NRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCF 324
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM H I P ++HYGCMVD+LGR G ++EAY+LI+SMSI+PN IW SLLS+C+ H +
Sbjct: 325 KSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVHHN 384
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+E+ + A + L L NSG+Y++L+N+YA+ +WDD +R + E N+ ++PG SLIE
Sbjct: 385 LEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAERNLVQTPGFSLIE 444
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 244/429 (56%), Gaps = 1/429 (0%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A K+F+ M V+ +NS+I Y ++ + LF ++ + + D T +
Sbjct: 122 ELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAIS 181
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
A + + +G + I G + ++++Y G +D +VF +M ++++
Sbjct: 182 ATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVS 241
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MI G+ K G++ LF EM R V+SW MI + + +EA++LF EM
Sbjct: 242 WNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMV 301
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ DE TV L CA LG++D G+ +H Y + + V VGN+L+D YCKCG+++ A
Sbjct: 302 KPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI-KSDVFVGNSLIDMYCKCGVVEKAL 360
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF ++ ++ VSW ++ISGLA NG E + +++QM+ +G+ P TFVGVL CAH G
Sbjct: 361 QVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVG 420
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV+K E F SM + + P ++HYGC+VD+L RSG + AY+ I+ M I P+ IW L
Sbjct: 421 LVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRIL 480
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+C+ HG++ LAE K+L+ L+P N+GNYVL S+ YA RWDD +R M N++
Sbjct: 481 LSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQ 540
Query: 469 KSPGQSLIE 477
K S IE
Sbjct: 541 KPCAYSSIE 549
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 189/384 (49%), Gaps = 23/384 (5%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+FNQ++ P++L++N MI S + + + + + GI TF L K+C V D
Sbjct: 28 VFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSD 87
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+R GQ V ++ GFE + ++ +Y G++ KVFD M RDV+ N +I G
Sbjct: 88 VRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICG 147
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNL-MISSLGKSGRDSEALRLFHEMRDQAFE-LDEA 233
+ + K L LFREM+ +V + ++ M+ ++ + SE EM D + +DE
Sbjct: 148 YYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSE-----WEMGDYLVKYIDEH 202
Query: 234 TVV-------AVLPICARLGAVDI-GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
VV ++ + R G +D G+ + E + +VS NA++ Y K G L
Sbjct: 203 GVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKE-----KNIVS-WNAMIMGYAKVGNLV 256
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A+ +F E+P ++V+SW +MI G + + V+L+++M+ V P++ T L+ CA
Sbjct: 257 AAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACA 316
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H G ++ A E H I ++ ++D+ + G V +A + M R + + W
Sbjct: 317 HLGSLD-AGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVS-W 374
Query: 406 GSLLSSCRTHGHVELAEHAVKELI 429
S++S +G E A + +++
Sbjct: 375 TSIISGLAVNGFAESALNVFDQML 398
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L A VF +I R ++ WN MI GL+ + R + Y M KG+ + TF+ +
Sbjct: 22 LPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKS 81
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLE 371
CA V + + M +HS+ E
Sbjct: 82 CARVSDVRQGQ-----MVRVHSMKLGFE 104
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 244/429 (56%), Gaps = 1/429 (0%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A K+F+ M V+ +NS+I Y ++ + LF ++ + + D T +
Sbjct: 163 ELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAIS 222
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
A + + +G + I G + ++++Y G +D +VF +M ++++
Sbjct: 223 ATCFLSEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVS 282
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MI G+ K G++ LF EM R V+SW MI + + +EA++LF EM
Sbjct: 283 WNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMV 342
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ DE TV L CA LG++D G+ +H Y + + V VGN+L+D YCKCG+++ A
Sbjct: 343 KPDEITVATALSACAHLGSLDAGEAVHDYIRKHDI-KSDVFVGNSLIDMYCKCGVVEKAL 401
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF ++ ++ VSW ++ISGLA NG E + +++QM+ +G+ P TFVGVL CAH G
Sbjct: 402 QVFNDMKTRDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVG 461
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV+K E F SM + + P ++HYGC+VD+L RSG + AY+ I+ M I P+ IW L
Sbjct: 462 LVDKGVEHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRIL 521
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+C+ HG++ LAE K+L+ L+P N+GNYVL S+ YA RWDD +R M N++
Sbjct: 522 LSACKLHGNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQ 581
Query: 469 KSPGQSLIE 477
K S IE
Sbjct: 582 KPCAYSSIE 590
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 212/437 (48%), Gaps = 30/437 (6%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLH----QSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R + + + ++HA +R ++H + ++ H+ +L + + +FNQ++
Sbjct: 19 RAISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHF---VFNQIQR 75
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N MI S + + + + + GI TF L K+C V D+R GQ V
Sbjct: 76 PTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMV 135
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
++ GFE + + ++ +Y G++ KVFD M RDV+ N +I G+ +
Sbjct: 136 RVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRF 195
Query: 183 DKGLYLFREMRERSVVSWNL-MISSLGKSGRDSEALRLFHEMRDQAFE-LDEATVV---- 236
K L LFREM+ +V + ++ M+ ++ + SE EM D + +DE VV
Sbjct: 196 KKVLDLFREMQAINVRADSVTMMKAISATCFLSE-----WEMGDYLVKYIDEHGVVVDLY 250
Query: 237 ---AVLPICARLGAVDI-GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
++ + R G +D G+ + E + +VS NA++ Y K G L A+ +F
Sbjct: 251 LGNTLIDMYGRRGMIDFAGRVFYQMKE-----KNIVS-WNAMIMGYAKVGNLVAAKKLFN 304
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
E+P ++V+SW +MI G + + V+L+++M+ V P++ T L+ CAH G ++
Sbjct: 305 EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLD- 363
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
A E H I ++ ++D+ + G V +A + M R + + W S++S
Sbjct: 364 AGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVS-WTSIISGL 422
Query: 413 RTHGHVELAEHAVKELI 429
+G E A + +++
Sbjct: 423 AVNGFAESALNVFDQML 439
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 31/187 (16%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + +H + + + + ++ A ++FN M+ + + S+I ++NG
Sbjct: 368 VHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSIISGLAVNGF 427
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+E + +F + GI P TF +L AC VG ++ G E F S
Sbjct: 428 AESALNVFDQMLKEGICPTHGTFVGVLLACAHVG-----------LVDKGVEHFKS---- 472
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR-ERSVVS 199
M++ ++ EM H +V L C+ G +D ++M VV
Sbjct: 473 ----------MENTYRLAPEMKHYGCVVDLL-----CRSGYLDMAYNFIKKMPIVPDVVI 517
Query: 200 WNLMISS 206
W +++S+
Sbjct: 518 WRILLSA 524
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 232/411 (56%), Gaps = 32/411 (7%)
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
L NSMI+ Y+ + V ++ + GI+PD TF +LK+ + +G+ +H I
Sbjct: 109 LCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCI 168
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
I+ GFE + +V +Y +C + D +VFDE+
Sbjct: 169 IQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIP------------------------ 204
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+R++VSWN +I+ + + + +F EM+ + E T+V VL CA LG
Sbjct: 205 -------DRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLG 257
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A++ G+WI Y + + L R V VG AL+D Y KCG++D A +FK + KNV +WN +I
Sbjct: 258 ALNQGRWIDDYIDHNRL-RLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLI 316
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
SG A NGRGE ++ + +MI + P++ TF+GVL C H GLV + R F SM +
Sbjct: 317 SGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGL 376
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P +EHYGCMVD+LGR+G + EA LI++MS++P+ IW LL +CR HG+++L E A+K
Sbjct: 377 RPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIK 436
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L+ LEP N NYVLL+N+YA RWD +R M V+K PG S IE
Sbjct: 437 KLLELEPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIE 487
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 132/300 (44%), Gaps = 34/300 (11%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ + + V++ GT + + A ++F+++ + +++ +N++I Y+ N
Sbjct: 164 IHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRM 223
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ + +F ++ G P E T +L AC +G L G+ + I + +
Sbjct: 224 FRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTA 283
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG +D+ K+F M ++V N++I G+
Sbjct: 284 LIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGY------------------------ 319
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAE 259
+GR AL+ F M + F+ DE T + VL C G V+ G+ + S E
Sbjct: 320 -------AMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKE 372
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
GL ++ G +VD + G LD A+ + + + + + + W ++ +G +LG
Sbjct: 373 EFGLRPRIEHYG-CMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLG 431
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 249/433 (57%), Gaps = 5/433 (1%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A ++ Q +V+ + S+I YS G + V F + + G+ PDE
Sbjct: 185 GLLDE---ARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVI 241
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH- 163
L AC + +L +G+ +H + + ++ + ++++Y CG + VFD +
Sbjct: 242 GALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRG 301
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ N +I G+CK G VD LF +M R V+++N MI+ SGR +AL+LF +M
Sbjct: 302 QKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQM 361
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
R D TVV++L CA LGA+ G+ +H+ E + + V +G AL+D Y KCG
Sbjct: 362 RRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQR-IVEEDVYLGTALLDMYMKCGR 420
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+D A VF + ++V +W AMI+GLAFNG G+ +E + QM G P T++ VLT
Sbjct: 421 VDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTA 480
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+ L+++ R F M LH + P +EHYGCM+D+L RSG + EA L+++M ++PNA
Sbjct: 481 CSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAV 540
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWGS+LS+CR H +++LA HA + L+ L P YV L NIY + +W DA+ +RM M
Sbjct: 541 IWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLME 600
Query: 464 ENNVKKSPGQSLI 476
E VKK+ G S I
Sbjct: 601 ERGVKKTAGYSSI 613
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 197/417 (47%), Gaps = 39/417 (9%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA-YSLNGPSEEPVKLFALLKNL 94
+L+ + ++Y +F+++ + + LF++ ++A + ++ PV L +++
Sbjct: 37 LLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDTALRACLQASAGADHPVLLLRRMRSG 96
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCV--HGEIIRSGFERFGSIRIG-VVELYTSCGQM 151
G+ +TF + + C R G C+ H +R+ + ++ +Y S G
Sbjct: 97 GVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACLRTMLPSAAPLVANPLIHMYASMGLT 156
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
DD + FDE+ +D +V +I G + G +D+ L + ER+VVSW +I+ ++G
Sbjct: 157 DDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAG 216
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLG--------AVDIGQ----------- 252
R ++A+ F+ M DE V+ L C++L + +GQ
Sbjct: 217 RPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV 276
Query: 253 -WIHSYAESSGLYRKVV---SVG--------NALVDFYCKCGILDTARNVFKEIPRKNVV 300
I YA+ + + +VG NA++D YCK G +D AR++F ++ ++V+
Sbjct: 277 ALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVI 336
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++N+MI+G +GR ++L+ QM G+ + T V +LT CA G + R L AS+
Sbjct: 337 TFNSMITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASI 396
Query: 361 TGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
IV + G ++D+ + G V EA + M R + W ++++ +G
Sbjct: 397 E--QRIVEEDVYLGTALLDMYMKCGRVDEATAVFHRMGER-DVHTWTAMIAGLAFNG 450
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 256/470 (54%), Gaps = 37/470 (7%)
Query: 11 GRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+ + H + H L + L S LI +S G LN YA K+F QM+NP + N+
Sbjct: 25 SKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLN---YARKLFTQMQNPDPFICNT 81
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
MI+ Y+ + E V L+ + G+ D YT+ +L AC +G +++G+ H E++++G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +++ Y +CG VFDE + RDV
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDV------------------------ 177
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVD 249
V+WN+MI++ G +A L EM + DE T+V+++P CA+LG ++
Sbjct: 178 -------VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLE 230
Query: 250 IGQWIHSYAESSGLYRKVVSV--GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
G+++HSY++ + + ALVD Y KCG +D A VF+ + +NV +WNA+I
Sbjct: 231 RGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIG 290
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
GLA +G GE + L++QM + P+ TF+ +L C+HAGLV++ +F +M I
Sbjct: 291 GLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 350
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGC+VD+L R+ V +A I +M I+ N+ +W +LL +CR+ GH +LAE +
Sbjct: 351 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRR 410
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+I LEP + G YV+LSN+YA +WD A LR M+ ++K+PG S IE
Sbjct: 411 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIE 460
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 255/466 (54%), Gaps = 39/466 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLI--LAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIK 73
L QIHA L H + S++ L + C +I YA K+F+Q++ P++ +NSMI+
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 63
Query: 74 AYSLN-GPSEEPVKLFALLKNLGIW-PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
S + PS+EPV LF + G P+ +T A +LKAC V L GQ VH +++SGF
Sbjct: 64 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 123
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ +V Y C + KVFDE++
Sbjct: 124 GSSPFVETALVNFYAKCEDIVLASKVFDEIT----------------------------- 154
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
+R++V+W+ MIS + G +EAL LF +M+ DE T+V+V+ CA GA+D G
Sbjct: 155 --DRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTG 212
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+W+H+Y L + + ALV+ Y KCG ++ A+ VF +P K+ +W++MI GLA
Sbjct: 213 KWVHAYINKQ-LIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAI 271
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
NG E +E + +M V PN TF+GVL+ CAH+GLV + R ++SM IVP++E
Sbjct: 272 NGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLEF-GIVPSME 330
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
YGCMVD+L R+ V +A L+ +M I PN IW +LL C+ +++ +E + L+ L
Sbjct: 331 LYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLEL 390
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP N+ NY+LLSN+YA +W+ +R M+ +K PG S IE
Sbjct: 391 EPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIE 436
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 251/458 (54%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH+ ++ + +S+ + A K+F+ + + +V+ + ++I Y +G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + F L +G+ PD ++ +L AC R+G C GE I +R+ S
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACA-----RLGDCTSGEWI----DRYIS--- 242
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
D GM R+V V ++ + K G++++ +F M E+ +VS
Sbjct: 243 ------------DSGMG-------RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ MI +G +AL LF +M+ + + D T+V VL CA LGA+D+G W S +
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V +G AL+D Y KCG + A +F + RK+ V WNAM+ GL+ NG +
Sbjct: 344 RNEFLSNPV-LGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ + G+ P++ TF+G+L C H G V + R+ F +M + S+ P++EHYGCMVD+
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + EA+ LI +M ++PNA +WG+LL C+ H LAE +K+LI LEPWNSGNY
Sbjct: 463 LGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNY 522
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V LSNIY+ RW++AE +R M+E ++K S IE
Sbjct: 523 VQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIE 560
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 205/412 (49%), Gaps = 34/412 (8%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L +G N L IHA LR L Q N +L + Y+ +F+Q++ P++ L
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+MI+ ++ + L+ ++ G P+ +T +LKAC D+R+G +H ++
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G++ ++ ++ LY C DD +KVFD++ ++V
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV--------------------- 180
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
VSW +I+ SG EA+ F ++ + + D ++V VL CARLG
Sbjct: 181 ----------VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
G+WI Y SG+ R V V +L+D Y KCG L+ A +F +P K++VSW+ MI
Sbjct: 231 CTSGEWIDRYISDSGMGRNVF-VATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQ 289
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G AFNG + ++L+ QM ++ + P+ T VGVL+ CA G ++ +S+ + +
Sbjct: 290 GYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGI-WASSLMDRNEFL 348
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
N ++D+ + G V +A+++ +M R + +W +++ +GH +
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMMVGLSMNGHAK 399
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 230/390 (58%), Gaps = 4/390 (1%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDL--RVGQCVHGEIIRSGFERFG-SIRIGVVELYTS 147
++ L I P+ TF LL C + +G +H + G + + +V++Y
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
CG ++ FDE+ ++ N MI GF + G + + + +F EM ER V+SW ++I+
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
K G EAL F +M+ E D T+V VL CA LGA+ +G W+H YA GL R
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGL-RDN 179
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
V + N+L+D Y +CG ++ AR VF+++ + +VSWN++I GLA NG E +E ++ M
Sbjct: 180 VKICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQK 239
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
+G PN +F G LT C+H GLV++ + F M +H I P +EHYGC+VD+ R+G +
Sbjct: 240 QGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLE 299
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
+A ++++M ++PN + GSLL++CRT G VELAE + L++L+P NYVLLSNIYA
Sbjct: 300 DAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYA 359
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRWD A RM M+ ++K PG S IE
Sbjct: 360 AVGRWDGACKQRMTMKALGIQKKPGFSSIE 389
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 132/339 (38%), Gaps = 64/339 (18%)
Query: 21 IHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+HA+ + L NL++ V + ++ + F++++ + +N+MI + NG
Sbjct: 34 LHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELSRLCFDELKVKNSFSWNTMIDGFVRNG 93
Query: 80 PSEEPVKLFALLKNLGI--W-----------------------------PDEYTFAPLLK 108
E +++F + G+ W PD T +L
Sbjct: 94 KIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLS 153
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L +G VH ++ G I +++LY+ CG ++ +VF++M R
Sbjct: 154 ACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGER---- 209
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
++VSWN +I L +G EAL F M+ Q F
Sbjct: 210 ---------------------------TLVSWNSIIGGLAANGFTEEALEHFDLMQKQGF 242
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ ++ + L C+ G VD G E + +VD Y + G L+ A
Sbjct: 243 KPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAM 302
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
+V + +P K N V ++++ G EL L ++
Sbjct: 303 SVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLV 341
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 257/452 (56%), Gaps = 32/452 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +FN+M +++ +N+MI AY ++ KLF + D ++ ++ +
Sbjct: 252 ARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPE----KDSVSWTAMINGYVR 307
Query: 113 VGDLRVGQ----------------CVHGEI----IRSGFERFGSIRI-------GVVELY 145
VG L + ++G + + E F I + ++ Y
Sbjct: 308 VGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGY 367
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
CG+ D+ +++F EM +D++ N MI + + G +DK L +F EM+ER+VVSWN +I+
Sbjct: 368 AHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLIT 427
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++G EAL F M+ Q + D+ T+V L A L A+++G +H +G
Sbjct: 428 GYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGN 487
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+ V NA++ Y K G + A NVF EI K+VVSWN++I+G A NG G+ VEL+E M
Sbjct: 488 DLF-VKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVM 546
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+G+ P++ TF G+L+ C H G V++ LF SMT +SI P EHY C++++LGR G
Sbjct: 547 PLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGR 606
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EA ++++ M +A IWG+LL +CR H ++ELA+++ + L+ LEP N+ NYVLLSN+
Sbjct: 607 LEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNM 666
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE GRWD E +R+ M+EN +K PG S IE
Sbjct: 667 HAEAGRWDMVERVRVLMKENKAEKQPGCSWIE 698
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 161/339 (47%), Gaps = 48/339 (14%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G++++ + VF +M+ R+++ N MI + K G + LF M +R++VSWN MI+
Sbjct: 29 GRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYL 88
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ +A RLF D+ F+ D + ++ R+G ++ + + + ++
Sbjct: 89 HNELVEDAARLF----DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD----KQDT 140
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
NAL+ Y K + A+ +F E+ KNVVSWN+++SG NG+ +LG++ +E M +
Sbjct: 141 VCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER 200
Query: 329 GV---------------------------SPNKATFVGVLTCCAHAGLVEKARELFASMT 361
V +PN ++V +L+ AH G + +AR LF M
Sbjct: 201 NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMP 260
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
NL + M+ R + +AY L M + + + W +++ +G+V +
Sbjct: 261 -----TKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVS-WTAMI-----NGYVRVG 309
Query: 422 E-HAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETL 458
+ +E++NL P+ N + N Y + GR D+A +
Sbjct: 310 KLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEI 348
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 158/338 (46%), Gaps = 43/338 (12%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A ++F++M + + MI Y+ G E+ +LF LL + D L+
Sbjct: 93 VEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDK---QDTVCRNALIAG 149
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
R + + E++ + SI G YT G+M G++ F+ M R+V+
Sbjct: 150 YAKKRLFREAKKLFDEMLVKNVVSWNSILSG----YTKNGKMQLGLQFFEAMGERNVVSW 205
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR----- 224
NLM+ G+ GD+D F+++ +VVSW M+S GR +EA LF+EM
Sbjct: 206 NLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 225 ---------------DQAFEL-------DEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
D A++L D + A++ G V +G+ + + +
Sbjct: 266 SWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMIN-----GYVRVGKLLQAREILNL 320
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
+ K ++ A+++ Y + G +D A +F +I ++ V WN+MI+G A GR + + L+
Sbjct: 321 MPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLF 380
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++M+ K + ++ ++ A AG ++KA E+F M
Sbjct: 381 QEMVCKDM----VSWNTMIAAYAQAGQMDKALEMFNEM 414
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 252/465 (54%), Gaps = 36/465 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+HAH + +S +L +++ + I Y +F + P LFNS+IK+ S
Sbjct: 24 QLQQVHAHLIVTSYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
V + + + + P YTF ++K+C + L++G+ VH + SGF
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTY 143
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ +V Y+ CG D++ +F M E+S
Sbjct: 144 VQAALVTFYSKCG-------------------------------DMEAARQVFDRMPEKS 172
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VV+WN ++S ++G +A+R+F++MR+ FE D AT V++L CA+ GA+ +G W+H
Sbjct: 173 VVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQ 232
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y S GL V +G AL++ Y +CG + AR VF ++ NV +W AMIS +G G+
Sbjct: 233 YIVSEGLDVN-VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGK 291
Query: 317 LGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
V+L+ +M G PN TFV VL+ CAHAGLVE R ++ MT + ++P +EH+ C
Sbjct: 292 QAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVC 351
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNA---AIWGSLLSSCRTHGHVELAEHAVKELINLE 432
+VD+LGR+G + EAY I+ + NA A+W ++L +C+ H + +L K LI LE
Sbjct: 352 IVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P N G++V+LSNIYA G+ D+ +R M NN++K G S+IE
Sbjct: 412 PENPGHHVMLSNIYALSGKTDEVSHIRDRMMRNNLRKQVGYSIIE 456
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 242/433 (55%), Gaps = 36/433 (8%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLK 108
I+ A K+F+++ V+ +N+MI Y G +E ++LF ++ + PDE T ++
Sbjct: 171 IESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVS 230
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC + +G+ VH I GF I +++LY+
Sbjct: 231 ACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYS---------------------- 268
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
K G+V+ LF + + V+SWN +I EAL LF EM
Sbjct: 269 ---------KFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 319
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESS--GLYRKVVSVGNALVDFYCKCGILDT 286
++ T++++LP CA LGA+DIG+WIH Y G+ V S+ +L+D Y KCG +D
Sbjct: 320 TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDA 379
Query: 287 ARNVF-KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A+ VF + +++ +WNAMISG A +GR +++ +M G+ P+ TFVG+L+ C+
Sbjct: 380 AQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACS 439
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
H+G+++ R +F SMT + I P LEHYGCM+D+LG SG +EA ++I +M + P+ IW
Sbjct: 440 HSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIW 499
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
SLL +C+ HG++EL E K+LI +EP NSG+YVLLSNIYA GRW++ +R + +
Sbjct: 500 CSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDK 559
Query: 466 NVKKS-PGQSLIE 477
+KK PG S IE
Sbjct: 560 GMKKKVPGCSSIE 572
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 218/407 (53%), Gaps = 7/407 (1%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGT---LNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
IHA ++ LH +N L+ + C + YA +F+ ++ P++L++N+M + ++L
Sbjct: 7 IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ +KL+ ++ +LG+ PD YTF LLK+C + GQ +HG +++ GF+ +
Sbjct: 67 SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ +Y G+++D KVFD SHRDV+ +I G+ +G ++ LF E+ + V
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHS 256
VSWN MIS ++G EAL LF EM DE+T+V V+ CA+ ++++G+ +HS
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+ G + + + NAL+D Y K G ++TA +F + K+V+SWN +I G +
Sbjct: 247 WINDHG-FASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYK 305
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT-GLHSIVPNLEHY-G 374
+ L+++M+ G +PN T + +L CAH G ++ R + + L +V N+
Sbjct: 306 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT 365
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++D+ + G + A + S + + W +++S HG A
Sbjct: 366 SLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 241/430 (56%), Gaps = 9/430 (2%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N + A IF++M + +N+MI Y+ NG E +LF D +T+ ++
Sbjct: 218 NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMV 273
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
+ G L + V + + +I G Y C +MD ++F+ M ++V
Sbjct: 274 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAG----YVQCKRMDQARELFEAMPCQNVS 329
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N MI G+ + GD+ + F M +R +SW +I+ +SG EAL LF EM+
Sbjct: 330 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 389
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
L+ +T + L CA + A+++G+ +H +GL VGNAL+ YCKCG +D A
Sbjct: 390 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL-ESGCYVGNALLVMYCKCGNIDDA 448
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
VF+ I K VVSWN MI+G A +G G+ + L+E M G+ P+ T VGVL+ C+H
Sbjct: 449 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHT 508
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLV+K E F SMT + I N +HY CM+D+LGR+G + +A +L+++M P+AA WG+
Sbjct: 509 GLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 568
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL + R HG+ EL E A K + +EP NSG YVLLSN+YA GRW D +R+ MR+ V
Sbjct: 569 LLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 628
Query: 468 KKSPGQSLIE 477
KK PG S +E
Sbjct: 629 KKVPGYSWVE 638
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 191/483 (39%), Gaps = 110/483 (22%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIW 97
+S C ++ A +F+QM V+ +N+M+ Y+ NG +E ++F + KN W
Sbjct: 117 MISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISW 176
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
G++ Y G+++D ++
Sbjct: 177 N-----------------------------------------GMLAAYVQNGRIEDARRL 195
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+ + ++I N M+ G+ K+ + +F M ER VSWN MIS ++G EA
Sbjct: 196 FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQ 255
Query: 218 RLFHE--MRD------------QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
RLF E +RD Q LDEA V +V I Y + +
Sbjct: 256 RLFEESPVRDVFTWTAMVSGYVQNGMLDEAR--RVFDGMPEKNSVSWNAIIAGYVQCKRM 313
Query: 264 YR----------KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+ + VS N ++ Y + G + ARN F +P+++ +SW A+I+G A +G
Sbjct: 314 DQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG 373
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHS------ 365
GE + L+ +M G N++TF L+ CA +E +++ + GL S
Sbjct: 374 YGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGN 433
Query: 366 -----------------IVPNLEH-----YGCMVDVLGRSGCVREAYDLIRSMS---IRP 400
+ +E + M+ R G +EA L SM I P
Sbjct: 434 ALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILP 493
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLE-----PWNSGNYVLLSNIYAEGGRWDDA 455
+ +LS+C H L + + ++ NS +Y + ++ GR DDA
Sbjct: 494 DDVTMVGVLSAC---SHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDA 550
Query: 456 ETL 458
+ L
Sbjct: 551 QNL 553
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 128/303 (42%), Gaps = 44/303 (14%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GQ D +++F+ M R I N MI G LF +M R +VSWN+MIS
Sbjct: 63 GQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCV 122
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI------HSYAESSG 262
+ R+ A RL DQ E D + A+L A+ G V + I + +G
Sbjct: 123 RY-RNLRAARLLF---DQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNG 178
Query: 263 LYRKVVSVG--------------------NALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ V G N ++ Y K L AR +F +P ++ VSW
Sbjct: 179 MLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 238
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MISG A NG L+E+ + V T+ +++ G++++AR +F M
Sbjct: 239 NTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGMPE 294
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVR--EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+S+ N + G C R +A +L +M + N + W ++++ +G +
Sbjct: 295 KNSVSWN-------AIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIAQ 346
Query: 421 AEH 423
A +
Sbjct: 347 ARN 349
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 132/305 (43%), Gaps = 26/305 (8%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N+ I + G D L LF M RS +SWN MIS + + A +LF +M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMP 107
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ D + ++ C R + + + R VVS NA++ Y + G +
Sbjct: 108 TR----DLVSWNVMISGCVRYRNLRAARLLFDQMPE----RDVVS-WNAMLSGYAQNGYV 158
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A+ +F E+P KN +SWN M++ NGR E L+E +KA + + C
Sbjct: 159 KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE---------SKADWELISWNC 209
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEH--YGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
G V++ R + A G+ +P + + M+ ++G + EA L +R +
Sbjct: 210 MMGGYVKRNRLVDAR--GIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR-DV 266
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
W +++S +G + + A + + NS ++ + Y + R D A L M
Sbjct: 267 FTWTAMVSGYVQNG---MLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM 323
Query: 463 RENNV 467
NV
Sbjct: 324 PCQNV 328
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 237/425 (55%), Gaps = 5/425 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVG 114
NQ + +++ + S I + NG E K F+ ++ G+ P+ TF LL C G
Sbjct: 17 LNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSG 76
Query: 115 DLRVGQCVHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G +HG + G +R + ++ +Y+ ++ VFD M ++ + N MI
Sbjct: 77 SEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMI 136
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G VD + +F +M ER ++SW MI+ K G EAL F EM+ + D
Sbjct: 137 DGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYV 196
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ G W+H Y S ++ V V N+L+D YC+CG ++ AR VF +
Sbjct: 197 AIIAALNACTNLGALSFGLWVHRYVMSQD-FKNNVKVSNSLIDLYCRCGCVEFAREVFDK 255
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M +G P+ TF G LT C+H GLVE+
Sbjct: 256 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 315
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F +M H I P +EHYGC+VD+ R+G + EA +++SM ++PN + GSLL++CR
Sbjct: 316 LRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACR 375
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
THG + LAE +K L ++ NYV+LSN+YA G+W+ A +R M+ +KK PG
Sbjct: 376 THGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPG 435
Query: 473 QSLIE 477
S IE
Sbjct: 436 FSSIE 440
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 134/317 (42%), Gaps = 34/317 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 144 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALN 203
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F+ + +++LY CG ++ +VFD+M R V+
Sbjct: 204 ACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVS 263
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E + F
Sbjct: 264 WNSVIVGFAANGNAHESLVYFRKMQE-------------------------------EGF 292
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ D T L C+ +G V+ G ++ + + ++ G LVD Y + G L+ A
Sbjct: 293 KPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYG-CLVDLYSRAGRLEEA 351
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
V + +P K N V ++++ +G + E + ++ + +V + A
Sbjct: 352 LKVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAA 411
Query: 347 AGLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 412 DGKWEGASQMRRKMKGL 428
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 144/364 (39%), Gaps = 78/364 (21%)
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+K D + + ++VSW I+ L ++GR +EA + F +MR E + T +A
Sbjct: 6 RKHHADPKIQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIA 65
Query: 238 VLPICARL--GAVDIGQWIHSYAESSGLYRKVVSVG------------------------ 271
+L C G+ +G +H YA G R V VG
Sbjct: 66 LLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYME 125
Query: 272 -------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
N ++D Y + G +D A +F ++P ++++SW AMI+G G E + + +
Sbjct: 126 DKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFRE 185
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M GV P+ + L C + G + + + N++ ++D+ R G
Sbjct: 186 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMS-QDFKNNVKVSNSLIDLYCRCG 244
Query: 385 CV---REAYDLIRSMSI-------------------------------RPNAAIWGSLLS 410
CV RE +D + ++ +P+A + L+
Sbjct: 245 CVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALT 304
Query: 411 SCRTHGHVELAEHAVKELINLEPWNS-----GNYVLLSNIYAEGGRWDDAETL--RMWMR 463
+C HV L E ++ ++ + +Y L ++Y+ GR ++A + M M+
Sbjct: 305 AC---SHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMK 361
Query: 464 ENNV 467
N V
Sbjct: 362 PNEV 365
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 264/483 (54%), Gaps = 43/483 (8%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
FL L+ A V+V G I +A +F+Q+ P ++N++I+ + +
Sbjct: 6 FLSDPSELRELLFASAVAVRGA---IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDA 62
Query: 85 VKLFALL----KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
V L+ + G+ PD+ TF +L+AC +G G VH ++++G E ++
Sbjct: 63 VSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNA 122
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ ++ SCG + +FD + D + + MI G ++GD+ LF E + +VSW
Sbjct: 123 LIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSW 182
Query: 201 NLMISSLGKSG--------------RDS-----------------EALRLFHEMRDQAFE 229
N+MI++ K G RD AL LF +M+ +
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK---VVSVGNALVDFYCKCGILDT 286
D T++++L CA G +D+GQ +HS S ++ + V +GNAL+D Y KCG + +
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHS--SLSDMFSRNGFPVVLGNALIDMYAKCGSMKS 300
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF + K+V +WN+++ GLA +G ++++E+M+ V P++ TFV VL C+H
Sbjct: 301 AHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSH 360
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
G+V+K RE F M + + PN++HYGCMVD+LGR+G ++EA++ I +M PN+ IW
Sbjct: 361 GGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWR 420
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LLS+CR HG +ELA+HA ++L+ SG+YVLLSNIYA G W +E +R M ++
Sbjct: 421 TLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSG 480
Query: 467 VKK 469
V K
Sbjct: 481 VNK 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 134/373 (35%), Gaps = 98/373 (26%)
Query: 20 QIHAHFLRH-------------KLHQS--NLILA----------------HFVSVCGTLN 48
Q+HAH ++ +H S NL +A ++ C
Sbjct: 103 QVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRG 162
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNG------------PSEEPV----------- 85
+I A +F++ ++ +N MI AY+ G P + V
Sbjct: 163 DIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVR 222
Query: 86 --------KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG-S 136
+LF ++ +G PD T LL AC GDL VGQ +H + F R G
Sbjct: 223 CGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSS-LSDMFSRNGFP 281
Query: 137 IRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +G ++++Y CG M +VF M +DV
Sbjct: 282 VVLGNALIDMYAKCGSMKSAHEVFWSMRDKDV---------------------------- 313
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+WN ++ L G E++ +F +M DE T VAVL C+ G VD G+
Sbjct: 314 ---STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREF 370
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNG 313
+ + + +VD + G+L A + N V W ++S +G
Sbjct: 371 FNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVHG 430
Query: 314 RGELGVELYEQMI 326
EL Q++
Sbjct: 431 EIELAKHANRQLL 443
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 241/430 (56%), Gaps = 9/430 (2%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N + A IF++M + +N+MI Y+ NG E +LF D +T+ ++
Sbjct: 137 NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF----EESPVRDVFTWTAMV 192
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
+ G L + V + + +I G Y C +MD ++F+ M ++V
Sbjct: 193 SGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAG----YVQCKRMDQARELFEAMPCQNVS 248
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
N MI G+ + GD+ + F M +R +SW +I+ +SG EAL LF EM+
Sbjct: 249 SWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDG 308
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
L+ +T + L CA + A+++G+ +H +GL VGNAL+ YCKCG +D A
Sbjct: 309 ERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL-ESGCYVGNALLVMYCKCGNIDDA 367
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
VF+ I K VVSWN MI+G A +G G+ + L+E M G+ P+ T VGVL+ C+H
Sbjct: 368 YIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHT 427
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLV+K E F SMT + I N +HY CM+D+LGR+G + +A +L+++M P+AA WG+
Sbjct: 428 GLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGA 487
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL + R HG+ EL E A K + +EP NSG YVLLSN+YA GRW D +R+ MR+ V
Sbjct: 488 LLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGV 547
Query: 468 KKSPGQSLIE 477
KK PG S +E
Sbjct: 548 KKVPGYSWVE 557
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 116/497 (23%), Positives = 197/497 (39%), Gaps = 113/497 (22%)
Query: 29 KLHQS---NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
+LH S + + H + C ++ A +F+QM V+ +N+M+ Y+ NG +E
Sbjct: 22 QLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAK 81
Query: 86 KLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
++F + KN W G++
Sbjct: 82 EIFDEMPCKNSISWN-----------------------------------------GMLA 100
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
Y G+++D ++F+ + ++I N M+ G+ K+ + +F M ER VSWN M
Sbjct: 101 AYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTM 160
Query: 204 ISSLGKSGRDSEALRLFHE--MRD------------QAFELDEATVVAVLPICARLGAVD 249
IS ++G EA RLF E +RD Q LDEA V +V
Sbjct: 161 ISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR--RVFDGMPEKNSVS 218
Query: 250 IGQWIHSYAESSGLYR----------KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
I Y + + + + VS N ++ Y + G + ARN F +P+++
Sbjct: 219 WNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDS 278
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW A+I+G A +G GE + L+ +M G N++TF L+ CA +E +++
Sbjct: 279 ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 338
Query: 360 M--TGLHS-----------------------IVPNLEH-----YGCMVDVLGRSGCVREA 389
+ GL S + +E + M+ R G +EA
Sbjct: 339 VVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEA 398
Query: 390 YDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-----PWNSGNYVL 441
L SM I P+ +LS+C H L + + ++ NS +Y
Sbjct: 399 LMLFESMKKTGILPDDVTMVGVLSAC---SHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455
Query: 442 LSNIYAEGGRWDDAETL 458
+ ++ GR DDA+ L
Sbjct: 456 MIDLLGRAGRLDDAQNL 472
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L AR +F ++P ++VVSWNAM+SG A NG + E++++M K N ++ G+L
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAA 101
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
G +E AR LF S I N CM+ + + +A + M R +
Sbjct: 102 YVQNGRIEDARRLFESKADWELISWN-----CMMGGYVKRNRLVDARGIFDRMPERDEVS 156
Query: 404 IWGSLLSSCRTHGHVELAEHAVKE--LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
W +++S +G + A+ +E + ++ W + + + Y + G D+A +
Sbjct: 157 -WNTMISGYAQNGELLEAQRLFEESPVRDVFTWTA-----MVSGYVQNGMLDEARRVFDG 210
Query: 462 MRENN 466
M E N
Sbjct: 211 MPEKN 215
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/434 (33%), Positives = 248/434 (57%), Gaps = 4/434 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + + CG L A +FN+M V+ +NS+I YS + +E + LF L++ +
Sbjct: 981 LIYLYAACGAL---ACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEV 1037
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
D+ T ++ AC +GD + C+ I + E + +++ Y GQ+ K
Sbjct: 1038 QADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEK 1097
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF +M ++ + N MI + K G++ +F ++ + ++SW+ MI + ++ S++
Sbjct: 1098 VFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDS 1157
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF +M+ + D + +VL CA LGA+D+G+WIH Y + + + + N+L+D
Sbjct: 1158 LELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTI-MENSLID 1216
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+ KCG + A VF ++ K+ +SWN++I GLA NG + ++++ M+ +G PN+ T
Sbjct: 1217 MFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVT 1276
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+GVL CA+ LVE+ + F M +H++ P ++HYGC+VD+L R+G + +A I M
Sbjct: 1277 FLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEM 1336
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ P+ +W LL +CRTHG+V +AE A K+L L+P NS + +LLSNIYA RW DA
Sbjct: 1337 PLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAM 1396
Query: 457 TLRMWMRENNVKKS 470
+R W +N V +S
Sbjct: 1397 NVRRWTADNAVGES 1410
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 237/422 (56%), Gaps = 11/422 (2%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL--GIWPDEYTFAPLLK 108
+ A K+F+Q P + + +KAYS +GP P++ L K+ + D + F +LK
Sbjct: 435 RTALKVFDQSPAP----WRAFLKAYS-HGPF--PLEALHLFKHARQHLADDTFVFTFVLK 487
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G+G R G +H +++ GFE + ++ +Y + + KVFDEM ++V+
Sbjct: 488 ACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVS 547
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N+MI GF G+V+ LF +M R+VVSW +I ++ +EAL L M
Sbjct: 548 WNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGI 607
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E TV+AV+P + LG + +G+ ++ Y E G+ VGN+L+D Y K G + +
Sbjct: 608 SPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDA-RVGNSLIDLYAKIGSVQNSL 666
Query: 289 NVFKE-IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
VF E + R+N+VSW ++ISG A +G +EL+ +M G+ PN+ TF+ V+ C+H
Sbjct: 667 KVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHG 726
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLVE+ F SM ++I P ++H+GC++D+LGR+G + EA +I + + N +W
Sbjct: 727 GLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRI 786
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL C +G V + E A+K + +LE + G++ +LSN+ E GR+ DAE R + + +
Sbjct: 787 LLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKI 846
Query: 468 KK 469
K
Sbjct: 847 VK 848
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 198/413 (47%), Gaps = 14/413 (3%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQM 60
+RKI++L + ++HAH + LH ++ + + +++ A K+F Q+
Sbjct: 843 QRKIVKLQEA--VMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQI 900
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P+ L+N++++ + + ++ + + + G+ PD TF +LKAC + G+
Sbjct: 901 ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGE 960
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H +I+ GF + ++ LY +CG + VF+EM +DV+ N +I G+ +
Sbjct: 961 QMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHN 1020
Query: 181 DVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ + L LF+ M+ V V+ +IS+ G S A + + E+D
Sbjct: 1021 RLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGN 1080
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++ R+G + + + S + + V++ NA++ Y K G L +A+ +F +IP
Sbjct: 1081 TLIDYYCRIGQLQSAEKVFSQMKD----KNTVTL-NAMITAYAKGGNLVSAKKIFDQIPN 1135
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+++SW++MI + +EL+ QM V P+ VL+ CAH G ++ + +
Sbjct: 1136 KDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWI 1195
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
++I + ++D+ + GCV+EA + M + + W S++
Sbjct: 1196 H-DYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEK-DTLSWNSII 1246
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 5/180 (2%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E++YA +F+QM +V+ + +I Y+ E + L + GI P E T ++
Sbjct: 560 EVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIP 619
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVI 167
A +G + +G+ ++G + G + +++LY G + + +KVFDEM R+++
Sbjct: 620 AISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLV 679
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEM 223
+I GF G + L LF EMR + +++ +I++ G + L F M
Sbjct: 680 SWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSM 739
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + R+ + ++ + + ++ A ++F M L +NS+I + NG
Sbjct: 1195 IHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGF 1254
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACL-------GVGDLRVGQCVHGEIIRSGFER 133
+E + +F + G P+E TF +L AC G+ + VH + +
Sbjct: 1255 EDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHN--LEPQMKH 1312
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCK 178
+G VV++ + GQ++ + EM D +V +++ G C+
Sbjct: 1313 YGC----VVDILSRAGQLEKAVSFISEMPLAPDPVVWRILL-GACR 1353
>gi|357446911|ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482779|gb|AES63982.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 265/473 (56%), Gaps = 12/473 (2%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
T +H +IH+H L+ + I + + + ++YA ++F+ + + ++ +N MI
Sbjct: 51 QTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMI 110
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG------VGDLRVGQCVHGEI 126
Y NG +E + LF L G PD +TF+ +LKA VGDL G+ VH +I
Sbjct: 111 GGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDL--GRMVHAQI 168
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
++ E+ + +++ Y G++ G VFD MS ++VI +I G+ KG D
Sbjct: 169 LKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAE 228
Query: 187 YLFREMRERSVVSWNLMISSLGK-SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
Y+FR+ ++ VV +N MI K S +L ++ +M+ F + +T +++ C+ L
Sbjct: 229 YIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVL 288
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A +IG+ + + + + V+ +G+AL+D Y KCG + A+ VF + KNV SW +M
Sbjct: 289 AAFEIGEQVQAQLMKTPFF-AVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSM 347
Query: 306 ISGLAFNGRGELGVELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
I G NG + +EL+++M I ++PN TF+ LT CAHAGLVE+ E+F SM +
Sbjct: 348 IDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEY 407
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
+ P +EHY CMVD+LGR+G + +A++ + M RPN+ +W +LLSSCR HG++E+A+ A
Sbjct: 408 KLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLA 467
Query: 425 VKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
EL L + G YV LSN A+ G+WD+ LR M+E + K S +
Sbjct: 468 ANELFKLNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 244/434 (56%), Gaps = 37/434 (8%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G LN+ A K+F+++ + SV+ + ++ Y+ +G E + LF + +G+ PD Y
Sbjct: 160 GRLND---AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIV 216
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-H 163
+L AC+ VGDL G+ + +K +EM
Sbjct: 217 QVLSACVHVGDLDSGEWI--------------------------------VKYMEEMEMQ 244
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
++ VR +++ + K G ++K +F M E+ +V+W+ MI + E + LF +M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D+ ++V L CA LGA+D+G+W S + + + NAL+D Y KCG
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGA 363
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ VFKE+ K++V NA ISGLA NG +L ++ Q G+SP+ +TF+G+L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C HAGL++ F +++ ++++ +EHYGCMVD+ GR+G + +AY LI M +RPNA
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+WG+LLS CR +LAE +KELI LEPWN+GNYV LSNIY+ GGRWD+A +R M
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 544 KKGMKKIPGYSWIE 557
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 34/419 (8%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
++I L+ T HL QIH + H LH ++ + + KY+ +F+ +
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF 73
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ L+NS+I + N E + LF ++ G++ +TF +LKAC ++G +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H +++ GF + ++ +Y+ G+++D K+FDE+ R V+ + G+
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT----- 188
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
SGR EA+ LF +M + + D +V VL C
Sbjct: 189 --------------------------TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G +D G+WI Y E + +K V LV+ Y KCG ++ AR+VF + K++V+W
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEM-QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+ MI G A N + G+EL+ QM+ + + P++ + VG L+ CA G ++ E S+
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLID 340
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + NL ++D+ + G + +++ + M + I + +S +GHV+L+
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 248/462 (53%), Gaps = 34/462 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q+HAH + +S +L +++ I Y +IF + NP LF S+IK+ S
Sbjct: 28 LHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQIFLAVPNPDSFLFTSLIKSTSK 87
Query: 78 N-GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ S + ++ + + P YTF ++K+C + L+ G+ VHG ++ GF
Sbjct: 88 SHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVY 147
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ +V LY CG + + KV F ++RERS
Sbjct: 148 VQAALVALYGKCGDLINARKV-------------------------------FDKIRERS 176
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V+WN MIS ++G EA+ LF M++ E D AT V+VL CA LGA +G W+H
Sbjct: 177 IVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHE 236
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y +GL VV +G +L++ Y +CG + AR VF + +NVV+W AMISG NG G
Sbjct: 237 YIVGNGLDLNVV-LGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGS 295
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
VEL+ +M G+ PN TFV VL+ CAHAGLV + R LFAS+ + +VP +EH C+
Sbjct: 296 QAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCL 355
Query: 377 VDVLGRSGCVREAYDLIR-SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
VD+LGR+G + EAY+ I+ + P AI ++L +C+ H + +L + L+ EP N
Sbjct: 356 VDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPEN 415
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+YV+LSNIYA GR D E +R M +KK G S +E
Sbjct: 416 PAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVE 457
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 45/349 (12%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L HGR +H H L H + A V++ G ++ A K+F+++R S++
Sbjct: 127 LKHGR-------VVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVA 179
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NSMI Y NG ++E + LF +K G+ PD TF +L AC +G +G VH I+
Sbjct: 180 WNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIV 239
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+G + + ++ +Y CG + +VFD M R+V+ MI G+ G + +
Sbjct: 240 GNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVE 299
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
LF HEMR + T VAVL CA G
Sbjct: 300 LF-------------------------------HEMRRNGLFPNSITFVAVLSACAHAGL 328
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGN--ALVDFYCKCGILDTARNVFK-EIPRKNVVS-WN 303
V+ G+ + +A Y V V + LVD + G+LD A N K EIP +
Sbjct: 329 VNEGRRL--FASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILT 386
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
AM+ + +LG ++ E ++A N A +V + A AG +++
Sbjct: 387 AMLGACKMHKNFDLGAQVAEHLLA-AEPENPAHYVILSNIYALAGRMDQ 434
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/518 (34%), Positives = 270/518 (52%), Gaps = 41/518 (7%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFN 58
I IL + + L QI AH + L ++ ++ C + +I +A +F+
Sbjct: 49 ITHPILLAMESCTSMLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFS 108
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q++NP+ ++N+MI+ YS + F + G+ D +F LKAC +
Sbjct: 109 QLQNPNTYIWNTMIRGYSKAKMGQTGFLFFCQMVQKGVEMDCRSFVFALKACEQFLGVLE 168
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ VH + + GF ++ G+V Y G + VFDE+S RDV+ MI G+ K
Sbjct: 169 GKSVHCVVWKMGFVYTLLVQNGLVHFYGLRGCLGLARLVFDEISERDVVSWTSMIDGYSK 228
Query: 179 KGDVDKGLYLFREMRERSVVSWN--LMISSLG------------------KSGRDSEALR 218
D+ L LF M VV N MI+ L K+ + +L
Sbjct: 229 HKWCDEALKLFDSMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTRNVTRSLN 288
Query: 219 LFHEMRDQ-------------------AFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
L + + D AF E T+ VLP+C +LG +D+GQWIH
Sbjct: 289 LMNAILDMYVKCGCLDSAREIFDTMGAAFAPMENTLACVLPVCGQLGCLDVGQWIHRNYV 348
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V + NAL+D Y KCG++ A VF ++P +N+VSWN+MI+ A +G + +
Sbjct: 349 RMRYNEISVILANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASHGHAKQAL 408
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++E+MI+ G P+ T VGVL+ C+H GLV + +E F +M + I P EHY CM+D+
Sbjct: 409 SVFERMISGGFKPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEHYACMIDL 468
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR G + +AY+LI M + P+AA WG+L+ +CR HG+VE+A+ A L+ L+P +SG Y
Sbjct: 469 LGRVGLLEDAYELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLLELDPEDSGIY 528
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLL+NI A G RW D + R MRE VKK PG+S++E
Sbjct: 529 VLLANICASGRRWGDVKMARRMMRERRVKKIPGRSIVE 566
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 246/431 (57%), Gaps = 5/431 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +NE + +F++ N V+L+NSMI Y N E + LF ++N D T
Sbjct: 266 CGRVNE---SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTL 321
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A ++ AC+G+G L G+ +H + G + ++++Y+ CG + K+F E+
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D I+ N MI + G +D +F + +S++SWN M + ++G E L FH+M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
DE ++ +V+ CA + ++++G+ + + A GL V V ++L+D YCKCG
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGF 500
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ R VF + + + V WN+MISG A NG+G ++L+++M G+ P + TF+ VLT
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C + GLVE+ R+LF SM H VP+ EH+ CMVD+L R+G V EA +L+ M + +
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W S+L C +G+ + + A +++I LEP NS YV LS I+A G W+ + +R MR
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 464 ENNVKKSPGQS 474
ENNV K+PG S
Sbjct: 681 ENNVTKNPGSS 691
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A ++FN M V+ NS++ Y LNG +EE ++LF K L D T +LK
Sbjct: 139 ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF---KELNFSADAITLTTVLK 195
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC + L+ G+ +H +I+ G E + +V +Y CG + + +++ D
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+ +I G+ G V++ LF R V+ WN MIS + EAL LF+EMR++
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR 315
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI----- 283
E D T+ AV+ C LG ++ G+ +H +A GL +V V + L+D Y KCG
Sbjct: 316 E-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV-VASTLLDMYSKCGSPMEAC 373
Query: 284 --------------------------LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+D A+ VF+ I K+++SWN+M +G + NG
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS--IVPNLEHY 373
+E + QM + ++ + V++ CA +E ++FA T GL S +V +
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS---- 489
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
++D+ + G V + +M ++ + W S++S T+G
Sbjct: 490 -SLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 164/411 (39%), Gaps = 73/411 (17%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI---GVVELYTSCGQMDDGMKVFD 159
+ LL++C + + +G +++ GF SI I ++++Y+ G+M +FD
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGF--LSSIVIVANHLLQMYSRSGKMGIARNLFD 86
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
EM R+ N MI G+ G+ L F M ER SWN+++S K+G S A RL
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 220 FHEM----------------------------RDQAFELDEATVVAVLPICARLGAVDIG 251
F+ M ++ F D T+ VL CA L A+ G
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCG 206
Query: 252 QWIHSY----------AESSGLYRKVVSVGN--------------------ALVDFYCKC 281
+ IH+ +S L G+ AL+ Y C
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G ++ +R +F + V+ WN+MISG N + L+ +M + T V+
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVI 325
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C G +E +++ ++ ++ ++D+ + G EA L + +
Sbjct: 326 NACIGLGFLETGKQMHCHACKF-GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYD 383
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYAEGG 450
+ S++ + G ++ A+ + + N L WNS ++N +++ G
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS-----MTNGFSQNG 429
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 226 QAFELD-EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
QA E+D V +L C+ + + + G +V V N L+ Y + G +
Sbjct: 19 QAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKM 78
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTC 343
ARN+F E+P +N SWN MI G +G + ++ M + G S N V++
Sbjct: 79 GIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV-----VVSG 133
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
A AG + AR LF +M + N +G +++ G EA L + ++ +A
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAI 188
Query: 404 IWGSLLSSC 412
++L +C
Sbjct: 189 TLTTVLKAC 197
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 274/477 (57%), Gaps = 21/477 (4%)
Query: 14 TRTHLTQIHAHFL---RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
T HL Q+H + R + L F S+ L+ + YA ++F+ +P+V L+++
Sbjct: 21 TLAHLKQLHGRSVVTARAASQSTTFQLLRFASL--RLSCLPYARRLFDSTPHPNVFLYSA 78
Query: 71 MIKAYSLNGP----SEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
M+ AY+ P + + LF +L+ P+++ + +L+A +G +++ + +H
Sbjct: 79 MLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAACAIG-VQLVRSIHSH 137
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+SGF + IR +++ Y+ G M D K+FD ++ R+VI ++ G+ + G +
Sbjct: 138 ACKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGLTERNVISWTALVSGYARAGKIGDA 197
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+ LF M ER V +WN MI+ ++G EA+ + M D+ F+L+ TV VL C L
Sbjct: 198 IVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQLNGTTVSCVLSACGHL 257
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEIPRKNVVS 301
G + IG+ +H YA +R V G N L+D Y KCG L AR +F E +++ +
Sbjct: 258 GMLKIGKVVHGYA-----WRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTT 312
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN++I+ LA +G + + ++++M +G+ P+ TFVG+L C H G V++ F M
Sbjct: 313 WNSLINCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEGLTYFKLMC 372
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
I P +EHYGC+VD+LGR+G +A ++I M ++P+ IWGSLL++CRTH +ELA
Sbjct: 373 DELRIEPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTHRQLELA 432
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-KKSPGQSLIE 477
E +V++L+ L P N+ V+L+N+Y+EGG W++ +R M+E+ + KK PG S IE
Sbjct: 433 EFSVRKLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIE 489
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 234/391 (59%), Gaps = 35/391 (8%)
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
+L+N + P + +F+ +L++C G+ ++G+ H +I++ GFE
Sbjct: 20 GMLRN-DVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEY--------------- 63
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV--VSWNLMISS 206
D+I++ ++ + K G V++ LF M ER+ V+WN MIS+
Sbjct: 64 ----------------DMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSVTWNTMISA 107
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
+ G A+ +F +M+ + + E T+V++L CA LGA+D+G+WIH Y + L
Sbjct: 108 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 167
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
VV +GNAL+D YCKCG L+ A +VF + RKN+ WN++I GL NGRGE + + M
Sbjct: 168 VV-LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 226
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+G+ P+ TFVG+L+ C+H+GL+ + F+ M G++ + P +EHYGCMVD+LGR+G +
Sbjct: 227 KEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYL 286
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
+EA +LIR+M ++PN+ + GSLL +C+ H +L E ++L+ L+P + GNYV LSN+Y
Sbjct: 287 KEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLY 346
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A RWDD T R M + V K+PG S IE
Sbjct: 347 ASLSRWDDVNTCRKLMIKRGVHKTPGCSSIE 377
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 50 IKYATKIFNQM--RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
++ A +F+ M RN + + +N+MI AY G + +F +++ + P E T LL
Sbjct: 81 VEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLL 140
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
AC +G L +G+ +HG I + + ++++Y CG ++ + VF +S +++
Sbjct: 141 SACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNI- 199
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
FC WN +I LG +GR EA+ F M +
Sbjct: 200 --------FC----------------------WNSIIVGLGMNGRGEEAIAAFIVMEKEG 229
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGILD 285
+ D T V +L C+ G + GQ ++E G+Y V +VD + G L
Sbjct: 230 IKPDGVTFVGILSGCSHSGLLSAGQ--RYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLK 287
Query: 286 TARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
A + + +P K N + +++ + +LG ++ +Q++
Sbjct: 288 EALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLL 329
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L + A +F+ + ++ +NS+I +NG EE + F +++ GI PD TF
Sbjct: 181 CGAL---EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTF 237
Query: 104 APLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+L C G L GQ E+ + G E +G + V+L G + + +++
Sbjct: 238 VGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCM----VDLLGRAGYLKEALELI 293
Query: 159 DEMSHRD------VIVRNLMIHGFCKKGD-----------VDKGLYLFREMRERSVVSWN 201
M + ++R IH K G+ D G Y+F S+ W+
Sbjct: 294 RAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWD 353
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 239/458 (52%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ H + +L +S+ + A ++F++M +PS + + ++I AY G
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 151
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V + G+ PD +T +L AC + DL G+ V + G + +
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 211
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+LY CG+M +VFD+ MR + V+
Sbjct: 212 AAVDLYVKCGEMAKAREVFDK-------------------------------MRHKDAVA 240
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W M+ +G EAL LF M+ + + D V L C RLGA+D+G+ +
Sbjct: 241 WGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVD 300
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V +G AL+D Y KCG A VF+++ +K+++ WNAMI GL G ++
Sbjct: 301 WDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 359
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L QM GV N TF+G+L C H GL++ R F +MT L+ I P +EHYGCMVD+
Sbjct: 360 ALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDL 419
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G ++EA+ L+ M + NA I G+LL C+ H + ELAEH +K+LI LEPWNSGNY
Sbjct: 420 LSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNY 479
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIY+ GRW+DA LR+ M+ V+K P S +E
Sbjct: 480 VMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 517
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 262/465 (56%), Gaps = 12/465 (2%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+++ ++ L + + + + ++ ++F +M V+ +N +I Y
Sbjct: 153 KVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCR 212
Query: 80 PSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG-SI 137
E+ V +F ++ + P+E T L AC+ + L +G+ +H R E+ G +I
Sbjct: 213 RYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH----RYVREQLGFTI 268
Query: 138 RIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+IG +V++Y CG + ++F++M + VI M+ G+ G +D+ LF R
Sbjct: 269 KIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVR 328
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
VV W MI+ + R +A+ LF EM+ + D T+VA+L CA+LG ++ G+WIH
Sbjct: 329 DVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIH 388
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + + + V VG AL++ Y KCG ++ + +F + K+ SW ++I GLA NG+
Sbjct: 389 GYIDENKIMIDAV-VGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKT 447
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+EL+ +M+ GV P+ TF+GVL+ C+H GLVE+ R+ F SMT ++ I P LEHYGC
Sbjct: 448 SKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGC 507
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAI---WGSLLSSCRTHGHVELAEHAVKELINLE 432
++D+LGR+G + EA +LI N I +G+LLS+CRTHG+VE+ E K L+ +E
Sbjct: 508 LIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIE 567
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+S + LL+NIYA RW+D +R M++ VKK PG S +E
Sbjct: 568 SGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVE 612
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 221/464 (47%), Gaps = 71/464 (15%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ 59
++ + LL + HL QI LR HQS L F+ C ++ + YA +IFN
Sbjct: 32 KKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNY 91
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ P + ++N +IKA++ NG + V LF L+ G+ PD +T+ + KA +G++R G
Sbjct: 92 IDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREG 151
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ V+G +++SG E + ++++Y G++ + +VF+EM RDV+ N++I G+ K
Sbjct: 152 EKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKC 211
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ + +FR M+++S + N EATVV+ L
Sbjct: 212 RRYEDAVDVFRRMQQQSSLRPN------------------------------EATVVSTL 241
Query: 240 PICARLGAVDIGQWIHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
C L +++G+ IH Y E G + +GNALVD YCKCG L AR +F ++P K
Sbjct: 242 SACIALKMLELGKEIHRYVREQLGF---TIKIGNALVDMYCKCGHLSIAREIFNDMPIKT 298
Query: 299 VVSWNAMISG--------------------------------LAFNGRGELGVELYEQMI 326
V+ W +M+SG + FN R + V L+ +M
Sbjct: 299 VICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFN-RFDDAVALFREMQ 357
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
K VSP++ T V +LT CA G +E+ + + + + I+ + ++++ + G +
Sbjct: 358 IKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDE-NKIMIDAVVGTALIEMYAKCGFI 416
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
++ ++ + + A+ W S++ +G A E++
Sbjct: 417 EKSLEIFNGLKEKDTAS-WTSIICGLAMNGKTSKALELFAEMVQ 459
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 272/495 (54%), Gaps = 28/495 (5%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFL---RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
R + +L +TR HL Q+HAH R + L F + L+ + YA +F+
Sbjct: 10 RDFVAVLSRCSTRAHLEQLHAHAFVAGRAAAQTTTFHLIRFAAF--RLSCLTYARHLFDA 67
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVK------------LFALLKNLGIWPDEYTFAPLL 107
+PSV L+++++ AY + +L++ P+++ + +L
Sbjct: 68 TPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPLVL 127
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
+A GVG + + + +H +SGF IR V++ Y+ G M D K+FD ++ R+V+
Sbjct: 128 RAASGVG-VGIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGLTERNVV 186
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
++ G+ + G V + LF M ER V +WN +I+ ++G EA+ +F M
Sbjct: 187 SWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMVGAG 246
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGI 283
F + TV VL C LG + IG+ IH YA +R V G N L+D Y KCG
Sbjct: 247 FRPNATTVSCVLSACGHLGMLKIGKLIHCYA-----WRTCVGFGSSVLNGLIDMYGKCGN 301
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L+ AR +F E+ +++ +WN++I+ LA +G + + ++ +M +GV P+ TFVG+L
Sbjct: 302 LEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNA 361
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H G V++ F M H I P +EHYGC++D+LGR+G ++A ++I M I +
Sbjct: 362 CTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEV 421
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+WGSLL++CR H VE AE A+++L+ L+P N+ V+L+N+Y+EGG W++ +R +++
Sbjct: 422 MWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFVK 481
Query: 464 ENNV-KKSPGQSLIE 477
E N+ KK PG S IE
Sbjct: 482 EENIGKKLPGCSWIE 496
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 258/464 (55%), Gaps = 35/464 (7%)
Query: 17 HLTQI-HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL+ + HA + L+ + + +++ L++ A K+FN + + V+ +N+M+KAY
Sbjct: 145 HLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAY 204
Query: 76 SLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G + E ++ ++K+ + P+ T A +L AC GDL +G+ V +G E
Sbjct: 205 GRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETD 264
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +V +Y CG++ + +VFD + +DV
Sbjct: 265 SLVGSALVGMYEKCGEIAEARRVFDSIIDKDV---------------------------- 296
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
V+WN MI+ ++G +EA+ LFH M+ D+ T+ VL C+ +GA+++G +
Sbjct: 297 ---VAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSEL 353
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
YA GLY V VG ALVD Y KCG LD A VF+++ KNV SWNA+I GLAFNG+
Sbjct: 354 DGYASCRGLYNNVY-VGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQ 412
Query: 315 GELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G+ ++ +E M + G+ P+ TF+GVL+ C HAGLV+ + F S+T I+P +EHY
Sbjct: 413 GDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHY 472
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
CMVD L RSG + E +D I + + +A + G+LL++CR +VE+ E + +I LEP
Sbjct: 473 SCMVDPLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEP 532
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NS NYV+ S IYA GR DD+ +R MRE V K+PG S +E
Sbjct: 533 TNSWNYVVSSKIYASSGRLDDSAKMRGLMRERGVNKTPGCSWVE 576
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 251/458 (54%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH+ ++ + +S+ + A K+F+ + + +V+ + ++I Y +G
Sbjct: 135 KIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSG 194
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + F L +G+ PD ++ +L AC R+G C GE I +R+ S
Sbjct: 195 HFREAIGAFKKLLEMGLKPDSFSLVKVLAACA-----RLGDCTSGEWI----DRYIS--- 242
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
D GM R+V V ++ + K G++++ +F M E+ +VS
Sbjct: 243 ------------DSGMG-------RNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ MI +G +AL LF +M+ + + D T+V VL CA LGA+D+G W S +
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V +G AL+D Y KCG + A +F + +K+ V WNAM+ GL+ NG +
Sbjct: 344 RNEFLSNPV-LGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVF 402
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ + G+ P++ TF+G+L C H G V + R+ F +M + S+ P++EHYGCMVD+
Sbjct: 403 SLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDL 462
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + EA+ LI +M ++PNA +WG+LL C+ H LAE +K+LI LEPWNSGNY
Sbjct: 463 LGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNY 522
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V LSNIY+ RW++AE +R M+E ++K S IE
Sbjct: 523 VQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIE 560
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 205/412 (49%), Gaps = 34/412 (8%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L +G N L IHA LR L Q N +L + Y+ +F+Q++ P++ L
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+MI+ ++ + L+ ++ G P+ +T +LKAC D+R+G +H ++
Sbjct: 82 WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++G++ ++ ++ LY C DD +KVFD++ ++V
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV--------------------- 180
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
VSW +I+ SG EA+ F ++ + + D ++V VL CARLG
Sbjct: 181 ----------VSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGD 230
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
G+WI Y SG+ R V V +L+D Y KCG L+ A +F +P K++VSW+ MI
Sbjct: 231 CTSGEWIDRYISDSGMGRNVF-VATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQ 289
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G AFNG + ++L+ QM ++ + P+ T VGVL+ CA G ++ +S+ + +
Sbjct: 290 GYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGI-WASSLMDRNEFL 348
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
N ++D+ + G V +A+++ +M + + +W +++ +GH +
Sbjct: 349 SNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMMVGLSMNGHAK 399
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 238/458 (51%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ H + +L +++ + A ++F++M +PS + + ++I AY G
Sbjct: 92 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 151
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V + G+ PD +T +L AC V DL G+ V + G + +
Sbjct: 152 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 211
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+LY CG+M +VFD+ MR++ V+
Sbjct: 212 AAVDLYVKCGEMAKAREVFDK-------------------------------MRDKDAVA 240
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W M+ +G EAL LF M+ + D V L C RLGA+D+G+ +
Sbjct: 241 WGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVD 300
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V +G AL+D Y KCG A VF+++ +K+++ WNAMI GL G +
Sbjct: 301 WDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAF 359
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L QM GV N TF+G+L C H GL++ R F +MT L+ I P +EHYGC+VD+
Sbjct: 360 TLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDL 419
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G ++EA+ LI M + NA I G+LL C+ H + ELAEH + +LI LEPWNSGNY
Sbjct: 420 LSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNY 479
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIY+ GRW+DA LR+ M+E V+K P S +E
Sbjct: 480 VMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVE 517
>gi|413934702|gb|AFW69253.1| hypothetical protein ZEAMMB73_589560 [Zea mays]
Length = 664
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 243/435 (55%), Gaps = 10/435 (2%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK-----NLGIWPDEYTFA 104
++YA +F+ + P L ++++ L P E +LF+ L+ +L P + F+
Sbjct: 104 LRYAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRLFSRLRCAHGSDLPFLP--FAFS 161
Query: 105 PLLKACLGVGDLRVGQCVHGEI-IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
PL K+ L H + GF++ + ++ Y +CG + KVFDEM
Sbjct: 162 PLAKSAAAARSLHAAASAHAVSLLLGGFDKHRFVENSLISAYVACGDVGAARKVFDEMLV 221
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+DVI ++ + + D+ +F + +V+W M++ ++ +AL F +M
Sbjct: 222 KDVISWTSIVVAYSRIRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQM 281
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+DE ++ + CA+LGAV W+ AE +GL R VV VG+ LVD Y KCG+
Sbjct: 282 AVAGMPIDEVSLTGAISACAQLGAVKRAAWVQEIAERNGLGRNVV-VGSGLVDMYAKCGL 340
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLT 342
+D AR VF+ + KNV ++++MI GLA +GR + L+ M+ + V PN TF+GVLT
Sbjct: 341 IDEARKVFEGMHDKNVYTYSSMIVGLASHGRANDVIALFNDMVRRADVEPNHVTFIGVLT 400
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C+HAG+V++ R FA M + I+P+ +HY CMVD+L RSG V EA DL++SM++ P+
Sbjct: 401 ACSHAGMVKEGRYYFAQMKDRYGILPSADHYACMVDLLARSGLVTEALDLVKSMTVEPHG 460
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+WG+LL +CR HG+ E+A+ A + L LEP GNYVLLSN A G WD+ LR M
Sbjct: 461 GVWGALLGACRIHGNTEVAKIAAEHLFRLEPEGIGNYVLLSNTLASAGEWDEVSKLRKLM 520
Query: 463 RENNVKKSPGQSLIE 477
R +KK P S E
Sbjct: 521 RIRGLKKDPAVSWFE 535
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 264/483 (54%), Gaps = 43/483 (8%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
FL L+ A V+V G I +A +F+Q+ P ++N++I+ + +
Sbjct: 6 FLSDPSELRELLFASAVAVRGA---IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDA 62
Query: 85 VKLFALL----KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
V L+ + G+ PD+ TF +L+AC +G G VH ++++G E ++
Sbjct: 63 VSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNA 122
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ ++ SCG + +FD + D + + MI G ++GD+ LF E + +VSW
Sbjct: 123 LIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSW 182
Query: 201 NLMISSLGKSG--------------RDS-----------------EALRLFHEMRDQAFE 229
N+MI++ K G RD AL LF +M+ +
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK---VVSVGNALVDFYCKCGILDT 286
D T++++L CA G +D+GQ +HS S ++ + V +GNAL+D Y KCG + +
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHS--SLSDMFSRNGFPVVLGNALIDMYAKCGSMKS 300
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF + K+V +WN+++ GLA +G ++++E+M+ V P++ TFV VL C+H
Sbjct: 301 AHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSH 360
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
G+V+K RE F M + + PN++HYGCMVD+LGR+G ++EA++ I +M PN+ IW
Sbjct: 361 GGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWR 420
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LLS+CR HG +ELA+HA ++L+ SG+YVLLSNIYA G W +E +R M ++
Sbjct: 421 TLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSG 480
Query: 467 VKK 469
V K
Sbjct: 481 VNK 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 134/374 (35%), Gaps = 98/374 (26%)
Query: 19 TQIHAHFLRH-------------KLHQS--NLILA----------------HFVSVCGTL 47
Q+HAH ++ +H S NL +A ++ C
Sbjct: 102 VQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARR 161
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG------------PSEEPV---------- 85
+I A +F++ ++ +N MI AY+ G P + V
Sbjct: 162 GDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYV 221
Query: 86 ---------KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG- 135
+LF ++ +G PD T LL AC GDL VGQ +H + F R G
Sbjct: 222 RCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSS-LSDMFSRNGF 280
Query: 136 SIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ +G ++++Y CG M +VF M +DV
Sbjct: 281 PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDV--------------------------- 313
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+WN ++ L G E++ +F +M DE T VAVL C+ G VD G+
Sbjct: 314 ----STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGRE 369
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFN 312
+ + + +VD + G+L A + N V W ++S +
Sbjct: 370 FFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVH 429
Query: 313 GRGELGVELYEQMI 326
G EL Q++
Sbjct: 430 GEIELAKHANRQLL 443
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 246/438 (56%), Gaps = 9/438 (2%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP-------VKLFALLKNLGIWPD 99
N++ A K+F +M V+ +NS+I Y+ NG E +KLF + N PD
Sbjct: 163 FNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVN-QFKPD 221
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
T +L+AC +GDL G+ VH +I SG+E + ++ +Y CG + +VF
Sbjct: 222 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 281
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
M +D + N MI+ + + G + L +F M+ R +++WN +I+S S + LR+
Sbjct: 282 GMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 341
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
MR + D AT++++LP+C+ L A G+ IH GL V VGN L++ Y
Sbjct: 342 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL-ESDVPVGNVLIEMYS 400
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L + VFK + K+VV+W A+IS G G+ V + +M A G+ P+ FV
Sbjct: 401 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 460
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
++ C+H+GLVE+ F M + I P +EHY C+VD+L RS + +A D I SM ++
Sbjct: 461 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 520
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
P+++IWG+LLS+CR G E+AE + +I L P ++G YVL+SNIYA G+WD ++R
Sbjct: 521 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIR 580
Query: 460 MWMRENNVKKSPGQSLIE 477
++ +KK PG S +E
Sbjct: 581 KSIKARGLKKDPGCSWME 598
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 215/459 (46%), Gaps = 66/459 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I R L T T L ++H+ + LH S + A ++ + + +F ++ +PS
Sbjct: 19 ISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF-RLASPS 77
Query: 65 --VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
V L+NS+I+A + NG E + L++ + + + PD YTF ++ AC G+ D + + +
Sbjct: 78 NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 137
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++ GF I ++++Y +D KVF+EM RDV+ N +I G+ G
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
++ L ++ ++++LF EM +Q F+ D T+ ++L C
Sbjct: 198 NEALEIYY------------------------QSIKLFMEMVNQ-FKPDLLTITSILQAC 232
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
LG ++ G+++H Y +SG Y + N L++ Y KCG L ++ VF + K+ VSW
Sbjct: 233 GHLGDLEFGKYVHDYMITSG-YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 291
Query: 303 NAMISGLAFNGR-------------------------------GELGVELYEQMIAKGVS 331
N+MI+ NG+ LG+ + +M +GV+
Sbjct: 292 NSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 351
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
P+ AT + +L C+ + +E+ + GL S VP ++++ + G +R +
Sbjct: 352 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV---GNVLIEMYSKCGSLRNS 408
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ + + M + + W +L+S+C +G + A A E+
Sbjct: 409 FQVFKLMKTK-DVVTWTALISACGMYGEGKKAVRAFGEM 446
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/374 (39%), Positives = 226/374 (60%), Gaps = 4/374 (1%)
Query: 107 LKACLGVGDLR--VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L A + LR +G +H I+R+G + +++ Y SCG++ VFD+ + +
Sbjct: 74 LNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDK 133
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D+ N+MI G+ K G++ LF M R+VVSW +I + + + EA+ +F M+
Sbjct: 134 DIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQ 193
Query: 225 -DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
++ E D +++VL C LGAVD+G+W+H + GL ++ + NA++D Y K G
Sbjct: 194 VEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQI-PLMNAIIDMYVKLGC 252
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ A VF+ + +K+VV+W +I+G A +G G +E++ +M + V+PN TF+ +L+
Sbjct: 253 VRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSA 312
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H GL + R F M + I +EHYGCMVD+LGR+G + EA DL++ M + NAA
Sbjct: 313 CSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAA 372
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWG+LL++ RTHG EL + A+ LI LEP NSGNY+LLSNIYAE RWDD LR M+
Sbjct: 373 IWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMK 432
Query: 464 ENNVKKSPGQSLIE 477
+ ++ PG S IE
Sbjct: 433 DRGLRNVPGASSIE 446
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 136/340 (40%), Gaps = 64/340 (18%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H+ +R L + A + + + A +F+Q + + +N MI Y +G
Sbjct: 90 QLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVKSG 149
Query: 80 ------------PS----------------EEPVKLFALLKNL----GIWPDEYTFAPLL 107
P+ ++PV+ + + + GI PD +L
Sbjct: 150 NLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLSVL 209
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
AC +G + +G+ VH ++R G + ++++Y G + ++VF+ M + V+
Sbjct: 210 SACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQKSVV 269
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+I GF G GL EA+ +F M +
Sbjct: 270 TWTTVIAGFALHG---LGL----------------------------EAIEMFRRMEMEN 298
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
++ T +A+L C+ +G D+G+W S ++ V +VD + G L A
Sbjct: 299 VAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEA 358
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
+++ +++P K N W A+++ +G ELG + +I
Sbjct: 359 QDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLI 398
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A ++F M SV+ + ++I ++L+G E +++F ++ + P++ TF +L A
Sbjct: 253 VRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSA 312
Query: 110 CLGVGDLRVGQ-----CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
C VG +G+ V I+ E +G + V+L G + + + +M +
Sbjct: 313 CSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCM----VDLLGRAGYLMEAQDLVQDMPFK 368
Query: 165 -DVIVRNLMIHGFCKKGDVDKG---LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ + ++ GD + G L E+ + ++ L+ + + R + +L
Sbjct: 369 ANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLR 428
Query: 221 HEMRDQAF 228
+M+D+
Sbjct: 429 KQMKDRGL 436
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/426 (35%), Positives = 242/426 (56%), Gaps = 7/426 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVG 114
NQ + +++ + S I S +G E V+ F+ ++ GI P+ TF LL AC G
Sbjct: 13 LNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSG 72
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+G +HG + G ER + +G ++ +Y+ G + VFD + ++ + N M
Sbjct: 73 SEGLGYLLHGYACKLGLER-SHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTM 131
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ + G VD + +F +M +R ++SW MI+ K G EAL F EM+ D
Sbjct: 132 IDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDY 191
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+++ + C LGA+ G W+H Y S +R V V N+L+D YC+CG ++ AR VF
Sbjct: 192 VAIISAVAACTNLGALSFGLWVHRYVLSQD-FRNNVRVSNSLIDLYCRCGCVEFARQVFD 250
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
++ ++ VVSWN++I G A NG + + +M +G +P+ TF G LT C+H GLVE+
Sbjct: 251 KMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEE 310
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ F M + I P +EHYGC+VD+ R+G + +A+ ++ SM ++PN + GSLL++C
Sbjct: 311 GFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAAC 370
Query: 413 RTHG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
R HG H LAE +K + +L+ + NYV+LSN+YA G+W+ A +R M+ +KK P
Sbjct: 371 RNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 430
Query: 472 GQSLIE 477
G S IE
Sbjct: 431 GYSSIE 436
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+K + + + ++VSW I+ L + GR +EA+R F +MR E + T +A
Sbjct: 2 RKNHANPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIA 61
Query: 238 VLPICARL--GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+L C G+ +G +H YA GL R V VG A++ Y K G L AR VF I
Sbjct: 62 LLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIE 121
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
KN V+WN MI G NG+ + V+++++M + + ++ ++T G E+A
Sbjct: 122 DKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDL----ISWTAMITGFVKKGFHEEALA 177
Query: 356 LFASM 360
F M
Sbjct: 178 WFREM 182
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 34/317 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A +F++M + ++ + +MI + G EE + F ++ G+ PD +
Sbjct: 140 QVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVA 199
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F + +++LY CG ++ +VFD+M R V+
Sbjct: 200 ACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVS 259
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ ++ L FR+M+ + F
Sbjct: 260 WNSVIVGFAANGNANESLVYFRKMQR-------------------------------EGF 288
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
D T L C+ +G V+ G Q+ + ++ G LVD Y + G L+ A
Sbjct: 289 TPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYG-CLVDLYSRAGRLEDA 347
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
V + +P K N V ++++ +G + E + I + + +V + A
Sbjct: 348 FIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAA 407
Query: 347 AGLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 408 DGKWEGASKMRRKMKGL 424
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 272/508 (53%), Gaps = 45/508 (8%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
H N HL HA + L SN + +S ++ K+F+++ P+
Sbjct: 43 HALNQGKHL---HARLIVSGLASSNNFASKLISFYTETRQLSIVRKLFDRIPKPNFYQRT 99
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+I AYS +G ++ + +F+ ++N + P+++ +L+AC V DL+ G+ +H I+R
Sbjct: 100 VLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSVILRH 159
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
FE + ++++Y+ C ++ KVFD M +D++ N M+ G+ + G +G L
Sbjct: 160 LFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLV 219
Query: 190 REMR----ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD-------------- 231
+M+ + ++V+WN +IS ++G LF M FE D
Sbjct: 220 EQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQN 279
Query: 232 ---------------------EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
AT+ ++LP CA L V G+ +H YA + G+ + + V
Sbjct: 280 SHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGV-EEDIYV 338
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM-IAKG 329
+A+VD Y KCG++ AR +F ++P ++ V+WN+MI G A +G + +EL+ QM +
Sbjct: 339 RSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEA 398
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
+ +F VLT C+H LVE + LF M + IVP LEHY CM+D+LGR+G + EA
Sbjct: 399 KKIDHLSFTAVLTACSHGRLVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEA 458
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
YD+I++M + P+ +WG+LL +CR HG ++LAE A + L LEP N+GN +LLSN+YA+
Sbjct: 459 YDMIKTMPVEPDLFVWGALLGACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADA 518
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
G W++ L+M R+ ++K S I+
Sbjct: 519 GSWENVAKLKMGKRK-RLRKFSAYSWIQ 545
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 36/321 (11%)
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+TF L+K L G+ +H +I SG + ++ YT Q+ K+FD
Sbjct: 30 HTFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFASKLISFYTETRQLSIVRKLFDR 89
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ + R ++I + + G Y + L +F
Sbjct: 90 IPKPNFYQRTVLIGAYSR-----HGFY--------------------------QDVLDVF 118
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
EM+++ ++ + +VL C + + G+ +HS L+ V V AL+D Y +
Sbjct: 119 SEMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSVILRH-LFESDVVVNTALIDMYSR 177
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
C ++ AR VF + K++V+ NAM+ G A NG + G L EQM + PN T+ +
Sbjct: 178 CRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTL 237
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---S 397
++ A AG +ELF M+ +H P++ + ++ ++ A+ + M
Sbjct: 238 ISGFAQAGDKVMVQELFGLMS-MHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHG 296
Query: 398 IRPNAAIWGSLLSSCRTHGHV 418
PN+A SLL +C + +V
Sbjct: 297 AYPNSATISSLLPACASLANV 317
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 259/464 (55%), Gaps = 35/464 (7%)
Query: 17 HLTQI-HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL+ + HA + L+ + + +++ L++ A K+FN + + V+ +N+M+KAY
Sbjct: 145 HLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAY 204
Query: 76 SLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G + E ++ ++K+ + P+ T A +L AC GDL +G+ V +G E
Sbjct: 205 GRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETD 264
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +V +Y CG++ + +VFD + +DV
Sbjct: 265 SLVGSALVGMYEKCGEIAEARRVFDSIIDKDV---------------------------- 296
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
V+WN MI+ ++G +EA+ LFH M+ D+ T+ VL C+ +GA+++G +
Sbjct: 297 ---VAWNAMITGYAQNGMSNEAISLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSEL 353
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
YA GLY V VG ALVD Y KCG LD A VF+++ KNV SWNA+I GLAFNG+
Sbjct: 354 DGYASCRGLYNNVY-VGTALVDMYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQ 412
Query: 315 GELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G+ ++ +E M + G+ P+ TF+GVL+ C HAGLV+ + F S+T I+P +EHY
Sbjct: 413 GDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHY 472
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
CMVD+L RSG + E +D I + + +A + G+LL++CR +VE+ E + +I LEP
Sbjct: 473 SCMVDLLARSGHLEEVWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEP 532
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NS NYV+ S IYA GR DD+ +R MRE V K+PG S +E
Sbjct: 533 TNSWNYVVSSKIYASSGRLDDSAKMRGPMRERGVNKTPGCSWVE 576
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 251/464 (54%), Gaps = 44/464 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFV----SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+H ++ L QSN+ +A+ + CG L E A +F +M + + +N++I A+
Sbjct: 334 QVHGLSMK-SLCQSNICVANAILDMYGKCGALVE---ACLVFEEMVSRDAVSWNAIIAAH 389
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS--GFER 133
NG E+ + LF + G+ PDE+T+ +LKAC G L G +H II+S G +
Sbjct: 390 EQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDS 449
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
F + I ++++Y+ CG M+ K+ D ++
Sbjct: 450 F--VGIALIDMYSKCGMMEKAEKLHDRLA------------------------------- 476
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E++VVSWN +IS + EA + F +M + + D T +L CA L V++G+
Sbjct: 477 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 536
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IH+ L + + LVD Y KCG + + +F++ P ++ V+WNAM+ G A +G
Sbjct: 537 IHAQIIKKELQSDAY-ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 595
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
GE ++++E M + V PN ATF+ VL C H GLVEK F SM + + P LEHY
Sbjct: 596 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 655
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
C+VD++GRSG V +A +LI M +A IW +LLS C+ HG+VE+AE A ++ LEP
Sbjct: 656 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEP 715
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+S YVLLSNIYA G W++ LR MR N +KK PG S IE
Sbjct: 716 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIE 759
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 46/436 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H L+ +I + + C L++ + ++FN + N ++ +N++I Y+
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDC--SNQLFNSLPNHNLQSYNAIIVGYA 289
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFG 135
+ E + +F LL+ G+ DE + + +AC + GDL G VHG ++S +
Sbjct: 290 RSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE-GLQVHGLSMKSLCQSNI 348
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++++Y CG + + VF+EM RD +
Sbjct: 349 CVANAILDMYGKCGALVEACLVFEEMVSRDAV---------------------------- 380
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
SWN +I++ ++G + + L LF M E DE T +VL CA A++ G IH
Sbjct: 381 ---SWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 437
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ S + VG AL+D Y KCG+++ A + + + VVSWNA+ISG + +
Sbjct: 438 NRIIKSRMGLDSF-VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 496
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E + + +M+ GV P+ T+ +L CA+ VE +++ A + + +
Sbjct: 497 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISST 555
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK--ELINLEP 433
+VD+ + G +++ + LI + + W +++ HG L E A+K E + LE
Sbjct: 556 LVDMYSKCGNMQD-FQLIFEKAPNRDFVTWNAMVCGYAQHG---LGEEALKIFEYMQLEN 611
Query: 434 WNSGNYVLLSNIYAEG 449
+ L+ + A G
Sbjct: 612 VKPNHATFLAVLRACG 627
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 195/457 (42%), Gaps = 55/457 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q HA + + + + + + +++ +A K+F+ M + +N+M+ Y+ G
Sbjct: 63 QAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRG 122
Query: 80 PSEEPVKLFALLKN---------------LGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
KLF + +G D TFA +LK+C + D G +HG
Sbjct: 123 DIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 182
Query: 125 EIIRSGFERFGSIRIGVVELYTSCG-QMDD---GMKVFDEMSHRDVIVRNLMIHGFCKKG 180
++ GF+ ++++Y C Q DD G+++F EM + V L +HG K
Sbjct: 183 LAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM--QKAGVGALQLHGHALKT 240
Query: 181 DV---------------------DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
D D LF + ++ S+N +I +S + EAL +
Sbjct: 241 DFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGM 300
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F ++ LDE ++ CA + G +H + S L + + V NA++D Y
Sbjct: 301 FRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKS-LCQSNICVANAILDMYG 359
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L A VF+E+ ++ VSWNA+I+ NG E + L+ M+ G+ P++ T+
Sbjct: 360 KCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGS 419
Query: 340 VLTCCA-----HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
VL CA + G+ E + S GL S V ++D+ + G + +A L
Sbjct: 420 VLKACAGWQALNCGM-EIHNRIIKSRMGLDSFVGI-----ALIDMYSKCGMMEKAEKLHD 473
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
++ W +++S E A+ +++ +
Sbjct: 474 RLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 509
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 151/357 (42%), Gaps = 43/357 (12%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
TF+ + + C L G+ H +I + F+ + ++++Y C + KVFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG----RDSEA- 216
RD + N M+ G+ +GD+ LF M L +G+ G R + A
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV 163
Query: 217 -LRLFHEMRDQ-------------AFELDEATVVAVLPICARL--------GAVDIGQ-- 252
L+ + D F+ D T A+L + A+ G +++ +
Sbjct: 164 VLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEM 223
Query: 253 --------WIHSYAESSGLYRKVVSVGNALVDFYCKCGIL-DTARNVFKEIPRKNVVSWN 303
+H +A + VV +G A +D Y KC L D + +F +P N+ S+N
Sbjct: 224 QKAGVGALQLHGHALKTDFGTDVV-IGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYN 282
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH-AGLVEKARELFASMTG 362
A+I G A + +G + ++ + G+ ++ + G CA G +E + SM
Sbjct: 283 AIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKS 342
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
L N+ ++D+ G+ G + EA + M R +A W +++++ +G+ E
Sbjct: 343 L--CQSNICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQNGNEE 396
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 238/458 (51%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ H + +L +++ + A ++F++M +PS + + ++I AY G
Sbjct: 139 QLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAG 198
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V + G+ PD +T +L AC V DL G+ V + G + +
Sbjct: 199 DLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVAT 258
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+LY CG+M +VFD+ MR++ V+
Sbjct: 259 AAVDLYVKCGEMAKAREVFDK-------------------------------MRDKDAVA 287
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W M+ +G EAL LF M+ + D V L C RLGA+D+G+ +
Sbjct: 288 WGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVD 347
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V +G AL+D Y KCG A VF+++ +K+++ WNAMI GL G +
Sbjct: 348 WDEFLDNPV-LGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAF 406
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L QM GV N TF+G+L C H GL++ R F +MT L+ I P +EHYGC+VD+
Sbjct: 407 TLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDL 466
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G ++EA+ LI M + NA I G+LL C+ H + ELAEH + +LI LEPWNSGNY
Sbjct: 467 LSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNY 526
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIY+ GRW+DA LR+ M+E V+K P S +E
Sbjct: 527 VMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVE 564
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 241/460 (52%), Gaps = 33/460 (7%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-SVLLFNSMIKAYSL 77
Q+HA L+ H + +L +++ + A K F++MR P S + + ++I AY
Sbjct: 95 AQLHARSLKLPSHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQPPSTVSWTALITAYMD 154
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G E + + G+ PD +T +L AC V DL G+ V + G +
Sbjct: 155 AGRGLEAIGVARSAFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFV 214
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
V+LY CG+M DK +F +M+ + V
Sbjct: 215 ATAAVDLYVKCGEM-------------------------------DKARGVFDKMKNKDV 243
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W M+ +G EAL LF M+ + D TV L C RLGA+D+G+ +
Sbjct: 244 VAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSACTRLGALDLGRRVVGM 303
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + V +G AL+D Y KCG A VF+++ ++++ WNAMI GL G ++
Sbjct: 304 LQWDEVLGNPV-LGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKI 362
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
L QM G++ N TF+G+L C H GLV+ R F +MT L+ I P +EHYG MV
Sbjct: 363 AFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMV 422
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+L R+G ++EA+ LI+ M + NA +WG+LL C+ H + +LAEH +K+LI LEPWNSG
Sbjct: 423 DLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNADLAEHVLKQLIQLEPWNSG 482
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV+LSNIY+ GRW+DA LR+ M+ V+K P S +E
Sbjct: 483 NYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASSWVE 522
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 239/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A K+F+++ V+ +N+MI Y +E ++L+ + + PDE T ++ A
Sbjct: 147 INNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSA 206
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ +H I GF I +++LY+ CG+
Sbjct: 207 CAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE------------------- 247
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+ LF+ + ++ V+SWN +I EAL LF EM
Sbjct: 248 ------------VETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES 295
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T+++VLP CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 296 PNDVTMLSVLPACAHLGAIDIGRWIHVY-----INKRLKGVTNASSLLTSLIDMYAKCGD 350
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ VF + +++ SWNAMI G A +G+ +L+ +M G+ P+ TFVG+L+
Sbjct: 351 IEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSA 410
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SM+ + I P LEHYGCM+D+LG G +EA ++IR+M + P+
Sbjct: 411 CSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGV 470
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ H +VEL E + LI +EP N G+YVLLSNIYA GRWD +R +
Sbjct: 471 IWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLN 530
Query: 464 ENNVKKSPGQSLIE 477
+ +KK+PG S IE
Sbjct: 531 DKGIKKAPGCSSIE 544
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 218/427 (51%), Gaps = 36/427 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L F + + + YA IF ++ P++L++N+M + ++LN S +KL+ + +LG+
Sbjct: 2 LIEFSVLSPHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGL 61
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ Y+F LLK+C L GQ +HG +++ G++ + ++ +Y G+++D K
Sbjct: 62 LPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHK 121
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD SHR V+ +I G+ +G ++ LF E+ + VVSWN MIS ++ EA
Sbjct: 122 VFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEA 181
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L+ +M + DE+T+V V+ CA+ G++++G+ +HS+ E G + + + N L+D
Sbjct: 182 LELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG-FGSNIKIVNVLID 240
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG ++TA +F+ + +K+V+SWN +I G + + L+++M+ G SPN T
Sbjct: 241 LYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVT 300
Query: 337 FVGVLTCCAHAGLVE-----------------KARELFASMTGLHS-------------- 365
+ VL CAH G ++ A L S+ +++
Sbjct: 301 MLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDS 360
Query: 366 -IVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELA 421
+ +L + M+ G A+DL M I P+ + LLS+C G ++L
Sbjct: 361 MLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 420
Query: 422 EHAVKEL 428
H + +
Sbjct: 421 RHIFRSM 427
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 255/448 (56%), Gaps = 21/448 (4%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +L FV +I A + F+ M+ V+ +N++I Y+ NG +E +LF +
Sbjct: 218 NCLLGGFVKK----KKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLF----D 269
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI----GVVELYTSCG 149
D +T+ ++ + Q E R F+R ++ Y
Sbjct: 270 ESPVHDVFTWTAMVSGYI--------QNRMVEEARELFDRMPERNEVSWNAMLAGYVQGE 321
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+++ ++FD M R+V N MI G+ + G + + LF +M +R VSW MI+ +
Sbjct: 322 RVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQ 381
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
SG EALRLF M + L+ ++ + L CA + A+++G+ +H G Y
Sbjct: 382 SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCF 440
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
VGNAL+ YCKCG ++ A ++FKE+ K++VSWN MI+G + +G GE + +E M +G
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG 500
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
+ P+ AT V VL+ C+H GLV+K R+ F +MT + + PN +HY CMVD+LGR+G + EA
Sbjct: 501 LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEA 560
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
++L+++M P+AAIWG+LL + R HG+ ELAE A ++ +EP NSG YVLLSN+YA
Sbjct: 561 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 620
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRW D LR+ MR+ VKK PG S IE
Sbjct: 621 GRWGDVGKLRVRMRDKGVKKVPGYSWIE 648
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 33/325 (10%)
Query: 116 LRVGQCVHGEIIRSGFERFGSIRI-GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+R G+C + R+ S+ ++ Y G+ + +FDEM RD++ N+MI
Sbjct: 70 MRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIK 129
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD--------- 225
G+ + ++ K LF M ER V SWN ++S ++G +A R+F M +
Sbjct: 130 GYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNAL 189
Query: 226 -----QAFELDEATVV--------AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
Q +L+EA V+ V C G V + + + + + V N
Sbjct: 190 LSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWN 249
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
++ Y + G +D AR +F E P +V +W AM+SG N E EL+++M +
Sbjct: 250 TIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER---- 305
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ ++ +L VE A+ELF M N+ + M+ + G + EA +L
Sbjct: 306 NEVSWNAMLAGYVQGERVEMAKELFDVMP-----CRNVSTWNTMITGYAQCGKISEAKNL 360
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH 417
M R + W ++++ GH
Sbjct: 361 FDKMPKR-DPVSWAAMIAGYSQSGH 384
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 40/319 (12%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y G+ + ++VF M + N MI G+ + G+ + LF EM ER +VSW
Sbjct: 65 AISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSW 124
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-------- 252
N+MI ++ +A LF M E D + +L A+ G VD +
Sbjct: 125 NVMIKGYVRNRNLGKARELFERMP----ERDVCSWNTILSGYAQNGCVDDARRVFDRMPE 180
Query: 253 -----W---IHSYAESSGLYRKVVSVGN----ALVDFYCKCG------ILDTARNVFKEI 294
W + +Y ++S L V G+ ALV + C G + AR F +
Sbjct: 181 KNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSM 240
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
++VVSWN +I+G A NG + +L+++ V T+ +++ +VE+AR
Sbjct: 241 KVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDV----FTWTAMVSGYIQNRMVEEAR 296
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
ELF M + + + M+ + V A +L M R N + W ++++
Sbjct: 297 ELFDRMPERNEV-----SWNAMLAGYVQGERVEMAKELFDVMPCR-NVSTWNTMITGYAQ 350
Query: 415 HGHVELAEHAVKELINLEP 433
G + A++ ++ +P
Sbjct: 351 CGKISEAKNLFDKMPKRDP 369
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 19/234 (8%)
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+ + WN+ ISS ++GR SEALR+F M + A++ R G ++ +
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMP----RWSSVSYNAMISGYLRNGEFELARM 111
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+ R +VS N ++ Y + L AR +F+ +P ++V SWN ++SG A NG
Sbjct: 112 LFDEMPE----RDLVS-WNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNG 166
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ ++++M K N ++ +L+ +E+A LF S L +
Sbjct: 167 CVDDARRVFDRMPEK----NDVSWNALLSAYVQNSKLEEACVLFGSRENWA-----LVSW 217
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
C++ + + EA SM +R + W ++++ +G ++ A E
Sbjct: 218 NCLLGGFVKKKKIVEARQFFDSMKVR-DVVSWNTIITGYAQNGEIDEARQLFDE 270
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/438 (34%), Positives = 254/438 (57%), Gaps = 8/438 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYT 102
CG + A F + ++ +NSMI + +G E ++ F+ +LK+ + PD ++
Sbjct: 186 CG---RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFS 242
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE-- 160
A L AC + L G+ +HG I+R+ F+ G++ ++ +Y G ++ ++ ++
Sbjct: 243 LASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSG 302
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+S DVI +++G+ K GD+ +F +++ VV+W MI ++G +++A+ +F
Sbjct: 303 ISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVF 362
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M + + T+ A+L + + +++ G+ IH+ A SG SVGNAL Y K
Sbjct: 363 KTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSP-SVGNALTTMYAK 421
Query: 281 CGILDTARNVFKEIPR-KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G ++ AR VF + + ++ VSW +MI LA +G GE +EL+EQM+ G+ P+ T+VG
Sbjct: 422 AGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVG 481
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ C H GLVE+ R F M +H I P L HY CMVD+ GR+G ++EAY + +M +
Sbjct: 482 VLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPME 541
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
P+ WGSLLSSC+ + +V+LA+ A + L+ +EP NSG Y L+N+Y+ G+WDDA +R
Sbjct: 542 PDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIR 601
Query: 460 MWMRENNVKKSPGQSLIE 477
M+ VKK G S ++
Sbjct: 602 KLMKARGVKKEQGLSWVQ 619
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 190/420 (45%), Gaps = 42/420 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+++ A ++F+ + + + ++I Y+ G E+ +K+F + + P ++T +L
Sbjct: 56 KLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLA 115
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+C G +G+ VH +++ G + ++ +Y G + VFD M R+
Sbjct: 116 SCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSS 175
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE-MRDQA 227
N MI G VD L F + ER +VSWN MI+ + G D+EAL+ F ++D +
Sbjct: 176 WNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTS 235
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSY------------------------------ 257
+ D ++ + L CA L + G+ IH Y
Sbjct: 236 LKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIAR 295
Query: 258 --AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
E SG+ V AL++ Y K G + AR +F + +VV+W AMI G NG
Sbjct: 296 RIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLN 355
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS-MTGLHSIVPNLEHYG 374
+E+++ M+++G PN T +L+ + + +++ AS + ++ P++ +
Sbjct: 356 NDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN-- 413
Query: 375 CMVDVLGRSGCV---REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+ + ++G + R+ ++L+R + W S++ + HG E A ++++ L
Sbjct: 414 ALTTMYAKAGSINGARKVFNLLRQ---NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTL 470
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G D +F+EM + N ++ G+ K+G ++K +F + R VSW
Sbjct: 16 LMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSW 75
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+I + GR +A+++F +M + T+ VL CA G+ IG+ +HS+
Sbjct: 76 TTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVK 135
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
GL+ V V N+L++ Y K G L A+ VF + +N SWNAMIS GR +L +
Sbjct: 136 LGLH-ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALA 194
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV- 379
+E + + + + G C G +A + F+S+ S+ P+ +
Sbjct: 195 QFELLSERDIVSWNSMIAG----CNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSAC 250
Query: 380 --LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
L + ++ + I + A+ +L+S G VE+A +++
Sbjct: 251 ANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 41/201 (20%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA--------------------- 310
N L++ Y K G A ++F E+P K SWN ++SG A
Sbjct: 14 NNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSV 73
Query: 311 --------FN--GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL--VEKARELFA 358
+N GR E ++++ M+ V P + T VL CA G + K F
Sbjct: 74 SWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFV 133
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
GLH+ VP ++++ ++G ++ A + M +R N + W +++S G V
Sbjct: 134 VKLGLHACVPVAN---SLLNMYAKTGDLKMAKVVFDRMKLR-NTSSWNAMISLHMNCGRV 189
Query: 419 ELAEHAVKELI---NLEPWNS 436
+LA A EL+ ++ WNS
Sbjct: 190 DLAL-AQFELLSERDIVSWNS 209
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 251/473 (53%), Gaps = 32/473 (6%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+L G + L +IH + RH + L+ FV+ + + A ++F M +
Sbjct: 407 VLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKT 466
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
V +N++I A++ NG + + LF ++ + G+ PD +T LL AC + LR G+ +HG
Sbjct: 467 VSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHG 526
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++R+G E I I ++ LY C M G +FD+M ++
Sbjct: 527 FMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK-------------------- 566
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
S+V WN+MI+ ++ EAL F +M + E V VL C++
Sbjct: 567 -----------SLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQ 615
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+ A+ +G+ +HS+A + L V AL+D Y KCG ++ ++N+F + K+ WN
Sbjct: 616 VSALRLGKEVHSFALKAHLSEDAF-VTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNV 674
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
+I+G +G G +EL+E M KG P+ TF+GVL C HAGLV + + M L+
Sbjct: 675 IIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLY 734
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
+ P LEHY C+VD+LGR+G + EA L+ M P++ IW SLLSSCR +G +E+ E
Sbjct: 735 GVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEV 794
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K+L+ LEP + NYVLLSN+YA G+WD+ +R M+EN + K G S IE
Sbjct: 795 SKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIE 847
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 41/336 (12%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ H +H LR+ + S I+A + S CG+ ++ + +F+ + + L+N+++
Sbjct: 113 KVHALVSASHKLRNDVVLSTRIIAMY-SACGSPSD---SRGVFDAAKEKDLFLYNALLSG 168
Query: 75 YSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
YS N + + LF LL + PD +T + KAC GV D+ +G+ VH +++G
Sbjct: 169 YSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAG--- 225
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
D V N +I + K G V+ + +F MR
Sbjct: 226 ----------------------------GFSDAFVGNALIAMYGKCGFVESAVKVFETMR 257
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEM---RDQAFELDEATVVAVLPICARLGAVDI 250
R++VSWN ++ + ++G E +F + ++ D AT+V V+P CA +G V +
Sbjct: 258 NRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRM 317
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G +H A G+ +V +V N+LVD Y KCG L AR +F KNVVSWN +I G +
Sbjct: 318 GMVVHGLAFKLGITEEV-TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYS 376
Query: 311 FNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCA 345
G EL ++M + V N+ T + VL C+
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 158/343 (46%), Gaps = 34/343 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA L+ + +++ G ++ A K+F MRN +++ +NS++ A S NG
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 81 SEEPVKLFALL---KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
E +F L + G+ PD T ++ AC VG++R+G VHG + G ++
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+V++Y+ CG + + +FD ++V+ N +I G+ K+GD L +EM+
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ---- 392
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
R++ ++E TV+ VLP C+ + + IH Y
Sbjct: 393 --------------------------REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGY 426
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
A G + + V NA V Y KC LD A VF + K V SWNA+I A NG
Sbjct: 427 AFRHGFLKDEL-VANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGK 485
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++L+ M+ G+ P++ T +L CA + +E+ M
Sbjct: 486 SLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 44/385 (11%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL-- 94
L S CG L E A +F+ +V+ +N++I YS G +F LL+ +
Sbjct: 340 LVDMYSKCGYLGE---ARALFDMNGGKNVVSWNTIIWGYSKEGDFR---GVFELLQEMQR 393
Query: 95 --GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+ +E T +L AC G L + +HG R GF +
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLK------------------- 434
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
D +V N + + K +D +F M ++V SWN +I + ++G
Sbjct: 435 ------------DELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGF 482
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
++L LF M D + D T+ ++L CARL + G+ IH + +GL +G
Sbjct: 483 PGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEF-IGI 541
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+L+ Y +C + + +F ++ K++V WN MI+G + N ++ + QM++ G+ P
Sbjct: 542 SLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
+ GVL C+ + +E+ + H + + ++D+ + GC+ ++ ++
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQNI 660
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH 417
++ + A+W +++ HGH
Sbjct: 661 FDRVN-EKDEAVWNVIIAGYGIHGH 684
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 15/222 (6%)
Query: 204 ISSLGKSGRDSEALRLFHEMRDQ----AFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+ +L SG ++AL L H + ++ + + +L C + +G+ +H+
Sbjct: 60 LHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVS 119
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+S R V + ++ Y CG +R VF K++ +NA++SG + N +
Sbjct: 120 ASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAI 179
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVE--KARELFASMTGLHS--IVPNLEHYG 374
L+ +++ A ++P+ T V CA VE +A A G S V N
Sbjct: 180 SLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGN----- 234
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
++ + G+ G V A + +M R N W S++ +C +G
Sbjct: 235 ALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYACSENG 275
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 244/431 (56%), Gaps = 5/431 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +NE + ++F++ N V+L+NSMI Y N E + LF ++N W D T
Sbjct: 246 CGRVNE---SRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRN-ETWEDSRTL 301
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A ++ AC+G+G L G+ +H + G + ++++Y+ CG + K+F E+
Sbjct: 302 AAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVES 361
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D I+ N MI + G +D +F + +S++SWN M + ++G E L F +M
Sbjct: 362 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQM 421
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
DE ++ +V+ CA + ++ +G+ + + A GL + V ++L+D YCKCG
Sbjct: 422 HKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQI-VSSSLIDLYCKCGS 480
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ R VF + + + V WN+MISG A NG G ++L+++M G+ P + TF+ VLT
Sbjct: 481 VENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTA 540
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C + GLVE+ R LF +M H VP+ EH+ CMVD+L R+G V EA DL+ M +A+
Sbjct: 541 CNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADAS 600
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W S+L C +G+ + + +++I LEP NS YV LS I+A G W+ + +R MR
Sbjct: 601 MWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 660
Query: 464 ENNVKKSPGQS 474
ENNV K+PG S
Sbjct: 661 ENNVSKNPGSS 671
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 198/419 (47%), Gaps = 50/419 (11%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N++++ F E+ A ++F+ M V+ NS++ Y LNG SEE ++LF K
Sbjct: 108 NVVISGFAKA----GELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLF---KE 160
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
L D T +LKAC + L+ G+ +H +I+ G E + +V +Y CG +
Sbjct: 161 LKFSADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 220
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+ +++ D + +I G+ G V++ LF R V+ WN MIS +
Sbjct: 221 ASYMLEQIGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMK 280
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LF+EMR++ +E D T+ AV+ C LG ++ G+ +H +A GL +V V +
Sbjct: 281 FEALVLFNEMRNETWE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIV-VAST 338
Query: 274 LVDFYCKCGI-------------------------------LDTARNVFKEIPRKNVVSW 302
L+D Y KCG +D A+ VF+ I K+++SW
Sbjct: 339 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 398
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT- 361
N+M +G + NG +E + QM + ++ + V++ CA + ++FA T
Sbjct: 399 NSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATI 458
Query: 362 -GLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
GL S IV + ++D+ + G V + +M ++ + W S++S T+GH
Sbjct: 459 VGLDSDQIVSS-----SLIDLYCKCGSVENGRRVFDTM-VKSDEVPWNSMISGYATNGH 511
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 168/414 (40%), Gaps = 79/414 (19%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI---GVVELYTSCGQMDDGMKVFD 159
+ LL++C + + +G ++ GF SI I ++++Y+ G+M +FD
Sbjct: 9 YVRLLQSCSNRNRETLWRQTNGLFLKKGF--ISSIVIVANHLLQIYSRSGKMGIARNLFD 66
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS----- 214
EM R+ N MI G+ GD L F M ER SWN++IS K+G S
Sbjct: 67 EMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRL 126
Query: 215 --------------------------EALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
EALRLF E++ F D T+ VL CA L A+
Sbjct: 127 FDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELK---FSADAITLTTVLKACAELEAL 183
Query: 249 DIGQWIHS--------------------YAESSGLYRK---VVSVG-------NALVDFY 278
G+ IH+ YA+ L + +G + L+ Y
Sbjct: 184 KRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGY 243
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
CG ++ +R +F + V+ WN+MISG N + L+ +M + ++ T
Sbjct: 244 ANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWEDSR-TLA 302
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
V+ C G +E +++ +V ++ ++D+ + G EA L +
Sbjct: 303 AVINACIGLGFLETGKQMHCHACKF-GLVDDIVVASTLLDMYSKCGSPMEACKLFSEVE- 360
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYAEGG 450
+ + S++ + G ++ A+ + + N L WNS ++N +++ G
Sbjct: 361 SYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS-----MTNGFSQNG 409
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+ A L ++ + + + ++ ++F+ M + +NSMI Y+ NG
Sbjct: 451 QVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNG 510
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-IRSGF----ERF 134
E + LF + GI P + TF +L AC G + G+ + + + GF E F
Sbjct: 511 HGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHF 570
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEM 161
+ V+L G +++ + + +EM
Sbjct: 571 SCM----VDLLARAGYVEEAIDLVEEM 593
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 239/458 (52%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ H + +L +S+ + A ++F++M +PS + + ++I AY G
Sbjct: 547 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 606
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V + G+ PD +T +L AC + DL G+ V + G + +
Sbjct: 607 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 666
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+LY CG+M +VFD +MR + V+
Sbjct: 667 AAVDLYVKCGEMAKAREVFD-------------------------------KMRHKDAVA 695
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W M+ +G EAL LF M+ + + D V L C RLGA+D+G+ +
Sbjct: 696 WGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVD 755
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V +G AL+D Y KCG A VF+++ +K+++ WNAMI GL G ++
Sbjct: 756 WDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 814
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L QM GV N TF+G+L C H GL++ R F +MT L+ I P +EHYGCMVD+
Sbjct: 815 ALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDL 874
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G ++EA+ L+ M + NA I G+LL C+ H + ELAEH +K+LI LEPWNSGNY
Sbjct: 875 LSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNY 934
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIY+ GRW+DA LR+ M+ V+K P S +E
Sbjct: 935 VMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 972
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 251/464 (54%), Gaps = 44/464 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFV----SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+H ++ L QSN+ +A+ + CG L E A +F +M + + +N++I A+
Sbjct: 397 QVHGLSMK-SLCQSNICVANAILDMYGKCGALVE---ACLVFEEMVSRDAVSWNAIIAAH 452
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS--GFER 133
NG E+ + LF + G+ PDE+T+ +LKAC G L G +H II+S G +
Sbjct: 453 EQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDS 512
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
F + I ++++Y+ CG M+ K+ D ++
Sbjct: 513 F--VGIALIDMYSKCGMMEKAEKLHDRLA------------------------------- 539
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
E++VVSWN +IS + EA + F +M + + D T +L CA L V++G+
Sbjct: 540 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 599
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IH+ L + + LVD Y KCG + + +F++ P ++ V+WNAM+ G A +G
Sbjct: 600 IHAQIIKKELQSDAY-ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
GE ++++E M + V PN ATF+ VL C H GLVEK F SM + + P LEHY
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 718
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
C+VD++GRSG V +A +LI M +A IW +LLS C+ HG+VE+AE A ++ LEP
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEP 778
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+S YVLLSNIYA G W++ LR MR N +KK PG S IE
Sbjct: 779 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIE 822
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 200/434 (46%), Gaps = 41/434 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+Q+H H L+ +I + + N + A K+FN + N ++ +N++I Y+ +
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFGSI 137
E + +F LL+ G+ DE + + +AC + GDL G VHG ++S + +
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQSNICV 413
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG + + VF+EM RD +
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAV------------------------------ 443
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
SWN +I++ ++G + + L LF M E DE T +VL CA A++ G IH+
Sbjct: 444 -SWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
S L VG AL+D Y KCG+++ A + + + VVSWNA+ISG + + E
Sbjct: 503 IIKSRLGLDSF-VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEE 561
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ + +M+ GV P+ T+ +L CA+ VE +++ A + + + +V
Sbjct: 562 AQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQSDAYISSTLV 620
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK--ELINLEPWN 435
D+ + G +++ + LI + + W +++ HG L E A+K E + LE
Sbjct: 621 DMYSKCGNMQD-FQLIFEKAPNRDFVTWNAMVCGYAQHG---LGEEALKIFEYMQLENVK 676
Query: 436 SGNYVLLSNIYAEG 449
+ L+ + A G
Sbjct: 677 PNHATFLAVLRACG 690
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 122/244 (50%), Gaps = 1/244 (0%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
TF+ + + C L G+ H +I + F+ + ++++Y C ++ KVFD M
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
RD + N M+ G+ +GD+ LF M ER VVSWN +IS +G + + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
+M D T VL C+ L G IH A G VV+ G+AL+D Y KC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVT-GSALLDMYAKC 222
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
LD + F +P KN VSW+A+I+G N G+EL+++M GV +++TF V
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282
Query: 342 TCCA 345
CA
Sbjct: 283 RSCA 286
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 172/372 (46%), Gaps = 36/372 (9%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+I A K+F+ M V+ +NS+I Y NG + + +F + +G D TFA +LK
Sbjct: 123 DIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLK 182
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+C + D G +HG ++ GF+ ++++Y C ++D ++ F M ++ +
Sbjct: 183 SCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVS 242
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+ +I G + D+ GL LF+EM++ V
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGV------------------------------- 271
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ ++T +V CA L A+ +G +H +A + VV +G A +D Y KC L A+
Sbjct: 272 GVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVV-IGTATLDMYMKCNNLSDAQ 330
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH-A 347
+F +P N+ S+NA+I G A + +G + ++ + G+ ++ + G CA
Sbjct: 331 KLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIK 390
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G +E + SM L N+ ++D+ G+ G + EA + M R +A W +
Sbjct: 391 GDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNA 447
Query: 408 LLSSCRTHGHVE 419
++++ +G+ E
Sbjct: 448 IIAAHEQNGNEE 459
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
QA + T + C+ A+ G+ H+ + ++ V V N L+ Y KC L+
Sbjct: 36 QATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTE-FKPTVFVTNCLIQMYIKCSDLE 94
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV--ELYEQMIAKGVSPNKATFVGVLTC 343
A VF +P+++ VSWNAM+ G A GRG++GV +L++ M + V + G L
Sbjct: 95 FAFKVFDGMPQRDTVSWNAMLFGYA--GRGDIGVAQKLFDAMPERDVVSWNSLISGYL-- 150
Query: 344 CAHAGLVEKARELFASM 360
H G K ++F M
Sbjct: 151 --HNGDHRKVIDVFLQM 165
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 273/542 (50%), Gaps = 74/542 (13%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + L QIHA L L S ++ + + +I +A ++F+ + P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I+ YS N ++ + +++ ++ + PD +TF LLKAC G+ L++G+ VH ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 128 RSGFE-----------------RFGSIRI----------------GVVELYTSCGQMDDG 154
R GF+ R GS R +V Y G+ +
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 155 MKVFDEMSHRDV-------------------IVRNLMIHG-------------------- 175
+++F +M DV + + IH
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G V LF +M+ +++ WN MIS K+G EA+ +FHEM ++ D ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ + CA++G+++ + ++ Y S YR V + +AL+D + KCG ++ AR VF
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++VV W+AMI G +GR + LY M GV PN TF+G+L C H+G+V +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +HY C++D+LGR+G + +AY++I+ M ++P +WG+LLS+C+ H
Sbjct: 446 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
HVEL E+A ++L +++P N+G+YV LSN+YA WD +R+ M+E + K G S
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 476 IE 477
+E
Sbjct: 565 VE 566
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 268/542 (49%), Gaps = 67/542 (12%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ- 59
+ER+ L LL TR L QIHA LR+ + + IL F++ CG L+ ++A +F+
Sbjct: 1 MERECLFLLQRCRTRKTLLQIHALILRNAIDANVNILTKFITTCGQLSSTRHARHLFDNR 60
Query: 60 ------------------MRN------------------PSVLLFNSMIKAYSLNGPSEE 83
MR P F + K +L E
Sbjct: 61 SHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRRETCFVPDNFTFTVLAKCCALRMAVWE 120
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI----------IRSGFER 133
++ + +G D Y L+ G+L + + V ++ + G+ R
Sbjct: 121 GLETHGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFNDMPDRSLVSWTALIGGYVR 180
Query: 134 FGSIRIG-----------------VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G + +++ Y G M+ +FDEM R+VI MI+G+
Sbjct: 181 RGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSLFDEMPERNVISWTSMIYGY 240
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATV 235
C GDV +LF M E+++VSWN MI ++ + EAL+LF E++ FE +E TV
Sbjct: 241 CNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEALKLFRELQSSTVFEPNEVTV 300
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V++LP A LGA+++G+W+H + + L V+V +LVD Y KCG + AR VF EIP
Sbjct: 301 VSILPAIATLGALELGEWVHRFVQRKKL-DAAVNVCTSLVDMYLKCGEISKARKVFSEIP 359
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+K +WNA+I+G A NG +E + +M +G+ PN T GVL+ C+H GLVE+ +
Sbjct: 360 KKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPNDITMTGVLSACSHGGLVEEGKG 419
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F +M + P +EHYGC+VD+LGR+GC+ EA +LI+SM N I S +C
Sbjct: 420 QFKAMIE-SGLSPKIEHYGCLVDLLGRAGCLDEAENLIKSMPFEANGIILSSFSFACGFS 478
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
V A+ + + +N+EP N+G YV++ N+YA RW D + + MR KK G S
Sbjct: 479 NDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWKDVKEINGLMRRRGAKKEVGSSA 538
Query: 476 IE 477
IE
Sbjct: 539 IE 540
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 249/433 (57%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A +F ++ +++N+MI Y +G + E +LF + + DE+TF +L
Sbjct: 243 DVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 109 ACLGVGDLRVGQCVHGEIIR--SGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
AC VG G+ VHG+IIR F ++ + +V Y+ CG + ++FD M+ +
Sbjct: 303 ACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK 362
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ + +DK + +F EM ++ +SW +M+S G +AL+LF++MR
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMR 422
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T + C LGA+ G+ +H + G + S GNAL+ Y +CG +
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLG-FEGSNSAGNALITMYARCGAV 481
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F +P + VSWNAMIS L +G G +EL+++M+A+G+ P++ +F+ VLT C
Sbjct: 482 KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H+GLV++ F SM I+P +HY ++D+LGR+G + EA DLI++M P +I
Sbjct: 542 NHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W ++LS CRT G +EL HA +L + P + G Y+LLSN Y+ G W DA +R MR+
Sbjct: 602 WEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRD 661
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 662 RGVKKEPGCSWIE 674
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 197/438 (44%), Gaps = 52/438 (11%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNP--SVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGI 96
V+ + + A F+ + +L N++I AY+ + V +F +LL + +
Sbjct: 94 LVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSL 153
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQC--VHGEIIRSGFERFGSIRIGVVELYTSCGQMD-- 152
PD+Y+F LL A + ++ V C +H +++SG S+ +V LY C +
Sbjct: 154 RPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEAT 213
Query: 153 -DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
D KV DEM ++D + M+ G+ ++GDV +F E+ + V WN MIS SG
Sbjct: 214 RDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSG 273
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA---ESSGLYRKVV 268
EA LF M + LDE T +VL CA +G G+ +H + + + +
Sbjct: 274 MAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAAL 333
Query: 269 SVGNALVDFYCKCG-------------------------------ILDTARNVFKEIPRK 297
V NALV FY KCG LD A VF+E+P K
Sbjct: 334 PVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK 393
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
N +SW M+SG G E ++L+ +M ++ V P T+ G + C G ++ ++L
Sbjct: 394 NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLH 453
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN--AAIWGSLLSSCRTH 415
+ L N ++ + R G V+EA+ + M PN + W +++S+ H
Sbjct: 454 GHIVQLGFEGSN-SAGNALITMYARCGAVKEAHLMFLVM---PNIDSVSWNAMISALGQH 509
Query: 416 GH----VELAEHAVKELI 429
GH +EL + V E I
Sbjct: 510 GHGREALELFDRMVAEGI 527
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 156/376 (41%), Gaps = 64/376 (17%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG------------TLNEI------- 50
HG++ + ++ +F+ N L F S CG TL ++
Sbjct: 312 HGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTIL 371
Query: 51 ---------KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEY 101
A ++F +M + L + M+ Y G +E+ +KLF +++ + P +Y
Sbjct: 372 SGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDY 431
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
T+A + AC +G L+ G+ +HG I++ GFE S ++ +Y CG + + +F M
Sbjct: 432 TYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVM 491
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+ D + N M IS+LG+ G EAL LF
Sbjct: 492 PNIDSVSWNAM-------------------------------ISALGQHGHGREALELFD 520
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M + D + + VL C G VD G ++ S G+ L+D +
Sbjct: 521 RMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY-TRLIDLLGR 579
Query: 281 CGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G + AR++ K +P + S W A++SG +G ELG +Q+ K + T++
Sbjct: 580 AGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF-KMTPQHDGTYIL 638
Query: 340 VLTCCAHAGL-VEKAR 354
+ + AG V+ AR
Sbjct: 639 LSNTYSAAGCWVDAAR 654
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 162/458 (35%), Positives = 239/458 (52%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L+ H + +L +S+ + A ++F++M +PS + + ++I AY G
Sbjct: 571 QLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITAYMDAG 630
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V + G+ PD +T +L AC + DL G+ V + G + +
Sbjct: 631 DLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVAT 690
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
V+LY CG+M +VFD +MR + V+
Sbjct: 691 AAVDLYVKCGEMAKAREVFD-------------------------------KMRHKDAVA 719
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W M+ +G EAL LF M+ + + D V L C RLGA+D+G+ +
Sbjct: 720 WGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVD 779
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
V +G AL+D Y KCG A VF+++ +K+++ WNAMI GL G ++
Sbjct: 780 WDEFLDNPV-LGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAF 838
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L QM GV N TF+G+L C H GL++ R F +MT L+ I P +EHYGCMVD+
Sbjct: 839 ALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDL 898
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G ++EA+ L+ M + NA I G+LL C+ H + ELAEH +K+LI LEPWNSGNY
Sbjct: 899 LSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNY 958
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIY+ GRW+DA LR+ M+ V+K P S +E
Sbjct: 959 VMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVE 996
>gi|224133640|ref|XP_002327644.1| predicted protein [Populus trichocarpa]
gi|222836729|gb|EEE75122.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 263/487 (54%), Gaps = 21/487 (4%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQ--SNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
LL+ HL QI A + L S +L HF +I Y IF + +P
Sbjct: 55 FELLYSTLNPFHLYQIQAQLITCGLFSLWSPRLLKHFAD----FGDIDYTIFIFKFIASP 110
Query: 64 SVLLFNSMIKAYSLNG-PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
+ N+++KAYSL+ P++ V F +LK+ G P+ YTF L C VG ++G+
Sbjct: 111 GTFVVNNVVKAYSLSSEPNKALVFYFEMLKS-GFCPNSYTFVSLFGCCAKVGCAKLGKKY 169
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG+ +++G +R + ++ Y CG M KVFDEMSHRD++ N +I G+ G++
Sbjct: 170 HGQAVKNGVDRILPVENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGEL 229
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
LF M ER+VVSWN++IS K L LF +M + +++T+V+VL C
Sbjct: 230 GIAHGLFEVMPERNVVSWNILISGYLKGNNPGCVLMLFRKMMNDGMRGNDSTIVSVLSAC 289
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
R + G+ +H + V+ L+D Y +C ++ AR +F ++ R+N+ W
Sbjct: 290 GRSARLREGRSVHGFIVKKFSSMNVIH-ETTLIDMYNRCHKVEMARRIFDKVVRRNLGCW 348
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKG-------VSPNKATFVGVLTCCAHAGLVEKARE 355
NAMI G +G + G+EL++ M+ + V P++ TF+GVL CA AGL+ + +
Sbjct: 349 NAMILGHCLHGNPDDGLELFKDMVDRAGLGKRDSVHPDEVTFIGVLCACARAGLLTEGKN 408
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM-----SIRPNAAIWGSLLS 410
F+ M H + PN H+ CM ++ R+G ++EA D++R+ + + +W +LL+
Sbjct: 409 FFSQMIYNHGLKPNFAHFWCMANLYARAGLIQEAEDILRTTQEEEEDMPLESLVWANLLN 468
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
SCR G+V L E LI++EPWN +Y LL N+YA GGRWDD ++ ++ ++
Sbjct: 469 SCRFQGNVALGERIANSLIDMEPWNILHYRLLLNVYAVGGRWDDVAMVKDLVKTKMKGRT 528
Query: 471 PGQSLIE 477
PG +L++
Sbjct: 529 PGCNLVD 535
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 268/478 (56%), Gaps = 40/478 (8%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFL----RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+IL+L R HA L + L SN IL + S CG+++ +A ++F++
Sbjct: 69 EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSN-ILINMYSKCGSVD---FARQVFDE 124
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M + S++ +N+MI + + NG E + L ++ G E+T + +L AC L
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
Q +H I++ + + ++++Y CG M D + VF+
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFES------------------- 225
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
M +RSVV+W+ M + ++ +AL LF + + + D+ + +V+
Sbjct: 226 ------------MPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA L A+ G+ +++ SG + V ++L+D Y KCG ++ + VF+++ ++NV
Sbjct: 274 CACAGLAAMIEGKQVNALLSKSGFCSNIF-VASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V WNAMISGL+ + R + L+E+M G+SPN TFV VL+ C H GLV+K ++ F
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDL 392
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
MT H + PN+ HY CMVD L R+G + EAYDLI + +A++WGSLL+SCRTHG++E
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LAE A K+L ++EP NSGNY+LLSN+YA G+WD+ +R ++E++VKK G+S IE
Sbjct: 453 LAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIE 510
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 255/458 (55%), Gaps = 32/458 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + ++H L + + V G L ++ K+F+ M + ++ +NS+I + G
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
V++F +++ G+ PD T L A GD+ G+ VH ++R G++ +G
Sbjct: 252 VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWD------VG 305
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
D+I N ++ + K ++ +F M R VSW
Sbjct: 306 ------------------------DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW 341
Query: 201 NLMISSLGKSGRDSEALRLF-HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
N +I+ ++G SEA+ ++ H + + + + T V+VLP + LGA+ G +H+ +
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+GL V VG ++D Y KCG LD A +F++ PR++ WNA+ISG+ +G G +
Sbjct: 402 KTGLNLDVY-VGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ QM +G+SP+ TFV +L C+HAGLV++ R F M + I P +HY CMVD+
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + +A+D IR+M I+P++AIWG+LL +CR HG+VE+ + A + L L+P N G Y
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYY 580
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SN+YA+ G+WD + +R +R N++K+PG S IE
Sbjct: 581 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIE 618
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 46/419 (10%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLNEIKYATKIFNQMRNP 63
+LR G T Q+HA LR L + + + V ++ A + F++MR+
Sbjct: 77 LLRAAQGPGTAA---QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHR 133
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V +N+M+ N + E V LF + G+ D T + +L C+ +GD + +H
Sbjct: 134 DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMH 193
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
++ G + + ++++Y G +++ KVFD MS
Sbjct: 194 LYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMS--------------------- 232
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
R +V+WN +IS + G+ + A+ +F MRD D T++++ A
Sbjct: 233 ----------SRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIA 282
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+ G + G+ +H Y G + GNA+VD Y K ++ A+ +F +P ++ VSWN
Sbjct: 283 QCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWN 342
Query: 304 AMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFA--SM 360
+I+G NG + +Y+ M +G+ P + TFV VL +H G +++ + A
Sbjct: 343 TLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIK 402
Query: 361 TGLHSIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
TGL NL+ Y C++D+ + G + EA L+ + R + W +++S HGH
Sbjct: 403 TGL-----NLDVYVGTCVIDLYAKCGKLDEAM-LLFEQTPRRSTGPWNAVISGVGVHGH 455
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 37/331 (11%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKV 157
D +TF PLL+A G G +H +R G R + G +V Y G++ D +
Sbjct: 70 DAFTFPPLLRAAQGPG---TAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FDEM HRDV N M+ G C ++ R +EA+
Sbjct: 127 FDEMRHRDVPAWNAMLSGLC-------------------------------RNARAAEAV 155
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
LF M + D TV +VLP+C LG + +H YA GL ++ V NA++D
Sbjct: 156 GLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF-VCNAMIDV 214
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y K G+L+ R VF + +++V+WN++ISG G+ VE++ M GVSP+ T
Sbjct: 215 YGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTL 274
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ + + A G + R + M V ++ +VD+ + + A + SM
Sbjct: 275 LSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMP 334
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+R +A W +L++ +G A H +
Sbjct: 335 VR-DAVSWNTLITGYMQNGLASEAIHVYDHM 364
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 273/518 (52%), Gaps = 56/518 (10%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
RK+ R +HG H+ ++ + LH N ++ + G + + A K+F +M
Sbjct: 989 RKLCRSVHG-----HVVEMGFQW---NLHVGNELMGMY----GKIGRMDDARKVFERMAV 1036
Query: 63 PSVLLFNSMIKAYSLN----GPSE-------------------------------EPVKL 87
S + +N+M+ Y+LN G SE E ++L
Sbjct: 1037 RSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMEL 1096
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F ++ GI A +L + + G+ +HG +++ GFE + ++ ++ LY
Sbjct: 1097 FGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK 1156
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER--------SVVS 199
G ++ +F E+ ++++ N +I + G D+ +F ++ + +VVS
Sbjct: 1157 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 1216
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ +I G+ EAL LF M+ + + T+ +VL +CA L A+ +G+ IH +
Sbjct: 1217 WSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVV 1276
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S L + VGN L++ Y K G VF++I K+++SWN M++G +G GE +
Sbjct: 1277 RS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 1335
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++QMI G P+ TFV VL+ C+HAGLV + RELF M + P +EHY CMVD+
Sbjct: 1336 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 1395
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++EA +++SM + PNA +WG+LL+SCR H + E+AE ++ NL +G+Y
Sbjct: 1396 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 1455
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LLSNIYA GRW+D+ +R+ + +KK+PGQS I+
Sbjct: 1456 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 1493
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 59/463 (12%)
Query: 14 TRTHLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-----SVLL 67
+++HL+Q IH+ + H+S + A VSV + A ++F +P ++LL
Sbjct: 883 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEV--SPIECFSNLLL 940
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+++A +G EE ++++ ++ LG+ D +TF +++AC +G ++ + VHG ++
Sbjct: 941 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVV 1000
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
GF+ + ++ +Y G+MDD KVF+ M+ R + N M+ G+ D
Sbjct: 1001 EMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASE 1060
Query: 188 LFREM----RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+FR M E ++V+W ++SS + G+ E + LF MR + + VL +
Sbjct: 1061 MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSV 1120
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L A D G+ IH Y G + + V N+L+ Y K G ++ AR +F EI KN+VSWN
Sbjct: 1121 DLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 1179
Query: 304 AMIS---------------------------------------GLAFNGRGELGVELYEQ 324
A+IS G A G+GE +EL+ +
Sbjct: 1180 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 1239
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP-NLEHYGCMVDVLGRS 383
M V N T VL+ CA + RE+ + + S++ N+ ++++ +S
Sbjct: 1240 MQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV--VRSLMDGNILVGNGLINMYTKS 1297
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
G +E +L+ + W ++++ HG L E+A++
Sbjct: 1298 GSFKEG-NLVFEKIENKDLISWNTMVAGYGIHG---LGENAIR 1336
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 237/425 (55%), Gaps = 5/425 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV--G 114
NQ + + + + S I S NG E K F+ ++ G+ P+ TF LL C V G
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSG 81
Query: 115 DLRVGQCVHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G +HG + G +R + ++ +Y+ G+ VFD M ++ + N MI
Sbjct: 82 SEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMI 141
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G V+ + LF EM ER ++SW MI+ K G EAL F EM+ + D
Sbjct: 142 DGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYV 201
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ G W+H Y + ++ + V N+L+D YC+CG ++ AR VF +
Sbjct: 202 AIIAALAACTHLGALSFGLWVHRYVMNQD-FKNNIRVSNSLIDLYCRCGCVEFAREVFDK 260
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M +G P+ TF G LT C+H GLVE+
Sbjct: 261 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 320
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F +M H I P +EHYGC+VD+ R+G + +A ++++SM ++PN + GSLL++CR
Sbjct: 321 LRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACR 380
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
HG + LAE VK L +L + NYV+LSN+YA G W+ A +R M+ +KK PG
Sbjct: 381 NHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKKQPG 440
Query: 473 QSLIE 477
S +E
Sbjct: 441 FSSVE 445
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 34/317 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 149 QVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALA 208
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F+ + +++LY CG ++ +VFD+M R V+
Sbjct: 209 ACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVS 268
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E + F
Sbjct: 269 WNSVIVGFAANGNAHESLVYFRKMQE-------------------------------EGF 297
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ D T L C+ +G V+ G ++ + + ++ G LVD Y + G L+ A
Sbjct: 298 KPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYG-CLVDLYSRAGRLEDA 356
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
NV + +P K N V ++++ +G + E + ++ + + +V + A
Sbjct: 357 LNVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAA 416
Query: 347 AGLVEKARELFASMTGL 363
G+ E A ++ M GL
Sbjct: 417 DGIWEGASKMRRKMKGL 433
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 245/432 (56%), Gaps = 6/432 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +N+ A +IF N V+L+NSMI Y N + E ++LF ++ G+ D TF
Sbjct: 252 CGRMND---ARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTF 308
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A +L AC +G + G VH + + GF I +V++Y+ C + DD K+F ++
Sbjct: 309 ASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQA 368
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D I+ N MI + G +D +F M +S++SWN MI ++ EAL LF EM
Sbjct: 369 YDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEM 428
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCG 282
+D+ ++ V+ CA + ++++G+ I + A GL + +++S +LVDFYCKCG
Sbjct: 429 NKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIST--SLVDFYCKCG 486
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+++ R +F + + + V WN+M+ G A NG G + +++QM + GV P TFVGVL+
Sbjct: 487 LVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLS 546
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C H GLVE+ R+ F +M + I P +EHY CMVD+ R+G + +A +LI M ++ +
Sbjct: 547 ACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADT 606
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
++W S+L C HG+ L + K +I+L+P NSG YV LS IYA W + +R M
Sbjct: 607 SMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLM 666
Query: 463 RENNVKKSPGQS 474
+ + K PG S
Sbjct: 667 YDKKIPKVPGCS 678
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 186/409 (45%), Gaps = 51/409 (12%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP------DEYTF 103
++ A ++FN+M + + +NSMI Y+ NG +E V LF K+L + P D +
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVL 176
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A ++ AC +G L G+ +H I+ E + +V LY CG +D V + M
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D + +I G+ G ++ +F VV WN MIS + EAL LF+ M
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNM 296
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK--- 280
R + + D +T +VL C+ LG +D G +H++ G ++ + +ALVD Y K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDII-IDSALVDMYSKCRR 355
Query: 281 ----------------------------CGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
CG +D AR +F +P K+++SWN+MI G + N
Sbjct: 356 PDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQN 415
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLH--SIVP 368
++L+ +M G+ +K + GV++ CA +E ++FA T GL I+
Sbjct: 416 ACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS 475
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+VD + G V L M ++ + W S+L T+GH
Sbjct: 476 T-----SLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 67/326 (20%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKV 157
D ++ A L +C G + G+ +H ++SG SI ++++Y+ C M + ++
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+EM R+ N MI G+ K G K L LF M + SWN++IS K G A
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVAR 124
Query: 218 RLFHEM----------------------------RD------QAFELDEATVVAVLPICA 243
RLF+EM +D + F D + V+ C
Sbjct: 125 RLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACT 184
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN----- 298
LGA+D G+ IH+ + V +G++LV+ Y KCG +D+A +V + +
Sbjct: 185 NLGALDCGKQIHARIVVDEVEFDSV-LGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 299 --------------------------VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
VV WN+MISG N +EL+ M KGV
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 333 NKATFVGVLTCCAHAGLVEKARELFA 358
+ +TF VL+ C+ G++++ ++ A
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHA 329
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 35 LILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
++L ++V I A +IF+ M + S++ +NSMI +S N E + LF + L
Sbjct: 372 ILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKL 431
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
G+ D+++ A ++ AC + L +G+ + G E I +V+ Y CG ++ G
Sbjct: 432 GLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHG 491
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
K+FD M D + N M+ G+ +G
Sbjct: 492 RKLFDRMMKSDEVPWNSMLMGY-------------------------------ATNGHGI 520
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHS----YAESSGLYRKVVS 269
EAL +F +MR + + T V VL C G V+ G +W ++ Y + G+
Sbjct: 521 EALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHY--- 577
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMI 326
+ +VD Y + G+L+ A N+ +++P K S W++++ G +G LG ++ +++I
Sbjct: 578 --SCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRII 633
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 24/247 (9%)
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+LD ++ L C G++ G+ +H SG+ V+S+GN L+ Y +C + A+
Sbjct: 3 DLDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQ 62
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG--VLTCCAH 346
+F+E+P++N SWN MI G +G +EL++ M P+K F V++ A
Sbjct: 63 QLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM------PHKDAFSWNVVISGFAK 116
Query: 347 AGLVEKARELFASMTGLHSIVPN--LEHYGCMVDVLGRSGCVREAYDLIRSMSIRP---- 400
G +E AR LF M + I N + Y C +G +EA L + +S+ P
Sbjct: 117 EGNLEVARRLFNEMPWKNGIAWNSMIHGYAC-------NGRPKEAVGLFKDLSLNPLERF 169
Query: 401 --NAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGNYVLLSNIYAEGGRWDDAET 457
+ + +++ +C G ++ + ++ E ++S L N+Y + G D A
Sbjct: 170 CGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANH 229
Query: 458 LRMWMRE 464
+ M+E
Sbjct: 230 VLNLMKE 236
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 260/462 (56%), Gaps = 33/462 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
H +I +++ K Q ++IL + + ++ A +IF++M +V+ +++MI AY
Sbjct: 148 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 207
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+G + + LF ++ + G+ PD+ T A LL AC + +L++G+ +H + + G +
Sbjct: 208 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDH 267
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y C +++D +LF +M ER
Sbjct: 268 FVCAALVDMYGKCREIEDAR-------------------------------FLFDKMPER 296
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+V+W +MI + G +E+L LF +MR++ D+ +V V+ CA+LGA+ + I
Sbjct: 297 DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 356
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + V+ +G A++D + KCG +++AR +F + KNV+SW+AMI+ ++G+G
Sbjct: 357 DYIQRKKFQLDVI-LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 415
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+ M+ G+ PNK T V +L C+HAGLVE+ F+ M +S+ +++HY C
Sbjct: 416 RKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTC 475
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+VD+LGR+G + EA LI SM++ + +WG+ L +CRTH V LAE A L+ L+P N
Sbjct: 476 VVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQN 535
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+Y+LLSNIYA GRW+D R M + +KK PG + IE
Sbjct: 536 PGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 577
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 158/318 (49%), Gaps = 45/318 (14%)
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F L G PD YT +++AC + +L++G+ +H + + G + + +V++Y
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
C +++D +FD+M RD++ +MI G+ + G ++ L LF +MRE VV
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP-------- 129
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
D+ +V V+ CA+LGA+ + I Y + V
Sbjct: 130 -----------------------DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 166
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
+ +G A++D Y KCG +++AR +F + KNV+SW+AMI+ ++G+G ++L+ M++
Sbjct: 167 I-LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 225
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP----NLEHYGC--MVDVLG 381
G+ P+K T +L C+ ++ R +H IV +L+H+ C +VD+ G
Sbjct: 226 SGMLPDKITLASLLYACSDLKNLQMGRL-------IHHIVYKFGLDLDHFVCAALVDMYG 278
Query: 382 RSGCVREAYDLIRSMSIR 399
+ + +A L M R
Sbjct: 279 KCREIEDARFLFDKMPER 296
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 43/400 (10%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTL-------NEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+ H +++ L L HFV C L EI+ A +F++M+ ++ + MI Y+
Sbjct: 51 LIHHIVYKFGLDLDHFV--CAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAE 108
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G + E + LF ++ G+ PD+ ++ AC +G + + + I R F+ +
Sbjct: 109 CGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVIL 168
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++ ++FD M ++VI + MI +
Sbjct: 169 GTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY--------------------- 207
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
G G+ +AL LF M D+ T+ ++L C+ L + +G+ IH
Sbjct: 208 ----------GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI 257
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
GL V ALVD Y KC ++ AR +F ++P +++V+W MI G A G
Sbjct: 258 VYKFGLDLDHF-VCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANE 316
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ L+++M +GV P+K V V+ CA G + KAR + ++ M+
Sbjct: 317 SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI-DDYIQRKKFQLDVILGTAMI 375
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
D+ + GCV A ++ M N W +++++ HG
Sbjct: 376 DMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 414
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 3/215 (1%)
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
M+ K G F E+ D T+ V+ C L + +G+ IH G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
L V ALVD Y KC ++ AR +F ++ +++V+W MI G A G+ + L+
Sbjct: 61 LDLDHF-VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLF 119
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
E+M +GV P+K V V+ CA G + KAR + ++ M+D+ +
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKAR-IIDDYIQRKKFQLDVILGTAMIDMYAK 178
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
GCV A ++ M N W +++++ HG
Sbjct: 179 CGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 212
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 237/434 (54%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A K+F+++ V+ +N+MI Y+ G ++E ++LF + + PDE T ++ A
Sbjct: 170 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 229
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + +G+ VH I GF I +++LY CG+
Sbjct: 230 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE------------------- 270
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+ LF + + V+SWN +I EAL LF EM
Sbjct: 271 ------------VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA++IG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVY-----INKRLKGVANASSHRTSLIDMYAKCGD 373
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ VF I +++ SWNAMI G A +GR +++ +M + P+ TFVG+L+
Sbjct: 374 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 433
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SM + I P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 434 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 493
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP N G+YVLLSNIYA GRW++ +R +
Sbjct: 494 IWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLN 553
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 554 DKGMKKVPGCSSIE 567
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 222/410 (54%), Gaps = 6/410 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFNSMI 72
+ L IHA ++ LH +N L+ + C + + YA +F ++ P++L++N+M
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ ++L+ + L+ + +LG+ P+ YTF LLK+C R GQ +HG +++ G++
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ +Y G+++D KVFD+ SHRDV+ +I G+ KG + +F E+
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ VVSWN MIS ++G + EAL LF EM DE+T+V+V+ CA+ ++++G+
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+HS+ + G + + + NAL+D Y KCG ++TA +F+ + K+V+SWN +I G
Sbjct: 241 QVHSWIDDHG-FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM 299
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG-LHSIVPNLE 371
+ + L+++M+ G SPN T + +L CAH G +E R + + L +
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASS 359
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H ++D+ + G + A + S+ R ++ W +++ HG A
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS-WNAMIFGFAMHGRANAA 408
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 213/333 (63%), Gaps = 1/333 (0%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y S ++ + KVFD M RD++ N MIHG+ +G+V +F +R SW+ MI
Sbjct: 33 YVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMI 92
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S+ KS R EAL L+ EM + D T+V+V+ C+ LGA+ +G +H + ES+ +
Sbjct: 93 SAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIE 152
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ +G AL+D Y KCG +++A+ VF +P K+V +W++MI GLA +G G + L+ +
Sbjct: 153 LDL-KLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSK 211
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
MI++G+ PN TFVGVL C H GLV + ++ F SM +H I P +EHYGCMVD+LGRSG
Sbjct: 212 MISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSG 271
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
V EA LIRSM+ P+ IW +LL +CR H +VE+AE A+ +L L+P G+YVLLSN
Sbjct: 272 HVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSN 331
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA+ W+ +R +R +N+++ PG+S IE
Sbjct: 332 IYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIE 364
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 38/282 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A +IF+ + ++SMI AY+ + S+E ++L+ + I PD T ++
Sbjct: 69 EVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVS 128
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L VG VH + + E + ++++Y CG ++ +VFD M +DV
Sbjct: 129 ACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDV-- 186
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+W+ MI L G E+L LF +M +
Sbjct: 187 -----------------------------QTWSSMIIGLANHGLGHESLSLFSKMISEGM 217
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ + T V VL C +G V G ++ S E G+ V G +VD + G ++ A
Sbjct: 218 KPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYG-CMVDLLGRSGHVEEA 276
Query: 288 RNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
R + + + + + W A++ R VE+ E+ +AK
Sbjct: 277 RQLIRSMTFEPDTIIWRALLGAC----RIHKNVEIAEEAMAK 314
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 28 HKLHQSNLI---------LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
H+ +SN I L + CG +I+ A ++F++M V ++SMI + +
Sbjct: 143 HRFVESNRIELDLKLGTALIDMYAKCG---DIESAQRVFDRMPEKDVQTWSSMIIGLANH 199
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC-------VHGEIIRSGF 131
G E + LF+ + + G+ P+ TF +L AC VG + G+ VHG I
Sbjct: 200 GLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHG--IEPTV 257
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCK 178
E +G + V+L G +++ ++ M+ D I+ ++ G C+
Sbjct: 258 EHYGCM----VDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL-GACR 300
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 261/472 (55%), Gaps = 12/472 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSV-----CGTLNEIKYATKIFNQMRN 62
LL + HL QIHAH L L QS +A + V C + YA IF ++
Sbjct: 13 LLRKCKSVQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQ 72
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC-LGVGDL-RVGQ 120
++ ++NSMI+ Y L+ ++ + + L + G ++YTF PL+KAC L +L R+G
Sbjct: 73 RNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKACALVYRELKRIGY 132
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +I G+E + +VE Y S + +FD+ S +DV+V +M+ G+ K G
Sbjct: 133 LVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDVVVWTVMVDGYGKVG 191
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D++ LF EM ER+V+SW+ M+++ + E L LF +M+ + +++ +V+VL
Sbjct: 192 DIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLT 251
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+ G W+HSYA+ GL + + ALVD Y KCG +++A VF+ I K+
Sbjct: 252 ACAHLGAITQGLWMHSYAKRYGLDSNPI-LATALVDMYSKCGYIESALEVFEGISNKDAG 310
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+WNAMISG A G +EL+++MIA G +ATFV +L C HA +VE+ E F M
Sbjct: 311 AWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQM 370
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGH 417
++ + P EHY C+VD++ R+G V +A + +A +WG++LS+CR + +
Sbjct: 371 YPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRN 430
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+E+ + +L L + G VL NI++E GR A+ +R E KK
Sbjct: 431 IEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKK 482
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 254/459 (55%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++ LRH ++ ++ +E A +F++M + ++ +NSMI YS G
Sbjct: 160 EVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGG 219
Query: 80 PSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E+ +L+ +L + G+ P+ T +L+AC DL G VH II E S
Sbjct: 220 FYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAH 279
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++ LY CG +D ++F+EMS++D + ++ G+ G VDK + LFREM+ +
Sbjct: 280 NSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLS 339
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN +IS L ++ + L L EM++ F + T+ ++LP + + G+ IH+YA
Sbjct: 340 TWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYA 399
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+G Y + V +++D Y K G L A+ VF + ++++ W A+IS + +G
Sbjct: 400 IRNG-YAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAA 458
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ L+ M++ G P+ TF VL CAH+G+V +A ++F M + P +EHY CMV
Sbjct: 459 LRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVG 518
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
VL R+G + EA + I M I PNA +WG+LL+ G VEL + L N+EP N+GN
Sbjct: 519 VLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGN 578
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+++N+Y++ GRW++AE +R M++ +KK PG S IE
Sbjct: 579 YVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIE 617
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 169/374 (45%), Gaps = 49/374 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + L N + + ++ N + A K+F+++ + ++ +N+M+ YS++
Sbjct: 55 QLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHN 114
Query: 80 ---PSEEPVKLFALLKNLGIWPDEYTFAPLLKA-CLGVGDLRVGQCVHGEIIRSGFERFG 135
+ + +L + PD +T +LKA + D + + V ++R GF+
Sbjct: 115 MHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDI 174
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ Y+ C + +FD M RD++ N MI G+ + G + L+R+M
Sbjct: 175 FVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKM--- 231
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
DS LR + TVV+VL CA+ + G +H
Sbjct: 232 ----------------LDSTGLR-----------PNGVTVVSVLQACAQTNDLVFGMKVH 264
Query: 256 SYAESSGLYRKV---VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+ + RKV VS N+L+ Y KCG LD AR +F E+ K+ V++ +++SG +
Sbjct: 265 QFI----IERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTH 320
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF-----ASMTGLHSIV 367
G + ++L+ +M +S A G++ + G++E +E+ + L SI+
Sbjct: 321 GFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSIL 380
Query: 368 PNLEHYGCMVDVLG 381
P + C ++ G
Sbjct: 381 PT---FSCFSNLKG 391
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 253/429 (58%), Gaps = 4/429 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG- 95
L HF + +L++ A K+F++M V+ + +++ Y+ G ++E +LF + +G
Sbjct: 184 LVHFYANHKSLDD---AGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGG 240
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+ T + A +G L G +H + G R ++ +V+++ CG +
Sbjct: 241 MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAR 300
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VFD M +DV M++ + K GD++ LF++M R+VVSW+ MI++ + + E
Sbjct: 301 EVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEE 360
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ LF EM + +AT+V+VL CA+LG +D+G+WI+ S V++GNAL+
Sbjct: 361 AVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALI 420
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG + A +F E+ +NVVSWN MI A +G+ E + L+EQ+ + + P++
Sbjct: 421 DMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQI 480
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF+G+L C+H+GLV + R F M + I P +EHY CM+D+LG+ G + EA+++ R
Sbjct: 481 TFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARG 540
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + + A WG+LL++CR HG+VE+ +L+ L+P +SG YVL+S IYA +WD
Sbjct: 541 MPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQV 600
Query: 456 ETLRMWMRE 464
+ LRM MR+
Sbjct: 601 KMLRMTMRD 609
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 138/295 (46%), Gaps = 34/295 (11%)
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-R 224
V+V N ++H + +D +F EM ER VVSW ++ ++G EA RLF M
Sbjct: 178 VLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVV 237
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF------- 277
+ T+VA + ++G + G +H Y G+ R V++ NALVD
Sbjct: 238 VGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARS-VNLDNALVDMFGKCGCV 296
Query: 278 ------------------------YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
Y KCG L++A +FK++PR+NVVSW+ MI+ +
Sbjct: 297 RYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLN 356
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ E V L+ +MIA GV P AT V VL+ CA G ++ R ++ + + I +
Sbjct: 357 QPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLG 416
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++D+ + G V EA L M+ R N W +++ + HG E A ++L
Sbjct: 417 NALIDMFAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQL 470
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+ IH A G + V VGNALV FY LD A VF E+P ++VVSW ++ G A
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYA 220
Query: 311 FNGRGELGVELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHSIV 367
G + L+ +M + G+ PN T V ++ GL+ L +T G+ V
Sbjct: 221 RAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSV 280
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
NL++ +VD+ G+ GCVR A ++ M ++ + W S++++ G +E AE K+
Sbjct: 281 -NLDN--ALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAEQLFKD 336
Query: 428 L 428
+
Sbjct: 337 M 337
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/458 (32%), Positives = 251/458 (54%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH + LRH + + + + + ++ A KIF Q N +++ ++I Y LNG
Sbjct: 195 EIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNG 254
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ + +++F L + P+ T A +L AC G+ L +G+ +H I++ G + +
Sbjct: 255 LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGS 314
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG++D ++F R M E+ V
Sbjct: 315 AIMDMYAKCGRLDLAYQIF-------------------------------RRMPEKDAVC 343
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +I++ ++G+ EA+ LF +M + D ++ A L CA L A+ G+ IHS+
Sbjct: 344 WNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM- 402
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + V +AL+D Y KCG L AR VF + KN VSWN++I+ +G E+ +
Sbjct: 403 IKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSL 462
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ +M+ G+ P+ TF+ +L+ C HAG V+K + F MT + I +EHY C+VD+
Sbjct: 463 ALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDL 522
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + EA++ I++M P+ +WG+LL +CR HG+VELAE A + L++L+P NSG Y
Sbjct: 523 FGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCY 582
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSN++A+ G+W +R M++ V+K PG S IE
Sbjct: 583 VLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIE 620
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 168/373 (45%), Gaps = 36/373 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A ++F++M N +L+N M+ + G VK+F ++N P+ TFA +L
Sbjct: 23 IEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSI 82
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G +HG +I GF + +V +Y+ GQ+ D +K+F+ M +V+
Sbjct: 83 CASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTW 142
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N MI GF + G +D EA LF EM
Sbjct: 143 NGMIAGFVQNGFMD-------------------------------EASLLFSEMISAGVS 171
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
D T + LP ++ G+ IH Y G+ V + +AL+D Y KC + A
Sbjct: 172 PDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVF-LKSALIDIYFKCRDVGMACK 230
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+FK+ ++V A+ISG NG +E++ ++ + +SPN T VL CA
Sbjct: 231 IFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLAT 290
Query: 350 VEKARELFASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
+ +EL A++ L + H G ++D+ + G + AY + R M + +A W ++
Sbjct: 291 LNLGKELHANI--LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAI 347
Query: 409 LSSCRTHGHVELA 421
+++C +G + A
Sbjct: 348 ITNCSQNGKPQEA 360
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D V + +I + + G ++ LF +M + V WN+M++ K G + A+++F +MR
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T +VL ICA + G +H S G + + V NALV Y K G L
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPL-VANALVAMYSKFGQL 124
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F +P NVV+WN MI+G NG + L+ +MI+ GVSP+ TF L
Sbjct: 125 SDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSV 184
Query: 345 AHAGLVEKAREL 356
+ +++ +E+
Sbjct: 185 TESASLKQGKEI 196
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
VG++L+ Y + G ++ AR +F ++P K+ V WN M++G G V+++E M
Sbjct: 9 VGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ 68
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLH--SIVPNLEHYGCMVDVLGRSGC 385
PN TF VL+ CA L E +L + G H +V N +V + + G
Sbjct: 69 TKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN-----ALVAMYSKFGQ 123
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ +A L +M N W +++ +G ++ A E+I+
Sbjct: 124 LSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMDEASLLFSEMIS 167
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 9/150 (6%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H IH+ ++ + + + G + A +F+ MR + + +NS+I AY
Sbjct: 394 HGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYG 453
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG----QCVHGEI-IRSGF 131
+G E + LF + GI PD TF +L AC G + G +C+ E I +
Sbjct: 454 SHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARM 513
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E + I V+L+ G++++ + M
Sbjct: 514 EHYACI----VDLFGRAGRLNEAFETIKNM 539
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 234/425 (55%), Gaps = 31/425 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A FN+M + ++ +NS+I Y+ G + +F L+ I PD T ++ AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G C+HG I++ GFE ++ ++++Y CG + +F+
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN------------- 590
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
K D K V+WN++I++ ++G EA+ FH+MR + F +
Sbjct: 591 ------KTDFTK-----------DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T V+VLP A L A G H+ G + VGN+L+D Y KCG LD + +F
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL-VGNSLIDMYAKCGQLDYSEKLFN 692
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
E+ K+ VSWNAM+SG A +G G+ + L+ M V + +FV VL+ C HAGLVE+
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEE 752
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R++F SM+ + I P+LEHY CMVD+LGR+G E I+ M + P+A +WG+LL SC
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R H +V+L E A+ L+ LEP N ++V+LS+IYA+ GRW DA R M + +KK+PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 473 QSLIE 477
S +E
Sbjct: 873 CSWVE 877
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 198/448 (44%), Gaps = 86/448 (19%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRH--KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
RLL L QIHA + K H S + H +++ ++ A +F+ NPS
Sbjct: 37 RLLSSCKHLNPLLQIHAQIIVSGFKHHHS---ITHLINLYSLFHKCDLARSVFDSTPNPS 93
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+L+NSMI+AY+ + E ++++ + G+ PD+YTF +LKAC G +L+ G HG
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
EI R G ER I G+V++Y+ G + +VFD+M RDV+ N MI G
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG--------- 204
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
L +S EA+ F M+ E +++ + P +
Sbjct: 205 ----------------------LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICK 242
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVS--VGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
L +++ + IH Y ++R+ S V N L+D Y KCG +D AR VF ++ ++ VSW
Sbjct: 243 LSNIELCRSIHGY-----VFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA--------------- 347
M++G A NG +EL+++M V NK + V A
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 348 --------------------GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
G EKA++LF + G +L + ++ L ++G
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG-----RDLVAWSAIIAALVQTGYPE 412
Query: 388 EAYDLIRSMS---IRPNAAIWGSLLSSC 412
EA L + M ++PN S+L +C
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPAC 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 179/403 (44%), Gaps = 35/403 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH L+ ++ L+ + + E + A ++F ++ ++ ++++I A G
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE + LF ++N + P+ T +L AC + L++G+ +H +++ + S
Sbjct: 410 YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V +Y CG + F+ MS RD++ N +I+G+ + GD
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD-----------------P 512
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N A+ +F+++R A D T+V V+P CA L +D G IH
Sbjct: 513 YN--------------AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
G + V NAL+D Y KCG L +A +F + K+ V+WN +I+ NG +
Sbjct: 559 KLG-FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ + QM + PN TFV VL A+ + A + + + N ++D
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLID 676
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + G + + L M + + W ++LS HGH + A
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRA 718
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 181/412 (43%), Gaps = 51/412 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG ++ A ++F+QM + + + +M+ Y+ NG E ++LF +K +
Sbjct: 269 LIDLYSKCG---DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
++ + A DL G+ +HG ++ + + ++ +Y CG+ + +
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F + RD++ + +I + G ++ L LF+
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ-------------------------- 419
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
EM++Q + + T++++LP CA L + +G+ IH + + + +S G ALV
Sbjct: 420 -----EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD-LSTGTALVS 473
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG A F + +++V+WN++I+G A G ++++ ++ ++P+ T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH------YGCMVDVLGRSGCVREAY 390
VGV+ CA +++ T +H ++ L ++D+ + G + A
Sbjct: 534 MVGVVPACALLNDLDQG-------TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE--LINLEPWNSGNYV 440
L + W ++++ +GH + A + + L N P NS +V
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP-NSVTFV 637
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 44 CGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
CG+L ++ +FN+ + +N +I AY NG ++E + F ++ P+ T
Sbjct: 579 CGSLPSAEF---LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
F +L A + R G H II+ GF + ++++Y CGQ+D K+F+EM
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 695
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALR 218
H+D + N M+ G+ G D+ + LF M+E V VS+ ++S+ +G E +
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 755
Query: 219 LFHEMRDQ 226
+FH M D+
Sbjct: 756 IFHSMSDK 763
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 240/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N++I Y+ G ++E + LF + + PDE T ++ A
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G +++G+ VH I G I +++LY+ CG+
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGE------------------- 285
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+ LF+ + + V+SWN MI EAL LF EM
Sbjct: 286 ------------VETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGEN 333
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA+LGA+D G+WIH Y + +++ V NA L+D Y KCG
Sbjct: 334 PNDVTMLSILPACAQLGAIDFGRWIHVYID-----KRIKGVTNASSLRTSLIDMYAKCGD 388
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF + + + + NAMI G A +GR +++ +M G+ P+ TFVG+L+
Sbjct: 389 IEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SMT + I P LEHYGCM+D+LG G +EA ++I +M++ P+
Sbjct: 449 CSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGV 508
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E ++LI +EP N G+YVLLSNIYA GRW++ +R +
Sbjct: 509 IWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLN 568
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 569 DKGMKKVPGCSSIE 582
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/409 (31%), Positives = 220/409 (53%), Gaps = 9/409 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + C + + YA +F ++
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ +KL+ + +LG+ P+ YTF LLK+C + + GQ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G+E + ++ +Y G+ D KVFD SHRDV+ +I G+ +G +
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ +F E+ + VVSWN +IS +G + EAL LF EM + DE+T+V V+ C
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ G++ +G+ +HS+ + GL + + NAL+D Y KCG ++TA +F+ + K+V+SW
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSN-LKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MI G + + L+++M+ G +PN T + +L CA G ++ R + +
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364
Query: 363 LHSIVPNLEHY-GCMVDVLGRSGCVREAYDLIRSMSIRP----NAAIWG 406
V N ++D+ + G + A+ + SM R NA I+G
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFG 413
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 261/474 (55%), Gaps = 38/474 (8%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQS----NLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
L+ N+ L QI A+ + K HQ N L +F + T + + YA +F+ M P
Sbjct: 37 LISKCNSERELMQIQAYAI--KSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEP 94
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+++FNS+ + YS + E LF + + PD YTF LLKAC L G+ +H
Sbjct: 95 DIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLH 154
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
++ G + + ++ +YT C +D VFD +
Sbjct: 155 CLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIV--------------------- 193
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
E VV +N MI+ + R +EAL LF EM+ + + +E T+++VL CA
Sbjct: 194 ----------EPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCA 243
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
LG++D+G+WIH YA+ G + K V V AL+D + KCG LD A ++F+ + K+ +W+
Sbjct: 244 LLGSLDLGKWIHEYAKKHG-FCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWS 302
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI A +G+ E + ++E+M ++ V P++ TF+G+L C+H GLVE+ RE F+ M
Sbjct: 303 AMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHE 362
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
IVP+++HYG MVD+LGR+G + +AY+ I + I P +W LL++C +H ++ELAE
Sbjct: 363 FGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEK 422
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ ++ L+ + G+YV+LSN+YA +W+ ++LR M++ K PG S IE
Sbjct: 423 VSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIE 476
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/490 (32%), Positives = 265/490 (54%), Gaps = 14/490 (2%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQ-----SNLILAHFVSVCGTLNEIK---- 51
+ I L+ T L Q+HA L S IL + T+ K
Sbjct: 26 LSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFS 85
Query: 52 ---YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
YA F+ ++NPS +N +I+ ++L+ + + F ++ + PD +++ LK
Sbjct: 86 LLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALK 145
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC + L + QC+H ++ + GF + ++ +Y+ ++ +VFDE S RDV+
Sbjct: 146 ACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVS 205
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N ++ GF K G+ K +F M R VSW +I+ + +EA+ LF M
Sbjct: 206 YNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKL 265
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E D +V+ L CA+LG ++ G+ IH Y + + + + LVDFY K G +DTA
Sbjct: 266 EPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQADSF-LSTGLVDFYAKSGCIDTAI 324
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF+ P K++++WNAM+ G+A +G L + + +M+ G+ P+ +F+GVL C+H G
Sbjct: 325 KVFELSPDKSLITWNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGG 384
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++A++LF M ++ + L+HYGCM D+L R+G ++EA +L + + + + +W L
Sbjct: 385 LVDEAKKLFDEMESIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGL 444
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN-V 467
L CR HG++E+AE A K+++ L+P + G Y +L+N+YA RW+D +R M N V
Sbjct: 445 LGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAV 504
Query: 468 KKSPGQSLIE 477
KK+ G+S I+
Sbjct: 505 KKNAGRSSIQ 514
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 171/494 (34%), Positives = 266/494 (53%), Gaps = 51/494 (10%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+ IL+ L + L Q+HA L L L+H ++ YA IFN +
Sbjct: 4 LNHPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFAST-YAFTIFNHI 62
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFAL----LKNLGIWPDEYTFAPLLKACLGVGDL 116
NP++ L+N++I SL S++ F+L L + + P+ +TF L KAC L
Sbjct: 63 PNPTLFLYNTLIS--SLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWL 120
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+ G +H +++ F + + D V+N +++ +
Sbjct: 121 QHGPPLHAHVLK-----------------------------FLQPPY-DPFVQNSLLNFY 150
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG---------RDS----EALRLFHEM 223
K G + YLF ++ E + +WN M+++ +S D+ EAL LF +M
Sbjct: 151 AKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASHVSYSTSFEDADMSLEALHLFCDM 210
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + +E T+VA++ C+ LGA+ G W H Y + L VG ALVD Y KCG
Sbjct: 211 QLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRF-VGTALVDMYSKCGC 269
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L+ A +F E+ ++ +NAMI G A +G G +ELY M + + P+ AT V +
Sbjct: 270 LNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFA 329
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H GLVE+ E+F SM G+H + P LEHYGC++D+LGR+G ++EA + ++ M ++PNA
Sbjct: 330 CSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAI 389
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W SLL + + HG++E+ E A+K LI LEP SGNYVLLSN+YA GRW+D + +RM M+
Sbjct: 390 LWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMK 449
Query: 464 ENNVKKSPGQSLIE 477
++ V K PG SL+E
Sbjct: 450 DHGVDKLPGFSLVE 463
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 245/438 (55%), Gaps = 2/438 (0%)
Query: 41 VSVCGTLNEIKY-ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ VC + + I+ ++F++M VL ++I ++ EE + LF+ + L I P+
Sbjct: 39 IKVCRSKSNIRMDVDELFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPN 98
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E+TFA ++ + G+ ++ +G+ +H ++ G + +++ Y ++ F+
Sbjct: 99 EFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFE 158
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
++ +V+ +IHG+ KKG +D L LF+EM ER+VVSWN M+ + G + EA+ L
Sbjct: 159 DIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSL 218
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F EM + F +++T + A + ++ +G+ H+ A S L V V N+LV FY
Sbjct: 219 FIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKS-LCTSDVFVCNSLVSFYA 277
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG ++ + VF E+P +N VSWNA+I G A NGRGE V +E+M A G+ PN T +G
Sbjct: 278 KCGSMEDSLLVFNELPDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLG 337
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C HAGLVEK F M + EHY CMVD+L R G ++EA + +
Sbjct: 338 LLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAAKFLHDLPFD 397
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
P W +LL C H + EL++ A ++++ L+P + +YV+LSN Y+ GRW T+R
Sbjct: 398 PGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAYSAAGRWQQVSTIR 457
Query: 460 MWMRENNVKKSPGQSLIE 477
M+E +K+ PG S IE
Sbjct: 458 REMKEKGLKRIPGCSWIE 475
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 130/342 (38%), Gaps = 67/342 (19%)
Query: 20 QIHAHFLRHKLHQ----SNLILAHFVSVCG------------TLNEIKYAT--------- 54
Q+HA ++ L+ + +L + +C N + Y T
Sbjct: 120 QLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDIQKPNVVSYTTLIHGYLKKG 179
Query: 55 ------KIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++F +M +V+ +N+M+ +S G +EE V LF + G P++ TF +
Sbjct: 180 KIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFPCAIT 239
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+ + L +G+ H ++S + +V Y CG M+D + VF+E+ R+ +
Sbjct: 240 SAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNELPDRNTVS 299
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF ++GR +A+ F MR
Sbjct: 300 WNAVICGF-------------------------------AQNGRGEDAVIFFERMRAAGL 328
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSY--AESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ T++ +L C G V+ G + E G+ + +VD + G L
Sbjct: 329 RPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYA--CMVDLLSRFGRLKE 386
Query: 287 ARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
A ++P W A++ G + EL ++++A
Sbjct: 387 AAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILA 428
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 270/467 (57%), Gaps = 3/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSM 71
T L Q HAH ++ + + ++ C + L + YA +F QM+NP++ +N++
Sbjct: 35 TTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTV 94
Query: 72 IKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
I+ +S + + + LF +L + + P T+ + KA +G G +HG II+ G
Sbjct: 95 IRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLG 154
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ IR ++ +Y + G + + ++F++ DV+ N MI G K G++D+ LF
Sbjct: 155 LQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFD 214
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M ++ +SWN MI ++G EAL+LF +M+++ + E T+V++L A++GA+
Sbjct: 215 KMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQ 274
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G WIH Y + + L + V A++D YCKCG + A VF++IP +++ SWN+MI GLA
Sbjct: 275 GVWIHEYIKKNNLQLNAIVV-TAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLA 333
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG + + +++ + + + P+ +F+ VLT C H +V++ E F+ M + I P++
Sbjct: 334 VNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSI 393
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+HY MVD++ R+G + EA I++M I +A IWG LLS+CR +G+ E+A+ A +++
Sbjct: 394 KHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNE 453
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P + YVL++NI+A G + A R+ MR V+K PG S IE
Sbjct: 454 LDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIE 500
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 273/518 (52%), Gaps = 56/518 (10%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
RK+ R +HG H+ ++ + LH N ++ + G + + A K+F +M
Sbjct: 151 RKLCRSVHG-----HVVEMG---FQWNLHVGNELMGMY----GKIGRMDDARKVFERMAV 198
Query: 63 PSVLLFNSMIKAYSLN----GPSE-------------------------------EPVKL 87
S + +N+M+ Y+LN G SE E ++L
Sbjct: 199 RSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMEL 258
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F ++ GI A +L + + G+ +HG +++ GFE + ++ ++ LY
Sbjct: 259 FGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK 318
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER--------SVVS 199
G ++ +F E+ ++++ N +I + G D+ +F ++ + +VVS
Sbjct: 319 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 378
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ +I G+ EAL LF M+ + + T+ +VL +CA L A+ +G+ IH +
Sbjct: 379 WSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVV 438
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S L + VGN L++ Y K G VF++I K+++SWN M++G +G GE +
Sbjct: 439 RS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++QMI G P+ TFV VL+ C+HAGLV + RELF M + P +EHY CMVD+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++EA +++SM + PNA +WG+LL+SCR H + E+AE ++ NL +G+Y
Sbjct: 558 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 617
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LLSNIYA GRW+D+ +R+ + +KK+PGQS I+
Sbjct: 618 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 59/463 (12%)
Query: 14 TRTHLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-----SVLL 67
+++HL+Q IH+ + H+S + A VSV + A ++F +P ++LL
Sbjct: 45 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEV--SPIECFSNLLL 102
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+++A +G EE ++++ ++ LG+ D +TF +++AC +G ++ + VHG ++
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVV 162
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
GF+ + ++ +Y G+MDD KVF+ M+ R + N M+ G+ D
Sbjct: 163 EMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASE 222
Query: 188 LFREM----RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+FR M E ++V+W ++SS + G+ E + LF MR + + VL +
Sbjct: 223 MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSV 282
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L A D G+ IH Y G + + V N+L+ Y K G ++ AR +F EI KN+VSWN
Sbjct: 283 DLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 341
Query: 304 AMIS---------------------------------------GLAFNGRGELGVELYEQ 324
A+IS G A G+GE +EL+ +
Sbjct: 342 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 401
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP-NLEHYGCMVDVLGRS 383
M V N T VL+ CA + RE+ + + S++ N+ ++++ +S
Sbjct: 402 MQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV--VRSLMDGNILVGNGLINMYTKS 459
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
G +E +L+ + W ++++ HG L E+A++
Sbjct: 460 GSFKEG-NLVFEKIENKDLISWNTMVAGYGIHG---LGENAIR 498
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 259/470 (55%), Gaps = 10/470 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL Q+ + + L S+ + + C L + YA IF++ P+ L+ +++ Y
Sbjct: 39 HLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTGY 98
Query: 76 SLNGP--SEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
S + P + F L+ N P+ + + +LK+ + VH + +SGF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 133 RFGSIRIGVVELY-TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ ++ ++ Y +S + ++FDEMS R+V+ M+ G+ + GD+ + LF E
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFEE 218
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDI 250
M ER V SWN ++++ ++G EA+ LF M D +E T+V VL CA+ G + +
Sbjct: 219 MPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQL 278
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
+ IH++A L V V N+LVD Y KCG L+ A +VFK +K++ +WN+MI+ A
Sbjct: 279 AKGIHAFAYRRNLSSDVF-VSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMINCFA 337
Query: 311 FNGRGELGVELYEQMI---AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
+GR E + ++E M+ + + P+ TF+G+L C H GLV K R F M I
Sbjct: 338 LHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIE 397
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGC++D+LGR+G EA + + +M + + AIWGSLL++C+ +GH++LAE AVK
Sbjct: 398 PRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVAVKN 457
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ L P N G +++N+Y E G W++A R ++ N K PG S IE
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIE 507
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/518 (31%), Positives = 273/518 (52%), Gaps = 56/518 (10%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
RK+ R +HG H+ ++ + LH N ++ + G + + A K+F +M
Sbjct: 151 RKLCRSVHG-----HVVEMGFQW---NLHVGNELMGMY----GKIGRMDDARKVFERMAV 198
Query: 63 PSVLLFNSMIKAYSLN----GPSE-------------------------------EPVKL 87
S + +N+M+ Y+LN G SE E ++L
Sbjct: 199 RSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMEL 258
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F ++ GI A +L + + G+ +HG +++ GFE + ++ ++ LY
Sbjct: 259 FGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGK 318
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER--------SVVS 199
G ++ +F E+ ++++ N +I + G D+ +F ++ + +VVS
Sbjct: 319 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 378
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ +I G+ EAL LF M+ + + T+ +VL +CA L A+ +G+ IH +
Sbjct: 379 WSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVV 438
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S L + VGN L++ Y K G VF++I K+++SWN M++G +G GE +
Sbjct: 439 RS-LMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++QMI G P+ TFV VL+ C+HAGLV + RELF M + P +EHY CMVD+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++EA +++SM + PNA +WG+LL+SCR H + E+AE ++ NL +G+Y
Sbjct: 558 LGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY 617
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LLSNIYA GRW+D+ +R+ + +KK+PGQS I+
Sbjct: 618 MLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 219/463 (47%), Gaps = 59/463 (12%)
Query: 14 TRTHLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-----SVLL 67
+++HL+Q IH+ + H+S + A VSV + A ++F +P ++LL
Sbjct: 45 SKSHLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEV--SPIECFSNLLL 102
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+++A +G EE ++++ ++ LG+ D +TF +++AC +G ++ + VHG ++
Sbjct: 103 WNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVV 162
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
GF+ + ++ +Y G+MDD KVF+ M+ R + N M+ G+ D
Sbjct: 163 EMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASE 222
Query: 188 LFREM----RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+FR M E ++V+W ++SS + G+ E + LF MR + + VL +
Sbjct: 223 MFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSV 282
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L A D G+ IH Y G + + V N+L+ Y K G ++ AR +F EI KN+VSWN
Sbjct: 283 DLAAFDEGKVIHGYVVKGG-FENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWN 341
Query: 304 AMIS---------------------------------------GLAFNGRGELGVELYEQ 324
A+IS G A G+GE +EL+ +
Sbjct: 342 ALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 401
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP-NLEHYGCMVDVLGRS 383
M V N T VL+ CA + RE+ + + S++ N+ ++++ +S
Sbjct: 402 MQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV--VRSLMDGNILVGNGLINMYTKS 459
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
G +E +L+ + W ++++ HG L E+A++
Sbjct: 460 GSFKEG-NLVFEKIENKDLISWNTMVAGYGIHG---LGENAIR 498
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFL----RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+IL+L R HA L + L SN IL + S CG+++ +A ++F++
Sbjct: 69 EILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSN-ILINMYSKCGSVD---FARQVFDE 124
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M + S++ +N+MI + + NG E + L ++ G E+T + +L AC L
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
Q +H I++ + + ++++Y CG M D + VF+ M
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP----------------- 227
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+RSVV+W+ M + ++ +AL LF + + + D+ + +V+
Sbjct: 228 --------------DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVI 273
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA L A+ G+ +++ SG + V ++L+D Y KCG ++ + VF+++ ++NV
Sbjct: 274 CACAGLAAMIEGKQMNALLSKSGFCSNIF-VASSLIDMYAKCGGIEESYKVFRDVEKRNV 332
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V WNAMISGL+ + R + L+E+M G+SPN TFV VL+ C H GLV K ++ F
Sbjct: 333 VLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDL 392
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
MT H + PN+ HY CMVD L R+G + EAYDLI + +A++WGSLL+SCRTHG++E
Sbjct: 393 MTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLE 452
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LAE A K+L ++EP NSGNY+LLSN+YA G+WD+ +R ++E++VKK G+S IE
Sbjct: 453 LAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIE 510
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 258/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H+ LR L ++ ++ +E+ A +F++M ++ +N+M+ YS G
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGG 188
Query: 80 PSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E+ +LF +L +L + P+ T +L+AC DL G VH + S + S+
Sbjct: 189 SYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLW 248
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
V+ LY CG +D ++F+EM +D I MI G+ G V++ + LFRE +
Sbjct: 249 NAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLP 308
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN +IS L ++ R A+ +F M+ + T+ ++LP+ + + G+ IH YA
Sbjct: 309 TWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYA 368
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ Y + + V A++D Y KCG L A+ VF +I +++++W ++IS A +G +
Sbjct: 369 IRN-TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ L+ +M+ G+ P++ TF VL CAH+G +++A ++F + + I P +EHY CMV
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
VL R+G + +A + I M + P A +WG+LL+ G VEL ++ L +EP N+GN
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+++N+Y++ GRW DA+T+R M+E +KK PG S IE
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 195/449 (43%), Gaps = 74/449 (16%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + N + + +S I+ A +F ++ ++ +N+++ +Y+L+
Sbjct: 24 QLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHN 83
Query: 80 PSEEPVKLFALLKN---LGIWPDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFG 135
+ +KLF+ L N + PD +T LKA + + + + VH I+R G E
Sbjct: 84 MHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDI 143
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ Y+ C ++ +FD M RD++ N M+ G+ + G +K LFR
Sbjct: 144 FVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFR----- 198
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+M+SSL E++ A T V+VL CA+ + G +H
Sbjct: 199 ------VMLSSL--------------EVKPNAL-----TAVSVLQACAQSNDLIFGIEVH 233
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV--------------- 300
+ S + + VS+ NA++ Y KCG LD AR +F+E+ K+ +
Sbjct: 234 RFVNESQI-KMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFV 292
Query: 301 ----------------SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+WNA+ISGL N R E V+++ M + G PN T +L
Sbjct: 293 NQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVF 352
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA---YDLIRSMSIRPN 401
+H ++ +E+ ++ N+ ++D + G + A +D I+ S+
Sbjct: 353 SHFSTLKGGKEIHGYAIR-NTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSL--- 408
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELIN 430
W S++S+ HG +A E++
Sbjct: 409 -IAWTSIISAYAVHGDANVALSLFYEMLT 436
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 247/433 (57%), Gaps = 5/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A +F ++ +++N+MI Y +G E +LF + + DE+TF +L
Sbjct: 243 DVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLS 302
Query: 109 ACLGVGDLRVGQCVHGEIIR--SGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
AC G G+ VHG+I R F ++ + +V LY+ CG + ++FD M +
Sbjct: 303 ACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK 362
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ + +DK + +F EM ++ +SW +M+S G +AL+LF+ MR
Sbjct: 363 DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMR 422
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + + T + C LG++ G+ +H + G + S GNAL+ Y +CG +
Sbjct: 423 AEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLG-FEGSNSAGNALITMYARCGAV 481
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F +P + VSWNAMIS L +G G +EL+++M+A+G+ P++ +F+ VLT C
Sbjct: 482 KEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H+GLV++ + F SM I+P +HY ++D+LGR+G + EA DLI++M P +I
Sbjct: 542 NHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W ++LS CRT G +EL HA +L + P + G Y+LLSN Y+ GRW DA +R MR+
Sbjct: 602 WEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 661
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 662 RGVKKEPGCSWIE 674
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 196/439 (44%), Gaps = 54/439 (12%)
Query: 40 FVSVCGTLNEIKYATKIFN---QMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLG 95
V+ + A F+ Q R +VL N++I AY+ + V +F +LL +
Sbjct: 94 LVAAYAAAGRLPAAVSFFDAVPQARRDTVL-HNAVISAYARASHAAPAVAVFRSLLASGS 152
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGE--IIRSGFERFGSIRIGVVELYTSCGQMD- 152
+ PD+Y+F LL A + ++ V C + +++SG S+ +V LY C ++
Sbjct: 153 LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212
Query: 153 --DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
D KV DEM +D + M+ G+ ++GDV +F E+ + V WN MIS S
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHS 272
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH---SYAESSGLYRKV 267
G EA LF M + LDE T +VL CA G G+ +H + + + +
Sbjct: 273 GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAA 332
Query: 268 VSVGNALVDFYCKCG-------------------------------ILDTARNVFKEIPR 296
+ V NALV Y KCG LD A VF+E+P
Sbjct: 333 LPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPY 392
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
KN +SW M+SG G E ++L+ +M A+ V P T+ G ++ C G ++ ++L
Sbjct: 393 KNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQL 452
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN--AAIWGSLLSSCRT 414
+ L N ++ + R G V+EA + M PN + W +++S+
Sbjct: 453 HGHLVQLGFEGSN-SAGNALITMYARCGAVKEANLMFLVM---PNIDSVSWNAMISALGQ 508
Query: 415 HGH----VELAEHAVKELI 429
HGH +EL + V E I
Sbjct: 509 HGHGREALELFDRMVAEGI 527
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 156/379 (41%), Gaps = 70/379 (18%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
HG++ +T++ +F+ N L S CG I A +IF+ M++ V+ +N
Sbjct: 312 HGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGN---IAVARRIFDNMKSKDVVSWN 368
Query: 70 S-------------------------------MIKAYSLNGPSEEPVKLFALLKNLGIWP 98
+ M+ Y G SE+ +KLF ++ + P
Sbjct: 369 TILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKP 428
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+YT+A + AC +G L+ G+ +HG +++ GFE S ++ +Y CG + + +F
Sbjct: 429 CDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMF 488
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
M + D + N M IS+LG+ G EAL
Sbjct: 489 LVMPNIDSVSWNAM-------------------------------ISALGQHGHGREALE 517
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDF 277
LF M + D + + VL C G VD G Q+ S G+ L+D
Sbjct: 518 LFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY-TRLIDL 576
Query: 278 YCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+ G + AR++ K +P + S W A++SG +G ELG +Q+ K + T
Sbjct: 577 LGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLF-KMTPQHDGT 635
Query: 337 FVGVLTCCAHAG-LVEKAR 354
++ + + AG V+ AR
Sbjct: 636 YILLSNTYSAAGRWVDAAR 654
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 29/227 (12%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H Q+H H ++ SN +++ +K A +F M N + +N+MI A
Sbjct: 448 HGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALG 507
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+G E ++LF + GI+PD +F +L A C H ++ GF+ F S
Sbjct: 508 QHGHGREALELFDRMVAEGIYPDRISFLTVLTA-----------CNHSGLVDEGFQYFES 556
Query: 137 IR------------IGVVELYTSCGQMDDGMKVFDEMSHRDVI-VRNLMIHGFCKKGDVD 183
++ +++L G++ + + M + ++ G GD++
Sbjct: 557 MKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDME 616
Query: 184 KGLY----LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
G + LF+ M + ++ L+ ++ +GR +A R+ MRD+
Sbjct: 617 LGAHAADQLFK-MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 662
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 253/458 (55%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H + +R+ +H +++ V + +++ A +++ R V++ +++I Y LNG
Sbjct: 364 EVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNG 423
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
SE+ +++F L I P+ T A +L AC + L +GQ +HG ++R+ +E +
Sbjct: 424 MSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVES 483
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG++D +SH Y+F +M + V+
Sbjct: 484 ALMDMYAKCGRLD--------LSH-----------------------YIFSKMSLKDEVT 512
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MISS ++G EAL LF +M + + + T+ + L CA L A+ G+ IH
Sbjct: 513 WNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI- 571
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + + +AL+D Y KCG ++ A VF+ +P KN VSWN++IS +G + V
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESV 631
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+M +G P+ TF+ +++ CAHAGLVE+ +LF MT + I P +EH+ CMVD+
Sbjct: 632 SFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDL 691
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
RSG + +A I M +P+A IWG+LL +CR H +VELA+ A +EL L+P NSG Y
Sbjct: 692 YSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYY 751
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SNI A GRWD +R M++N + K PG S ++
Sbjct: 752 VLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVD 789
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 34/401 (8%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
Q+H+ ++ L Q + +S+ + A ++F + ++ +N MI N
Sbjct: 262 VQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQN 321
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G +E + LF + G PD T LL A + L+ G+ VHG IIR+ +
Sbjct: 322 GLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLV 381
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V++Y C + ++D DV++ + +I G+ G +K L +FR + E
Sbjct: 382 SALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLE---- 437
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
Q + + TV +VLP CA + A+ +GQ IH Y
Sbjct: 438 ---------------------------QCIKPNAVTVASVLPACASISALPLGQEIHGYV 470
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ Y V +AL+D Y KCG LD + +F ++ K+ V+WN+MIS + NG +
Sbjct: 471 LRNA-YEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEA 529
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++L+ QM +G+ N T L+ CA + +E+ + I ++ ++D
Sbjct: 530 LDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK-GPIKADIFAESALID 588
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + G + A + M + N W S++S+ HG V+
Sbjct: 589 MYAKCGNMELALRVFEFMPDK-NEVSWNSIISAYGAHGLVK 628
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 207/507 (40%), Gaps = 101/507 (19%)
Query: 4 KILRLLHGRNTRTHLT---QIHAH-FLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIF 57
++L LL G + HL QIHA + L N + H + + + A +F
Sbjct: 34 RLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVF 93
Query: 58 NQMRNP---SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW-------PDEYTFAPLL 107
+ + S L +N +I+ ++ G A+L + +W PD +T ++
Sbjct: 94 SALPRAAAGSSLPWNWLIRGFTAAGHHS-----LAVLFYVKMWTHPAAPSPDAHTLPYVV 148
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
K+C +G + +G+ VH +G + ++++Y+ G + D FD M RD +
Sbjct: 149 KSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCV 208
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+ N+M+ G+ K GDV + LFR MR
Sbjct: 209 LWNVMMDGYIKAGDVGGAVRLFRNMRVSGC------------------------------ 238
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E + AT+ L +CA + G +HS A GL ++ V+V N L+ Y KC LD A
Sbjct: 239 -EPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQE-VAVANTLLSMYAKCRCLDDA 296
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F+ +PR ++V+WN MISG NG + + L+ M+ G P+ T V +L
Sbjct: 297 WRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDL 356
Query: 348 GLVEKARELFASMTGLHSIVPNLEHY-----GCMVDVLGRSGCVREA---YDLIRSMS-- 397
+++ +E+ I+ N H +VD+ + VR A YD R++
Sbjct: 357 NGLKQGKEVHG------YIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVV 410
Query: 398 -----------------------------IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
I+PNA S+L +C + + L + +
Sbjct: 411 IGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQE-IHGY 469
Query: 429 INLEPWNSGNYV--LLSNIYAEGGRWD 453
+ + YV L ++YA+ GR D
Sbjct: 470 VLRNAYEGKCYVESALMDMYAKCGRLD 496
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 256/459 (55%), Gaps = 33/459 (7%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIW---------- 97
I+ A IF+++ NP+V+ +N++I Y+ NG +E LF + KN W
Sbjct: 474 IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN 533
Query: 98 -------------------PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
P + +F L AC +GD+ +G+ +H I++G + +
Sbjct: 534 EESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM 593
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
G++ +Y CG ++DG VF + +D + N +I G + +D +F +M +R VV
Sbjct: 594 NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVV 653
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SW +IS+ ++G AL LF +M + + ++ TV ++L C LGA+ +G+ H+
Sbjct: 654 SWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALI 713
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G + + VGN+L+ Y KCG D VF+E+P ++++WNA++ G A NG G+
Sbjct: 714 FKLG-FDTFLFVGNSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEA 771
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++++EQM +G+ P++ +F+GVL C+HAGLV++ F SMT + I+P + HY CMVD
Sbjct: 772 IKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVD 831
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA LI +M ++P++ IW +LL +CR H +VEL + + L + S
Sbjct: 832 LLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSAT 891
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN++A G WD +R M++ + K PG S I+
Sbjct: 892 YVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQ 930
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 180/369 (48%), Gaps = 25/369 (6%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYT 102
G L ++ A ++FN+M V+ +NSMI YS NG +E LF KN+ W
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTW----- 236
Query: 103 FAPLLKACLGVGDLRVGQCVHG-EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
L G + G+ E+ S ER ++ Y G + + K+FDEM
Sbjct: 237 ------TILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM 290
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
++V N ++ G+C + + LF +M ER+ VSW +MIS EA +F
Sbjct: 291 PEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFV 350
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
+M D++ V VL L +++ + A +G Y V VG+A+++ Y +
Sbjct: 351 KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTG-YEGDVVVGSAILNAYTRN 409
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G LD A + F+ +P +N SW MI+ A GR + ++LYE++ + V AT ++
Sbjct: 410 GSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTV----ATKTAMM 465
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
T A G ++KAR +F + + PN+ + ++ ++G ++EA DL + M ++ N
Sbjct: 466 TAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-N 519
Query: 402 AAIWGSLLS 410
+A W ++++
Sbjct: 520 SASWAAMIA 528
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 169/399 (42%), Gaps = 94/399 (23%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+QM + + + MI Y E +F + PD+ F +L A G
Sbjct: 314 ARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITG 373
Query: 113 VGDLRV--------------GQCVHGEIIRSGFERFGSIRIGV----------------- 141
+ DL + G V G I + + R GS+ + +
Sbjct: 374 LDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTM 433
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ + CG++DD +++++ + + V + M+ + + G + K +F E+ +VV+WN
Sbjct: 434 IAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWN 493
Query: 202 LMISSLGKSGRDSEALRLFHEM--------------------RDQAFEL----------- 230
+I+ ++G EA LF +M +A EL
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVP 553
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG-------- 282
+++ + L CA +G V+IG+ IHS A +G V N L+ Y KCG
Sbjct: 554 SDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSY-VMNGLISMYAKCGNVEDGSHV 612
Query: 283 -----------------------ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+LD AR VF+++P+++VVSW A+IS G GE+ +
Sbjct: 613 FRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVAL 672
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+L+ M+A+G+ PN+ T +L+ C + G ++ + A
Sbjct: 673 DLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHA 711
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 52/254 (20%)
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N I + G V++ +F EM +R VVSWN MI+ ++G+ EA LF AF
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF-----DAF- 228
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+G+ I ++ L+ Y K G ++ AR
Sbjct: 229 --------------------VGKNIRTWT--------------ILLTGYAKEGRIEEARE 254
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF+ + +NVVSWNAMISG NG + +L+++M K V A++ V+T H
Sbjct: 255 VFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNV----ASWNSVVTGYCHCYR 310
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWG 406
+ +ARELF M +S+ + M+ EA+D+ M RP+ +I+
Sbjct: 311 MSEARELFDQMPERNSV-----SWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFV 365
Query: 407 SLLSSCRTHGHVEL 420
+LS+ +EL
Sbjct: 366 VVLSAITGLDDLEL 379
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 256/464 (55%), Gaps = 33/464 (7%)
Query: 20 QIHAHFL------RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
Q+HA F+ H L L+ A+ T+++I YA IF ++ +P V ++N+MI+
Sbjct: 31 QLHAQFVVSGLLGYHPLCARRLLEAYV-----TMSQIYYAFSIFERIPSPDVFVYNTMIR 85
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
G+ D +T+ +LKAC + G+ VH +II++G
Sbjct: 86 ---------------------GLTMDNFTYTFVLKACSHLKAPFEGKQVHCQIIKAGIVP 124
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
I ++ +YT+ G +DD +V E S + + +N MI G+ +G VDK +F +M
Sbjct: 125 DTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISGYLTEGRVDKARKMFDDMA 184
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+ SW+ +I+ K+G +EAL LF +M +EA +V++L C +LG + G+W
Sbjct: 185 AKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAALVSLLSACGQLGTLHQGRW 244
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IH+Y + + + + AL+D Y K G ++ +F+++ R++VV+W MIS A +G
Sbjct: 245 IHAYIDKTRVLMST-KLTTALIDMYAKSGSIECGYGLFQKMARRDVVTWGVMISAFAIHG 303
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+L+++M+A G+ PNK FV +L+ C+HAG VE+ R+ F+ M I P++EHY
Sbjct: 304 HASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIEHY 363
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GCMVD+LGR+G + +A LI SM +PN+ IWGSLL +CRTH ++ A + L+ LEP
Sbjct: 364 GCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHNDLKRGTWAFENLMELEP 423
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + L ++A G ++A +R + E + + G S IE
Sbjct: 424 TSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFIE 467
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 264/483 (54%), Gaps = 43/483 (8%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
FL L+ A V+V G I +A +F+Q+ P ++N++I+ + +
Sbjct: 6 FLSDPSELRELLFASAVAVRGA---IAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDA 62
Query: 85 VKLFALL----KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
V L+ + G+ PD+ TF +L+AC +G G VH ++++G E ++
Sbjct: 63 VSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNA 122
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ ++ SCG + +FD + D + + MI G ++GD+ LF E + +VSW
Sbjct: 123 LIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVKDLVSW 182
Query: 201 NLMISSLGKSG--------------RDS-----------------EALRLFHEMRDQAFE 229
N+MI++ K G RD AL LF +M+ +
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK---VVSVGNALVDFYCKCGILDT 286
D T++++L CA G +D+GQ +HS S ++ + V +GNAL+D Y KCG + +
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHS--SLSDMFSRNGFPVVLGNALIDMYAKCGSMKS 300
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF + K+V +WN+++ GLA +G ++++E+M+ V P++ TFV VL C+H
Sbjct: 301 AHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSH 360
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
G+V+K RE F M + + PN++HYGC+VD+LGR+G ++EA++ I +M PN+ IW
Sbjct: 361 GGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWR 420
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LLS+CR HG +ELA+HA ++L+ SG+YVLLSNIYA G W +E +R M ++
Sbjct: 421 TLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSG 480
Query: 467 VKK 469
V K
Sbjct: 481 VNK 483
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 134/374 (35%), Gaps = 98/374 (26%)
Query: 19 TQIHAHFLRH-------------KLHQS--NLILA----------------HFVSVCGTL 47
Q+HAH ++ +H S NL +A ++ C
Sbjct: 102 VQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARR 161
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG------------PSEEPV---------- 85
+I A +F++ ++ +N MI AY+ G P + V
Sbjct: 162 GDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYV 221
Query: 86 ---------KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG- 135
+LF ++ +G PD T LL AC GDL VGQ +H + F R G
Sbjct: 222 RCGSHLHALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSS-LSDMFSRNGF 280
Query: 136 SIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ +G ++++Y CG M +VF M +DV
Sbjct: 281 PVVLGNALIDMYAKCGSMKSAHEVFWSMRDKDV--------------------------- 313
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+WN ++ L G E++ +F +M DE T VAVL C+ G VD G+
Sbjct: 314 ----STWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGRE 369
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFN 312
+ + + +VD + G+L A + N V W ++S +
Sbjct: 370 FFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRTLLSACRVH 429
Query: 313 GRGELGVELYEQMI 326
G EL Q++
Sbjct: 430 GEIELAKHANRQLL 443
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 235/429 (54%), Gaps = 36/429 (8%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+++ V+ +N+MI Y +G EE + F ++ + P++ T +L AC
Sbjct: 212 ARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGH 271
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ L +G+ + + GF + + +V++Y+ CG++ K
Sbjct: 272 LRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARK---------------- 315
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
LF M ++ V+ WN MI EAL LF M + ++
Sbjct: 316 ---------------LFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPND 360
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAES----SGLYRKVVSVGNALVDFYCKCGILDTAR 288
T +AVLP CA LGA+D+G+W+H+Y + +G V S+ +++ Y KCG ++ A
Sbjct: 361 VTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV-SLWTSIIVMYAKCGCVEVAE 419
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF+ + +++ SWNAMISGLA NG E + L+E+MI +G P+ TFVGVL+ C AG
Sbjct: 420 QVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAG 479
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
VE F+SM + I P L+HYGCM+D+L RSG EA L+ +M + P+ AIWGSL
Sbjct: 480 FVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSL 539
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L++CR HG VE E+ + L LEP NSG YVLLSNIYA GRWDD +R + + +K
Sbjct: 540 LNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMK 599
Query: 469 KSPGQSLIE 477
K PG + IE
Sbjct: 600 KVPGCTSIE 608
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 222/421 (52%), Gaps = 11/421 (2%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRN--PSVLLFNSMIK 73
L QIH+ ++ LH + + + C ++ YA +F+ + + P++ ++N++I+
Sbjct: 41 LKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIR 100
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
A+SL + LF+ + + G++P+ +TF L K+C + +H ++
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ ++ +Y+ G++ VFD+ + RD + +I G+ +G VD LF E+
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
+ VVSWN MI+ +SGR EAL F M++ +++T+V+VL C L ++++G+W
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
I S+ G + K + + NALVD Y KCG + TAR +F + K+V+ WN MI G
Sbjct: 281 IGSWVRDRG-FGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLS 339
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA----SMTGLHSIVPN 369
E + L+E M+ + V+PN TF+ VL CA G ++ + + A ++ G + V N
Sbjct: 340 LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGN-VNN 398
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ + ++ + + GCV A + RSM R + A W +++S +GH E A +E+I
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSR-SLASWNAMISGLAMNGHAERALGLFEEMI 457
Query: 430 N 430
N
Sbjct: 458 N 458
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A ++F M + S+ +N+MI ++NG +E + LF + N G PD+ TF +L A
Sbjct: 415 VEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSA 474
Query: 110 CLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-H 163
C G + +G + I + +G + ++L G+ D+ + M
Sbjct: 475 CTQAGFVELGHRYFSSMNKDYGISPKLQHYGCM----IDLLARSGKFDEAKVLMGNMEME 530
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYL---FREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
D + +++ G V+ G Y+ E+ + ++ L+ + +GR + ++
Sbjct: 531 PDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIR 590
Query: 221 HEMRDQAFE 229
++ D+ +
Sbjct: 591 TKLNDKGMK 599
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 244/426 (57%), Gaps = 2/426 (0%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F+ M V+ +N+M+ Y+ +G E + F L+ GI +E++FA LL AC+
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVK 191
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
L++ Q HG+++ +GF + +++ Y CGQM+ + FDEM+ +D+ + +
Sbjct: 192 SRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ K GD++ LFREM E++ VSW +I+ + G AL LF +M + ++
Sbjct: 252 ISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQ 311
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T + L A + ++ G+ IH Y + + R V ++L+D Y K G L+ + VF+
Sbjct: 312 FTFSSCLCASASIASLRHGKQIHGYMIRTNV-RPNAIVTSSLIDMYSKSGSLEASERVFR 370
Query: 293 E-IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+++ V WN MIS LA +G G +++ + MI V PN+ T V +L C+H+GLVE
Sbjct: 371 ICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVE 430
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SMT H IVP+ EHY C++D+LGR+GC +E I M P+ IW ++L
Sbjct: 431 EGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGV 490
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR HG+ EL + A +ELI L+P +S Y+LLS+IYA+ G+W+ E LR M++ V K
Sbjct: 491 CRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEK 550
Query: 472 GQSLIE 477
S IE
Sbjct: 551 AVSWIE 556
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 200/443 (45%), Gaps = 42/443 (9%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
I N + P + + S++ ++ + V L GI A LL+ C
Sbjct: 3 ISNPRKRP-ICVARSLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKS 61
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L+ G+ +H + +GF+R ++ ++ +Y CG+ D KVFD+M R++ N M+
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
GF K G + + +F M ER VVSWN M+ + G EAL F E+R + +E +
Sbjct: 122 GFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFS 181
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR------ 288
+L C + + + Q H +G VV + +++D Y KCG +++A+
Sbjct: 182 FAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVV-LSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 289 -------------------------NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+F+E+P KN VSW A+I+G G G+L ++L+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFR 300
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+MIA V P + TF L A + +++ M ++ PN ++D+ +S
Sbjct: 301 KMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRT-NVRPNAIVTSSLIDMYSKS 359
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVL 441
G + + + R + + +W +++S+ HG A + ++I + P + V+
Sbjct: 360 GSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVI 419
Query: 442 L-----SNIYAEGGRWDDAETLR 459
L S + EG RW ++ T++
Sbjct: 420 LNACSHSGLVEEGVRWFESMTVQ 442
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 37/324 (11%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
I +S L +++ A K+F +M + + + ++I Y G + + LF + +
Sbjct: 247 IWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMR 306
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+++TF+ L A + LR G+ +HG +IR+ + ++++Y+ G ++
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASE 366
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VF C DK + V WN MIS+L + G +
Sbjct: 367 RVFR----------------IC----YDK----------QDCVLWNTMISALAQHGLGHK 396
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNAL 274
AL++ +M + T+V +L C+ G V+ G +W S G+ L
Sbjct: 397 ALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYA-CL 455
Query: 275 VDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
+D + G + +E+P + WNA++ +G ELG + E++I K +
Sbjct: 456 IDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELI-KLDPES 514
Query: 334 KATFVGVLTCCAHAG---LVEKAR 354
A ++ + + A G LVEK R
Sbjct: 515 SAPYILLSSIYADHGKWELVEKLR 538
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 258/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R + + + + K A ++FN +++ + + + +I
Sbjct: 281 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 340
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ V+LF ++ + D++ A L+ C DL +G+ +H ++SG R +
Sbjct: 341 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 400
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ LY CG + + VF MS RD++ MI + + G++ K F M R+ ++
Sbjct: 401 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT 460
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + L+++ M Q D T V + CA +GA +G I +
Sbjct: 461 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 520
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+GL V SV NA + Y KCG + A+ +F + K+VVSWNAMI+G + +G G+
Sbjct: 521 VKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQA 579
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ ++ M++KG P+ ++V VL+ C+H+GLV++ + F MT +H I P LEH+ CMVD
Sbjct: 580 AKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVD 639
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 640 LLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGS 699
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LL+ IY++ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 700 YMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 738
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 201/454 (44%), Gaps = 59/454 (12%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
R LHGR L A FL+ N +L ++S CG L++ + + ++ P+V+
Sbjct: 40 RALHGRLVTVGLAS--AVFLQ------NTLLHAYLS-CGALSDARRLLRA--DIKEPNVI 88
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALL--KNLGIW----PDEYTFAPLLKACLGVGDLRVGQ 120
N M+ Y+ G + +LF + +++ W D A +C +G +
Sbjct: 89 THNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAP 148
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+ G + F + +V+++ CG +D ++F ++ + RN M+ G+ K
Sbjct: 149 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 208
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+D + F +M ER VVSWN+MI++L +SGR EAL L EM + LD T + L
Sbjct: 209 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 268
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CARL ++ G+ +H+ S L + V +AL++ Y KCG A+ VF + +N V
Sbjct: 269 ACARLFSLGWGKQLHAKVIRS-LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC---------------- 344
SW +I G VEL+ QM A+ ++ ++ +++ C
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387
Query: 345 -------------------AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
A G ++ A +F+SM+ ++ + M+ + G
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-----RDIVSWTSMITAYSQIGN 442
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ +A + M+ R NA W ++L + HG E
Sbjct: 443 IIKAREFFDGMATR-NAITWNAMLGAYIQHGAEE 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 28/351 (7%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
A L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS----------SLGKS 210
+ +VI N+M++G+ K+G + LF M R V SWN ++S S G
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G A +L F D A++ + R G VD + S E R +
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE-----RPTIFC 196
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
N+++ Y K +D A F+++ ++VVSWN MI+ L+ +GR + L +M KGV
Sbjct: 197 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 256
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY--GCMVDVLGRSGCVRE 388
+ T+ LT CA + ++L A + +P ++ Y ++++ + G +E
Sbjct: 257 RLDSTTYTSSLTACARLFSLGWGKQLHAKVI---RSLPQIDPYVASALIELYAKCGSFKE 313
Query: 389 AYDLIRSMSIRPNAAIW-----GSLLSSCRTHGHVELAEHAVKELINLEPW 434
A + S+ R N+ W GSL C + VEL EL+ ++ +
Sbjct: 314 AKRVFNSLQDR-NSVSWTVLIGGSLQYECFSKS-VELFNQMRAELMAIDQF 362
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 27/241 (11%)
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVV 300
C GA+ + +H + GL V + N L+ Y CG L AR + + +I NV+
Sbjct: 30 CGSRGALAGARALHGRLVTVGLASAVF-LQNTLLHAYLSCGALSDARRLLRADIKEPNVI 88
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVS------PNKATFVGVLTCCAHAGLVEKAR 354
+ N M++G A G EL+++M + V+ + + G C G R
Sbjct: 89 THNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALG----CR 144
Query: 355 ELFASMTGLHSIV-----PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
EL + GL P++E +VD+ R G V A L + RP S+L
Sbjct: 145 ELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFASRLFSQIE-RPTIFCRNSML 201
Query: 410 SSCRTHGHVEL--AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
+ G+ +L +HA++ ++ + ++ ++ ++ GR +A L + M V
Sbjct: 202 A-----GYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 256
Query: 468 K 468
+
Sbjct: 257 R 257
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 234/429 (54%), Gaps = 33/429 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M + +NSMI Y+ G +E ++LF + + G P+ T A +
Sbjct: 166 DVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFS 225
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C GDL G+ I + + ++E+Y C +D+ + FD
Sbjct: 226 ICAKTGDLETGKWARSLIAEQDLQNM-IVHTALMEMYVKCQAIDEARREFDR-------- 276
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M++R VV+W+ MI+ ++GR E+L LF M+ +
Sbjct: 277 -----------------------MQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ +E T+V VL CA+LG+ ++G I S+ ES L +G+AL+D Y KCG + AR
Sbjct: 314 KPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNL-PLTSYLGSALIDMYTKCGHVGRAR 372
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF + K V++WN+M+ GLA NG + + LY++M + V PN+ TFV +LT C HAG
Sbjct: 373 SVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAG 432
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ F M +H + P +EH C+VD+L +SG +REAY I M + PNA IW +L
Sbjct: 433 LVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTL 492
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+CR H VELA+ A +L+ LEP NS YVLLSNIYA+ G W D +R MR NV+
Sbjct: 493 LSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQ 552
Query: 469 KSPGQSLIE 477
K S IE
Sbjct: 553 KLSAYSWIE 561
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 189/411 (45%), Gaps = 35/411 (8%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+ A +F+ + P+ L ++I A S +E + F+ L G ++K+C
Sbjct: 36 RAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSC 95
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+ R G+ VH I G ++ +V+ Y G MD +KVFDEM +D I N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+I G+ K GDV K LF M R+ SWN MI+ G EALRLF M +
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ T+ + ICA+ G ++ G+W S L +V AL++ Y KC +D AR
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH--TALMEMYVKCQAIDEARRE 273
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL- 349
F + +++VV+W+ MI+G A NGR +EL+E+M A PN+ T VGVL+ CA G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 350 ---------VEKARELFASMTG---------------LHSIVPNLEH-----YGCMVDVL 380
VE S G S+ +EH + M+ L
Sbjct: 334 ELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGL 393
Query: 381 GRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+G ++A L + M+ ++PN + +LL++C G V+ KE+
Sbjct: 394 ALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEM 444
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QI +H L ++ + + + + + A +FN+M + V+ +NSM++ +LNG
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+++ + L+ + + P+E TF LL AC G + G E+
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEM 444
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 240/428 (56%), Gaps = 32/428 (7%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ +F S++ + +MI Y EE +LF + ++P++ T L+ +
Sbjct: 182 IRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIIS 241
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C VG +++G+ +H I+R+GF ++ +V++Y CG++ +FD M
Sbjct: 242 CGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSM-------- 293
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ + V++W MIS+ ++ A +LF +MRD
Sbjct: 294 -----------------------KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+E T+V++L +CA GA+D+G+W H+Y + G+ V+ + AL+D Y KCG + A+
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVI-LKTALIDMYAKCGDISGAQR 389
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F E +++ +WN M++G +G GE ++L+ +M GV PN TF+G L C+HAGL
Sbjct: 390 LFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGL 449
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V + + LF M +VP +EHYGCMVD+LGR+G + EAY +I SM + PN AIWG++L
Sbjct: 450 VVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
++C+ H + + E A +EL+ LEP N G VL+SNIYA RW+D +R +++ +KK
Sbjct: 510 AACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKK 569
Query: 470 SPGQSLIE 477
PG S IE
Sbjct: 570 EPGMSSIE 577
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 21/375 (5%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
FN + S F S + Y+LN + ++ L I D + +LKAC +
Sbjct: 75 FNHAQQVSFSPFESHPR-YALN--------TYTYMRKLDIEVDSFIIPSVLKACSQISVA 125
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
R+G+ +HG +++G + ++++Y+ CG + +FD+MS RDV+ + MI +
Sbjct: 126 RMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAY 185
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ LF +RS+VSW MI+ + E RLF M ++ ++ T++
Sbjct: 186 ---------ITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITML 236
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+++ C +GAV +G+ +H+Y +G + +++ ALVD Y KCG + +AR +F +
Sbjct: 237 SLIISCGFVGAVQLGKRLHAYILRNG-FGMSLALATALVDMYGKCGEIRSARAIFDSMKN 295
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
K+V++W AMIS A + +L+ QM GV PN+ T V +L+ CA G ++ +
Sbjct: 296 KDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK-W 354
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F + + ++ ++D+ + G + A L S +I + W +++ HG
Sbjct: 355 FHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF-SEAIDRDICTWNVMMAGYGMHG 413
Query: 417 HVELAEHAVKELINL 431
+ E A E+ L
Sbjct: 414 YGEKALKLFTEMETL 428
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 137/314 (43%), Gaps = 42/314 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA+ LR+ S + V + G EI+ A IF+ M+N V+ + +MI AY+
Sbjct: 253 RLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQAN 312
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ +LF +++ G+ P+E T LL C G L +G+ H I + G E ++
Sbjct: 313 CIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKT 372
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG + ++F E RD+ N+M+ G+ G +K L LF EM
Sbjct: 373 ALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEME------ 426
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-----QWI 254
+LG D T + L C+ G V G + I
Sbjct: 427 ------TLGVKPND-------------------ITFIGALHACSHAGLVVEGKGLFEKMI 461
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNG 313
H + GL KV G +VD + G+LD A + + +P N+ W AM++ +
Sbjct: 462 HDF----GLVPKVEHYG-CMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHK 516
Query: 314 RGELGVELYEQMIA 327
+G +++A
Sbjct: 517 NSNMGELAARELLA 530
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 258/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R + + + + K A ++FN +++ + + + +I
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ V+LF ++ + D++ A L+ C DL +G+ +H ++SG R +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ LY CG + + VF MS RD++ MI + + G++ K F M R+ ++
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAIT 470
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + L+++ M Q D T V + CA +GA +G I +
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+GL V SV NA + Y KCG + A+ +F + K+VVSWNAMI+G + +G G+
Sbjct: 531 VKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQA 589
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ ++ M++KG P+ ++V VL+ C+H+GLV++ + F MT +H I P LEH+ CMVD
Sbjct: 590 AKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVD 649
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 650 LLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGS 709
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LL+ IY++ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 710 YMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 207/480 (43%), Gaps = 85/480 (17%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
R LHGR L A FL+ N +L ++S CG L++ + + ++ P+V+
Sbjct: 24 RALHGRLVTVGLAS--AVFLQ------NTLLHAYLS-CGALSDARRLLRA--DIKEPNVI 72
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALL--KNLGIW--------------------------- 97
N M+ Y+ G + +LF + +++ W
Sbjct: 73 THNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSG 132
Query: 98 ---PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
P+ +TF ++K+C +G + + G + F + +V+++ CG +D
Sbjct: 133 DSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFA 192
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
++F ++ + RN M+ G+ K +D + F +M ER VVSWN+MI++L +SGR
Sbjct: 193 SRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVR 252
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EAL L EM + LD T + L CARL ++ G+ +H+ S L + V +AL
Sbjct: 253 EALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS-LPQIDPYVASAL 311
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
++ Y KCG A+ VF + +N VSW +I G VEL+ QM A+ ++ ++
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 335 ATFVGVLTCC-----------------------------------AHAGLVEKARELFAS 359
+++ C A G ++ A +F+S
Sbjct: 372 FALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSS 431
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M+ ++ + M+ + G + +A + M+ R NA W ++L + HG E
Sbjct: 432 MSE-----RDIVSWTSMITAYSQIGNIIKAREFFDGMATR-NAITWNAMLGAYIQHGAEE 485
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 56/378 (14%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
A L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ +VI N+M++G+ K+G + LF M R V SWN ++S ++ R + L F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 221 HEMRDQAFELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNAL 274
M L A T V+ C LG ++ + GL+ K V AL
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQL------LGLFWKFDFWGDPDVETAL 179
Query: 275 VDFYCKCGILDTARNVFKEIPR-------------------------------KNVVSWN 303
VD + +CG +D A +F +I R ++VVSWN
Sbjct: 180 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MI+ L+ +GR + L +M KGV + T+ LT CA + ++L A +
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI-- 297
Query: 364 HSIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW-----GSLLSSCRTHG 416
+P ++ Y ++++ + G +EA + S+ R N+ W GSL C +
Sbjct: 298 -RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR-NSVSWTVLIGGSLQYECFSKS 355
Query: 417 HVELAEHAVKELINLEPW 434
VEL EL+ ++ +
Sbjct: 356 -VELFNQMRAELMAIDQF 372
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 268/477 (56%), Gaps = 18/477 (3%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRH--KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
RLL L QIHA + K H S + H +++ ++ A +F+ NPS
Sbjct: 57 RLLSSCKHLNPLLQIHAQIIVSGFKHHHS---ITHLINLYSLFHKCDLARSVFDSTPNPS 113
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+L+NSMI+AY+ + E ++++ +++ G+ D + A L+ +GDL+ + V
Sbjct: 114 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVF 173
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDD---GMKVFDEMSHRDVIVRNLMIHGFCKKG 180
++ + + ++ G+ Q +D +VFD+M +D + M+ G+ G
Sbjct: 174 DKMPKRDVVAWNAMIAGL-------SQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNG 226
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ L LF +M+ +V +WN++I++ ++G EA+ FH+MR + F + T V+VLP
Sbjct: 227 CFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLP 285
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
A L A G H+ G + VGN+L+D Y KCG LD + +F E+ K+ V
Sbjct: 286 AAAYLAAFREGMAFHACIIQMGFLSNTL-VGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV 344
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNAM+SG A +G G+ + L+ M V + +FV VL+ C HAGLVE+ R++F SM
Sbjct: 345 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 404
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ + I P+LEHY CMVD+LGR+G E I+ M + P+A +WG+LL SCR H +V+L
Sbjct: 405 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKL 464
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A+ L+ LEP N ++V+LS+IYA+ GRW DA R M + +KK+PG S +E
Sbjct: 465 GEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 521
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 205/324 (63%), Gaps = 1/324 (0%)
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
K+F ++S R+++V MI G+ + G V+ +F +M E+ +V W+ MIS +S +
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LF EM+ + D+ T+++V+ CARLG +D +WIH Y + +GL + V NA
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGL-GGALPVNNA 120
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG L AR VF+++ +NV+SW +MI+ A +G ++ + QM + + PN
Sbjct: 121 LIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPN 180
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
TFVGVL C+HAGLVE+ R FASMT H+I P EHYGCMVD+ GR+ +R+A +L+
Sbjct: 181 GVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELV 240
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+M + PN IWGSL+++C+ HG EL E A K+++ LEP + G V LSNIYA+ RW
Sbjct: 241 ETMPLAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQ 300
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
D LR M++ + K G S IE
Sbjct: 301 DVGELRNLMKQRGISKERGCSRIE 324
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 35/299 (11%)
Query: 23 AHFLRHKLHQSNLI-LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
A L K+ NL+ L +S + ++ A IF+QM ++ +++MI Y+ +
Sbjct: 2 AQKLFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKP 61
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
+E + LF+ ++ GI PD+ T ++ AC +G L + +H + ++G + +
Sbjct: 62 QEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNAL 121
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+++Y CG + VF++M R+VI MI+ F GD
Sbjct: 122 IDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDA------------------- 162
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAES 260
S AL+ F++M+D+ + + T V VL C+ G V+ G + S
Sbjct: 163 ------------SNALKFFYQMKDENIKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNE 210
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
+ K G +VD + + +L A + + +P NVV W ++++ +G ELG
Sbjct: 211 HNITPKHEHYG-CMVDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHGENELG 268
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 262/465 (56%), Gaps = 11/465 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
H +I +++ K Q ++IL + CG ++ A +IF++M +V+ +++MI
Sbjct: 276 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC---VESAREIFDRMEEKNVISWSAMI 332
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
AY +G + + LF ++ + G+ PD+ T A LL AC+ +L + VH + G
Sbjct: 333 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGML 392
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ + +V Y+ +DD +FD M RD + ++M+ GF K GD FRE+
Sbjct: 393 QNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFREL 452
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
N + G + +E+L LF +MR++ D+ +V V+ CA+LGA+ +
Sbjct: 453 IRCGARPDNYTLPFCGNA---NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 509
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
I Y + V+ +G A++D + KCG +++AR +F + KNV+SW+AMI+ ++
Sbjct: 510 TIDDYIQRKKFQLDVI-LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 568
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G+G ++L+ M+ G+ PNK T V +L C+HAGLVE+ F+ M +S+ +++H
Sbjct: 569 GQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKH 628
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y C+VD+LGR+G + EA LI SM++ + +WG+ L +CRTH V LAE A L+ L+
Sbjct: 629 YTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQ 688
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P N G+Y+LLSNIYA GRW+D R M + +KK PG + IE
Sbjct: 689 PQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 733
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 182/399 (45%), Gaps = 55/399 (13%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L++ RN T + Q+HA H + ++ ++ + + A +F+ M
Sbjct: 85 ISALVNCRNL-TQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRD 143
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ ++ M+ ++ G F L G PD YT +++AC + +L+
Sbjct: 144 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQ------- 196
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ +V++Y C +++D +FD+M RD++ +MI G+ + G ++
Sbjct: 197 --------------MALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANE 242
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
L LF +MRE VV D+ +V V+ CA+
Sbjct: 243 SLVLFEKMREEGVVP-------------------------------DKVAMVTVVFACAK 271
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
LGA+ + I Y + V+ +G A++D Y KCG +++AR +F + KNV+SW+A
Sbjct: 272 LGAMHKARIIDDYIQRKKFQLDVI-LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSA 330
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
MI+ ++G+G ++L+ M++ G+ P+K T +L C + + + R++ A + +H
Sbjct: 331 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQAS-VH 389
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
++ NL +V + +AY L M +R + +
Sbjct: 390 GMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 164/397 (41%), Gaps = 62/397 (15%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
EI+ A +F++M+ ++ + MI Y+ G + E + LF ++ G+ PD+ ++
Sbjct: 208 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVF 267
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G + + + I R F+ + ++++Y CG ++ ++FD M ++VI
Sbjct: 268 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVIS 327
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+ MI + G G+ +AL LF M
Sbjct: 328 WSAMIAAY-------------------------------GYHGQGRKALDLFRMMLSSGM 356
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
D+ T+ ++L C + + +H+ A G+ + ++ V N LV FY LD A
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLI-VANKLVHFYSYYRALDDAY 415
Query: 289 NVFKEIPRKNVVSWNAMISGLA----------------------------FNGRGELGVE 320
+F + ++ VSW+ M+ G A F G +
Sbjct: 416 GLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLV 475
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+++M +GV P+K V V+ CA G + KAR + ++ M+D+
Sbjct: 476 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI-DDYIQRKKFQLDVILGTAMIDMH 534
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GCV A ++ M N W +++++ HG
Sbjct: 535 AKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 570
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 24/253 (9%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+++V N +I+ + +D LF M R VSW++M+ K G F E+
Sbjct: 112 NIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 171
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D T+ V+ C R + ++ ALVD Y KC +
Sbjct: 172 RCGARPDNYTLPFVIRAC----------------------RDLKNLQMALVDMYVKCREI 209
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ AR +F ++ +++V+W MI G A G+ + L+E+M +GV P+K V V+ C
Sbjct: 210 EDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFAC 269
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
A G + KAR + ++ M+D+ + GCV A ++ M N
Sbjct: 270 AKLGAMHKAR-IIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME-EKNVIS 327
Query: 405 WGSLLSSCRTHGH 417
W +++++ HG
Sbjct: 328 WSAMIAAYGYHGQ 340
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 124/300 (41%), Gaps = 20/300 (6%)
Query: 16 THLTQIHAHFLRHKLHQSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
T + Q+HA H + Q NLI+A HF S L++ A +F+ M + ++ M
Sbjct: 377 TQVRQVHAQASVHGMLQ-NLIVANKLVHFYSYYRALDD---AYGLFDGMCVRDSVSWSVM 432
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
+ ++ G F L G PD YT L C G+ + ++ G
Sbjct: 433 VGGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFC---GNANESLVLFDKMREEGV 485
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR----DVIVRNLMIHGFCKKGDVDKGLY 187
+ VV G M + D + + DVI+ MI K G V+
Sbjct: 486 VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 545
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+F M E++V+SW+ MI++ G G+ +AL LF M ++ T+V++L C+ G
Sbjct: 546 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 605
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMI 306
V+ G S R V +VD + G LD A + + + K+ W A +
Sbjct: 606 VEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL 665
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 215/337 (63%), Gaps = 1/337 (0%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ Y G++D+ ++FDEM R+++ N M+ GF K G+V++ LF EM R VVSW
Sbjct: 103 IINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSW 162
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N M++ + G+ +EAL LF +MR + EATVV++L CA LGA+D G +H+Y
Sbjct: 163 NSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIND 222
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ + + VG ALVD Y KCG + A VF + K+V++WN +I+G+A +G + +
Sbjct: 223 NRIEVNSI-VGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQ 281
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+++M V PN TFV +L+ C+HAG+V++ ++L M+ + I P +EHY C++D+L
Sbjct: 282 LFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLL 341
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
R+G + EA +LI +M + PN + G+LL CR HG+ EL E K LINL+P +SG Y+
Sbjct: 342 ARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYI 401
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSNIYA +WDDA +R M+ N + K PG S+IE
Sbjct: 402 LLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIE 438
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 134/294 (45%), Gaps = 36/294 (12%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +L+ FV CG + E A +F++M V+ +NSM+ Y+ G E + LF ++
Sbjct: 132 NSMLSGFVK-CGNVEE---AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA 187
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+G+ P E T LL AC +G L G +H I + E + +V++Y CG++
Sbjct: 188 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 247
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+VF+ M +DV+ N +I G G V + LF+EM+E SV
Sbjct: 248 ATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASV---------------- 291
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
E ++ T VA+L C+ G VD GQ + SS V +
Sbjct: 292 ---------------EPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDC 336
Query: 274 LVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
++D + G+L+ A + +P N + A++ G +G ELG + +++I
Sbjct: 337 VIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLI 390
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+H + +++ ++++ V + +I AT++FN M + VL +N++I +++G
Sbjct: 215 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 274
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ----CVHGEI-IRSGFERF 134
+E +LF +K + P++ TF +L AC G + GQ C+ I E +
Sbjct: 275 HVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 334
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEM 161
V++L G +++ M++ M
Sbjct: 335 DC----VIDLLARAGLLEEAMELIGTM 357
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 258/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R + + + + K A ++FN +++ + + + +I
Sbjct: 291 QLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYE 350
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ V+LF ++ + D++ A L+ C DL +G+ +H ++SG R +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN 410
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ LY CG + + VF MS RD++ MI + + G++ K F M R+ ++
Sbjct: 411 SLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAIT 470
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + L+++ M Q D T V + CA +GA +G I +
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+GL V SV NA + Y KCG + A+ +F + K+VVSWNAMI+G + +G G+
Sbjct: 531 VKAGLILNV-SVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQA 589
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ ++ M++KG P+ ++V VL+ C+H+GLV++ + F MT +H I P LEH+ CMVD
Sbjct: 590 AKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVD 649
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 650 LLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGS 709
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LL+ IY++ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 710 YMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWME 748
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 207/470 (44%), Gaps = 65/470 (13%)
Query: 7 RLLHGRNTRTHL--------TQIHAHF-----------LRHKLHQSNLILAHFVSVCGTL 47
R LHGR L T +HA+F LR + + N+I H + + G
Sbjct: 24 RALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVI-THNIMMNGYA 82
Query: 48 NE--IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFA 104
+ + A ++F++M V +N+++ Y + ++ F + G P+ +TF
Sbjct: 83 KQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFC 142
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
++K+C +G + + G + F + +V+++ CG +D ++F ++
Sbjct: 143 CVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP 202
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+ RN M+ G+ K +D + F +M ER VVSWN+MI++L +SGR EAL L EM
Sbjct: 203 TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMH 262
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ LD T + L CARL ++ G+ +H+ S L + V +AL++ Y KCG
Sbjct: 263 RKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS-LPQIDPYVASALIELYAKCGSF 321
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A+ VF + +N VSW +I G VEL+ QM A+ ++ ++ +++ C
Sbjct: 322 KEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC 381
Query: 345 -----------------------------------AHAGLVEKARELFASMTGLHSIVPN 369
A G ++ A +F+SM+ +
Sbjct: 382 FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE-----RD 436
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + M+ + G + +A + M R NA W ++L + HG E
Sbjct: 437 IVSWTSMITAYSQIGNIIKAREFFDGMDTR-NAITWNAMLGAYIQHGAEE 485
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 162/378 (42%), Gaps = 56/378 (14%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
A L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ +VI N+M++G+ K+G + LF M R V SWN ++S ++ R + L F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 221 HEMRDQAFELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNAL 274
M L A T V+ C LG ++ + GL+ K V AL
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQL------LGLFWKFDFWGDPDVETAL 179
Query: 275 VDFYCKCGILDTARNVFKEIPR-------------------------------KNVVSWN 303
VD + +CG +D A +F +I R ++VVSWN
Sbjct: 180 VDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MI+ L+ +GR + L +M KGV + T+ LT CA + ++L A +
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI-- 297
Query: 364 HSIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW-----GSLLSSCRTHG 416
+P ++ Y ++++ + G +EA + S+ R N+ W GSL C +
Sbjct: 298 -RSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR-NSVSWTVLIGGSLQYECFSKS 355
Query: 417 HVELAEHAVKELINLEPW 434
VEL EL+ ++ +
Sbjct: 356 -VELFNQMRAELMAIDQF 372
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 234/429 (54%), Gaps = 33/429 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M + +NSMI Y+ G +E ++LF + + G P+ T A +
Sbjct: 166 DVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFS 225
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C GDL G+ I + + ++E+Y C +D+ + FD
Sbjct: 226 ICAKTGDLETGKWARSLIAEQDLQNM-IVHTALMEMYVKCRAIDEARREFDR-------- 276
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M++R VV+W+ MI+ ++GR E+L LF M+ +
Sbjct: 277 -----------------------MQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ +E T+V VL CA+LG+ ++G I S+ ES L +G+AL+D Y KCG + AR
Sbjct: 314 KPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNL-PLTSYLGSALIDMYTKCGHVGRAR 372
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF + K V++WN+M+ GLA NG + + LY++M + V PN+ TFV +LT C HAG
Sbjct: 373 SVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAG 432
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ F M +H + P +EH C+VD+L +SG +REAY I M + PNA IW +L
Sbjct: 433 LVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTL 492
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LS+CR H VELA+ A +L+ LEP NS YVLLSNIYA+ G W D +R MR NV+
Sbjct: 493 LSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQ 552
Query: 469 KSPGQSLIE 477
K S IE
Sbjct: 553 KLSAYSWIE 561
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 189/411 (45%), Gaps = 35/411 (8%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+ A +F+ + P+ L ++I A S +E + F+ L G ++K+C
Sbjct: 36 RAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKSC 95
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+ R G+ VH I G ++ +V+ Y G MD +KVFDEM +D I N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+I G+ K GDV K LF M R+ SWN MI+ G EALRLF M +
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ T+ + ICA+ G ++ G+W S L +V AL++ Y KC +D AR
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQDLQNMIVH--TALMEMYVKCRAIDEARRE 273
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL- 349
F + +++VV+W+ MI+G A NGR +EL+E+M A PN+ T VGVL+ CA G
Sbjct: 274 FDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSD 333
Query: 350 ---------VEKARELFASMTG---------------LHSIVPNLEH-----YGCMVDVL 380
VE S G S+ +EH + M+ L
Sbjct: 334 ELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGL 393
Query: 381 GRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+G ++A L + M+ ++PN + +LL++C G V+ KE+
Sbjct: 394 ALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEM 444
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QI +H L ++ + + + + + A +FN+M + V+ +NSM++ +LNG
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+++ + L+ + + P+E TF LL AC G + G E+
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEM 444
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/435 (35%), Positives = 241/435 (55%), Gaps = 36/435 (8%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A ++F+++ V+ +N+MI Y+ +G EE + F ++ + P+ T
Sbjct: 208 GFLDE---ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTML 264
Query: 105 PLLKACLGVGD-LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC G L++G V I G + G++++Y CG
Sbjct: 265 SVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCG-------------- 310
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D+++ LF ++++++VVSWN+MI EAL LF M
Sbjct: 311 -----------------DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRM 353
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS-GLYRKVVSVGNALVDFYCKCG 282
+ ++ T +++LP CA LGA+D+G+W+H+Y + + + V++ +L+D Y KCG
Sbjct: 354 MQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCG 413
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
L A+ +F + K++ +WNAMISG A +G + + L+ +M ++G P+ TFVGVLT
Sbjct: 414 DLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLT 473
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C HAGL+ R F+SM + + P L HYGCM+D+ GR+G EA L+++M ++P+
Sbjct: 474 ACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDG 533
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
AIW SLL +CR H +ELAE K L LEP N YVLLSNIYA GRW+D +R +
Sbjct: 534 AIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRL 593
Query: 463 RENNVKKSPGQSLIE 477
+N +KK PG S IE
Sbjct: 594 NDNRMKKVPGCSSIE 608
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 223/423 (52%), Gaps = 12/423 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNP 63
L LL T L QIH+ ++ LH ++ L+ + C ++ YA +F +RNP
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 64 SVLLFNSMIKAYSLNGPSEEP---VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ +++N MI+ S SE P ++ + + + G P+EYTF + K+C + G+
Sbjct: 92 NHVIWNHMIRGLS---SSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +++ G E + ++ +Y G++ + VFD+ S RD + +I G+ KG
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+D+ LF E+ R VVSWN MIS +SGR EA+ F EMR + +T+++VL
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 241 ICARLG-AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA+ G ++ +G W+ S+ E GL + V N L+D Y KCG L+ A N+F++I KNV
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV-NGLIDMYVKCGDLEEASNLFEKIQDKNV 327
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSWN MI G + + L+ +M+ + PN TF+ +L CA+ G ++ + + A
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387
Query: 360 M-TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+ + S+ + + ++D+ + G + A + M+ + + A W +++S HGH
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTK-SLATWNAMISGFAMHGHT 446
Query: 419 ELA 421
+ A
Sbjct: 447 DTA 449
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L E A+ +F ++++ +V+ +N MI Y+ +E + LF + I P++ TF
Sbjct: 309 CGDLEE---ASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTF 365
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRS--GFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
+L AC +G L +G+ VH + ++ + ++ ++++Y CG + ++FD M
Sbjct: 366 LSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCM 425
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+ + + N MI GF G D AL LF
Sbjct: 426 NTKSLATWNAMISGFAMHGHTDT-------------------------------ALGLFS 454
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M + F D+ T V VL C G + +G ++ S + + K+ G ++D + +
Sbjct: 455 RMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYG-CMIDLFGR 513
Query: 281 CGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELG 318
G+ D A + K + K + W +++ + R EL
Sbjct: 514 AGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELA 552
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 272/542 (50%), Gaps = 74/542 (13%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + L QIHA L L S ++ + + +I +A ++F+ + P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I+ YS N ++ + +++ ++ + PD +TF LLKAC G+ L++G+ VH ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 128 RSGFE-----------------RFGSIRI----------------GVVELYTSCGQMDDG 154
R GF+ R GS R +V Y G+ +
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 155 MKVFDEMSHRDV-------------------IVRNLMIHG-------------------- 175
+++F M DV + + IH
Sbjct: 207 LEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G V LF +M+ +++ WN MIS K+G EA+ +FHEM ++ D ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ + CA++G+++ + ++ Y S YR V + +AL+D + KCG ++ AR VF
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++VV W+AMI G +GR + LY M GV PN TF+G+L C H+G+V +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +HY C++D+LGR+G + +AY++I+ M ++P +WG+LLS+C+ H
Sbjct: 446 FFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
HVEL E+A ++L +++P N+G+YV LSN+YA WD +R+ M+E + K G S
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 476 IE 477
+E
Sbjct: 565 VE 566
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 172/532 (32%), Positives = 271/532 (50%), Gaps = 79/532 (14%)
Query: 20 QIHAHFLRHKLHQS----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
++HA L+ + + N +L+ + CG+L + A ++F+ +R+ +++ + +MI+A+
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAK-CGSLTD---ARRVFDGIRDRNIVSWTAMIEAF 172
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ E K + +K G PD+ TF LL A L+VGQ VH EI ++G E
Sbjct: 173 VAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEP 232
Query: 136 SIRIGVVELYTSC-------------------------------GQMDDGMKVFDEMSH- 163
+ +V +Y C GQ+D +++ ++M
Sbjct: 233 RVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQA 292
Query: 164 --------------------------------------RDVIVRNLMIHGFCKKGDVDKG 185
R++ V N +I +CK G + +
Sbjct: 293 EVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEA 352
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF ++ R VV+W M++ + G EA+ LF M+ Q + D+ T + L C+
Sbjct: 353 RKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSP 412
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+ G+ IH +G Y V + +ALV Y KCG +D AR VF ++ +NVV+W AM
Sbjct: 413 AFLQEGKSIHQQLVHAG-YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAM 471
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I+G A +GR +E +EQM +G+ P+K TF VL+ C H GLVE+ R+ F SM +
Sbjct: 472 ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYG 531
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P +EHY C VD+LGR+G + EA ++I +M +P ++WG+LLS+CR H VE E A
Sbjct: 532 IKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAA 591
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ ++ L+P + G YV LSNIYA GR++DAE +R M + +V K PGQS IE
Sbjct: 592 ENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 643
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 183/413 (44%), Gaps = 70/413 (16%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
+L+ ++ D F LL+ C + L G+ VH I++SG + + ++ +Y CG
Sbjct: 88 ILQGTRVYSD--VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG 145
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+ D +VFD +R+R++VSW MI +
Sbjct: 146 SLTDARRVFD-------------------------------GIRDRNIVSWTAMIEAFVA 174
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
++ EA + + M+ + D+ T V++L + +GQ +H +GL +
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELE-PR 233
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
VG +LV Y KCG + A+ +F ++P KNVV+W +I+G A G+ ++ +EL E+M
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARE----------------------LFASMTGL---H 364
V+PNK T+ +L C +E ++ ++ GL
Sbjct: 294 VAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEAR 353
Query: 365 SIVPNLEH-----YGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHG 416
+ +L H + MV + G EA DL R M I+P+ + S L+SC +
Sbjct: 354 KLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPA 413
Query: 417 HVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMRENNV 467
++ + ++L++ ++ Y+ L ++YA+ G DDA + M E NV
Sbjct: 414 FLQEGKSIHQQLVH-AGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNV 465
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
+S L K GR EAL + + M Q + +L CARL +++ G+ +H+ SG+
Sbjct: 68 VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+ + N L+ Y KCG L AR VF I +N+VSW AMI + + YE
Sbjct: 128 -QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF---------------ASMTGLHSIVP 368
M G P+K TFV +L + L++ +++ S+ G+++
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246
Query: 369 NLEHYGCMVDVL---------------GRSGCVREAYDLIRSMS---IRPNAAIWGSLLS 410
++ + D L + G V A +L+ M + PN + S+L
Sbjct: 247 DISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ 306
Query: 411 SCRT 414
C T
Sbjct: 307 GCTT 310
>gi|242094040|ref|XP_002437510.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
gi|241915733|gb|EER88877.1| hypothetical protein SORBIDRAFT_10g028370 [Sorghum bicolor]
Length = 653
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 241/433 (55%), Gaps = 10/433 (2%)
Query: 52 YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK-----NLGIWPDEYTFAPL 106
YA +F+ + P L ++++ L P E ++F+ L+ +L P + F+PL
Sbjct: 95 YAVAVFSSLSPPDPFLAAALLRFAHLTQPPLETFRVFSGLRRAHGRDLPFLP--FAFSPL 152
Query: 107 LKACLGVGDLRVGQCVHG-EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
K+ L H ++ GF++ + ++ Y +CG + KV DEM +D
Sbjct: 153 AKSAAAARSLPAAAGAHAVSLLLGGFDKHRFVENSLIGAYVACGDVGAARKVLDEMVVKD 212
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
VI ++ + + D+ +F + +V+W M++ ++ +AL F +M
Sbjct: 213 VISWTSIVAAYSRSRDMGSAEEVFALCPVKDMVAWTAMVTGYAQNAMPVKALEAFEQMAG 272
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+DE ++ + CA+LGAV WI A+ SGL R VV VG+ LVD Y KCG++D
Sbjct: 273 AGMPIDEVSLTGAISACAQLGAVRRAVWIQEIADRSGLGRNVV-VGSGLVDMYAKCGLID 331
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCC 344
A VF+ + KNV ++++MI GLA +GR + L+ M+ + V PN TF+GVLT C
Sbjct: 332 EACRVFEGMQEKNVYTYSSMIVGLASHGRANDAIALFNDMVRRADVEPNHVTFIGVLTAC 391
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAG+V++ R FA M + I+P+ +HY CMVD+LGR+G V EA DL++SM++ P+ +
Sbjct: 392 SHAGMVKEGRYYFAQMKDRYGILPSADHYTCMVDLLGRAGLVIEALDLVKSMTVEPHGGV 451
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL +CR HG+ ++A+ A + L LEP GNYVLLSN A G WD+ +R MR
Sbjct: 452 WGALLGACRIHGNTKVAKVAAQHLFKLEPEGIGNYVLLSNTLASAGEWDEVSKVRKLMRI 511
Query: 465 NNVKKSPGQSLIE 477
+KK P S E
Sbjct: 512 RGLKKDPAVSSFE 524
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 235/438 (53%), Gaps = 35/438 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
F S CG L + A K+F+ M +V+ + MI G E V LF L G+ PD
Sbjct: 148 FYSKCGFLRD---AWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPD 204
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+ +L+AC +GDL G+ + + G R + +V++YT CG M
Sbjct: 205 GFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSM-------- 256
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
++ ++F M E+ +V W+ MI +G EA+ L
Sbjct: 257 -----------------------EEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIEL 293
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F EMR D +V L CA LGA+++G W V +G +L+DFY
Sbjct: 294 FFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPV-LGTSLIDFYA 352
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG ++ A V+K + K+ V +NA+ISGLA G+ ++ QM G+ PN+ TFVG
Sbjct: 353 KCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVG 412
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C HAGLV+ R F SM+ S+ P +EHYGCMVD+L R+G + EA++LI+ M ++
Sbjct: 413 LLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
N +WGSLL CR H +LAEH +K+LI LEPWNSG+YVLLSNIY+ RWD+AE +R
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIR 532
Query: 460 MWMRENNVKKSPGQSLIE 477
+ E ++K PG S +E
Sbjct: 533 STVNEKGMQKLPGYSWVE 550
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 185/413 (44%), Gaps = 36/413 (8%)
Query: 11 GRNTRTHLTQIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFNQM-RNPSVLLF 68
G H H LR LH N +L+ + S N +Y +F++ N + L+
Sbjct: 13 GLKCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLY 72
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+MI+ V L+A + I PD +TF+ +LKAC + +G +H + +
Sbjct: 73 NTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFK 132
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
+GF+ ++ VV Y+ CG + D KVFD+M +V+N
Sbjct: 133 TGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDM-----VVKN------------------ 169
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
VVSW MI + G+ EA+ LF + + D +V VL CARLG +
Sbjct: 170 --------VVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDL 221
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+ G+WI GL R V V +LVD Y KCG ++ AR VF + K++V W+AMI G
Sbjct: 222 ESGRWIDRCMRECGLSRNVF-VATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQG 280
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A NG +EL+ +M V P+ VG L+ CA G +E + +
Sbjct: 281 YASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELG-NWAKGLMNYEEFLS 339
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
N ++D + G + EA + + M + ++ +++S +G V A
Sbjct: 340 NPVLGTSLIDFYAKCGSMEEALGVYKMMK-EKDRVVFNAVISGLAMYGQVGAA 391
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 261/480 (54%), Gaps = 36/480 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQ 59
E+K + L +T L Q+HA +R Q+ ++ + C + ++ YA +F++
Sbjct: 55 EQKFMFLFKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDR 114
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ N L+N+MI+ + N + + + GI D +TF+ LLK +G + +G
Sbjct: 115 IENADGFLWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLG 174
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H I++ G + SH V VRN +IH + +
Sbjct: 175 KQLHVNILKLGLD-----------------------------SH--VYVRNTLIHMYGRL 203
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
DV+ LF E+ + +V+WN +I G +EAL LF +M E DEAT+V +
Sbjct: 204 KDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTI 263
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C+ LGA+D G+W+HS+ S+ K ++V N+L+D Y KCG ++ AR +F + KN+
Sbjct: 264 SACSALGALDCGRWVHSHVNSND-RGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNI 322
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGV-SPNKATFVGVLTCCAHAGLVEKARELFA 358
V+WN MI GLA +G E + L+ M+A+ V +P+ TF+ VL C + G VE+ R F
Sbjct: 323 VTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFD 382
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
MT +I P L+HYG MVD+LGR+G V EAY LI+SM + NA IW +LL++C+ HG+V
Sbjct: 383 LMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNV 442
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SPGQSLIE 477
EL E ++ + +S +YVLL+N+YA G+W++ R M V+K PG S +E
Sbjct: 443 ELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLE 502
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/381 (40%), Positives = 221/381 (58%), Gaps = 31/381 (8%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PD +T+ PL++AC + LR G+C+H E ++GF ++ +V LY +CG + KV
Sbjct: 802 PDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKV 861
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FDEM +R R++VSWN M++S +GR +E L
Sbjct: 862 FDEMP-----------------------------VRGRNLVSWNSMLNSFAANGRPNEVL 892
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
+F EM F D T+V+VL CA GA+ +G+ +H Y E GL V NAL+D
Sbjct: 893 TVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENS-HVSNALIDL 951
Query: 278 YCKCGILDTARNVFKEIPR-KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG ++ AR +F+E+ + VVSW ++I GLA NG G+ +EL+ M + + P + T
Sbjct: 952 YAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEIT 1011
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
VGVL C+H GLV+ F M + I P +EH GCMVD+LGR+G V EAYD I +M
Sbjct: 1012 MVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITM 1071
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ PNA +W +LL SC H +EL + A + L+ L+P +SG+YVLLSN+YA G W D
Sbjct: 1072 PLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVH 1131
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR M ++ V+K+PG SL+E
Sbjct: 1132 VLRKTMVKDRVRKNPGHSLVE 1152
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 38/294 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQM--RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL 94
L H CG A K+F++M R +++ +NSM+ +++ NG E + +F + +
Sbjct: 845 LVHLYGACGLFES---AHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGV 901
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
PD +T +L AC G L +G+ VH + + G + +++LY CG ++D
Sbjct: 902 DFAPDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDA 961
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
++F+EM GL R+VVSW +I L +G
Sbjct: 962 RRIFEEM-----------------------GL-------GRTVVSWTSLIVGLAANGFGK 991
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNA 273
EAL LF M + E T+V VL C+ G VD G ++ E G+ ++ +G
Sbjct: 992 EALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLG-C 1050
Query: 274 LVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+VD + G ++ A + +P N V W ++ A + + ELG +E+++
Sbjct: 1051 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLV 1104
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 278/556 (50%), Gaps = 81/556 (14%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC--GTLNEIKYATKIFNQ 59
+ IL LL + L ++H + +S + L+ + C +I YA + Q
Sbjct: 4 QNTILSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQ 63
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ NPSV ++NSMI+ + + + L+ + G PD +TF +LKAC + D G
Sbjct: 64 IHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCG 123
Query: 120 QCVHGEIIRSGFERFGSIRIGVVEL-------------------------------YTSC 148
+C+H I++SGFE G++ + Y
Sbjct: 124 KCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKN 183
Query: 149 GQMDDGMKVFDEMSH--------------------RDV---------------------- 166
Q + +KVF++MSH RD+
Sbjct: 184 NQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTS 243
Query: 167 ----IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
I+ ++ + K G + LF +M +R++VSWN MI++ + R EAL LF +
Sbjct: 244 NSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFD 303
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M D+AT ++VL +CA A+ +GQ +H+Y +G+ + S+ AL+D Y K G
Sbjct: 304 MWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDI-SLATALLDMYAKTG 362
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVL 341
L A+ +F + +K+VV W +MI+GLA +G G + +++ M + P+ T++GVL
Sbjct: 363 ELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVL 422
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+H GLVE+A++ F MT ++ +VP EHYGCMVD+L R+G REA L+ +M+++PN
Sbjct: 423 FACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPN 482
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
AIWG+LL+ C+ H +V +A L LEP SG ++LLSNIYA+ GRW++ R
Sbjct: 483 IAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTRKV 542
Query: 462 MRENNVKKSPGQSLIE 477
M+ + K+ G S +E
Sbjct: 543 MKHKRITKTIGHSSVE 558
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 262/484 (54%), Gaps = 9/484 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN----EIKYATKIFN 58
++ L LL + HL Q HA L + L+ ++ C + + YA ++F
Sbjct: 6 KRCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFE 65
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q++NP+V ++N++IKA+ +N + +++F + + PD YT +LKAC D
Sbjct: 66 QIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSF 125
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ +HG + G + ++ +Y G + VFDE+ +V+ ++MI G+ K
Sbjct: 126 GKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAK 185
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
GDVD F E E+ W MIS ++ E+L LF M+ DE+ V++
Sbjct: 186 VGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSI 245
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA LGA++IG WIH + L V + +L+D Y KCG L+ A+ +F + ++
Sbjct: 246 LSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRD 305
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
VV WNAMISG+A +G G+ ++L+ M GV P+ TF+ V T C+++G+ + L
Sbjct: 306 VVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLD 365
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA----IWGSLLSSCRT 414
M +++IVP EHYGC+VD+L R+G EA +IR ++ N + W + LS+C
Sbjct: 366 KMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCN 425
Query: 415 HGHVELAEHAVKELINLEP-WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
HG +LAE A ++++ L+ +SG YVLLSN+YA G+ DA +R M+ K+PG
Sbjct: 426 HGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGC 485
Query: 474 SLIE 477
S +E
Sbjct: 486 SSVE 489
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 257/474 (54%), Gaps = 38/474 (8%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
++++ R ++H H ++ +++ N ++ A +F++M
Sbjct: 60 ELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPER 119
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+V+ + +MI AYS N +++ +K L+ G+ P+ +T++ +L+AC G+ +LR +H
Sbjct: 120 NVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQ---LH 175
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
II++G E DV VR+ +I + K D+D
Sbjct: 176 CGIIKTGLES-------------------------------DVFVRSALIDVYSKWSDLD 204
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
L +F EM R +V WN +I ++ +EAL LF M+ F D+AT+ +VL C
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L +++G+ +H + + + + + NAL+D YCKCG L+ A + F + K+V+SW+
Sbjct: 265 GLALLELGRQVHVHVLK---FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWS 321
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
M++GLA NG +EL+E M G PN T +GVL C+HAGLVEK F SM L
Sbjct: 322 TMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL 381
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ P EHYGC++D+LGR+G + EA LI M P++ W +LL +CR H +V+LA +
Sbjct: 382 FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIY 441
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A K++I LEP ++G Y+LLSNIYA RW+D +R M ++K+PG S IE
Sbjct: 442 AAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIE 495
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+R M D T ++ C+ GAV G+ +H + G Y + V N L+
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKG-YEPKMFVVNTLL 97
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ Y K +L+ A ++F E+P +NVVSW MIS + N + ++ M +GV PN
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMF 156
Query: 336 TFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
T+ VL C GL R+L + TGL S ++ ++DV + + A +
Sbjct: 157 TYSSVLRAC--DGL-PNLRQLHCGIIKTGLES---DVFVRSALIDVYSKWSDLDNALGVF 210
Query: 394 RSMSIRPNAAIWGSLL 409
M R + +W S++
Sbjct: 211 DEMPTR-DLVVWNSII 225
>gi|15240355|ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61800
gi|10176873|dbj|BAB10080.1| unnamed protein product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 256/483 (53%), Gaps = 21/483 (4%)
Query: 14 TRTHLTQIHAHFLRH----KLHQSNLILAHFV--------SVCGTLNEIKYATKIFNQMR 61
T HL Q HA F+ + N + A+ + S + + YAT +F +
Sbjct: 16 TLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFIT 75
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVK-LFALLKNLGIWPDEYTFAPLLKACLGV--GDLRV 118
NPS FN++I+ +L+ PS K F ++ + PD +TF + KAC GDL +
Sbjct: 76 NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ +H + +R G ++ +Y+ +D +++FDE RDV+ N++I G K
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
++ + LF M R +VSWN +IS + EA++LF EM + D +V+
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+ G G+ IH Y + L+ + LVDFY KCG +DTA +F+ K
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+ +WNAMI+GLA +G GEL V+ + +M++ G+ P+ TF+ VL C+H+GLV++AR LF
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI----RPNAAIWGSLLSSCRT 414
M L+ + ++HYGCM D+LGR+G + EA ++I M R W LL CR
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM-RENNVKKSPGQ 473
HG++E+AE A + L P + G Y ++ +YA RW++ +R + R+ VKK+ G
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGF 494
Query: 474 SLI 476
S +
Sbjct: 495 SKV 497
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 239/433 (55%), Gaps = 37/433 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+++ A K+F+ + V+ +N+MI Y N EE ++LF + + PDE T +L
Sbjct: 164 DVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLS 223
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G + +G+ +H + FGS + +
Sbjct: 224 ACAQSGSIELGREIH--TLVDDHHGFGS----------------------------SLKI 253
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N I + K GDV+ LF + + VVSWN +I EAL LF EM
Sbjct: 254 VNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 313
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL----VDFYCKCGIL 284
++ T+++VLP CA LGA+DIG+WIH Y + K V+ G+AL +D Y KCG +
Sbjct: 314 SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKR---LKGVTNGSALRTSLIDMYAKCGDI 370
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ A VF + K++ SWNAMI G A +GR +L+ +M G+ P+ T VG+L+ C
Sbjct: 371 EAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSAC 430
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+H+GL++ R +F S+T ++I P LEHYGCM+D+LG +G +EA ++I M + P+ I
Sbjct: 431 SHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI 490
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W SLL +C+ HG++ELAE ++L+ +EP NSG+YVLLSNIYA GRW+D +R +
Sbjct: 491 WCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNG 550
Query: 465 NNVKKSPGQSLIE 477
+KK PG S IE
Sbjct: 551 KGMKKVPGCSSIE 563
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 230/478 (48%), Gaps = 42/478 (8%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGT---LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
HA ++ LH +N L+ + +C + + YA +F + P++L++N+M++ + +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
P++++ + + G P+ YTF LLK+C G+ +H ++++ G E
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++ +Y G+++D KVFD S RDV+ +I G+ +GDV +F + ER VV
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN MI+ ++ EAL LF EM DE T+V+VL CA+ G++++G+ IH+
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ + + + NA + Y KCG ++ A +F+ + K+VVSWN +I G +
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR------------------------ 354
+ L+++M+ G SPN T + VL CAH G ++ R
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361
Query: 355 ELFA---SMTGLHSIVPNLEH-----YGCMVDVLGRSGCVREAYDL---IRSMSIRPNAA 403
+++A + H + ++ H + M+ G A+DL +R I P+
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELI---NLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
LLS+C G ++L H K + N+ P +Y + ++ G + +AE +
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP-KLEHYGCMIDLLGHAGLFKEAEEI 478
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 257/452 (56%), Gaps = 32/452 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F++M + +V+ +N+MI Y + +E VKLF + + D ++ ++ +
Sbjct: 254 ARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPH----KDSVSWTTIINGYIR 309
Query: 113 VGDLRVGQCVHGEI----------IRSGFERFGSI--------RIGVVEL---------Y 145
VG L + V+ ++ + SG + G I RIG ++ Y
Sbjct: 310 VGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGY 369
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
+ G+MD+ + +F +M ++ + N MI G+ + G +D+ +F+ MRE+++VSWN +I+
Sbjct: 370 SRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIA 429
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
++ +AL+ M + + D++T L CA L A+ +G +H Y SG Y
Sbjct: 430 GFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSG-YM 488
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+ VGNAL+ Y KCG + +A VF++I +++SWN++ISG A NG + +EQM
Sbjct: 489 NDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQM 548
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
++ V P++ TF+G+L+ C+HAGL + ++F M +I P EHY C+VD+LGR G
Sbjct: 549 SSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGR 608
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EA++ +R M ++ NA +WGSLL +CR H ++EL A + L LEP N+ NY+ LSN+
Sbjct: 609 LEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNM 668
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+AE GRW++ E +RM MR K PG S IE
Sbjct: 669 HAEAGRWEEVERVRMLMRGKRAGKQPGCSWIE 700
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 216/450 (48%), Gaps = 43/450 (9%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H++ + +SV I+ A ++F+QM +++ +N+MI Y N EE +LF +
Sbjct: 45 HKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDV 104
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ D +++A ++ G L + + E++ + + ++ Y GQ
Sbjct: 105 MPE----RDNFSWALMITCYTRKGKLEKARELL-ELVPDKLDT--ACWNAMIAGYAKKGQ 157
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+D KVF++M +D++ N M+ G+ + G + L F M ER+VVSWNLM++ KS
Sbjct: 158 FNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKS 217
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G S A +LF ++ + + + V +L A+ G + AE+ L+ ++ S
Sbjct: 218 GDLSSAWQLFEKIPNP----NAVSWVTMLCGLAKYGKM---------AEARELFDRMPSK 264
Query: 271 G----NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
NA++ Y + +D A +FK++P K+ VSW +I+G G+ + ++Y QM
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMP 324
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
K ++ A G++ G +++A ++F S G H +V + M+ RSG +
Sbjct: 325 CKDITAQTALMSGLI----QNGRIDEADQMF-SRIGAHDVVC----WNSMIAGYSRSGRM 375
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSGNYVLLSN 444
EA +L R M I+ N+ W +++S G ++ A + + N+ WNS L++
Sbjct: 376 DEALNLFRQMPIK-NSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNS----LIAG 430
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
D ++L M +E K P QS
Sbjct: 431 FLQNNLYLDALKSLVMMGKEG---KKPDQS 457
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 144/310 (46%), Gaps = 21/310 (6%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G++++ +++F M+H++++ N MI K + LF +M R++VSWN MI+
Sbjct: 31 GKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYL 90
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ EA LF M E D + ++ R G ++ + + +
Sbjct: 91 HNNMVEEASELFDVMP----ERDNFSWALMITCYTRKGKLEKARELLELVPD----KLDT 142
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+ NA++ Y K G + A+ VF+++P K++VS+N+M++G NG+ L ++ +E M +
Sbjct: 143 ACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTER 202
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
V G + +G + A +LF + PN + M+ L + G + E
Sbjct: 203 NVVSWNLMVAGYV----KSGDLSSAWQLFEKIPN-----PNAVSWVTMLCGLAKYGKMAE 253
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +L M + N W +++++ V + AVK + +S ++ + N Y
Sbjct: 254 ARELFDRMPSK-NVVSWNAMIATYVQDLQV---DEAVKLFKKMPHKDSVSWTTIINGYIR 309
Query: 449 GGRWDDAETL 458
G+ D+A +
Sbjct: 310 VGKLDEARQV 319
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD----------- 249
N I LGK G+ EA+R+F M + + ++++VL AR+
Sbjct: 21 NRQIIQLGKLGKVEEAIRIFFNMTHKNL-VTYNSMISVLAKNARIRDARQLFDQMSLRNL 79
Query: 250 ------IGQWIHS--YAESSGLYRKVVSVGN----ALVDFYCKCGILDTARNVFKEIPRK 297
I ++H+ E+S L+ + N ++ Y + G L+ AR + + +P K
Sbjct: 80 VSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDK 139
Query: 298 -NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+ WNAMI+G A G+ +++EQM AK + ++ +L G + A +
Sbjct: 140 LDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDL----VSYNSMLAGYTQNGKMHLALQF 195
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SMT + + NL MV +SG + A+ L + PNA W ++L +G
Sbjct: 196 FESMTERNVVSWNL-----MVAGYVKSGDLSSAWQLFEKIP-NPNAVSWVTMLCGLAKYG 249
Query: 417 HVELAEHAVKELI--NLEPWNS 436
+ A + N+ WN+
Sbjct: 250 KMAEARELFDRMPSKNVVSWNA 271
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 19 TQIHAHFLR----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
Q+H + L+ + L N ++A + CG ++ A ++F + ++ +NS+I
Sbjct: 476 NQLHEYILKSGYMNDLFVGNALIAMYAK-CG---RVQSAEQVFRDIECVDLISWNSLISG 531
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
Y+LNG + + K F + + + PDE TF +L AC G
Sbjct: 532 YALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAG 571
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 246/462 (53%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+HA LR + H +L+ L + CG L+ A ++F +R + +NS+I
Sbjct: 299 HLHARILRME-HSLDLVFGNGLIDMYAKCGCLD---LAKRVFKSLREHDHISWNSLITGV 354
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
G E+ + LF ++ + DE+ +L C G G+ +HG I+SG
Sbjct: 355 VHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSA 414
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ +Y CG D VF M R+ I MI F + GD+ K F M ER
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
++V+WN M+S+ ++G E L+L+ MR + D T + CA L V +G +
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV 534
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
++A GL V SV N++V Y +CG++ A+N F I K+++SWNAM++ A NG G
Sbjct: 535 THATKFGLSLNV-SVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLG 593
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++ +E M+ PN ++V VL+ C+H GLV + + F SMT + I P EH+ C
Sbjct: 594 IKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSC 653
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G + +A DLI M +PNA +W +LL SCR H + LAE A K+L+ L+
Sbjct: 654 MVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEG 713
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
S YVLLSN+Y+E G D+ +R M+ ++ S G S IE
Sbjct: 714 SEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIE 755
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 197/426 (46%), Gaps = 20/426 (4%)
Query: 53 ATKIFNQM--RNPSVLLFNSMIKAYSLNGPSEEPVKLFALL----KNLGIWPDEYTFAPL 106
A K+F++M R + + +MI YS NG + F+L+ + G D ++F +
Sbjct: 93 AEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSV 152
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+KAC +GD R+ +H + + GF I+ VV +Y CG +D VF ++ +
Sbjct: 153 MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSL 212
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
N MI+G+ + K L +F M ER VSWN +IS + G + L +F EM +Q
Sbjct: 213 FCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQ 272
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
F + T +VL CA + G +H+ +V GN L+D Y KCG LD
Sbjct: 273 GFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV-FGNGLIDMYAKCGCLDL 331
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A+ VFK + + +SWN++I+G+ G GE + L+ QM V ++ +L C+
Sbjct: 332 AKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSG 391
Query: 347 AGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
L + +G+ S P ++ + + G +A + R M +R N
Sbjct: 392 PDYASTGELLHGYTIKSGMGSSAPV---GNAIITMYAKCGDTDKADLVFRLMPLR-NTIS 447
Query: 405 WGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
W +++++ G + A + N+ WNS + + Y + G ++ L + M
Sbjct: 448 WTAMITAFSRSGDIGKARGYFDMMPERNIVTWNS-----MLSTYVQNGFSEEGLKLYVSM 502
Query: 463 RENNVK 468
R N V+
Sbjct: 503 RSNGVQ 508
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 144/331 (43%), Gaps = 42/331 (12%)
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+ + +H ++I SG + + ++ +Y++CG D +VF E HR++ N MI
Sbjct: 26 IARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALV 85
Query: 178 KKGDVDKGLYLFREM--RERSVVSWNLMISSLGKSGRDSEALRLFHEM----RDQAFELD 231
+ LF EM R + VSW MIS ++G S + F M D D
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+ +V+ C LG + +H+ G + + N++V Y KCG +D A VF
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETC-IQNSVVGMYVKCGDVDLAETVF 204
Query: 292 KEI-------------------------------PRKNVVSWNAMISGLAFNGRGELGVE 320
+I P ++ VSWN +IS + +G G +
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDV 379
++ +M +G SPN T+ VL+ CA ++ L A + + HS+ +L ++D+
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL--DLVFGNGLIDM 322
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+ GC+ A + +S+ + + W SL++
Sbjct: 323 YAKCGCLDLAKRVFKSLREHDHIS-WNSLIT 352
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 256/486 (52%), Gaps = 15/486 (3%)
Query: 6 LRLLHGRNTRTH-----LTQIHAHFLRHKL-HQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
LRL+ + H + IH L+ L H + +S L +A ++F++
Sbjct: 11 LRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDE 70
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV- 118
M ++ +M +A+ +G + + + +F + G++PD A L AC G G
Sbjct: 71 MPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTAR 130
Query: 119 ---GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
G+ +H ++ SG + ++ +Y G++ +VFD+M R I N M+H
Sbjct: 131 RNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQ 190
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ---AFELDE 232
+ + G VD +F M R VVSWN +++ +GR EAL LF +M A +
Sbjct: 191 YARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNV 250
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ +L CA G ++ G W+H+Y E + + + L+D YCKCG +D A VF+
Sbjct: 251 PTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGY-LDRCLIDMYCKCGSIDNALQVFE 309
Query: 293 EIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ PRK ++ SW +I GLA +GR + +++ M G+ P+ T VGVL CAH GLV+
Sbjct: 310 KAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVD 369
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SM I P +EHYGCM+D+LGR G ++EAY +IR+M + PN IWG+ LS+
Sbjct: 370 EGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSA 429
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
C+ HG++EL + A +EL L+P + V+LS++YA+ W R M VKK+P
Sbjct: 430 CKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTP 489
Query: 472 GQSLIE 477
G S IE
Sbjct: 490 GCSSIE 495
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 257/459 (55%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H+ LR L ++ ++ +E+ A +F++M + +N+M+ YS G
Sbjct: 129 EVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGG 188
Query: 80 PSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
EE +LF +L ++ + P+ T +L+AC DL G VH + S + S+
Sbjct: 189 SYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLW 248
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
V+ LY CG +D ++F+EM +D I MI G+ G V++ + LFRE +
Sbjct: 249 NAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLP 308
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN +IS L ++ R A+ +F M+ + T+ ++LP+ + + G+ IH YA
Sbjct: 309 TWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYA 368
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ Y + + V A++D Y KCG L A+ VF +I +++++W ++IS A +G +
Sbjct: 369 IRN-TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVA 427
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ L+ +M+ G+ P++ TF VL CAH+G +++A ++F + + I P +EHY CMV
Sbjct: 428 LSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVG 487
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
VL R+G + +A + I M + P A +WG+LL+ G VEL ++ L +EP N+GN
Sbjct: 488 VLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGN 547
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+++N+Y++ GRW DA+T+R M+E +KK PG S IE
Sbjct: 548 YVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 195/449 (43%), Gaps = 74/449 (16%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + N + + +S I+ A +F ++ ++ +N++ +Y+L+
Sbjct: 24 QLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHN 83
Query: 80 PSEEPVKLFALLKN---LGIWPDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFG 135
+ +KLF+ L N + PD +T LKA + + + + VH I+R G E
Sbjct: 84 MHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDI 143
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ Y+ C ++ +FD M RD + N M+ G+ + G ++ LFR
Sbjct: 144 FVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFR----- 198
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+M+SS+ E++ A T V+VL CA+ + G +H
Sbjct: 199 ------VMLSSV--------------EVKPNAL-----TAVSVLQACAQSNDLTFGIEVH 233
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV--------------- 300
+ S + + VS+ NA++ Y KCGILD AR +F+E+P K+ +
Sbjct: 234 RFVNESQI-KMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFV 292
Query: 301 ----------------SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+WNA+ISGL N R E V+++ M + G PN T +L
Sbjct: 293 NQAMDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVF 352
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA---YDLIRSMSIRPN 401
+H ++ +E+ ++ N+ ++D + G + A +D I+ S+
Sbjct: 353 SHFSTLKGGKEIHGYAI-RNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSL--- 408
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELIN 430
W S++S+ HG +A E++
Sbjct: 409 -IAWTSIISAYAVHGDANVALSLFYEMLT 436
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 247/442 (55%), Gaps = 39/442 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L HF SVC + A+++F++M V+ + +I Y G +E V LF + +
Sbjct: 75 LVHFYSVCKRFGD---ASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFL---RMDV 128
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ TF +L AC G L VG+ +HG +S F + ++++Y CG + +
Sbjct: 129 EPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQ 188
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFDE++ E+ +VSW +IS L + EA
Sbjct: 189 VFDELA-------------------------------EKDIVSWTSIISGLVQCNCPKEA 217
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF +M+ E D + +VL CARLGA+D G+W+H + + + + + +G A+VD
Sbjct: 218 LELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAI-KWDIQIGTAMVD 276
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG ++ + +F +P KNV++WNA+++GLA +G +EL+E+M+ G+ PN+ T
Sbjct: 277 MYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVT 336
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
F+ +LT C H GLV + R+ F M G +++ P LEHYGCMVD+L R+ + EA +L ++
Sbjct: 337 FLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKA 396
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+ I G+LLS+C+ +G+ EL + + + L+ +SG YVLLSNI+A RWDD
Sbjct: 397 MPMSPDVRIMGALLSACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDV 456
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+R M+E +KK PG ++IE
Sbjct: 457 TRIRRLMKEKGIKKPPGSTVIE 478
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 188/411 (45%), Gaps = 50/411 (12%)
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC---LGVGDLRVGQCVHG 124
FN+++ Y++ + ++ + G PD +TF +LK+C +G+G+ G+ VHG
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGE---GRQVHG 58
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
II+ GF + +V Y+ C + D +VFD
Sbjct: 59 VIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFD------------------------- 93
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
EM R VVSW +IS ++G EA+ LF M E + AT V+VL C R
Sbjct: 94 ------EMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNAATFVSVLVACGR 144
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
G + +G+ IH + S + + V NAL+D Y KCG L A+ VF E+ K++VSW +
Sbjct: 145 KGYLSVGKGIHGLSFKSA-FGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTS 203
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
+ISGL + +EL++ M + G+ P+ VL+ CA G ++ R + +
Sbjct: 204 IISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHID-RK 262
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH----VEL 420
+I +++ MVD+ + GC+ + + M + N W +LL+ HGH +EL
Sbjct: 263 AIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK-NVLTWNALLNGLAMHGHAYKVLEL 321
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
E V+ + + P N ++ + G ++ WM+ P
Sbjct: 322 FEEMVR--VGMRP-NEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPP 369
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 39/300 (13%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
L SN ++ +V CG L A ++F+++ ++ + S+I +E ++LF
Sbjct: 167 LEVSNALMDMYVK-CGCLPG---AKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQ 222
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
+++ GI PD +L AC +G L G+ VH I R + I +V++Y CG
Sbjct: 223 DMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCG 282
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
++ M++F+ M H++V+ N +++G L
Sbjct: 283 CIEMSMQIFNGMPHKNVLTWNALLNG-------------------------------LAM 311
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY--AESSGLYRKV 267
G + L LF EM +E T +A+L C G V+ G+ ++ + L ++
Sbjct: 312 HGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRL 371
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
G +VD C+ +LD A + K +P +V A++S NG EL E+ ++ +
Sbjct: 372 EHYG-CMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEILDRFV 430
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H H R + I V + I+ + +IFN M + +VL +N+++ +++G
Sbjct: 255 VHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGH 314
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+ + ++LF + +G+ P+E TF +L AC G + G+
Sbjct: 315 AYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGR 354
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 259/527 (49%), Gaps = 70/527 (13%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVS-VCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+ + + L Q L + +C AT +F+ + +P N++I+AY+
Sbjct: 23 LNQVLSQLIVSGLSQHPLFATSAIKKLCSHSVTFPRATFLFDHLHHPDAFHCNTIIRAYA 82
Query: 77 LNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE-- 132
P F K L + P+ YTF L+K C +G R G H I++ GF
Sbjct: 83 -RKPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREGLKGHARIVKFGFGSD 141
Query: 133 ---------------RFGSIRI--------------GVVELYTSCGQMDDGMKVFDEMSH 163
R G+ R+ +++ Y G++ KVF+EM
Sbjct: 142 LFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSYNSMIDGYVKNGEIGAARKVFNEMPD 201
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RDV+ N +I G+ GD+D LF + ER VSWN MI + G S A++ F M
Sbjct: 202 RDVLSWNCLIAGYVGVGDLDAANELFETIPERDAVSWNCMIDGCARVGNVSLAVKFFDRM 261
Query: 224 RDQAFEL----------------------------------DEATVVAVLPICARLGAVD 249
+ +EAT+V+VL CA LG +
Sbjct: 262 PAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVEGREAVPNEATLVSVLTACANLGKLS 321
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G W+HS+ S+ + V+ + L+ Y KCG +D A+ VF E+P ++VVSWN+MI G
Sbjct: 322 MGMWVHSFIRSNNIKPDVLLL-TCLLTMYAKCGAMDLAKGVFDEMPVRSVVSWNSMIMGY 380
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+G G+ +EL+ +M G PN ATF+ VL+ C HAG+V + F M ++ I P
Sbjct: 381 GLHGIGDKALELFLEMEKAGQQPNDATFISVLSACTHAGMVMEGWWYFDLMQRVYKIEPK 440
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGCMVD+L R+G V + +LIR + ++ +AIWG+LLS C H EL E K I
Sbjct: 441 VEHYGCMVDLLARAGLVENSEELIRMVPVKAGSAIWGALLSGCSNHLDSELGEIVAKRFI 500
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LEP + G Y+LLSN+YA GRWDD E +R+ ++E ++K SL+
Sbjct: 501 ELEPQDIGPYILLSNMYAAKGRWDDVEHVRLMIKEKGLQKEAASSLV 547
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 269/481 (55%), Gaps = 6/481 (1%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFN 58
I +L LL + L ++HA + + L + +S N +I Y+ ++F+
Sbjct: 13 INGTLLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFS 72
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q+ +P++ +N +I+ YS + + +F + G+ PD T+ L+KA + +
Sbjct: 73 QISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKS 132
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G VH +II++G E I+ ++ +Y SCG + KVF+ M ++++ N M+ G+ K
Sbjct: 133 GVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G++ +F M+ER V SW+ I K+G EA+ +F +MR + +E T+V+V
Sbjct: 193 CGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK- 297
L CA LGA+ G+ +H Y + L +V + +LVD Y KCG ++ A VF+ I +
Sbjct: 253 LSACAHLGALQKGRMMHQYIIDNLLPMTMV-LQTSLVDMYAKCGAIEEALFVFRGISKSQ 311
Query: 298 -NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+V WNAMI GLA +G E ++L+++M G+ ++ T++ +L CAH GLV++A
Sbjct: 312 TDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNF 371
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F S+ + P EHY CMVDVL R+G + AY I + I P A++ G++ S C H
Sbjct: 372 FESLVK-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHR 430
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ +LAE ++LI L+P N G Y+ LSN+YA RWDD++++R M VKKSPG S +
Sbjct: 431 NFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFV 490
Query: 477 E 477
E
Sbjct: 491 E 491
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 266/472 (56%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+N+ +H H + Q + +++ L+ I A K+F++ R ++ ++N++
Sbjct: 91 QNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNAL 150
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLRVGQCVHGEII 127
+A +L G E + L+ + +G+ D +T+ +LKAC+ V L G+ +HG I+
Sbjct: 151 FRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHIL 210
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R GFE I ++++Y G + + +VFD+M V+N
Sbjct: 211 RHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMP-----VKN----------------- 248
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM--RDQAFELDEATVVAVLPICARL 245
VVSW+ MI+ K+G+ EAL LF +M +Q + T+V+VL CA L
Sbjct: 249 ---------VVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAAL 299
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ +H Y GL ++ V +ALV Y +CG L+ VF+ + +++VVSWN++
Sbjct: 300 AALEQGKLMHGYILRRGL-DSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSL 358
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G ++++++MI +G+SP+ +FV VL C+HAGLVE+ + LF SM H
Sbjct: 359 ISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHK 418
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P++EHY CMVD+LGR+ + EA +I M I P +WGSLL SCR H +VELAE A
Sbjct: 419 IFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERAT 478
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L LEP N+GNYVLL++IYAE W++ + ++M + ++K PG+S IE
Sbjct: 479 SRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIE 530
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 48/370 (12%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N +I++ G + +++ + N P ++T+ L+ +C L G +H +I
Sbjct: 51 NPLIQSLCKQGNLNQALQVLSQEPN----PTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
G ++ + ++ +Y+ +D+ KVFD
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFD----------------------------- 137
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC----AR 244
+ R+R++ WN + +L +G E L L+ M D T VL C A
Sbjct: 138 --KTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAF 195
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+ + G+ IH + G + V + L+D Y + G + A VF ++P KNVVSW+A
Sbjct: 196 VSLLLNGREIHGHILRHG-FEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSA 254
Query: 305 MISGLAFNGRGELGVELYEQMIA--KGVSPNKATFVGVLTCCAHAGLVEKARELFASM-- 360
MI+ + NG+ +EL+ +M+ + + PN T V VL CA +E+ + + +
Sbjct: 255 MIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILR 314
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
GL SI+P + +V V R G + + + M R + W SL+SS HG
Sbjct: 315 RGLDSILPVV---SALVTVYARCGNLELGHRVFERMEKR-DVVSWNSLISSYGIHGFGRK 370
Query: 421 AEHAVKELIN 430
A KE+I+
Sbjct: 371 AIQIFKEMID 380
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LL+GR +IH H LRH I+ + + + A+++F+QM +V+
Sbjct: 199 LLNGR-------EIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVS 251
Query: 68 FNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+++MI YS NG E ++LF +L+N + P+ T +L+AC + L G+ +HG
Sbjct: 252 WSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGY 311
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
I+R G + + +V +Y CG ++ G +VF+ M RDV+ N +I
Sbjct: 312 ILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLI------------ 359
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
SS G G +A+++F EM DQ + V+VL C+
Sbjct: 360 -------------------SSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHA 400
Query: 246 GAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
G V+ G+ + S ++ V +VD + LD A + ++
Sbjct: 401 GLVEEGKVLFESMVRGHKIFPSVEHYA-CMVDLLGRANRLDEAAKIIDDM 449
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 250/440 (56%), Gaps = 34/440 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG-PSEEPVKLFALLKNLGIWP 98
+++ L++ A ++F+ + + V+ +NSM+KAY G +E L +++ + P
Sbjct: 158 LITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAP 217
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ T A +L AC G+L +G+ V + +G E I +V +Y CG+M + +VF
Sbjct: 218 NGVTLAVVLTACRDAGNLVLGRWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVF 277
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D + H+DV V+WN MI+ ++G +EA+
Sbjct: 278 DGIRHKDV-------------------------------VAWNAMITGYAQNGMSNEAIA 306
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LFH MR+ D+ T+V VL CA +GA+ +G + +YA GLY V VG ALVD Y
Sbjct: 307 LFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYNNVY-VGTALVDMY 365
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM-IAKGVSPNKATF 337
KCG L+ A +VF ++P KN SWNA+I GLAFNGRG ++ +E M KG+ P+ TF
Sbjct: 366 AKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEKGLQPDDITF 425
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL+ C HAGL+E R+LF S+T + I+P +EHY C+VD+L R+G + EA+D I M
Sbjct: 426 IGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHLEEAWDFIEEMP 485
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ +A + G+LL++CR + E+ E + ++ LEP NS NYV+ S IYA + D++
Sbjct: 486 GKVDAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVVSSKIYATSDKMDESAR 545
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+ MRE V K+PG S +E
Sbjct: 546 MIGLMRERGVNKTPGCSWVE 565
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 158/351 (45%), Gaps = 40/351 (11%)
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLK-NLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P+ +N I+ ++ + P ++L+ + + PD YT LL A + +
Sbjct: 79 PTAFTYNVTIRLFASSRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPALARS 138
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H + + G ++ +Y+ +VFD +SHRDV
Sbjct: 139 AHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDV--------------- 183
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLP 240
VSWN M+ + ++G +E + M + A + T+ VL
Sbjct: 184 ----------------VSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLT 227
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
C G + +G+W+ + S+G+ + +G+ALV Y KCG + AR VF I K+VV
Sbjct: 228 ACRDAGNLVLGRWVEEWVRSAGMEVDSL-IGSALVGMYEKCGEMAEARRVFDGIRHKDVV 286
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FA 358
+WNAMI+G A NG + L+ M G+ P+K T VGVL+ CA G ++ EL +A
Sbjct: 287 AWNAMITGYAQNGMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYA 346
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
GL++ N+ +VD+ + G + +A + M + N A W +L+
Sbjct: 347 MRRGLYN---NVYVGTALVDMYAKCGDLEKATHVFGKMPFK-NEASWNALI 393
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 163/486 (33%), Positives = 256/486 (52%), Gaps = 15/486 (3%)
Query: 6 LRLLHGRNTRTH-----LTQIHAHFLRHKL-HQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
LRL+ + H + IH L+ L H + +S L +A ++F++
Sbjct: 11 LRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDE 70
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV- 118
M ++ +M +A+ +G + + + +F + G++PD A L AC G G
Sbjct: 71 MPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPDNVAVAVALGACHGAGSWTAR 130
Query: 119 ---GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
G+ +H ++ SG + ++ +Y G++ +VFD+M R I N M+H
Sbjct: 131 RNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQ 190
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ---AFELDE 232
+ + G VD +F M R VVSWN +++ +GR EAL LF +M A +
Sbjct: 191 YARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNV 250
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ +L CA G ++ G W+H+Y E + + + L+D YCKCG +D A VF+
Sbjct: 251 PTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGY-LDRCLIDMYCKCGSIDNALQVFE 309
Query: 293 EIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ PRK ++ SW +I GLA +GR + +++ M G+ P+ T VGVL CAH GLV+
Sbjct: 310 KAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVD 369
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SM I P +EHYGCM+D+LGR G ++EAY +IR+M + PN IWG+ LS+
Sbjct: 370 EGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSA 429
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
C+ HG++EL + A +EL L+P + V+LS++YA+ W R M VKK+P
Sbjct: 430 CKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTP 489
Query: 472 GQSLIE 477
G S IE
Sbjct: 490 GCSSIE 495
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 237/414 (57%), Gaps = 2/414 (0%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+V+ + +I YS G + E V F + + GI PDE T +L AC + DL G +H
Sbjct: 201 NVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLH 260
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH-RDVIVRNLMIHGFCKKGDV 182
+ + + ++++Y CG +VFD + R N MI G+CK G V
Sbjct: 261 MLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHV 320
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
D LF +M + V+++N +I+ GR EAL LF +MR D T+V +L
Sbjct: 321 DIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTAS 380
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A LGA+ G+ +H+ E L + V +G AL+D Y KCG ++ A FK++ ++V +W
Sbjct: 381 ASLGALPQGRALHACIEQR-LVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTW 439
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI GLAFNG G+ +E + M G N T++ VLT C+H+ L+++ R F M
Sbjct: 440 SAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRL 499
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
LH+I P +EHYGCM+D+LGRSG + EA DL+++M ++PNA IW S+LS+CR H +V+LA+
Sbjct: 500 LHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQ 559
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+A L+ LEP YV + NIY + +W+DA +R M + VKK+ G S I
Sbjct: 560 NAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSI 613
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 39/395 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKA-YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++YA +F++M S LF++ ++A + + + P+ L+ + + + PD +TF L K
Sbjct: 53 LRYALSLFDRMPC-STFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFK 111
Query: 109 ACL-GVGDLRVGQCVHGEIIRSGFER-FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
C G + +G+ +H R+ I ++ +Y G D + FDE S +DV
Sbjct: 112 CCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDV 171
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ +I G K G +D L R+VV+W +IS ++GR +EA+ F+ M
Sbjct: 172 VAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSD 231
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIH--------------------SYAE--SSGLY 264
DE TV+ +L C +L ++ G +H YA+ +G
Sbjct: 232 GIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRA 291
Query: 265 RKVVSV---------GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
R+V NA++D YCK G +D AR++F ++ +V+++N++I+G GR
Sbjct: 292 REVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRL 351
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG- 374
+ L+ +M G+ + T VG+LT A G + + R L A + +V + G
Sbjct: 352 REALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIE--QRLVERDVYLGT 409
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
++D+ + G V EA + MS+R + W +++
Sbjct: 410 ALLDMYMKCGRVEEAMVAFKQMSVR-DVHTWSAMI 443
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 32/263 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ + A +F+QM + V+ FNS+I Y G E + LF ++ G+ D +T L
Sbjct: 317 VGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGL 376
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L A +G L G+ +H I + ER + ++++Y CG++++ M F +MS RD
Sbjct: 377 LTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRD- 435
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
V +W+ MI L +G AL F M+
Sbjct: 436 ------------------------------VHTWSAMIGGLAFNGMGKAALEHFFWMKCD 465
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
F + T +AVL C+ +D G+ R + ++D + G+LD
Sbjct: 466 GFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDE 525
Query: 287 ARNVFKEIP-RKNVVSWNAMISG 308
A ++ + +P + N V W +++S
Sbjct: 526 AMDLVQTMPMQPNAVIWASILSA 548
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 225/409 (55%), Gaps = 32/409 (7%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
NSMI+ Y + +FAL+ I PD TF +LKA + D VG+ +HG +I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
GF + ++YTS ++H +C + L
Sbjct: 118 MGF---------ICDVYTSTA----------------------LVHLYCTCLSISDASQL 146
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F EM ER+ V+WN +I+ + + +A+ F M + E TVV VL C+ LGA
Sbjct: 147 FDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+ G+WIH + + L R V VG AL+D Y KCG + VF+EI KNV +WN +ISG
Sbjct: 207 NQGKWIHEFIYHNRL-RLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A NG+G+ ++ + +M+ + P++ TF+GVL C H GLV + R F SM + P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+EHYGCMVD+LGR+G + EA +LI+SMSI P+ IW +LL +CR HG+ +L E+ +K L
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
I LEP N NYVLLSNIY+ RW + LR M ++K PG S IE
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIE 434
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H C ++++ A+++F++M + + +N++I Y+ N + + F + G
Sbjct: 130 LVHLYCTCLSISD---ASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGA 186
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P E T +L AC +G G+ +H I + + ++++Y CG + + K
Sbjct: 187 QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF+E+ ++V N++I G+ G D A
Sbjct: 247 VFEEIREKNVYTWNVLISGYAMNGQGDA-------------------------------A 275
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW-IHSYAESSGLYRKVVSVGNALV 275
L+ F M + F+ DE T + VL C G V G+W S + GL ++ G +V
Sbjct: 276 LQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYG-CMV 334
Query: 276 DFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
D + G+L+ A + + + + + W A++ +G +LG + +++I + PN
Sbjct: 335 DLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPN 391
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 234/425 (55%), Gaps = 7/425 (1%)
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGD 115
NQ + + + + S I + NG E K F+ + G+ P+ TF LL C G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G +HG + G +R + +G ++ +Y+ G+ VFD M ++ + N MI
Sbjct: 89 EALGDLLHGYACKLGLDR-NHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G VD +F +M ER ++SW MI+ K G EAL F EM+ + D
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ G W+H Y S ++ V V N+L+D YC+CG ++ AR VF
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQD-FKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M KG P+ TF G LT C+H GLVE+
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F M + I P +EHYGC+VD+ R+G + +A L++SM ++PN + GSLL++C
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
HG ++ LAE +K L +L + NYV+LSN+YA G+W+ A +R M+ +KK PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 473 QSLIE 477
S IE
Sbjct: 447 FSSIE 451
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 32/316 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F+ + +++LY CG ++ +VF M R V+
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E+ F
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEK-------------------------------GF 303
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D T L C+ +G V+ G + + LVD Y + G L+ A
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+ + +P K N V ++++ + +G + E + + + + +V + A
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAAD 423
Query: 348 GLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 424 GKWEGASKMRRKMKGL 439
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 225/409 (55%), Gaps = 32/409 (7%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
NSMI+ Y + +FAL+ I PD TF +LKA + D VG+ +HG +I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
GF + ++YTS ++H +C + L
Sbjct: 118 MGF---------ICDVYTSTA----------------------LVHLYCTCLSISDASQL 146
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F EM ER+ V+WN +I+ + + +A+ F M + E TVV VL C+ LGA
Sbjct: 147 FDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAF 206
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
+ G+WIH + + L R V VG AL+D Y KCG + VF+EI KNV +WN +ISG
Sbjct: 207 NQGKWIHEFIYHNRL-RLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISG 265
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A NG+G+ ++ + +M+ + P++ TF+GVL C H GLV + R F SM + P
Sbjct: 266 YAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQP 325
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+EHYGCMVD+LGR+G + EA +LI+SMSI P+ IW +LL +CR HG+ +L E+ +K L
Sbjct: 326 RIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRL 385
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
I LEP N NYVLLSNIY+ RW + LR M ++K PG S IE
Sbjct: 386 IELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIE 434
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H C ++++ A+++F++M + + +N++I Y+ N + + F + G
Sbjct: 130 LVHLYCTCLSISD---ASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGA 186
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P E T +L AC +G G+ +H I + + ++++Y CG + + K
Sbjct: 187 QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF+E+ ++V N++I G+ G D A
Sbjct: 247 VFEEIREKNVYTWNVLISGYAMNGQGDA-------------------------------A 275
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW-IHSYAESSGLYRKVVSVGNALV 275
L+ F M + F+ DE T + VL C G V G+W S + GL ++ G +V
Sbjct: 276 LQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYG-CMV 334
Query: 276 DFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
D + G+L+ A + + + + + W A++ +G +LG + +++I + PN
Sbjct: 335 DLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPN 391
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 238/429 (55%), Gaps = 40/429 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A K+F +M +V+L+ SMI Y LN + F L +P
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDL-------------SP---- 86
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
ER + ++ Y G M + +FD+M RDV+
Sbjct: 87 ----------------------ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSW 124
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N ++ G+ GD++ +F +M ER+V SWN +I ++GR SE L F M D+
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 230 L-DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ ++AT+ VL CA+LGA D G+W+H Y E+ G + V+V NAL+D Y KCG ++ A
Sbjct: 185 VPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAM 244
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VFK I R++++SWN MI+GLA +G G + L+ +M G+SP+K TFVGVL C H G
Sbjct: 245 EVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVE F SM SI+P +EH GC+VD+L R+G + +A + I M ++ +A IW +L
Sbjct: 305 LVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATL 364
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L + + + V++ E A++ELI LEP N N+V+LSNIY + GR+DDA L++ MR+ K
Sbjct: 365 LGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFK 424
Query: 469 KSPGQSLIE 477
K G S IE
Sbjct: 425 KEAGVSWIE 433
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 41/322 (12%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTF 103
+ +++ ++F+ M +V +N +IK Y+ NG E + F + + G + P++ T
Sbjct: 132 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATM 191
Query: 104 APLLKACLGVGDLRVGQCVH--GEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDE 160
+L AC +G G+ VH GE + G+ + +++ ++++Y CG ++ M+VF
Sbjct: 192 TLVLSACAKLGAFDFGKWVHKYGETL--GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ RD+I N MI+G G +EAL LF
Sbjct: 250 IKRRDLISWNTMINGLAAHG-------------------------------HGTEALNLF 278
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYC 279
HEM++ D+ T V VL C +G V+ G + +S + ++ G +VD
Sbjct: 279 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG-CVVDLLS 337
Query: 280 KCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
+ G L A ++P K + V W ++ + ++G E++I K N A FV
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI-KLEPRNPANFV 396
Query: 339 GVLTCCAHAGLVEKARELFASM 360
+ AG + A L +M
Sbjct: 397 MLSNIYGDAGRFDDAARLKVAM 418
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ + G I+ A ++F ++ ++ +N+MI + +G E + LF +KN GI PD
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDG 154
+ TF +L AC +G + G + I E G VV+L + G +
Sbjct: 290 KVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC----VVDLLSRAGFLTQA 345
Query: 155 MKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFRE---MRERSVVSWNLMISSLGKS 210
++ ++M + D ++ ++ VD G E + R+ ++ ++ + G +
Sbjct: 346 VEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDA 405
Query: 211 GRDSEALRLFHEMRDQAFE 229
GR +A RL MRD F+
Sbjct: 406 GRFDDAARLKVAMRDTGFK 424
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 262/484 (54%), Gaps = 41/484 (8%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E+ ++ L + +T HL QIHA + + ++ + C + YA +F+++
Sbjct: 12 EQTLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIP 71
Query: 62 NPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
P L+N+MI+ + + S + F ++ L PD +TF+ +LK + + +G+
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQ-LAHRPDNFTFSFILKIIARLRFVNLGK 130
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H + + GFE VRN +IH +
Sbjct: 131 QLHCSLFKFGFEN-------------------------------HTYVRNSLIHMYGMLK 159
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-----FELDEATV 235
D++ LF EM + ++VSWN +I G+ +EA+ LF +M Q + D AT+
Sbjct: 160 DIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATL 219
Query: 236 VAVLPICARLGAVDIGQWIHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
V L C +G++D G+ +HS+ + + + +SV NALVD Y KCG ++ A F +
Sbjct: 220 VVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNM 279
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS-PNKATFVGVLTCCAHAGLVEKA 353
RKNVVSWN MI G A +G GE + L+ +M+ + V P++ TF+ VL C+H GLV++
Sbjct: 280 KRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEG 339
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
R F M ++I P ++HYGCMVD+LGR+G EAY+LI+SM + NA IW +LL++CR
Sbjct: 340 RRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACR 399
Query: 414 THGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SPG 472
+G+VEL E K L+ LEP +S +YVLL+N+YA G+W++ R M+E V+K PG
Sbjct: 400 NYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPG 459
Query: 473 QSLI 476
S I
Sbjct: 460 NSFI 463
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 221/363 (60%), Gaps = 9/363 (2%)
Query: 121 CVHGEIIRSGFERFGS----IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
C H +I+ G F S + +V Y + + KVFDE++ RD V N ++ +
Sbjct: 106 CSHSLLIKLG--HFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAY 163
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATV 235
K G VD LF EM +R+VVSW M+S ++GR EA+ F EM ++A + +E TV
Sbjct: 164 AKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTV 223
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+VLP CA +GA+++G+ + YA GL R V V NAL++ Y KCG + A VF+ I
Sbjct: 224 SSVLPACAAVGAMELGRKVEEYARGKGLLRNVY-VANALLEMYSKCGSIRQAWQVFQGIG 282
Query: 296 RK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
R+ ++ SWN+MI A +G + L+ ++ GV P+ TFVGV+ C H GLV + +
Sbjct: 283 RQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGK 342
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F SM S+ P +EHYGCMVD+LGR+G + E+Y LI SM + P+A IWG+LL +C
Sbjct: 343 LFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSF 402
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG+VELAE A+ +LI+LEP N+ N V+LSNIYA G+WD + ++E + KKS G S
Sbjct: 403 HGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYS 462
Query: 475 LIE 477
IE
Sbjct: 463 FIE 465
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 243/415 (58%), Gaps = 40/415 (9%)
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLKACLGVGDLRVGQCVHGE 125
++N+MI+ YS + E + L+ + GI P + +TF LL +C + L G VH
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
II+ GFE D+ VRN +IH + G+++
Sbjct: 61 IIKHGFES-------------------------------DLFVRNALIHLYSVFGNLNLA 89
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF E R +VS+N MI + + AL LF EM++ DE T+VAVL CARL
Sbjct: 90 RTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS----DEVTLVAVLSACARL 145
Query: 246 GAVDIGQWI-HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSW 302
GA D+G+ + H Y E+ G++ + + A++D Y KCG +D+A +F+ + + K +
Sbjct: 146 GAFDLGKRLYHQYIEN-GVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVF 204
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N+MI+GLA +G GE + ++ ++I+ G+ P++ TFVGVL C H+GL+E+ ++LF SM
Sbjct: 205 NSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFN 264
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EHYGCMVD+LGR GC+ EAYDL++ M N+ IW +LLS+CRTHG+V++ E
Sbjct: 265 AYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGE 324
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++L+ +E + YVLLSNI A+ +W++A +R M ++ ++K PG S IE
Sbjct: 325 IAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 379
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 44/343 (12%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++H+H ++H + L H SV G LN A +F++ ++ +N+MIK Y+
Sbjct: 56 EVHSHIIKHGFESDLFVRNALIHLYSVFGNLN---LARTLFDESLVRDLVSYNTMIKGYA 112
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFG 135
E + LF ++N DE T +L AC +G +G+ ++ + I +G F +
Sbjct: 113 EVNQPESALCLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNT 168
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ V+++Y CG +D +++F + M GF
Sbjct: 169 ILTAAVMDMYAKCGSIDSALEIFRRVGKN-------MKTGFV------------------ 203
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI- 254
+N MI+ L + G A+ +F E+ + DE T V VL C G ++ G+ +
Sbjct: 204 ----FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLF 259
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNG 313
S + G+ ++ G +VD + G L+ A ++ +++P N V W A++S +G
Sbjct: 260 ESMFNAYGIKPQMEHYG-CMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 318
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++G E+ Q + + + + A +V + A A E+AR++
Sbjct: 319 NVKIG-EIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQV 360
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 257/472 (54%), Gaps = 34/472 (7%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLI--LAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+ N+ L QI A+ ++ + + + L +F + T + + YA +F M P +
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
++FNSM + YS E LF + GI PD YTF LLKAC L G+ +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++ G + + ++ +YT C +D VFD +
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV----------------------- 191
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
E VV +N MI+ + R +EAL LF EM+ + + +E T+++VL CA L
Sbjct: 192 --------EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
G++D+G+WIH YA+ + K V V AL+D + KCG LD A ++F+++ K+ +W+AM
Sbjct: 244 GSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM 302
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I A +G+ E + ++E+M ++ V P++ TF+G+L C+H G VE+ R+ F+ M
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
IVP+++HYG MVD+L R+G + +AY+ I + I P +W LL++C +H +++LAE
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVS 422
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + L+ + G+YV+LSN+YA +W+ ++LR M++ K PG S IE
Sbjct: 423 ERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 221/363 (60%), Gaps = 9/363 (2%)
Query: 121 CVHGEIIRSGFERFGS----IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
C H +I+ G F S + +V Y + + KVFDE++ RD V N ++ +
Sbjct: 106 CSHSLLIKLG--HFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAY 163
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATV 235
K G VD LF EM +R+VVSW M+S ++GR EA+ F EM ++A + +E TV
Sbjct: 164 AKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTV 223
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+VLP CA +GA+++G+ + YA GL R V V NAL++ Y KCG + A VF+ I
Sbjct: 224 SSVLPACAAVGAMELGRKVEEYARGKGLLRNVY-VANALLEMYSKCGSIRQAWQVFQGIG 282
Query: 296 RK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
R+ ++ SWN+MI A +G + L+ ++ GV P+ TFVGV+ C H GLV + +
Sbjct: 283 RQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGK 342
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F SM S+ P +EHYGCMVD+LGR+G + E+Y LI SM + P+A IWG+LL +C
Sbjct: 343 LFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSF 402
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG+VELAE A+ +LI+LEP N+ N V+LSNIYA G+WD + ++E + KKS G S
Sbjct: 403 HGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYS 462
Query: 475 LIE 477
IE
Sbjct: 463 FIE 465
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 237/435 (54%), Gaps = 7/435 (1%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
N + + NQ + +++ + S I S + E + F+ ++ GI P+ TF LL
Sbjct: 16 NNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLL 75
Query: 108 KAC--LGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSH 163
AC G + +HG + G +R + +G ++ +Y+ G + VFD M
Sbjct: 76 SACGNFPSGSEALSDLLHGYACKLGLDR-SHVMVGTAILGMYSKRGHVRKARLVFDYMED 134
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
++ + N MI G+ + G VD + +F EM ER ++SW MI+ K G EAL F EM
Sbjct: 135 KNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREM 194
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ D ++A L C LGA+ G W H Y S +R V V N+L+D YC+CG
Sbjct: 195 QISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQD-FRNNVRVSNSLIDLYCRCGC 253
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ AR VF + ++ VVSWN++I G A NG + + +M +G P+ TF G LT
Sbjct: 254 VEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTA 313
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H GLVE+ + F M + I P +EH+GC+VD+ R+G + +A ++ SM ++PN
Sbjct: 314 CSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEV 373
Query: 404 IWGSLLSSCRTHG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
+ GSLL++CR HG H LAE +K + +L+ NYV+LSN+YA G+W+ A +R M
Sbjct: 374 VIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKM 433
Query: 463 RENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 434 KGLGLKKQPGYSSIE 448
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+K +V+ + + ++VSW I+ L + R +EA R F +MR E + T ++
Sbjct: 14 RKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFIS 73
Query: 238 VLPICARL--GAVDIGQWIHSYAESSGLYRKVVSVG------------------------ 271
+L C G+ + +H YA GL R V VG
Sbjct: 74 LLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYME 133
Query: 272 -------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
N ++D Y + G +D A VF E+P ++++SW AMI+G G E + + +
Sbjct: 134 DKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFRE 193
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDVLGRS 383
M GV+P+ + L C + G + L+A + N+ ++D+ R
Sbjct: 194 MQISGVNPDYVAIIAALAACTNLGALSFG--LWAHRYVVSQDFRNNVRVSNSLIDLYCRC 251
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
GCV A + +M R + W S++ +G+
Sbjct: 252 GCVEFARQVFDTMEKRTVVS-WNSVIVGFAANGN 284
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 254/434 (58%), Gaps = 19/434 (4%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILA---HFVSVCGTLNEIKYATKIFNQMRNPSVLLFN 69
N+ + L QIHAH L LH ++ILA F +V + ++ YA ++F+Q+ +P+ +N
Sbjct: 6 NSMSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPS-GDLAYAQRLFDQLPHPNTFFYN 64
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG---------Q 120
++I+ Y+ + + L ++ G+ PDE+TF L+KA +RV +
Sbjct: 65 TLIRGYAKSSIPSYSLHLVNQMRQNGVDPDEFTFNFLIKA---RSRVRVNINRNLPLVVE 121
Query: 121 C--VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
C +HG +++ GF +R ++ LY + G +VFDE DV+ + ++ +
Sbjct: 122 CDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWSGLVLAHVR 181
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G++++ ++F +M ER VVSW M+S+ ++ EAL L+ M D+ DE T+V+V
Sbjct: 182 AGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVTLVSV 241
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+ C LG + +G +HSY + +G +R +VS+ NAL+D Y KCG +D A VF + RK+
Sbjct: 242 ISACTNLGDLQMGYSVHSYIDENG-FRWMVSLCNALIDMYAKCGCMDRAWQVFNSMSRKS 300
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+V+WN+MIS A N E L+ +M GV+P+ TF+ VLT AH GLV++ LF
Sbjct: 301 LVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVDEGYRLFE 360
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM H I +EHYGC+V++LG++G + EA++LI SM + N +WG LL++CR HG V
Sbjct: 361 SMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVLLAACRKHGDV 420
Query: 419 ELAEHAVKELINLE 432
+ E VK+L+ L+
Sbjct: 421 YMGERVVKKLLELK 434
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/439 (32%), Positives = 253/439 (57%), Gaps = 15/439 (3%)
Query: 53 ATKIFNQMR----NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
A+++F +M P+ + + S++ +++ G +E ++LF +++ GI A +L
Sbjct: 217 ASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLS 276
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C + ++ G+ +HG +++ G+E + ++ ++ Y M D KVF E+ +++++
Sbjct: 277 VCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVS 336
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRER----------SVVSWNLMISSLGKSGRDSEALR 218
N +I + + G D+ F M + +V+SW+ +IS GR ++L
Sbjct: 337 WNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLE 396
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LF +M+ + T+ +VL +CA L A+++G+ +H YA + + ++ VGN L++ Y
Sbjct: 397 LFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNIL-VGNGLINMY 455
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG VF I ++++SWN++I G +G GE + + +MI + P+ TFV
Sbjct: 456 MKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFV 515
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
+L+ C+HAGLV R LF M I PN+EHY CMVD+LGR+G ++EA D++R+M I
Sbjct: 516 AILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNMPI 575
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
PN +WG+LL+SCR + +++ E +++ L+ +G+++LLSNIYA GRWDD+ +
Sbjct: 576 EPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSARV 635
Query: 459 RMWMRENNVKKSPGQSLIE 477
R+ R +KK PGQS IE
Sbjct: 636 RVSARTKGLKKIPGQSWIE 654
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 213/478 (44%), Gaps = 61/478 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV---LLFNSMIKAYS 76
Q+H+ + H+ + A ++V + +A K+F+ + S+ LL+NS+I+A
Sbjct: 49 QLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANV 108
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+G + ++L+ ++ LG PD +T +++AC +G + + VH ++ GF
Sbjct: 109 SHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLH 168
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR--- 193
+ +V +Y G+M+D ++FD M R ++ N M+ G+ D +F+ M
Sbjct: 169 VVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEG 228
Query: 194 -ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ + V+W ++SS + G E L LF MR + E+ + VL +CA + VD G+
Sbjct: 229 LQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGK 288
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM------- 305
IH Y G Y + V NAL+ Y K + A VF EI KN+VSWNA+
Sbjct: 289 EIHGYVVKGG-YEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAES 347
Query: 306 ----------------------------------ISGLAFNGRGELGVELYEQMIAKGVS 331
ISG A+ GRGE +EL+ QM V
Sbjct: 348 GLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVM 407
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFA----SMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
N T VL+ CA + REL +M + +V N ++++ + G +
Sbjct: 408 ANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGN-----GLINMYMKCGDFK 462
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLS 443
E + + ++ R + W SL+ HG E A E+I ++P N +LS
Sbjct: 463 EGHLVFDNIEGR-DLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILS 519
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 53/108 (49%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H + +R+ + + L+ +++ + K +F+ + ++ +NS+I Y ++G
Sbjct: 431 ELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHG 490
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
E ++ F + + PD TF +L AC G + G+ + +++
Sbjct: 491 LGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMV 538
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 254/437 (58%), Gaps = 13/437 (2%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLL 107
+ A +F+QM +P ++ +NS+I Y G ++ F+ +LK+ + PD++T +L
Sbjct: 226 QFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVL 285
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD--EMSHRD 165
AC L++G+ +H I+R+ + G++ ++ +Y G ++ ++ + +
Sbjct: 286 SACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLN 345
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
VI ++ G+ K GD+D +F ++ R VV+W MI ++G S+AL LF M
Sbjct: 346 VIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIR 405
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYA----ESSGLYRKVVSVGNALVDFYCKC 281
+ + + T+ AVL + + L ++D G+ +H+ A E S VSVGNAL+ Y +
Sbjct: 406 EGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSS-----VSVGNALITMYSRS 460
Query: 282 GILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
G + AR +F I ++ ++W +MI LA +G G +EL+E+M+ + P+ T+VGV
Sbjct: 461 GSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGV 520
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L+ C H GLVE+ + F M +H+I P HY CM+D+LGR+G + EAY+ IR+M I P
Sbjct: 521 LSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEP 580
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
+ WGSLLSSCR H +V+LA+ A ++L+ ++P NSG Y+ L+N + G+W+DA +R
Sbjct: 581 DVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRK 640
Query: 461 WMRENNVKKSPGQSLIE 477
M++ VKK G S ++
Sbjct: 641 SMKDKAVKKEQGFSWVQ 657
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 191/418 (45%), Gaps = 40/418 (9%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+++ P + + +MI Y+ G + V F + + GI P ++TF +L +C
Sbjct: 98 ARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAA 157
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
L VG+ VH +++ G + ++ +Y CG VFD M +D N M
Sbjct: 158 AQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTM 217
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
I + D L LF +M + +VSWN +I+ G D AL F M + + + D
Sbjct: 218 ISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPD 277
Query: 232 EATVVAVLPICARLGAVDIGQWIHS--------------------YAESSGL---YRKVV 268
+ T+ +VL CA ++ +G+ IH+ YA+S + +R V
Sbjct: 278 KFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVE 337
Query: 269 SVG---------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G +L+D Y K G +D AR +F + ++VV+W AMI G A NG +
Sbjct: 338 ITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDAL 397
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+ MI +G PN T VL+ + ++ ++L A L V ++ ++ +
Sbjct: 398 VLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEE-VSSVSVGNALITM 456
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HVELAEHAVKELINLEP 433
RSG +++A + + + W S++ S HG +EL E ++ INL+P
Sbjct: 457 YSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR--INLKP 512
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 166/371 (44%), Gaps = 20/371 (5%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKVFDEMSHR 164
LL++ + D +G+C+H II+ G G ++ LY G D ++FDEM +
Sbjct: 18 LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
N ++ K G++D +F E+ + VSW MI G A+ F M
Sbjct: 78 TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ T VL CA A+D+G+ +HS+ G VV V N+L++ Y KCG
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLG-QSGVVPVANSLLNMYAKCGDS 196
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A+ VF + K+ +WN MIS + +L + L++QM P+ ++ ++T
Sbjct: 197 VMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNSIITGY 252
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV-REAYDL---IRSMSIRP 400
H G +A E F+ M S+ P+ G ++ S C RE+ L I + +R
Sbjct: 253 CHQGYDIRALETFSFMLKSSSLKPDKFTLGSVL-----SACANRESLKLGKQIHAHIVRA 307
Query: 401 NAAIWG----SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ I G +L+S G VE+A H + E+ N + L + Y + G D A
Sbjct: 308 DVDIAGAVGNALISMYAKSGAVEVA-HRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPAR 366
Query: 457 TLRMWMRENNV 467
+ ++ +V
Sbjct: 367 AIFDSLKHRDV 377
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 159/379 (41%), Gaps = 73/379 (19%)
Query: 20 QIHAHFLRHKLHQSNLI---------------LAH-FVSVCGT----------------- 46
QIHAH +R + + + +AH V + GT
Sbjct: 299 QIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFK 358
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ +I A IF+ +++ V+ + +MI Y+ NG + + LF L+ G P+ YT A +
Sbjct: 359 IGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAV 418
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEM-SH 163
L + L G+ +H IR E S+ +G ++ +Y+ G + D K+F+ + S+
Sbjct: 419 LSVISSLASLDHGKQLHAVAIR--LEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSY 476
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD + +W MI SL + G +EA+ LF +M
Sbjct: 477 RDTL-------------------------------TWTSMILSLAQHGLGNEAIELFEKM 505
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ D T V VL C +G V+ G+ + ++ S ++D + G+
Sbjct: 506 LRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGL 565
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA-TFVGVL 341
L+ A N + +P +VV+W +++S + +L E+++ + PN + ++ +
Sbjct: 566 LEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLL--IDPNNSGAYLALA 623
Query: 342 TCCAHAGLVEKARELFASM 360
+ G E A ++ SM
Sbjct: 624 NTLSACGKWEDAAKVRKSM 642
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNP 63
+L ++ + H Q+HA +R + S + +++ IK A KIFN +
Sbjct: 418 VLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYR 477
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
L + SMI + + +G E ++LF + + + PD T+ +L AC VG + G+
Sbjct: 478 DTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK 534
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 251/448 (56%), Gaps = 38/448 (8%)
Query: 31 HQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
HQ + L + +++ N + A ++F+QM +V+ + +MI AYS ++ ++L
Sbjct: 44 HQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 103
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
L+ G+ P+ YT++ +L+AC G+ D+R+ +H II+ G E +R +++++ G
Sbjct: 104 LMLRDGVRPNVYTYSSVLRACNGMSDVRM---LHCGIIKEGLESDVYVRSALIDVFAKLG 160
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+ +D + VFDEM D IV N +I GF + D L LF+ M+ ++
Sbjct: 161 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA---------- 210
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
++AT+ +VL C L +++G H + Y + +
Sbjct: 211 ---------------------EQATLTSVLRACTGLALLELGMQAHVHIVK---YDQDLI 246
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
+ NALVD YCKCG L+ AR VF ++ ++V++W+ MISGLA NG + ++L+E M + G
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSG 306
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
PN T VGVL C+HAGL+E F SM L+ I P EHYGCM+D+LG++G + +A
Sbjct: 307 TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDA 366
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
L+ M P+A W +LL +CR ++ LAE+A K++I L+P ++G Y +LSNIYA
Sbjct: 367 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANS 426
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
+WD E +R MR+ +KK PG S IE
Sbjct: 427 QKWDSVEEIRKRMRDIGIKKEPGCSWIE 454
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 147/337 (43%), Gaps = 38/337 (11%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+L N + + +H ++ L + + + V L E + A +F++M ++
Sbjct: 120 VLRACNGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I ++ N S+ ++LF +K G ++ T +L+AC G+ L +G H I+
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 239
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ +++ + +V++Y CG ++D +VF++M RDVI + MI G
Sbjct: 240 K--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG------------ 285
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
L ++G EAL+LF M+ + + T+V VL C+ G
Sbjct: 286 -------------------LAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGL 326
Query: 248 VDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAM 305
++ G + S + G+ G ++D K G LD A + E+ + V+W +
Sbjct: 327 LEDGWYYFRSMKKLYGINPGREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 385
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ L +++IA + P A VL+
Sbjct: 386 LGACRVQRNMVLAEYAAKKVIA--LDPEDAGTYTVLS 420
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D AT ++ C AV G I + +G ++ ++ + N L++ Y K +L+ A +
Sbjct: 12 DSATYSELIKCCLSHRAVHEGNLICRHLYFNG-HQPMMFLVNVLINMYVKFNLLNDAHQL 70
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC------ 344
F ++P++NV+SW MIS + + +EL M+ GV PN T+ VL C
Sbjct: 71 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV 130
Query: 345 --AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
H G++++ GL S ++ ++DV + G +A + M + +A
Sbjct: 131 RMLHCGIIKE---------GLES---DVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDA 177
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKEL 428
+W S++ + ++A K +
Sbjct: 178 IVWNSIIGGFAQNSRSDVALELFKRM 203
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 248/462 (53%), Gaps = 39/462 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q +AH ++ L + VS + + ++F + V+ + ++I NG
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNG 183
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E ++ F +++ G+ DE T +L A + D+ G+ VHG + SG + +
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESG-RVIWDVYV 242
Query: 140 G--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G +V++Y+ CG DD +K +F EM R++
Sbjct: 243 GSALVDMYSKCGYCDDAVK-------------------------------VFNEMPTRNL 271
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSW +I+ + R EAL++F EM + E +++TV + L CA+LG++D G+W+H Y
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 258 AESS--GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ S GL K+ G ALVD Y KCG +D A VF+++P K+V W AMI+GLA G
Sbjct: 332 VDRSKLGLNSKL---GTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDA 388
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ L+ QMI V PN TF+GVL+ CAH GLV++ ELF M + + PN++HYGC
Sbjct: 389 LSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGC 448
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G + EA I SM + P +WG+L S C H EL EH LI L+P +
Sbjct: 449 MVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHH 508
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SG Y+LL+N+Y+ +W+ A +R M+ V KSPG S IE
Sbjct: 509 SGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIE 550
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 251/459 (54%), Gaps = 3/459 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA L+ L A VS + A +F++ + +++S++ A S +
Sbjct: 1 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSAS 60
Query: 81 SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + + +L + PD + + + + R+G+ +H + S + ++
Sbjct: 61 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKS 120
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V++Y CG DDG KVFD MS ++ +V ++ G+ G ++ L LFR M R++ +
Sbjct: 121 SLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFA 180
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGAVDIGQWIHSYA 258
W +IS L +G A+ LF EMR +D+A V++ V+ A L A +G+ +H A
Sbjct: 181 WTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSA 240
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G ++ VGNAL+D Y KC + +AR VF+ I ++V+SW M+ G A +GR E
Sbjct: 241 MRLGFLSNMI-VGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEA 299
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ LY++M+ G PN+ TFVG++ C+HAGLV+K R+LF SM + I P L+HY C +D
Sbjct: 300 LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLD 359
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L RSG + EA +L+ +M P+ A WG+LLS+C + E+ +L+ L P +S
Sbjct: 360 LLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSST 419
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA G+WD +R M ++K PG S IE
Sbjct: 420 YILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIE 458
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 72/344 (20%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+HAHF+ + +++ + V + CG+ ++ K+F+ M + +++ +++ Y+
Sbjct: 102 QLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYA 158
Query: 77 LNGPSEEPVKLFALL--KNLGIWP------------------------------DEYTFA 104
NG SEE ++LF + +NL W D + +
Sbjct: 159 SNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLS 218
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
++ A + +G+ +HG +R GF + ++++Y+ C + +VF+ ++ R
Sbjct: 219 IVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFR 278
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DVI M+ G + GR EAL L+ M
Sbjct: 279 DVISWTTMVVGEAQH-------------------------------GRAEEALALYDRMV 307
Query: 225 DQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ +E T V ++ C+ G V G Q S G+ ++ +D + G
Sbjct: 308 LAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY-TCYLDLLSRSGH 366
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
L A + +P + +W A++S E+ + + ++++
Sbjct: 367 LLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL 410
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 258/458 (56%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA F + + + V + N + A +F+++ ++ L+N +I+ Y+ NG
Sbjct: 68 QLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNG 127
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
P + + L+ + + G+ PD +T +LKAC + + G+ +H +I+SG+ER +
Sbjct: 128 PHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGA 187
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG + D +VFD++ RD ++
Sbjct: 188 ALIDMYAKCGCVMDAGRVFDKIVVRDAVL------------------------------- 216
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN M+++ ++G E++ L EM EAT+V V+ A + + G+ IH +
Sbjct: 217 WNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGW 276
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G ++ V AL+D Y KCG + A +F+ + K VVSWNA+I+G A +G +
Sbjct: 277 RHG-FQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGAL 335
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+++M K P+ TFVGVL C+ L+++ R L+ M + I P ++HY CM+D+
Sbjct: 336 DLFDKM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDL 394
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LG G + EAYDLIR+MS++P++ +WG+LL+SC+ HG+VELAE A+++LI LEP +SGNY
Sbjct: 395 LGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNY 454
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+L+N+YA+ G+W+ E LR M + +KK+ S IE
Sbjct: 455 VILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIE 492
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 34/316 (10%)
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
Y + LL++C+ L G+ +H + G + +V LY + + +FD+
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ +++ + N++I G+ +WN G A+ L+
Sbjct: 108 IPKQNLFLWNVLIRGY----------------------AWN---------GPHDNAIILY 136
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
H+M D D T+ VL C+ L A+ G+ IH Y SG R + VG AL+D Y K
Sbjct: 137 HKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLF-VGAALIDMYAK 195
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG + A VF +I ++ V WN+M++ A NG + + L +M A GV P +AT V V
Sbjct: 196 CGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTV 255
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
++ A + RE+ H N + ++D+ + G V+ A L +
Sbjct: 256 ISSSADVACLPYGREIHG-FGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLR-EK 313
Query: 401 NAAIWGSLLSSCRTHG 416
W ++++ HG
Sbjct: 314 RVVSWNAIITGYAMHG 329
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 253/472 (53%), Gaps = 34/472 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LR H TR L ++ A F KL S ++ YA +F+Q+ +P+
Sbjct: 83 LRSAHAHLTRLRLPRLTAAFALSKLLAS--CVSAPAPAAAQAAASSYARNLFDQIPDPTA 140
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+NS+I+A G + +L+ P+ +T A LKAC V G+ +H +
Sbjct: 141 FCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQ 200
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+R G ++ G++ LY C Q+ VFD M+ GD
Sbjct: 201 ALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA-----------------GD---- 239
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+++V+W+ M+S + G +EAL LF EM+ E DE T+V+V+ CA+
Sbjct: 240 ---------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKA 290
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+G+W+H+Y + G+ + + AL+D Y KCG+++ AR VF + K+ +W+AM
Sbjct: 291 GALDLGKWVHAYIDRKGITVDL-ELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAM 349
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I G A +G E + L+ +M+ V PN TF+GVL+ CAH+GLVE R ++ M L
Sbjct: 350 IVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-G 408
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P++E+YGCMVD+L RSG + +AY + M + PN+ IW +LL +C++ +++AE A
Sbjct: 409 IKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESAT 468
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L+ LEP N NYVLLSN+YA +WD LR M+ NV G+S IE
Sbjct: 469 KRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIE 520
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 235/433 (54%), Gaps = 35/433 (8%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G LN+ A K+F ++ SV+ + ++ Y+ G E + LF + +G+ PD Y
Sbjct: 160 GRLND---AHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIV 216
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC+ VGDL G+ + + ++ +R +V LY CG+
Sbjct: 217 QVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK-------------- 262
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
++K +F M E+ +V+W+ MI + E + F +M
Sbjct: 263 -----------------MEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQML 305
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ + D+ ++V L CA LGA+D+G+W S + + + NAL+D Y KCG +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGAM 364
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
VFKE+ K++V NA ISGLA NG +L ++ Q G+SP+ +TF+G+L C
Sbjct: 365 ARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
HAGL++ F +++ ++++ +EHYGCMVD+ GR+G + +AY LI M +RPNA +
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LLS CR +LAE +KELI LEPWN+GNYV LSNIY+ GRWD+A +R M
Sbjct: 485 WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNR 544
Query: 465 NNVKKSPGQSLIE 477
+KK PG S IE
Sbjct: 545 KGMKKIPGYSWIE 557
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 199/419 (47%), Gaps = 34/419 (8%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
++I L+ +T HL Q+H + H LH ++ + + Y+ +F+ +
Sbjct: 14 QQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQF 73
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ L+N++I + N E + LF ++ G+ +TF +LKAC + ++G +
Sbjct: 74 PNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDL 133
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H +++ GF + ++ +Y+ G+++D KVF+E+ R V+ + G+
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYT----- 188
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+G+ EA+ LF +M + D +V VL C
Sbjct: 189 --------------------------TAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSAC 222
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G +D G+WI + E + +K V LV+ Y KCG ++ AR+VF + K++V+W
Sbjct: 223 VHVGDLDSGEWIVKHMEEMEM-QKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTW 281
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+ MI G A N + G+E + QM+ + + P++ + VG L+ CA G ++ E S+
Sbjct: 282 STMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLID 340
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + NL ++D+ + G + +++ + M + I + +S +GHV+L+
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 27 RHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
RH+ +NL +A+ + + + ++F +M+ +++ N+ I + NG +
Sbjct: 341 RHEF-LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSF 399
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-------QCVHGEIIRSGFERFGSIR 138
+F + LGI PD TF LL C+ G ++ G CV+ ++ E +G +
Sbjct: 400 AVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYA--LKRTVEHYGCM- 456
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHG 175
V+L+ G +DD ++ +M R + IV ++ G
Sbjct: 457 ---VDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 251/436 (57%), Gaps = 7/436 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAP 105
+ ++ A F QM ++ +NSMI Y+ G + +F+ +L++ + PD +T A
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLAS 284
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L AC + L +G+ +H I+ +GF+ G + ++ +Y+ CG ++ ++ ++ +D
Sbjct: 285 VLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 166 VIVRNL--MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ + ++ G+ K GD+++ +F +++R VV+W MI + G EA+ LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSM 404
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG-LYRKVVSVGNALVDFYCKCG 282
+ + T+ A+L + + L ++ G+ IH A SG +Y VSV NAL+ Y K G
Sbjct: 405 VGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYS--VSVSNALITMYAKAG 462
Query: 283 ILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
+ +A F I ++ VSW +MI LA +G E +EL+E M+ +G+ P+ T+VGV
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C HAGLV + R+ F M + I+P L HY CMVD+ GR+G ++EA + I M I P+
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
WGSLLS+CR + +++L + A + L+ LEP NSG Y L+N+Y+ G+W++A +R
Sbjct: 583 VVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 462 MRENNVKKSPGQSLIE 477
M++ VKK G S IE
Sbjct: 643 MKDGRVKKEQGFSWIE 658
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 200/477 (41%), Gaps = 73/477 (15%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
N R +H ++ L S ++ + ++V +A K+F++M + +N+++
Sbjct: 28 NGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87
Query: 73 KAYSLNGPSEEPVKLFALL---------------KNL----------------GIWPDEY 101
AY+ G + + F L KN+ GI P ++
Sbjct: 88 SAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQF 147
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
T +L + L G+ VH I++ G S+ ++ +Y CG VFD M
Sbjct: 148 TLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRM 207
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+D+ N MI + G +D + F +M ER +V+WN MIS + G D AL +F
Sbjct: 208 VVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFS 267
Query: 222 EM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M RD D T+ +VL CA L + IG+ IHS+ ++G + V NAL+ Y +
Sbjct: 268 KMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGI-VLNALISMYSR 326
Query: 281 CGILDTAR---------------------------------NVFKEIPRKNVVSWNAMIS 307
CG ++TAR N+F + ++VV+W AMI
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIV 386
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G +G + L+ M+ + PN T +L+ + + +++ S I
Sbjct: 387 GYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446
Query: 368 PNLEHYGCMVDVLGRSGCV---REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ ++ + ++G + A+DLIR + W S++ + HGH E A
Sbjct: 447 -SVSVSNALITMYAKAGSITSASRAFDLIRC---ERDTVSWTSMIIALAQHGHAEEA 499
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N ++ Y K G +D++ F +P+++ VSW MI G G+ + + +M+ +G+
Sbjct: 84 NTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIE 143
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P++ T VL A +E +++ + + L + N+ ++++ + G A
Sbjct: 144 PSQFTLTNVLASVAATRCLETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKV 202
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNS 436
+ M ++ + + W ++++ G ++LA +++ ++ WNS
Sbjct: 203 VFDRMVVK-DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 264/482 (54%), Gaps = 42/482 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+LL T L Q+HAH + L L+ + + T+ +A IFN + NP++
Sbjct: 13 LQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTI-VFTHALSIFNHIPNPTI 71
Query: 66 LLFNSMIKAYSLNGPSEE-PVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
L+N++I + + P L++ +L + + P+ +TF L KAC LR G+ +H
Sbjct: 72 FLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALH 131
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+++ L +C D V+ +++ + K G V
Sbjct: 132 THVLKF--------------LEPTC----------------DPFVQAALLNYYAKCGKVG 161
Query: 184 KGLYLFREMRERSVVSWNLMISS-LGKSGR-------DSEALRLFHEMRDQAFELDEATV 235
YLF ++ + + SWN ++S+ + SG E L LF EM+ + +E T+
Sbjct: 162 ACRYLFNQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTL 221
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
VA++ CA LGA+ G W H Y L VG AL+D Y KCG LD A +F ++P
Sbjct: 222 VALISACAELGALSQGAWAHVYVLKHNLKLNHF-VGTALIDMYSKCGCLDLACQLFDQLP 280
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++ + +NAMI G A +G G ++L+++M +G++P+ T V + C+H GLVE+ +
Sbjct: 281 HRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCD 340
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+F SM ++ + P LEHYGC+VD+LGR+G +REA + + +M ++PNA IW SLL + R H
Sbjct: 341 VFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVH 400
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G++E+ E +K LI LEP SGNYVLLSN+YA RWDD + +R M+++ + K PG SL
Sbjct: 401 GNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSL 460
Query: 476 IE 477
+E
Sbjct: 461 VE 462
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 260/478 (54%), Gaps = 8/478 (1%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNP 63
L LLH + T HL Q+HA ++ L + + + V+ C G + YA +I P
Sbjct: 35 LTLLHTQCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGEGRDAAYAARIVRYHPRP 94
Query: 64 SVLLFNSMIKAYSLNGPSEEP-VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
+ ++N+ I+A S +GP + V LF + P+ TF L A +G G +
Sbjct: 95 NSFMWNTAIRALS-DGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRADDGAAL 153
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G R + +Y S G+ D+ + +F + DV+ N I + G V
Sbjct: 154 HGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALSRAGRV 213
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
D+ +F M R+V +W+ M+S+ ++ R +A+ LF M+ E + +V+VL C
Sbjct: 214 DEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVEPNANVLVSVLGCC 273
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV-- 300
A LGA++ G W+H+Y + + + V ALVD YCKCG + AR VF + +
Sbjct: 274 ASLGALEQGAWVHAYIDKQDVGMNALVV-IALVDMYCKCGSIHKARQVFDTSRSQGLAKL 332
Query: 301 -SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
SWNAM+ GLA +G+ + + L+ ++ + G+ P+ TF+ +L H+G+ ++A+ LFAS
Sbjct: 333 SSWNAMMLGLAAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADEAKALFAS 392
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + + P +EHYGC+VD L R+G +REA D IR+M ++P+AAIWG+LLS CR HG E
Sbjct: 393 MAREYGVTPGIEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLHGDAE 452
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A + + +P +SG YVL +++ A G +R MRE V K PG S+IE
Sbjct: 453 AGARAARGAVECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAKVPGCSMIE 510
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 259/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R+ H + + V + K A +FN + + + + + +I + G
Sbjct: 291 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 350
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V+LF ++ + D++ A L+ C DL +G+ +H ++SG + +
Sbjct: 351 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 410
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y C + +F M+ +D++ MI + + G+V K F M E++V++
Sbjct: 411 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVIT 470
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + LR++ M + + D T V + CA LGA +G I
Sbjct: 471 WNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 530
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL SV NA++ Y KCG + AR VF + K++VSWNAMI+G + +G G+
Sbjct: 531 VKVGLIIDT-SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E+++ ++ +G P+ ++V VL+ C+H+GLV++ + F M H+I P LEH+ CMVD
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 649
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 650 LLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 709
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+L++ IYA+ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 710 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 748
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 37/418 (8%)
Query: 36 ILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
++ H V + G L + A ++F +M V +N+++ Y + ++ F +
Sbjct: 71 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130
Query: 94 LG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G WP+ +T A +K+C +G + + + + + + +V+++ CG +D
Sbjct: 131 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 190
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
++F + + RN M+ G+ K VD L LF M ER VVSWN+M+S+L +SGR
Sbjct: 191 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 250
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
EAL + +M+ + LD T + L CARL ++ G+ +H+ + L V +
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPHIDPYVAS 309
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
ALV+ Y K G A+ VF + +N V+W +ISG G VEL+ QM A+ ++
Sbjct: 310 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 369
Query: 333 NKATFVGVLT-CCAHAGLVEKARELFA---------------SMTGLHSIVPNLE----- 371
++ +++ CC+ L R+L + S+ +++ NL+
Sbjct: 370 DQFALATLISGCCSRMDLC-LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428
Query: 372 ----------HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ M+ + G V +A + MS N W ++L + HG E
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQHGAEE 485
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 170/376 (45%), Gaps = 52/376 (13%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
FA L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS--------------- 205
++H +VI N+M++G+ K G + + LF M R V SWN ++S
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 206 ---------------------SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
S G G S AL+L ++ + D A++ + R
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
GAVD+ + + ++ + N+++ Y K +D A +F +P ++VVSWN
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCR-----NSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
M+S L+ +GR +++ M +KGV + T+ LT CA + ++L A +
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI--- 297
Query: 365 SIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HV 418
+P+++ Y +V++ +SGC +EA + S+ R N A W L+S +G V
Sbjct: 298 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYGCFTESV 356
Query: 419 ELAEHAVKELINLEPW 434
EL EL+ L+ +
Sbjct: 357 ELFNQMRAELMTLDQF 372
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 248/443 (55%), Gaps = 4/443 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
++ VS+ G + A K+F+ + V + +MI + NG E + LF+ ++ G
Sbjct: 203 VSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEG- 261
Query: 97 WP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
WP DE ++ AC + R G+ HG R+G +++ ++ +Y+S +
Sbjct: 262 WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAAR 321
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD D N MI G+ K G V LF M ++ VSW MIS ++ + SE
Sbjct: 322 RLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSE 381
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL +F+ M+ Q + DE T+V+V+ C + +++ G+ +H Y Y V +G +L+
Sbjct: 382 ALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQ-YTITVILGTSLI 440
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV-SPNK 334
D Y KCG L++A VF + + WNA+I GLA NG ++++ +M + +PN+
Sbjct: 441 DMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNE 500
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
TF GVL+ C HAGLVE+ + F M + I+PN+ HYGCMVD+LGR+G V+EA +LI
Sbjct: 501 ITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIE 560
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
SM + P+ WG+LL SC HG E+ E ++L+NL+P + G + +LSNIYA G W
Sbjct: 561 SMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQH 620
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
+ LR M++ +V K PG S++E
Sbjct: 621 VKDLRGSMKQWHVPKIPGSSVVE 643
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 222/547 (40%), Gaps = 112/547 (20%)
Query: 17 HLTQIHAHF-----LRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNS 70
HL QIHA F L S LIL F + L ++ ++ + + P+ N
Sbjct: 19 HLLQIHAQFVASGLLADAFAASRLIL--FTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNM 76
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
++KA +G + L+A ++ PD YT L AC + G+ VH +R G
Sbjct: 77 VLKAAREHGLPHLCLPLYA---SMSAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHG 133
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F R + ++ +Y++CG + D KVFD D + N ++ + + DVD+ + +F
Sbjct: 134 FGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFA 193
Query: 191 EMRER-------------------------------SVVSWNLMISSLGKSGRDSEALRL 219
M ER V +W MIS ++G+ +EAL L
Sbjct: 194 RMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALAL 253
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---------------- 263
F +MR + + +DEA +V V+ CARL G+ H A +GL
Sbjct: 254 FSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSS 313
Query: 264 ------YRKVVSVGNALVDF--------YCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
R++ G L F Y K G + A+ +F +P K+ VSW MISG
Sbjct: 314 FLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGC 373
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
N + + ++ M A+G+ P++ T V V++ C + +E+ + + + H
Sbjct: 374 VQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTIT 432
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIR------------------------------ 399
+ ++D+ + GC+ A ++ +M R
Sbjct: 433 VILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMES 492
Query: 400 -----PNAAIWGSLLSSCRTHGHVELAEHAVKEL---INLEPWNSGNYVLLSNIYAEGGR 451
PN + +LS+CR G VE +H K + ++ P N +Y + ++ G
Sbjct: 493 SSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIP-NIRHYGCMVDLLGRAGY 551
Query: 452 WDDAETL 458
+AE L
Sbjct: 552 VKEAENL 558
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 235/419 (56%), Gaps = 7/419 (1%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQC 121
+ + + S I S NG E K F+ ++ G+ P+ TF LL C G G
Sbjct: 31 TTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGCGDFSSGSESFGDL 90
Query: 122 VHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+HG + G +R + +G ++ +Y+ G++ VFD M ++ + N MI G+ +K
Sbjct: 91 LHGYACKLGLDR-NHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGYMRK 149
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G +D LF EM ER ++SW MI+ K G EAL F EM+ E D ++AVL
Sbjct: 150 GKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAIIAVL 209
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C LGA+ G W+H Y S +R V V N+ +D +C+CG ++ A+ VF + ++ V
Sbjct: 210 AACTNLGALSFGLWVHRYLVSRD-FRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTV 268
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSWN++I + NG + + + +M +G PN TF G LT C+H GLVE+ F +
Sbjct: 269 VSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYFQT 328
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG-HV 418
M + I P +EHYGC+VD+ R+G + +A ++++SM ++PN + GSLL++CRTHG +
Sbjct: 329 MKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGNNT 388
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LAE +K L + + NYV+LSN+YA G+W+ A +R M+ +KK PG S IE
Sbjct: 389 VLAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 447
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 34/317 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+I A K+F++M ++ + +MI + G EE + F +++ G+ PD +L
Sbjct: 151 KIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAIIAVLA 210
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F + ++L+ CG ++ VFD M R V+
Sbjct: 211 ACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTVVS 270
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I F G D+ L FR M+E + F
Sbjct: 271 WNSVIVVFSANGHADESLVYFRRMQE-------------------------------EGF 299
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ + T L C+ +G V+ G ++ + + + ++ G LVD Y + G L+ A
Sbjct: 300 KPNAVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYG-CLVDLYSRAGRLEDA 358
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
NV + +P K N V ++++ +G + E + ++ + + +V + A
Sbjct: 359 LNVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAA 418
Query: 347 AGLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 419 DGKWEGASKMRRKMKGL 435
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 249/450 (55%), Gaps = 34/450 (7%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF- 88
LH + + V++ L + A ++F+ + V+ +NSMIKAY G ++ ++F
Sbjct: 162 LHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMKDDAARMFR 221
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
A++ + P+ T A +L AC GDL +G+ + + G E + +V +Y C
Sbjct: 222 AMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSALVGMYEKC 281
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G+M + +VFD ++H+D V+WN +I+
Sbjct: 282 GEMAEARRVFDAIAHKDN-------------------------------VAWNALITGYA 310
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++G EA+ LFH MR D+ T+V VL CA +GA+++G + YA G Y V
Sbjct: 311 QNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVY 370
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VG ALVD Y KCG L A VF+++P KN SWNA+I GLAFNGRG+ + +E M +
Sbjct: 371 -VGTALVDMYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQ 429
Query: 329 -GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
G+ P+ TF+GVL+ C HAGL++ R F S+T I+P +EHY CMVD+L R+G +
Sbjct: 430 EGLRPDDITFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLE 489
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA+D I + +P+A + G+LL++CR +VE++ + +++ LEP NS NYV+ S IYA
Sbjct: 490 EAWDFIEKIPGKPDAVMLGALLAACRKCKNVEVSVRVINKIMLLEPSNSWNYVVSSKIYA 549
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
R DD+ +R MRE V K PG S IE
Sbjct: 550 SSDRLDDSARMRGLMRERGVSKIPGCSWIE 579
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 172/409 (42%), Gaps = 44/409 (10%)
Query: 9 LHGR-NTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
LH R ++ + + Q+HAH L H H + +L+ S + Y +
Sbjct: 35 LHSRCHSLSTIQQLHAHLLHHDRPIPYNHFLSKLLSISSSSSPSTAAADYVHLLLTAHPT 94
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+ FN ++ ++ + P ++L + + PD YT LL A
Sbjct: 95 PTAFSFNVALRFFAASRPRTT-LQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAASA 153
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H + + G +V +Y++ G+ +VFD + RDV+ N MI + G
Sbjct: 154 HALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMK 213
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
D +FR M V N + ++ + C
Sbjct: 214 DDAARMFRAMVAEGAVPPNAVTVAVVLA------------------------------AC 243
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
G + +G+W+ + +S G+ + VG+ALV Y KCG + AR VF I K+ V+W
Sbjct: 244 RDAGDLALGRWLEEWVKSVGMEVGSL-VGSALVGMYEKCGEMAEARRVFDAIAHKDNVAW 302
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASM 360
NA+I+G A NG + + L+ M G P+K T VGVL+ CA G +E EL +A
Sbjct: 303 NALITGYAQNGMSKEAISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQ 362
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
G +S N+ +VD+ + G + A + + + N A W +L+
Sbjct: 363 RGFYS---NVYVGTALVDMYSKCGDLTRAIQVFEKLPCK-NEASWNALI 407
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 46/264 (17%)
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ S+N+ + S R L+L M A D T+ +L AR A H
Sbjct: 96 TAFSFNVALRFFAAS-RPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCPAPAFAASAH 154
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ + GL+ +V ++LV Y G AR VF I R++VVSWN+MI G
Sbjct: 155 ALLQKLGLHNHDHTV-HSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIKAYQAAGMK 213
Query: 316 ELGVELYEQMIAKG-VSPNKATF-----------------------------VGVLTCCA 345
+ ++ M+A+G V PN T VG L A
Sbjct: 214 DDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGMEVGSLVGSA 273
Query: 346 HAGLVEK------ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM--- 396
G+ EK AR +F ++ ++ + ++ ++G +EA L SM
Sbjct: 274 LVGMYEKCGEMAEARRVFDAIAHKDNVA-----WNALITGYAQNGMSKEAISLFHSMRQA 328
Query: 397 SIRPNAAIWGSLLSSCRTHGHVEL 420
RP+ +LS+C G +EL
Sbjct: 329 GARPDKITLVGVLSACAAVGALEL 352
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 269/479 (56%), Gaps = 12/479 (2%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
R ++ LL ++ + QIH H + H L + I + ++ ++++YA +F+ +
Sbjct: 5 RCVVGLLEQCSSMREMKQIHGHAITHGLARFAFISSKLLAFYAR-SDLRYAHTLFSHIPF 63
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ +N++I A+S + S F + N + P+ TF+ LL +
Sbjct: 64 PNLFDYNTIITAFSPHYSS----LFFIQMLNAAVSPNSRTFSLLLSKSSPSLPFL--HQL 117
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H IIR G + ++ Y++ G ++FD+ +++V ++ G+C G V
Sbjct: 118 HSHIIRRGHVSDFYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNGLV 177
Query: 183 DKGLYLFREM--RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ LF + RER+ VS++ M+S K+G E ++LF E++D+ + + + + +VL
Sbjct: 178 NDARNLFDAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLS 237
Query: 241 ICARLGAVDIGQWIHSYAES--SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
CA +GA + G+WIH+Y + S Y ++ +G AL+DFY KCG ++ A+ VF + K+
Sbjct: 238 ACASVGAFEEGKWIHAYVDQNKSQCYYEL-ELGTALIDFYTKCGCVEPAQRVFGNMKTKD 296
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V +W+AM+ GLA N + + +EL+E+M G PN TF+GVLT C H L +A +LF
Sbjct: 297 VAAWSAMVLGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFG 356
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M+ + IV ++EHYGC+VDVL RSG + EA + I+SM + P+ IWGSLL+ C H ++
Sbjct: 357 YMSDKYGIVASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHNNI 416
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EL K L+ LEP + G YVLLSN+YA G+W+ R +M++ V G S IE
Sbjct: 417 ELGHKVGKYLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSGSSFIE 475
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 260/493 (52%), Gaps = 24/493 (4%)
Query: 3 RKILR----LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN 58
R +LR LL +HL +HAH + S LA F++ + N + YA +
Sbjct: 3 RPLLRDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVLP 62
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q R ++L N+ I+A + GP P FA ++L + PD Y+ L++A +
Sbjct: 63 Q-RPATLLAHNAFIRALA-RGP--RPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAA 118
Query: 119 GQ--------------CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+ HG +R G ++ GV+ +Y + G + F E++
Sbjct: 119 EEKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACP 178
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ M+ GDVD LF M +R V+W+ MI+ GR EAL LF EM
Sbjct: 179 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 238
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ EAT+V+VL CA++G +D G+W+H Y S G+ + + +G ALVD Y KCG +
Sbjct: 239 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGM-QMSIKLGTALVDMYSKCGAV 297
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
TA VF+ + +NV +W + +SGLA NG G ++L+++M G+ PN +FV VL C
Sbjct: 298 VTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGC 357
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+ AGLV++ R F SM + + P EHYGCMVD+ GR+G + +A I M + P+ +
Sbjct: 358 SMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGV 416
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL++ R H V+L ++A+ +L+ +E N +V LSNIYAE W +R M+
Sbjct: 417 WGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKA 476
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 477 KGVKKVPGWSTIE 489
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 260/498 (52%), Gaps = 42/498 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H + RH + +++ V V ++ A KIF + +VL N+MI Y +G
Sbjct: 318 QLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESG 377
Query: 80 PSEEPVKLFALLKNLGI------W------------------------------PDEYTF 103
+ +LF + LGI W PD +T
Sbjct: 378 DVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTL 437
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC LR G+ +H + I G + + +VE+Y+ C + FDE+
Sbjct: 438 GSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVME 497
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSGRDSEALRL 219
+DV N +I G+ + +++ YL +M+ ++ +WN +++ L ++ + ++L
Sbjct: 498 KDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQL 557
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F EM+ D TV +LP C+RL ++ G+ H+++ G Y V +G ALVD Y
Sbjct: 558 FSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCG-YDTDVHIGAALVDMYA 616
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L A+ + I N+VS NAM++ A +G GE G+ L++ M+A G P+ TF+
Sbjct: 617 KCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLS 676
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ C H G VE E F M G +++ P L+HY MVD+L RSG + EAY+LI+ M +
Sbjct: 677 VLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVE 735
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
++ +WG+LL C THG++EL E A + LI LEP NSGNYVLL+N++A RW D +R
Sbjct: 736 CDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVR 795
Query: 460 MWMRENNVKKSPGQSLIE 477
M++ + KSPG S IE
Sbjct: 796 GMMKDRGMHKSPGCSWIE 813
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 203/432 (46%), Gaps = 64/432 (14%)
Query: 41 VSVCGTLNEIKYATKIFNQMRN-----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
++ C + A + +M++ P+V+ ++++I ++ NG EE +++ ++ G
Sbjct: 233 ITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEG 292
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+ T A +L AC + L +G+ +HG I R F + +V++Y CG M
Sbjct: 293 LVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAA 352
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSG 211
K+F + S ++V+ N MI G+C+ GDV K LF M ER ++SWN +IS ++
Sbjct: 353 KIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNF 412
Query: 212 RDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
EA +F M ++ E D T+ +VL CA ++ G+ IH+ A GL V
Sbjct: 413 MFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTF-V 471
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G ALV+ Y KC L A+ F E+ K+V +WNA+ISG + + E L E+M G
Sbjct: 472 GGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGY 531
Query: 331 SPNKATFVGVLTCCAHAGLVEKAR-----ELFASMTGLHSIVPNLEHYG----------- 374
PN T+ +L AGLVE + +LF+ M + + P++ G
Sbjct: 532 HPNIYTWNSIL-----AGLVENRQLDLTMQLFSEMQ-ISKLRPDIYTVGIILPACSRLAT 585
Query: 375 ------------------------CMVDVLGRSGCVRE---AYDLIRSMSIRPNAAIWGS 407
+VD+ + G ++ AYD I + PN +
Sbjct: 586 LERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISN----PNLVSHNA 641
Query: 408 LLSSCRTHGHVE 419
+L++C HGH E
Sbjct: 642 MLTACAMHGHGE 653
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 208/471 (44%), Gaps = 64/471 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HAH ++ I + + +K A +F M ++ + +++ Y +G
Sbjct: 80 QVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHG 139
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE LF +L+ G+ D + F + KAC G+G + +G+ +HG +I+ F +
Sbjct: 140 LFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSN 199
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE----- 194
++++Y CG +DD KV +M RD + N +I G V + L +M+
Sbjct: 200 ALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSM 259
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+VVSW+ +I ++G D EA+ + M+ + + T+ VLP CARL +D+G+ +
Sbjct: 260 PNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQL 319
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV--------------- 299
H Y V V NALVD Y +CG + A +F + KNV
Sbjct: 320 HGYITRHDFISNPVVV-NALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGD 378
Query: 300 --------------------VSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFV 338
+SWN++ISG N + +++ M+ +G+ P+ T
Sbjct: 379 VSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLG 438
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY----GCMVDVLGRS---GCVREAYD 391
VLT CA + + +E+ A +IV L+ G +V++ + + A+D
Sbjct: 439 SVLTACADTISLRQGKEIHA-----QAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFD 493
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL------INLEPWNS 436
+ + + W +L+S +E ++ ++++ N+ WNS
Sbjct: 494 EV----MEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNS 540
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 159/384 (41%), Gaps = 85/384 (22%)
Query: 58 NQMRNPSVLLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
N N + L F + +A+ +N ++ F+LL N + +Y A +L +C
Sbjct: 21 NIPHNLTALSFQKLKQAHQPVNISQQKNRSNFSLLDNKPLNTSKY--ASVLDSCKCP--- 75
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
++G+ VH I++GF+ G I ++++Y CG + D
Sbjct: 76 KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDAD--------------------- 114
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+LF M R++ SW ++S G EA LF ++ ELD
Sbjct: 115 ----------FLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFP 164
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVF 291
V C+ LG+V++G+ +H GL K + V NAL+D Y KCG LD A+ V
Sbjct: 165 LVFKACSGLGSVELGRQLH------GLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVL 218
Query: 292 KEIPRK------------------------------------NVVSWNAMISGLAFNGRG 315
++P + NVVSW+A+I G A NG
Sbjct: 219 VKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYD 278
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E +E+ +M +G+ PN T GVL CA ++ ++L +T H + N
Sbjct: 279 EEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITR-HDFISNPVVVNA 337
Query: 376 MVDVLGRSGCVREAYDLIRSMSIR 399
+VDV R G + A + S++
Sbjct: 338 LVDVYRRCGDMGGAAKIFLKFSVK 361
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 272/483 (56%), Gaps = 22/483 (4%)
Query: 9 LHGRNTRTHLTQIHAHFL---RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LH T HL Q+HAH + R + L F S+ L+ + YA ++F+ +P+V
Sbjct: 17 LHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASL--RLSCLPYARRLFDATPSPNV 74
Query: 66 LLFNSMIKAYSLNGP-----SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
L+++M+ AY+ + + + LF +L+ P+++ + +L+A +G +++
Sbjct: 75 FLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIG-VQLV 133
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H + GF IR +++ Y+ G M D K+FD ++ R+V+ ++ G+ +
Sbjct: 134 RSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSWTALVSGYARA 193
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G V + LF M +R V +WN +I+ ++G EA+ +F M D+ F + TV +L
Sbjct: 194 GKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLL 253
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEIP 295
C LG + IG+ IH YA +R V G N L+D Y KCG L A+ +F
Sbjct: 254 SACGHLGMLKIGKVIHGYA-----WRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFS 308
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+ + +WN++I+ LA +G E + ++ M +GV P++ TFVG+L C H G V++
Sbjct: 309 DRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLR 368
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +EHYGC+VD+L R+G ++A + I M ++P+ IWGSLL++CR H
Sbjct: 369 YFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIH 428
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-KKSPGQS 474
H+ELAEHA++ L++L P N+ V+L+N+Y+EGG W++ +R M+E+ KK PG S
Sbjct: 429 RHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCS 488
Query: 475 LIE 477
IE
Sbjct: 489 WIE 491
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 244/426 (57%), Gaps = 5/426 (1%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACL 111
A +F M S++ +N++I Y+ NG + +K F+ +L + PDE+T +L AC
Sbjct: 248 ALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACA 307
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE--MSHRDVIVR 169
+ L++G+ +H I+R+G I ++ Y G ++ ++ D+ ++ +VI
Sbjct: 308 NLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISF 367
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
++ G+ K GD + +F M R V++W MI ++G++ EA+ LF M E
Sbjct: 368 TALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPE 427
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+ T+ AVL CA L + G+ IH A S L + VSV NA++ Y + G + AR
Sbjct: 428 PNSHTLAAVLSACASLAYLGYGKQIHCRAIRS-LQEQSVSVSNAIITVYARSGSVPLARR 486
Query: 290 VFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF +I RK V+W +MI LA +G GE + L+E+M+ GV P++ T++GV + C HAG
Sbjct: 487 VFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAG 546
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
++K + + M H IVP + HY CMVD+L R+G + EA++ I+ M + P+ +WGSL
Sbjct: 547 FIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSL 606
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L++CR + +LAE A ++L++++P NSG Y L+N+Y+ GRW+DA + ++ VK
Sbjct: 607 LAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVK 666
Query: 469 KSPGQS 474
K G S
Sbjct: 667 KETGFS 672
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 179/407 (43%), Gaps = 39/407 (9%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F QM + + M+ + G + VK F + G+ P ++ +L +C
Sbjct: 116 ARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAA 175
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+G+ VH +I+ G + V+ +Y CG + VF+ M R N M
Sbjct: 176 TEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAM 235
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELD 231
+ + +G +D L +F M ERS+VSWN +I+ ++G D AL+ F M + E D
Sbjct: 236 VSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPD 295
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGL-------------YRKVVSVG------- 271
E TV +VL CA L + +G+ +HSY +G+ Y K SV
Sbjct: 296 EFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMD 355
Query: 272 ------------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
AL++ Y K G AR VF + ++V++W AMI G NG+ + +
Sbjct: 356 KAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAM 415
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA-SMTGLHSIVPNLEHYGCMVD 378
EL+ MI G PN T VL+ CA + +++ ++ L ++ + ++
Sbjct: 416 ELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSN--AIIT 473
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
V RSG V A + + R W S++ + HG L E A+
Sbjct: 474 VYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG---LGEQAI 517
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ----MDDGMKVF 158
FA LL+ + G+ +H +++G + ++ Y G + ++F
Sbjct: 28 FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87
Query: 159 DEMSH--RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D++ + R+ N ++ + K G + +F +M ER VSW +M+ L ++GR +A
Sbjct: 88 DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
++ F +M + + + VL CA A IG+ +HS+ GL V V N+++
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGL-SSCVPVANSVLY 206
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +TAR VF+ + ++ SWNAM+S GR +L + ++E M + + A
Sbjct: 207 MYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAI 266
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
G GL + A + F+ M S+ P+
Sbjct: 267 IAGY----NQNGLDDMALKFFSRMLTASSMEPD 295
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 33/290 (11%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L + K A ++F+ M N V+ + +MI Y NG ++E ++LF + G P+ +T A +
Sbjct: 377 LGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAV 436
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC + L G+ +H IRS E+ S+ ++ +Y G + +VFD++ R
Sbjct: 437 LSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWR-- 494
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ V+W MI +L + G +A+ LF EM
Sbjct: 495 ----------------------------KETVTWTSMIVALAQHGLGEQAIVLFEEMLRV 526
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D T + V C G +D G+ + + +S +VD + G+L
Sbjct: 527 GVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTE 586
Query: 287 ARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
A + +P + V W ++++ +L E++++ + P+ +
Sbjct: 587 AHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLS--IDPDNS 634
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N+L+ Y K G L AR VF ++P ++ VSW M+ GL GR V+ + M+ +G++
Sbjct: 101 NSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160
Query: 332 PNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
P++ VL+ CA R++ F GL S VP ++ + G+ G A
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVA---NSVLYMYGKCGDAETA 217
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ M +R ++ W +++S G ++LA
Sbjct: 218 RAVFERMKVRSESS-WNAMVSLYTHQGRMDLA 248
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--RNPSVLLFNSMIKAYSL 77
QIH +R QS + ++V + A ++F+Q+ R +V + SMI A +
Sbjct: 451 QIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETV-TWTSMIVALAQ 509
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+G E+ + LF + +G+ PD T+ + AC G + G+ + +++
Sbjct: 510 HGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQML 559
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 246/429 (57%), Gaps = 10/429 (2%)
Query: 55 KIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LG 112
KI +RN + ++NSMI+ Y L+ + + + N G+ + YTF PL+KAC LG
Sbjct: 341 KINLSLRN--IFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIKACTTLG 398
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+G VH ++ GF+ + ++E Y+ M +FD + +RDV++ M
Sbjct: 399 SSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAM 458
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ K GDV+ LF +M ER+ +SW+ ++++ + G E L LF M++ +E
Sbjct: 459 IDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNE 518
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+ +V+VL CA LGA+ G W+HSYA+ + + ALVD Y KCG +++A + F+
Sbjct: 519 SVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPI-LATALVDMYSKCGCVESALSTFQ 577
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
IP K+ +WNAMISG+A NG +EL+ +MI+ G P + TFV VLT C HA LV +
Sbjct: 578 GIPNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVRE 637
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLL 409
+LF M+ + + P EHY C+VD++ R+G + EA I R +A +WG+ L
Sbjct: 638 GLKLFEQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXL 697
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD-DAETLRMWMRENNVK 468
+CRT+G++E+ K+L ++ + G +VL N+Y E G WD +A+ +R + E +K
Sbjct: 698 GACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAG-WDMEAKRVRRLISEXGMK 756
Query: 469 KSPGQSLIE 477
K PG S+IE
Sbjct: 757 KKPGCSIIE 765
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 35/291 (12%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G + ++++A +F M + + +++++ AYS G +E + LF ++ G P+E
Sbjct: 463 GKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLV 522
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC +G L G VH + F+ + +V++Y+ CG ++ + F + ++
Sbjct: 523 SVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNK 582
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D N MI G GD +W ++L LF++M
Sbjct: 583 DAGAWNAMISGVAMNGD-----------------AW--------------KSLELFNKMI 611
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ E T VAVL C V G + S+ LVD + G+L
Sbjct: 612 SNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYGVEPQXEHYACLVDLMARAGML 671
Query: 285 DTARNVFKE----IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
A +E + R + W A + G E+G +++++ GV+
Sbjct: 672 AEAEKFIEEKMGGLGRGDANVWGAXLGACRTYGNIEVGNRVWKKLADMGVA 722
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 32 QSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKL 87
SN ILA S CG ++ A F + N +N+MI ++NG + + ++L
Sbjct: 550 DSNPILATALVDMYSKCGC---VESALSTFQGIPNKDAGAWNAMISGVAMNGDAWKSLEL 606
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
F + + G P E TF +L A C H ++R G + F
Sbjct: 607 FNKMISNGTQPTETTFVAVLTA-----------CTHARLVREGLKLF 642
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 248/443 (55%), Gaps = 4/443 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
++ VS+ G + A K+F+ + V + +MI + NG E + LF+ ++ G
Sbjct: 203 VSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEG- 261
Query: 97 WP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
WP DE ++ AC + R G+ HG R+G +++ ++ +Y+S +
Sbjct: 262 WPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAAR 321
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD D N MI G+ K G V LF M ++ VSW MIS ++ + SE
Sbjct: 322 RLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSE 381
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL +F+ M+ Q + DE T+V+V+ C + +++ G+ +H Y Y V +G +L+
Sbjct: 382 ALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQ-YTITVILGTSLI 440
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV-SPNK 334
D Y KCG L++A VF + + WNA+I GLA NG ++++ +M + +PN+
Sbjct: 441 DMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNE 500
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
TF GVL+ C HAGLVE+ + F M + I+PN+ HYGCMVD+LGR+G V+EA +LI
Sbjct: 501 ITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIE 560
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
SM + P+ WG+LL SC HG E+ E ++L+NL+P + G + +LSNIYA G W
Sbjct: 561 SMPMSPDVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQH 620
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
+ LR M++ +V K PG S++E
Sbjct: 621 VKDLRGSMKQWHVPKIPGSSVVE 643
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 222/547 (40%), Gaps = 112/547 (20%)
Query: 17 HLTQIHAHF-----LRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNS 70
HL QIHA F L S LIL F + L ++ ++ + + P+ N
Sbjct: 19 HLLQIHAQFVASGLLADAFAASRLIL--FTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNM 76
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
++KA +G + L+A ++ PD YT L AC + G+ VH +R G
Sbjct: 77 VLKAAREHGLPHLCLPLYA---SMSAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHG 133
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F R + ++ +Y++CG + D KVFD D + N ++ + + DVD+ + +F
Sbjct: 134 FGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFA 193
Query: 191 EMRER-------------------------------SVVSWNLMISSLGKSGRDSEALRL 219
M ER V +W MIS ++G+ +EAL L
Sbjct: 194 RMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALAL 253
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL---------------- 263
F +MR + + +DEA +V V+ CARL G+ H A +GL
Sbjct: 254 FSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSS 313
Query: 264 ------YRKVVSVGNALVDF--------YCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
R++ G L F Y K G + A+ +F +P K+ VSW MISG
Sbjct: 314 FLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGC 373
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
N + + ++ M A+G+ P++ T V V++ C + +E+ + + + H
Sbjct: 374 VQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTIT 432
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIR------------------------------ 399
+ ++D+ + GC+ A ++ +M R
Sbjct: 433 VILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMES 492
Query: 400 -----PNAAIWGSLLSSCRTHGHVELAEHAVKEL---INLEPWNSGNYVLLSNIYAEGGR 451
PN + +LS+CR G VE +H K + ++ P N +Y + ++ G
Sbjct: 493 SSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQHKYHIIP-NIRHYGCMVDLLGRAGY 551
Query: 452 WDDAETL 458
+AE L
Sbjct: 552 VKEAENL 558
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/472 (34%), Positives = 253/472 (53%), Gaps = 34/472 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LR H TR L ++ A F KL S ++ YA +F+Q+ +P+
Sbjct: 34 LRSAHAHLTRLRLPRLTAAFALSKLLAS--CVSAPAPAAAQAAASSYARNLFDQIPDPTA 91
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
+NS+I+A G + +L+ P+ +T A LKAC V G+ +H +
Sbjct: 92 FCYNSLIRALPAAGSAPALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQ 151
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+R G ++ G++ LY C Q+ VFD M+ GD
Sbjct: 152 ALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMA-----------------GD---- 190
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+++V+W+ M+S + G +EAL LF EM+ E DE T+V+V+ CA+
Sbjct: 191 ---------KNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKA 241
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA+D+G+W+H+Y + G+ + + AL+D Y KCG+++ AR VF + K+ +W+AM
Sbjct: 242 GALDLGKWVHAYIDRKGITVDL-ELSTALIDMYAKCGLIERARGVFDAMVEKDTKAWSAM 300
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I G A +G E + L+ +M+ V PN TF+GVL+ CAH+GLVE R ++ M L
Sbjct: 301 IVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-G 359
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P++E+YGCMVD+L RSG + +AY + M + PN+ IW +LL +C++ +++AE A
Sbjct: 360 IKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESAT 419
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L+ LEP N NYVLLSN+YA +WD LR M+ NV G+S IE
Sbjct: 420 KRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIE 471
>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 239/424 (56%), Gaps = 7/424 (1%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F+++ P+V + +++ YS NG S+E V+ ++ +K G+ PD+Y F + +AC
Sbjct: 416 AQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQ 475
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ L VG VH +++ G E + ++++Y+ G + G +VFDEM RDV+ N M
Sbjct: 476 LLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSM 535
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+CK+ + L +F M VV+WN MI AL F +M+ ++
Sbjct: 536 ISGYCKR--IQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQ 593
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ VLP C + G+ +H+Y + + V+ V NAL+ Y KCG + TA ++F
Sbjct: 594 ITISTVLPACD----LKSGKQVHAYITKNS-FSSVIPVWNALIHMYSKCGCIGTAYSIFS 648
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ +++VSWN MI G +G G+ ++L M V PN TF L+ C+H+GLV++
Sbjct: 649 NMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDE 708
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
ELF +MT P +EH+ C+VD+L R+ + +A I M ++P+ IW +LL++C
Sbjct: 709 GMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAAC 768
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R +V +A+ A ++L LEP ++GNYV LSNIYA GRWDDA +R M + + K G
Sbjct: 769 RAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGLVKPSG 828
Query: 473 QSLI 476
S I
Sbjct: 829 YSWI 832
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+A+ +F ++ + NV +W A++ + NG + V Y +M KGV P+K F V C
Sbjct: 415 SAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACG 474
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+E ++ + + +L+ ++D+ +SG V + M R + W
Sbjct: 475 QLLWLEVGIQVHKDVV-ICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVER-DVLSW 532
Query: 406 GSLLS 410
S++S
Sbjct: 533 NSMIS 537
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 271/504 (53%), Gaps = 47/504 (9%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-SVLLFNSMI 72
+++ Q+HA LR L +L L+ +S+ LN + + IFN + +P + L + S+I
Sbjct: 20 SKSQAKQLHAQILRTSLPSPSL-LSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSII 78
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR--SG 130
+ Y+ +G + F + G +PD F +LK+C + DLR G+ VHG IIR G
Sbjct: 79 RCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMG 138
Query: 131 FERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
F+ + + + + + S +++ KVFDE DV + + G + K +F
Sbjct: 139 FDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL--GSLRK---VF 193
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
M +R +VSWN +IS ++G +AL + EM + D T+ +VLPI A +
Sbjct: 194 EMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL 253
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ IH YA +G Y V +G++L+D Y KC +D + VF +P+ + +SWN++I+G
Sbjct: 254 KGKEIHGYAIRNG-YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC 312
Query: 310 AFNGRGELGVELYEQM-IAK-----------------------------------GVSPN 333
NG + G++ ++QM IAK GV PN
Sbjct: 313 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPN 372
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
F+ VLT C+HAGLV++A + F SMT + I+P LEHY + D+LGR G + EAY+ I
Sbjct: 373 YVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFI 432
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
M I P ++W +LL++CR H ++ELAE K+L ++P N G YVLLSNIY+ GRW
Sbjct: 433 SDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWK 492
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
DA LR+ MR+ +KK P S IE
Sbjct: 493 DARKLRIAMRDKGMKKKPACSWIE 516
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/459 (32%), Positives = 259/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R+ H + + V + K A +FN + + + + + +I + G
Sbjct: 311 QLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYG 370
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V+LF ++ + D++ A L+ C DL +G+ +H ++SG + +
Sbjct: 371 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 430
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y C + +F M+ +D++ MI + + G+V K F M E++V++
Sbjct: 431 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVIT 490
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + LR++ M + + D T V + CA LGA +G I
Sbjct: 491 WNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 550
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL SV NA++ Y KCG + AR VF + K++VSWNAMI+G + +G G+
Sbjct: 551 VKVGLIIDT-SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 609
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E+++ ++ +G P+ ++V VL+ C+H+GLV++ + F M H+I P LEH+ CMVD
Sbjct: 610 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVD 669
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 670 LLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 729
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+L++ IYA+ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 730 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 768
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 190/418 (45%), Gaps = 37/418 (8%)
Query: 36 ILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
++ H V + G L + A ++F +M V +N+++ Y + ++ F +
Sbjct: 91 VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150
Query: 94 LG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G WP+ +T A +K+C +G + + + + + + +V+++ CG +D
Sbjct: 151 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVD 210
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
++F + + RN M+ G+ K VD L LF M ER VVSWN+M+S+L +SGR
Sbjct: 211 LASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGR 270
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
EAL + +M+ + LD T + L CARL ++ G+ +H+ + L V +
Sbjct: 271 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-LPHIDPYVAS 329
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
ALV+ Y K G A+ VF + +N V+W +ISG G VEL+ QM A+ ++
Sbjct: 330 ALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTL 389
Query: 333 NKATFVGVLT-CCAHAGLVEKARELFA---------------SMTGLHSIVPNLE----- 371
++ +++ CC+ L R+L + S+ +++ NL+
Sbjct: 390 DQFALATLISGCCSRMDLC-LGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448
Query: 372 ----------HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ M+ + G V +A + MS N W ++L + HG E
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMS-EKNVITWNAMLGAYIQHGAEE 505
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 170/376 (45%), Gaps = 52/376 (13%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
FA L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS--------------- 205
++H +VI N+M++G+ K G + + LF M R V SWN ++S
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 206 ---------------------SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
S G G S AL+L ++ + D A++ + R
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
GAVD+ + + ++ + N+++ Y K +D A +F +P ++VVSWN
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCR-----NSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 260
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
M+S L+ +GR +++ M +KGV + T+ LT CA + ++L A +
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI--- 317
Query: 365 SIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HV 418
+P+++ Y +V++ +SGC +EA + S+ R N A W L+S +G V
Sbjct: 318 RNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVA-WTVLISGFLQYGCFTESV 376
Query: 419 ELAEHAVKELINLEPW 434
EL EL+ L+ +
Sbjct: 377 ELFNQMRAELMTLDQF 392
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 257/477 (53%), Gaps = 46/477 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRH----KLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+L+ +G+ + IH H ++ L N ++ + S CG L + YA K+F +M
Sbjct: 127 LLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSY-SKCGLLG-VNYAMKLFMEM 184
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
++ +NSMI L+KA GDL +
Sbjct: 185 GEKDLVSWNSMIGG-------------------------------LVKA----GDLGRAR 209
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+ E+ + +I G Y G+M +F++M R+V+ + M+ G+CK G
Sbjct: 210 KLFDEMAERDAVSWNTILDG----YVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTG 265
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D++ LF +M +++V+W ++IS + G EA L+++M + D+ T++++L
Sbjct: 266 DMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILA 325
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA G + +G+ +H+ + + + V+V NALVD Y KCG +D A ++F E+ +++V
Sbjct: 326 ACAESGLLVLGKKVHASIKKIRI-KCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLV 384
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN M+ GLA +G GE ++L+ +M +G P+K T + +L C HAG V++ F SM
Sbjct: 385 SWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSM 444
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
H IVP++EHYGCM+D+LGR G + EA+ L++SM + PN IWG+LL +CR H V L
Sbjct: 445 ERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPL 504
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE + LI LE + GNY +LSNI+A G W+ +R+ M+ V+K G S IE
Sbjct: 505 AEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIE 561
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 208/420 (49%), Gaps = 48/420 (11%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+ LH H+ ++HA ++ LH + +S +++ A +FNQ+++P+V
Sbjct: 27 LQDLHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNV 86
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
L+N++I+A+ N S + F ++ G++ D +T+ LLKAC G G L Q +H
Sbjct: 87 HLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCH 146
Query: 126 IIRSGFERFGSIRI--GVVELYTSCGQM--DDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+ + GF FG + + +++ Y+ CG + + MK+F EM +D++ N MI G K GD
Sbjct: 147 VEKYGF--FGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGD 204
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+ + LF EM ER VSWN ++ K+G S+A LF +M +
Sbjct: 205 LGRARKLFDEMAERDAVSWNTILDGYVKAGEMSQAFNLFEKMPE---------------- 248
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
R VVS + +V YCK G ++ AR +F ++P KN+V+
Sbjct: 249 -----------------------RNVVS-WSTMVSGYCKTGDMEMARMLFDKMPFKNLVT 284
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W +ISG A G + LY QM A G+ P+ T + +L CA +GL+ +++ AS+
Sbjct: 285 WTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIK 344
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I ++ +VD+ + G V +A + MS+R + W +L HGH E A
Sbjct: 345 KIR-IKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR-DLVSWNCMLQGLAMHGHGEKA 402
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/471 (36%), Positives = 251/471 (53%), Gaps = 34/471 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLN--EIKYATKIFNQMR 61
+LRL + QIHA LR + S+ +LA H + L ++YA + +++
Sbjct: 18 LLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAVLSRLL 77
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
L + + S P L + PD +T+ PLL+AC + LR G+C
Sbjct: 78 PHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLALPDTHTYPPLLQACARLLALREGEC 137
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H E ++GF ++ +V LY +CG + KVFDEM
Sbjct: 138 LHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMP------------------- 178
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+R R++VSWN M++S +GR +E L +F EM F D T+V+VL
Sbjct: 179 ----------VRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTA 228
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR-KNVV 300
CA GA+ +G+ +H Y E GL V NAL+D Y KCG ++ AR +F+E+ + VV
Sbjct: 229 CAEFGALALGRRVHVYVEKVGLVENS-HVSNALIDLYAKCGSVNDARRIFEEMGLGRTVV 287
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW ++I GLA NG G+ +EL+ M + + P + T VGVL C+H GLV+ F M
Sbjct: 288 SWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRM 347
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EH GCMVD+LGR+G V EAYD I +M + PNA +W +LL SC H +EL
Sbjct: 348 KEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLEL 407
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
+ A + L+ L+P +SG+YVLLSN+YA G W D LR M ++ V+K+P
Sbjct: 408 GKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNP 458
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 213/333 (63%), Gaps = 1/333 (0%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y + G++ + +VFD M RD++ N MIHG+ G+VD +F M +R SW+ M+
Sbjct: 116 YVTRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMM 175
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S+ K R +AL L+ EMR D T+V+VL C+ +GA+ +G +H + ES+G+
Sbjct: 176 SAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVE 235
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
V +G AL+D Y KCG ++ + VF +P K+V++W++MI GLA +G G + L+ +
Sbjct: 236 LDV-KLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSR 294
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M+++G+ PN+ TF+GVL C H GLV ++ F+SM+ +H + P ++HYGCMVD+LGRSG
Sbjct: 295 MLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSG 354
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
+ EA LIR M P+A IW +LL +CR + +VE+AE A+ +L L+P G+YVLLSN
Sbjct: 355 HIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSN 414
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA+ W+ +R +R +++ PG+S IE
Sbjct: 415 IYAQANSWEGVAEMRRTLRRERIQRIPGRSSIE 447
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 73/335 (21%)
Query: 27 RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP------ 80
R + N++LA +V T E+ A ++F+ MR ++ +N+MI Y++NG
Sbjct: 103 RRDVFLCNVMLAAYV----TRGEVAEARRVFDGMRERDMVSWNTMIHGYAVNGEVDLARE 158
Query: 81 -------------------------SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
S++ ++L+ ++ + PD T +L AC +G
Sbjct: 159 VFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGA 218
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
L VG VH + +G E + ++++Y CG +++ ++VF M +DV+
Sbjct: 219 LAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVL-------- 270
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+W+ MI L G +AL LF M + + +E T
Sbjct: 271 -----------------------TWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTF 307
Query: 236 VAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+ VL C LG V G ++ S + G+ KV G +VD + G ++ A+ + +++
Sbjct: 308 IGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYG-CMVDLLGRSGHIEEAKQLIRDM 366
Query: 295 P-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
P + V W A++ R VE+ E+ +AK
Sbjct: 367 PFEPDAVIWRALLGAC----RIYKNVEVAEEAMAK 397
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 210/334 (62%), Gaps = 1/334 (0%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y G M + +FD+M RDV+ N ++ G+ GD++ +F +M ER+V SWN +I
Sbjct: 47 YIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLI 106
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
++GR SE L F M D+ + ++AT+ VL CA+LGA D G+W+H Y E+ G
Sbjct: 107 KGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGY 166
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+ V+V NAL+D Y KCG ++ A VFK I R++++SWN MI+GLA +G G + L+
Sbjct: 167 NKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFH 226
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+M G+SP+K TFVGVL C H GLVE F SM SI+P +EH GC+VD+L R+
Sbjct: 227 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 286
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLS 443
G + +A + I M ++ +A IW +LL + + + V++ E A++ELI LEP N N+V+LS
Sbjct: 287 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 346
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NIY + GR+DDA L++ MR+ KK G S IE
Sbjct: 347 NIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 380
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 141/322 (43%), Gaps = 41/322 (12%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTF 103
+ +++ ++F+ M +V +N +IK Y+ NG E + F + + G + P++ T
Sbjct: 79 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATM 138
Query: 104 APLLKACLGVGDLRVGQCVH--GEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDE 160
+L AC +G G+ VH GE + G+ + +++ ++++Y CG ++ M+VF
Sbjct: 139 TLVLSACAKLGAFDFGKWVHKYGETL--GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 196
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ RD+I N MI+G G +EAL LF
Sbjct: 197 IKRRDLISWNTMINGLAAHG-------------------------------HGTEALNLF 225
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYC 279
HEM++ D+ T V VL C +G V+ G + +S + ++ G +VD
Sbjct: 226 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCG-CVVDLLS 284
Query: 280 KCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
+ G L A ++P K + V W ++ + ++G E++I K N A FV
Sbjct: 285 RAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI-KLEPRNPANFV 343
Query: 339 GVLTCCAHAGLVEKARELFASM 360
+ AG + A L +M
Sbjct: 344 MLSNIYGDAGRFDDAARLKVAM 365
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 46/273 (16%)
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M ++V++ MI+G+ D+ F ER +V WN MIS + G EA LF
Sbjct: 1 MVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLF 60
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M + D+ W N +++ Y
Sbjct: 61 DQMPCR----------------------DVMSW------------------NTVLEGYAN 80
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVG 339
G ++ VF ++P +NV SWN +I G A NGR + +++M+ +G V PN AT
Sbjct: 81 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 140
Query: 340 VLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
VL+ CA G + + + + G + + N+++ ++D+ G+ G + A ++ + +
Sbjct: 141 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKN--ALIDMYGKCGAIEIAMEVFKGIK 198
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
R + W ++++ HGH A + E+ N
Sbjct: 199 -RRDLISWNTMINGLAAHGHGTEALNLFHEMKN 230
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ + G I+ A ++F ++ ++ +N+MI + +G E + LF +KN GI PD
Sbjct: 177 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 236
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDG 154
+ TF +L AC +G + G + I E G VV+L + G +
Sbjct: 237 KVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC----VVDLLSRAGFLTQA 292
Query: 155 MKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFRE---MRERSVVSWNLMISSLGKS 210
++ ++M + D ++ ++ VD G E + R+ ++ ++ + G +
Sbjct: 293 VEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDA 352
Query: 211 GRDSEALRLFHEMRDQAFE 229
GR +A RL MRD F+
Sbjct: 353 GRFDDAARLKVAMRDTGFK 371
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 236/434 (54%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A K+F+++ V+ +N+MI Y+ G ++E ++LF + + PDE T ++ A
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + +G+ VH I GF I +++LY CG+
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGE------------------- 285
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
V+ LF + + V+SWN +I EAL LF EM
Sbjct: 286 ------------VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA++IG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVY-----INKRLKGVANASSHRTSLIDMYAKCGD 388
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ VF I +++ SWNAMI G A +GR +++ +M + P+ TFVG+L+
Sbjct: 389 IEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSA 448
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SM + I P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 449 CSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 508
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ + +VEL E + LI +EP N G+YVLLSNIYA GRW++ +R +
Sbjct: 509 IWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLN 568
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 569 DKGMKKVPGCSSIE 582
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 226/420 (53%), Gaps = 6/420 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + C + + YA +F ++
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ + L+ + +LG+ P+ YTF LLK+C R GQ +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G++ + ++ +Y G+++D KVFD+ SHRDV+ +I G+ KG +
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+F E+ + VVSWN MIS ++G + EAL LF EM DE+T+V+V+ C
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ ++++G+ +HS+ + G + + + NAL+D Y KCG ++TA +F+ + K+V+SW
Sbjct: 246 AQSASIELGRQVHSWIDDHG-FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N +I G + + L+++M+ G SPN T + +L CAH G +E R + +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364
Query: 363 -LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
L + H ++D+ + G + A + S+ R ++ W +++ HG A
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSS-WNAMIFGFAMHGRANAA 423
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 226/389 (58%), Gaps = 6/389 (1%)
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI-RIGVVELYTSCGQMDD 153
G +PDE T + ++ AC G+ R G+ VH +++ R + +V++Y CG+ +
Sbjct: 5 GFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWE 64
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+FD M R V+ ++ G+ K +V+ +F +M E++V++WN++I++ ++G +
Sbjct: 65 ARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEE 124
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY-----RKVV 268
EA+RLF +++ + T VL C + + +GQ H + G V
Sbjct: 125 EEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDV 184
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VGN+LVD Y K G +D VF+ + ++ VSWNAMI G A NGR + + L+E+M+
Sbjct: 185 FVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCS 244
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+P+ T +GVL+ C H+GLV++ R F MT H I P+ +HY CMVD+LGR+G ++E
Sbjct: 245 NENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKE 304
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A +LI+ M P++ +W SLL +CR H +VEL E L L+P NSG YVLLSN+YAE
Sbjct: 305 AEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAE 364
Query: 449 GGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+W D +R M++ V K PG S IE
Sbjct: 365 MGKWADVFRVRRSMKDRGVSKQPGCSWIE 393
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 40/277 (14%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A +F+QM +V+ +N +I AY+ NG EE ++LF LK IWP YT+ +L A
Sbjct: 93 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 152
Query: 110 CLGVGDLRVGQCVHGEIIRSGFE-RFG---SIRIG--VVELYTSCGQMDDGMKVFDEMSH 163
C + L++GQ H +++ GF FG + +G +V++Y G +DDG KVF+ M+
Sbjct: 153 CGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 212
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
RD + N MI G+ + G R +AL LF M
Sbjct: 213 RDNVSWNAMIVGYAQNG-------------------------------RAKDALHLFERM 241
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
D T++ VL C G VD G + H E G+ +VD + G
Sbjct: 242 LCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHY-TCMVDLLGRAG 300
Query: 283 ILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELG 318
L A + K++P + + V W +++ + ELG
Sbjct: 301 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELG 337
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M F DE T+ +V+ CA L A G+ +H++ R + + NALVD Y KCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 283 ILDTARNVFKEIP-------------------------------RKNVVSWNAMISGLAF 311
AR +F +P KNV++WN +I+ A
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLH-SIVP 368
NG E + L+ Q+ + P T+ VL C + +++ ++ + G P
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGP 180
Query: 369 NLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
+ + +VD+ ++G + + + M+ R N + W +++ +G + A H +
Sbjct: 181 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS-WNAMIVGYAQNGRAKDALHLFE 239
Query: 427 ELI 429
++
Sbjct: 240 RML 242
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M+A G P++ T V++ CA + R++ A M + ++ +VD+ + G
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLL 442
EA + SM R + S+L+ +VE A+ +++ N+ WN +L
Sbjct: 61 RTWEARCIFDSMPSR-SVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWN-----VL 114
Query: 443 SNIYAEGGRWDDAETLRMWMRENNV 467
YA+ G ++A L + ++ +++
Sbjct: 115 IAAYAQNGEEEEAIRLFVQLKRDSI 139
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 247/424 (58%), Gaps = 12/424 (2%)
Query: 62 NPSVLLFNSMIKAYS---LNGPSEEP-VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
N ++N++I+A + + P+ P + L+ ++ + PD +TF LL++ +
Sbjct: 21 NIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS---INTPH 77
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ +H +I+ G ++ ++ +Y+SCG + FDE++ D+ N +IH
Sbjct: 78 RGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANA 137
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD---QAFELDEAT 234
K G + LF +M E++V+SW+ MI G AL LF ++ +E T
Sbjct: 138 KAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFT 197
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+ +VL CARLGA+ G+W+H+Y + +G+ VV +G +L+D Y KCG ++ A+ +F +
Sbjct: 198 MSSVLSACARLGALQHGKWVHAYIDKTGMKIDVV-LGTSLIDMYAKCGSIERAKCIFDNL 256
Query: 295 -PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
P K+V++W+AMI+ + +G E +EL+ +M+ GV PN TFV VL C H GLV +
Sbjct: 257 GPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEG 316
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
E F M + + P ++HYGCMVD+ R+G + +A+++++SM + P+ IWG+LL+ R
Sbjct: 317 NEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGAR 376
Query: 414 THGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
HG VE E A+ +L+ L+P NS YVLLSN+YA+ GRW + LR M +KK PG
Sbjct: 377 IHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGC 436
Query: 474 SLIE 477
SL+E
Sbjct: 437 SLVE 440
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 38/273 (13%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPL 106
I A K+F+QM +V+ ++ MI Y G + + LF L+ L + P+E+T + +
Sbjct: 142 IHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSV 201
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRD 165
L AC +G L+ G+ VH I ++G + + ++++Y CG ++ +FD + +D
Sbjct: 202 LSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKD 261
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V+ + MI F G E L LF M +
Sbjct: 262 VMAWSAMITAF-------------------------------SMHGLSEECLELFARMVN 290
Query: 226 QAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ T VAVL C G V G ++ G+ + G +VD Y + G +
Sbjct: 291 DGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYG-CMVDLYSRAGRI 349
Query: 285 DTARNVFKEIP-RKNVVSWNAMISGLAFNGRGE 316
+ A NV K +P +V+ W A+++G +G E
Sbjct: 350 EDAWNVVKSMPMEPDVMIWGALLNGARIHGDVE 382
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 251/456 (55%), Gaps = 20/456 (4%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
IL F+ CG ++ A + F ++ V ++N M+ Y+ G ++ + +F + G
Sbjct: 152 ILDMFIK-CGRMD---IARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEG 207
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDD 153
+ P+ T A + AC + LR G+ +HG I+ E + +G +V+ Y C ++
Sbjct: 208 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVDYYAKCRSVEV 266
Query: 154 GMKVFDEMSHRDVIVRNLM--IHGFCKKGDVDKGLYLFR----------EMRERSVVSWN 201
+ F + D++ N M + GF + GD L F+ E+ R VV WN
Sbjct: 267 ARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWN 326
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
+IS+ +SGR AL L EM E++ T+V+ LP C++L A+ G+ IH +
Sbjct: 327 SIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRC 386
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
GL + N+L+D Y +CG + +R +F +P++++VSWN MIS +G G V L
Sbjct: 387 GL-DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNL 445
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
++Q G+ PN TF +L+ C+H+GL+E+ + F M +++ P +E Y CMVD+L
Sbjct: 446 FQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLS 505
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
R+G E + I M PNAA+WGSLL +CR H + +LAE+A + L LEP +SGNYVL
Sbjct: 506 RAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL 565
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++NIY+ GRW+DA +R M+E V K PG S IE
Sbjct: 566 MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIE 601
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 201/476 (42%), Gaps = 107/476 (22%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + + + + V ++ A ++F++M +V + ++++ Y G
Sbjct: 31 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 90
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +KLF L+ N G+ PD + F + KAC + + RVG+ V+ ++ GFE ++
Sbjct: 91 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+++++ CG+MD + F+E+ +DV + N+M+ G+ KG+ K L +FR+M V
Sbjct: 151 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGV-- 208
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+ + T+ + + C L + G+ IH Y
Sbjct: 209 -----------------------------KPNSITIASAVSACTNLSLLRHGREIHGYCI 239
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTAR------------------------------- 288
+ VGN+LVD+Y KC ++ AR
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299
Query: 289 ------------NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
+VF E+ ++VV WN++IS A +GR ++L +M V N T
Sbjct: 300 ALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 359
Query: 337 FVGVLTCCAHAGLVEKAREL--FASMTGLHS--------------------------IVP 368
V L C+ + + +E+ F GL + ++P
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 369 --NLEHYGCMVDVLGRSGCVREAYDL---IRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+L + M+ V G G +A +L R+M ++PN + +LLS+C G +E
Sbjct: 420 QRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 475
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 143/318 (44%), Gaps = 41/318 (12%)
Query: 98 PDE--YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
PDE +A +L+ C + +LR+G VH +++ +G + + ++E+Y G ++D
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD+MS R+V ++ +C GD + E
Sbjct: 66 RMFDKMSERNVFSWTAIMEMYCGLGDYE-------------------------------E 94
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
++LF+ M ++ D V C+ L +G+ ++ Y S G + V +++
Sbjct: 95 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSIL 153
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG +D AR F+EI K+V WN M+SG G + + ++ +M+ +GV PN
Sbjct: 154 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSI 213
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV---REAYDL 392
T ++ C + L+ RE+ + + +L +VD + V R + +
Sbjct: 214 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 273
Query: 393 IRSMSIRPNAAIWGSLLS 410
I+ + + W ++L+
Sbjct: 274 IK----QTDLVSWNAMLA 287
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH +R L N IL + + G I+ + +IF+ M ++ +N MI Y ++G
Sbjct: 378 EIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHG 437
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ V LF + +G+ P+ TF LL A C H +I G++ F ++
Sbjct: 438 FGMDAVNLFQQFRTMGLKPNHITFTNLLSA-----------CSHSGLIEEGWKYFKMMKT 486
Query: 140 G------------VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK---KGDVDK 184
+V+L + GQ ++ ++ ++M + G C+ D+ +
Sbjct: 487 EYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAE 546
Query: 185 --GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
YLF E+ +S ++ LM + +GR +A ++ M+++
Sbjct: 547 YAARYLF-ELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKER 589
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/483 (33%), Positives = 272/483 (56%), Gaps = 22/483 (4%)
Query: 9 LHGRNTRTHLTQIHAHFL---RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
LH T HL Q+HAH + R + L F S+ L+ + YA ++F+ +P+V
Sbjct: 235 LHRCATLAHLKQLHAHAVVTGRAAAQTTTFHLLRFASL--RLSCLPYARRLFDATPSPNV 292
Query: 66 LLFNSMIKAYSLNGP-----SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
L+++M+ AY+ + + + LF +L+ P+++ + +L+A +G +++
Sbjct: 293 FLYSAMLSAYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIG-VQLV 351
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H + GF IR +++ Y+ G M D K+FD ++ R+V+ ++ G+ +
Sbjct: 352 RSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGLTDRNVVSWTALVSGYARA 411
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G V + LF M +R V +WN +I+ ++G EA+ +F M D+ F + TV +L
Sbjct: 412 GKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLL 471
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVG----NALVDFYCKCGILDTARNVFKEIP 295
C LG + IG+ IH YA +R V G N L+D Y KCG L A+ +F
Sbjct: 472 SACGHLGMLKIGKVIHGYA-----WRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFS 526
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+ + +WN++I+ LA +G E + ++ M +GV P++ TFVG+L C H G V++
Sbjct: 527 DRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLR 586
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +EHYGC+VD+L R+G ++A + I M ++P+ IWGSLL++CR H
Sbjct: 587 YFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIH 646
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV-KKSPGQS 474
H+ELAEHA++ L++L P N+ V+L+N+Y+EGG W++ +R M+E+ KK PG S
Sbjct: 647 RHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCS 706
Query: 475 LIE 477
IE
Sbjct: 707 WIE 709
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 238/434 (54%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+ I Y+ G +E ++LF + + PDE T +L A
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACG------------- 291
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
LF+ + + V+SWN +I EAL LF +M +
Sbjct: 292 ------------------LFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK 333
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++L CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 334 PNDVTMLSILSACAHLGAIDIGRWIHVYID-----KRLKGVTNASSLRTSLIDMYAKCGD 388
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A+ VF + +++ SWNAMI G A +GR +++ +M G+ P+ TFVG+L+
Sbjct: 389 IEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 448
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F SMT + ++P LEHYGCM+D+ G SG +EA +I +M + P+
Sbjct: 449 CSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGV 508
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP N G+YVLLSNIYA RW++ R +
Sbjct: 509 IWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLN 568
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 569 DKGMKKVPGCSSIE 582
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 233/461 (50%), Gaps = 39/461 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + C + + YA +F+ ++
Sbjct: 6 LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P +L++N+M + ++L+ +KL+ + +LG+ P+ YTF LLK+C + GQ +
Sbjct: 66 PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG++++ GF+ I ++ +Y G+++D KV D+ SHRDV+ +I G+ +G +
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ +F E+ + VVSWN IS ++G EAL LF +M DE+T+V VL C
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ G++++G+ +HS+ G + + + NAL+D Y KCG L+TA +F+ + K+V+SW
Sbjct: 246 AQSGSIELGRQVHSWINDHG-FGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE----------- 351
N +I G + + L++ M+ G PN T + +L+ CAH G ++
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364
Query: 352 ------KARELFASMTGLHSIVPNLEHYGCMVDVL------------------GRSGCVR 387
A L S+ +++ ++E + D + GR+
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ + +R I P+ + LLS+C G ++L H + +
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/484 (35%), Positives = 269/484 (55%), Gaps = 40/484 (8%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRH-KLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+ + L LL + L QIHA +R+ H S+L L + +L + YA ++FNQ+
Sbjct: 25 QSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDYACRVFNQI 84
Query: 61 RNPSVLLFNSMIKA--YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
NP+ ++N++I A SL+ + + +L+ + PD++TF LLKAC V L
Sbjct: 85 DNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSE 144
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H +I + G + DV V N +IH +
Sbjct: 145 GRQAHAQIFKLGLDL-------------------------------DVYVGNSLIHLYAS 173
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G + L +F +M RS+VSWN+MI + +SG AL+LF EM++ +FE D T+ ++
Sbjct: 174 CGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQN-SFEPDGYTMQSI 232
Query: 239 LPICARLGAVDIGQWIHSYA--ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+ CA +GA+ +G W H+Y ++SG V + ++LVD Y KCG L A+ VF+ +P+
Sbjct: 233 VSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPK 292
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARE 355
++ SWN+MI LA +GRG+ ++ + +++ + PN TFVGVL+ C H G+V R+
Sbjct: 293 HDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRK 352
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC-RT 414
F M + I P LEHYGC+VD+L RSG + EA +L+ +M I+P+A IW SLL +C +
Sbjct: 353 YFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQ 412
Query: 415 HGHVELAEH-AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQ 473
+ VEL+E A K L + + +SG YV+LS +YA +W+D +R M + V K PG
Sbjct: 413 NAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGC 472
Query: 474 SLIE 477
S IE
Sbjct: 473 SSIE 476
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/524 (32%), Positives = 272/524 (51%), Gaps = 66/524 (12%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ Q+HA L+ + + + +++ +N++ YA IF++++ S++ +N++IK Y
Sbjct: 29 VEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCY 88
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
N S + + LF L + + PD +T ++K C +G ++ G+ +HG ++ GF
Sbjct: 89 VENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDV 147
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ +V +Y+ CG++D KVFD M +DV++ N +I G+ + G++D L LF EM ER
Sbjct: 148 FVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER 207
Query: 196 -------------------------------SVVSWNLMISSLGKSGRDSEALRLFHEM- 223
++VSWN MI+ KSG AL LF++M
Sbjct: 208 DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP 267
Query: 224 ---------RDQAFELD---------------------EATVVAVLPICARLGAVDIGQW 253
+EL+ AT+V+VL + L + G+W
Sbjct: 268 IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRW 327
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IHSY E +G + +G +L++ Y KCG +++A VF+ I +K V W A+I GL +G
Sbjct: 328 IHSYMEKNGFELDGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHG 386
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
+ L+ +M G+ PN F+GVL C HAGLV+ R+ F M + I P LEHY
Sbjct: 387 MANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHY 446
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP 433
GC+VD+L R+G + EA + I +M I PN IW SLL R HG +++ E+A + +I + P
Sbjct: 447 GCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAP 506
Query: 434 WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G Y+LLSN+YA G W+ +R M + +K PG S +E
Sbjct: 507 ETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVE 550
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 247/426 (57%), Gaps = 6/426 (1%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN-LGIWPDEYTFAPLLKACLGVG 114
+F++M + V+ +N MI Y E+ + +F ++ G+ PDE T L AC +
Sbjct: 194 LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALK 253
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L +G+ +H +R + I ++++Y CG + VF+EM ++VI M+
Sbjct: 254 RLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVS 312
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+ G++++ LF R VV W MI+ + R EA+ LF EM+ + + D+
Sbjct: 313 GYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFI 372
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
VV++L CA+ GA++ G+WIH + + + + V VG AL++ Y KCG ++ A +F +
Sbjct: 373 VVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAV-VGTALIEMYAKCGFIEKALEIFYGL 431
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
K+ SW ++I GLA NG+ +EL+ +M GV P+ TF+GVL+ C+H GLVE+ R
Sbjct: 432 RVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGR 491
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA---AIWGSLLSS 411
+ F SM + I P +EHYGC+VD+LGR+G + EA +LI+ + A ++GSLLS+
Sbjct: 492 KFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSA 551
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR +G+VE+ E K+L+ E +S + LL+NIYA RW+D +R M++ VKK+P
Sbjct: 552 CRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTP 611
Query: 472 GQSLIE 477
G S IE
Sbjct: 612 GCSSIE 617
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 214/457 (46%), Gaps = 75/457 (16%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-----GTLNEIKYATKI 56
++ + L + THL QIHA R LHQ + L ++ C G LN YA K+
Sbjct: 37 QQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLN---YAEKM 93
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
F +R P +L++N +IKA++ G + + LF+ L+ G+WPD +T+ + KA +G++
Sbjct: 94 FKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEV 153
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+ + G + ++G E +R ++++Y D +FDEM RDVI N+MI G+
Sbjct: 154 SKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGY 213
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
K + + +F M+E S LM DEATVV
Sbjct: 214 VKCRRFEDAINVFCRMQEES----GLMP--------------------------DEATVV 243
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
+ L C L +++G+ IH Y + + + +GNAL+D YCKCG L AR VF+E+P
Sbjct: 244 STLSACTALKRLELGKKIHHYVRDNVKFTPI--IGNALLDMYCKCGCLSIARAVFEEMPS 301
Query: 297 KNVVSWNAMISGLA-----------FNG--------------------RGELGVELYEQM 325
KNV+ W M+SG A F G R + V L+ +M
Sbjct: 302 KNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREM 361
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG-CMVDVLGRSG 384
+ V P+K V +LT CA G +E+ + + + + +P G ++++ + G
Sbjct: 362 QIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFID--ENRIPIDAVVGTALIEMYAKCG 419
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ +A ++ + ++ A+ W S++ +G A
Sbjct: 420 FIEKALEIFYGLRVKDTAS-WTSIICGLAMNGKTSKA 455
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L E A ++F V+++ +MI Y +E V LF ++ + PD++
Sbjct: 317 CGELEE---ARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIV 373
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
LL C G + G+ +H I + + ++E+Y CG ++ +++F +
Sbjct: 374 VSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRV 433
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+D +I G G K L LF +M++ V
Sbjct: 434 KDTASWTSIICGLAMNGKTSKALELFSKMKQAGV-------------------------- 467
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
D+ T + VL C+ G V+ G ++ +S + KV G LVD + G
Sbjct: 468 -----RPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYG-CLVDLLGRAG 521
Query: 283 ILDTARNVFKEIPRKN----VVSWNAMISGLAFNGRGELGVELYEQMI 326
+L+ A + K+IP +N V + +++S G E+G + +Q++
Sbjct: 522 LLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLV 569
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 242/431 (56%), Gaps = 38/431 (8%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL---GIWPDEYTFAPL 106
+ YA IF+ +P++ ++N++I+ YS+ S+ P+ AL K++ GI P+ YTF +
Sbjct: 17 VAYAHCIFSCTHHPNLFMWNTIIRGYSI---SDSPISAIALYKDMFLCGISPNSYTFGFV 73
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC + L GQ +H +I+++G + + G+++LY +CG MD +FDEM D
Sbjct: 74 LNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDS 133
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ M+ G+ + G + L L REM+ +V S
Sbjct: 134 ASWSTMVSGYSQNGQAVETLKLLREMQAENVSS--------------------------- 166
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
D T+ +V+ +C LG +D+G+W+HSY + G+ VV +G ALV Y KCG LD
Sbjct: 167 ----DAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVV-LGTALVGMYSKCGSLDN 221
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF+ + ++V +W+ MI+G A +G E ++L++ M + PN TF VL+ +H
Sbjct: 222 ALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSAYSH 281
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+GLVEK ++F +M + I P ++HYGCMVD+ R+G V A+ I++M I PN +W
Sbjct: 282 SGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWR 341
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
+LL +C+THG+ L EH ++++ L+P + NYV +SN+YA GRW +R M+E
Sbjct: 342 TLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMKEKA 401
Query: 467 VKKSPGQSLIE 477
KK G S IE
Sbjct: 402 PKKQHGWSSIE 412
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 147/341 (43%), Gaps = 48/341 (14%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
K+LRL G+ ++H+ ++ L +L + + + YA +F++M P
Sbjct: 79 KLLRLCEGQ-------ELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEP 131
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+++M+ YS NG + E +KL ++ + D +T A ++ C +G L +G+ VH
Sbjct: 132 DSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVH 191
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
I + G + + +V +Y+ CG +D+ +KVF M+ RDV ++MI G+ G +
Sbjct: 192 SYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDE 251
Query: 184 KGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
K L LF M+ + V++ ++S+ SG + ++F M T +
Sbjct: 252 KALQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMW---------TEYKIT 302
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKN 298
P G +VD +C+ G++ A + +P N
Sbjct: 303 PQIKHYG--------------------------CMVDLFCRAGMVGHAHKFIQTMPIEPN 336
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFV 338
VV W ++ +G LG + +++ SP FV
Sbjct: 337 VVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFV 377
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 262/501 (52%), Gaps = 36/501 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK---YATKIFNQMR 61
IL + T + Q HA L+ L + V+ T E K YA I N++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P+ NS+I+AY+ + E + +F + ++PD+Y+F +LKAC G+
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG I+SG + +V +Y G + KV D M RD + N ++ + +KG
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSG--------------RD-------------- 213
VD+ LF EM ER+V SWN MIS +G RD
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 214 ---SEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
+E L +F++M D + E D T+V+VL CA LG++ G+W+H Y + G+ +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF- 340
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
+ ALVD Y KCG +D A VF+ +++V +WN++IS L+ +G G+ +E++ +M+ +G
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
PN TF+GVL+ C H G++++AR+LF M+ ++ + P +EHYGCMVD+LGR G + EA
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
+L+ + + + SLL +C+ G +E AE L+ L +S Y +SN+YA
Sbjct: 461 EELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Query: 450 GRWDDAETLRMWMRENNVKKS 470
GRW+ R MR V +S
Sbjct: 521 GRWEKVIDGRRNMRAERVNRS 541
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 241/452 (53%), Gaps = 48/452 (10%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA------- 89
L S CG L K A +F+++ +V+ + SMI Y N ++ + LF
Sbjct: 2056 LIDMYSKCGQL---KDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 2112
Query: 90 -LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYT 146
+ + D +L AC V + + VHG +++ GF+ GSI +G +++ Y
Sbjct: 2113 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD--GSIGVGNTLMDAYA 2170
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
CGQ KVFD M +D I SWN MI+
Sbjct: 2171 KCGQPLVSKKVFDWMEEKDDI-------------------------------SWNSMIAV 2199
Query: 207 LGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+SG EAL +FH M R + T+ AVL CA GA+ G+ IH L
Sbjct: 2200 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 2259
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V VG +++D YCKCG ++ A+ F + KNV SW AM++G +GR + ++++ +M
Sbjct: 2260 NVC-VGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKM 2318
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+ GV PN TFV VL C+HAGLVE+ F +M + I P +EHYGCMVD+ GR+GC
Sbjct: 2319 VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGC 2378
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EAY+LI+ M ++P+ +WGSLL +CR H +V+L E A ++L L+P N G YVLLSN+
Sbjct: 2379 LNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNL 2438
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA+ GRW D E +RM M+ + K PG SL+E
Sbjct: 2439 YADAGRWADVERMRMLMKNRQLVKPPGFSLVE 2470
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 222/422 (52%), Gaps = 20/422 (4%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+K L LL HL QIHA +R L L+ + + T I YA +F Q++N
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN 87
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P +N +I+A ++NG SE+ + L+ + GI D++TF ++KAC + +G+ V
Sbjct: 88 PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVV 147
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +I+ GF ++ +++ Y CG +KVF++M R+V+ +I G GD+
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ +F E+ ++VVSW MI+ ++ + EAL LF M+ + +E T+V+++ C
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 243 ARLGAVDIGQWIHSYAESS----GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+G + +G+ IH YA + G+Y +G AL+D Y KCG + A VF+ +PRK+
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVY-----LGTALIDMYSKCGSIKDAIEVFETMPRKS 322
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+ +WN+MI+ L +G G+ + L+ +M V P+ TF+GVL C H V++ F
Sbjct: 323 LPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY-------DLIRSMSI----RPNAAIWGS 407
MT + I P EHY CM ++ RS + EA+ L S SI R W
Sbjct: 383 RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQ 442
Query: 408 LL 409
LL
Sbjct: 443 LL 444
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 201/460 (43%), Gaps = 76/460 (16%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
AT + + +V +NS+I + G S E ++ F+ L+ LG+ P +F +K+C
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G+ H + GFE + ++++Y+ CGQ+ D +FDE+ R+V+ M
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 2087
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELD 231
I G+ + D L LF++ E E+ D LD
Sbjct: 2088 ITGYVQNEQADNALLLFKDFLEEET------------------------EVEDGNNVPLD 2123
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+V+VL C+R+ I + +H + G + + VGN L+D Y KCG ++ VF
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVGNTLMDAYAKCGQPLVSKKVF 2182
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGL- 349
+ K+ +SWN+MI+ A +G +E++ M+ GV N T VL CAHAG
Sbjct: 2183 DWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGAL 2242
Query: 350 ----------------------------------VEKARELFASMTGLHSIVPNLEHYGC 375
VE A++ F M N++ +
Sbjct: 2243 RAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE-----KNVKSWTA 2297
Query: 376 MVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEH---AVKELI 429
MV G G +EA D+ M ++PN + S+L++C G VE H A+K
Sbjct: 2298 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 2357
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETL--RMWMRENNV 467
++EP +Y + +++ G ++A L RM M+ + V
Sbjct: 2358 DIEP-GIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 54/330 (16%)
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+ ++ + + +V SWN +I+ L + G EALR F +R ++ + C+ L
Sbjct: 1970 WFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALC 2029
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+ G+ H A G + + V +AL+D Y KCG L AR +F EIP +NVVSW +MI
Sbjct: 2030 DLVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMI 2088
Query: 307 SGLAFNGRGELGVELYEQMIAK--------GVSPNKATFVGVLTCCA-----------HA 347
+G N + + + L++ + + V + V VL+ C+ H
Sbjct: 2089 TGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHG 2148
Query: 348 GLVEK------------------------ARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+V+K ++++F M I + M+ V +S
Sbjct: 2149 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDI-----SWNSMIAVYAQS 2203
Query: 384 GCVREAYD----LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGN 438
G EA + ++R + +R NA ++L +C G + + ++I ++ +N
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 2263
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
+ ++Y + GR + A+ M+E NVK
Sbjct: 2264 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ L + + + + ++ A K F++M+ +V + +M+ Y ++G
Sbjct: 2248 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 2307
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGFERFG 135
++E + +F + G+ P+ TF +L AC G + G H I G E +G
Sbjct: 2308 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 2367
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK-KGDVDKGLYLFREMRE 194
+ V+L+ G +++ + M + V + G C+ +VD G +++ E
Sbjct: 2368 CM----VDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 2423
Query: 195 RSV--VSWNLMISSL-GKSGR--DSEALRLFHEMR 224
+ +++S+L +GR D E +R+ + R
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 241/458 (52%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH ++ + + +S+ + A +F ++ +V+ +N+MI AY +
Sbjct: 428 QIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHE 487
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ V F L GI PD TF +L C L +G+ V IIR+GFE
Sbjct: 488 KYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFES------ 541
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
D+ +RN ++ F GD+ + LF +M ER +VS
Sbjct: 542 -------------------------DLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVS 576
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +I+ + G + A F M++ + D+ T +L CA A+ G+ +H+
Sbjct: 577 WNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALIT 636
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ L VV VG L+ Y KCG +D A VF +P+KNV SW +MI+G A +GRG+ +
Sbjct: 637 EAALDCDVV-VGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEAL 695
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
EL+ QM +GV P+ TFVG L+ CAHAGL+++ F SM +I P +EHYGCMVD+
Sbjct: 696 ELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDF-NIEPRMEHYGCMVDL 754
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + EA + I M ++P++ +WG+LL +C+ H VELAE ++ + L+P + G Y
Sbjct: 755 FGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVY 814
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIYA G W + +R M + V K PGQS IE
Sbjct: 815 VILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 202/447 (45%), Gaps = 42/447 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH H K+ + +S+ A +IF++M + V +N ++ Y +
Sbjct: 125 RIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHR 184
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +L + G+ PD+YTF +L AC ++ G + I+ +G++ +
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ ++ CG +DD +KVF+ + RD+I MI G + + LF+ M E V
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV-- 302
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+ D+ V++L C A++ G+ +H+ +
Sbjct: 303 -----------------------------QPDKVAFVSLLKACNHPEALEQGKRVHARMK 333
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
GL ++ VG AL+ Y KCG ++ A VF + +NVVSW AMI+G A +GR E
Sbjct: 334 EVGLDTEIY-VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAF 392
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ +MI G+ PN+ TF+ +L C+ +++ R++ + I + ++ +
Sbjct: 393 LFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTA-LLSM 451
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSG 437
+ G + +A ++ +S + N W +++++ H + A + L+ ++P +S
Sbjct: 452 YAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP-DSS 509
Query: 438 NYVLLSNIYA-----EGGRWDDAETLR 459
+ + N+ E G+W + +R
Sbjct: 510 TFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 137/290 (47%), Gaps = 37/290 (12%)
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N ++ L K+G+ SEA+ + + ++ T ++L +C + + G+ IH++ +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
S + + + N L+ Y KCG ++A+ +F E+P K+V SWN ++ G + R E
Sbjct: 133 SKIQPDIF-MWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFR 191
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA---------------SMTGLH- 364
L+EQM+ GV P+K TFV +L CA A V+K ELF+ ++ +H
Sbjct: 192 LHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHI 251
Query: 365 ---------SIVPNLEH-----YGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGS 407
+ NL + M+ L R ++A +L + M ++P+ + S
Sbjct: 252 KCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVS 311
Query: 408 LLSSCRTHGHVELAE--HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
LL +C +E + HA + + L+ LLS +Y + G +DA
Sbjct: 312 LLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS-MYTKCGSMEDA 360
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 232/425 (54%), Gaps = 31/425 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A FN+M + ++ +NS+I Y+ G + +F L+ I PD T ++ AC
Sbjct: 484 ALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACAL 543
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G C+HG I++ GFE ++ ++++Y CG + +F+
Sbjct: 544 LNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFN------------- 590
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
K D K V+WN++I++ ++G EA+ FH+MR + F +
Sbjct: 591 ------KTDFTK-----------DEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNS 633
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T V+VLP A L A G H+ G + VGN+L+D Y KCG L + +F
Sbjct: 634 VTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTL-VGNSLIDMYAKCGQLXYSEKLFN 692
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
E+ K+ VSWNAM+SG A +G G+ + L+ M V + +FV VL+ C H GLVE+
Sbjct: 693 EMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEE 752
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
R++F SM+ + I P+LEHY CMVD+LGR+G E I+ M + P+A +WG+LL SC
Sbjct: 753 GRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSC 812
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R H +V+L E A+ L+ LEP N ++V+LS+IYA+ GRW DA R M + +KK+PG
Sbjct: 813 RMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872
Query: 473 QSLIE 477
S +E
Sbjct: 873 CSWVE 877
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 198/448 (44%), Gaps = 86/448 (19%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRH--KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
RLL L QIHA + K H S + H +++ ++ A +F+ NPS
Sbjct: 37 RLLSSCKHLNPLLQIHAQIIVSGFKHHHS---ITHLINLYSLFHKCDLARSVFDSTPNPS 93
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+L+NSMI+AY+ + E ++++ + G+ PD+YTF +LKAC G +L+ G HG
Sbjct: 94 RILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHG 153
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
EI R G ER I G+V++Y+ G + +VFD+M RDV+ N MI G
Sbjct: 154 EIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG--------- 204
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
L +S EA+ F M+ E +++ + P +
Sbjct: 205 ----------------------LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICK 242
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVS--VGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
L +++ + IH Y ++R+ S V N L+D Y KCG +D AR VF ++ ++ VSW
Sbjct: 243 LSNIELCRSIHGY-----VFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSW 297
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA--------------- 347
M++G A NG +EL+++M V NK + V A
Sbjct: 298 GTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ 357
Query: 348 --------------------GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
G EKA++LF + G +L + ++ L ++G
Sbjct: 358 QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG-----RDLVAWSAIIAALVQTGYPE 412
Query: 388 EAYDLIRSMS---IRPNAAIWGSLLSSC 412
EA L + M ++PN S+L +C
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPAC 440
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 179/403 (44%), Gaps = 35/403 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH L+ ++ L+ + + E + A ++F ++ ++ ++++I A G
Sbjct: 350 EIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTG 409
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE + LF ++N + P+ T +L AC + L++G+ +H +++ + S
Sbjct: 410 YPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT 469
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V +Y CG + F+ MS RD++ N +I+G+ + GD
Sbjct: 470 ALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD-----------------P 512
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N A+ +F+++R A D T+V V+P CA L +D G IH
Sbjct: 513 YN--------------AIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
G + V NAL+D Y KCG L +A +F + K+ V+WN +I+ NG +
Sbjct: 559 KLG-FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA 617
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ + QM + PN TFV VL A+ + A + + + N ++D
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLID 676
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + G + + L M + + W ++LS HGH + A
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRA 718
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 181/412 (43%), Gaps = 51/412 (12%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG ++ A ++F+QM + + + +M+ Y+ NG E ++LF +K +
Sbjct: 269 LIDLYSKCG---DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
++ + A DL G+ +HG ++ + + ++ +Y CG+ + +
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+F + RD++ + +I + G ++ L LF+
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ-------------------------- 419
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
EM++Q + + T++++LP CA L + +G+ IH + + + +S G ALV
Sbjct: 420 -----EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD-LSTGTALVS 473
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG A F + +++V+WN++I+G A G ++++ ++ ++P+ T
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGT 533
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH------YGCMVDVLGRSGCVREAY 390
VGV+ CA +++ T +H ++ L ++D+ + G + A
Sbjct: 534 MVGVVPACALLNDLDQG-------TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAE 586
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE--LINLEPWNSGNYV 440
L + W ++++ +GH + A + + L N P NS +V
Sbjct: 587 FLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHP-NSVTFV 637
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 44 CGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
CG+L ++ +FN+ + +N +I AY NG ++E + F ++ P+ T
Sbjct: 579 CGSLPSAEF---LFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
F +L A + R G H II+ GF + ++++Y CGQ+ K+F+EM
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD 695
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALR 218
H+D + N M+ G+ G D+ + LF M+E V VS+ ++S+ G E +
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRK 755
Query: 219 LFHEMRDQ 226
+FH M D+
Sbjct: 756 IFHSMSDK 763
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/380 (41%), Positives = 220/380 (57%), Gaps = 32/380 (8%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PBE T A +L C +GDL +G +RI + + G
Sbjct: 4 PBEITLATVLSICAKLGDLEMG-----------------LRIKKLXDNKNLGS------- 39
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
++IV M+ + K G VD G +F M R VV W+ MI+ ++GR +EAL
Sbjct: 40 -------NMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVXWSAMIAGYAQNGRSNEAL 92
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
LF M+ + ++ T+V+VL CA+LG+V+ G+ I SY ES GL V V +AL+
Sbjct: 93 ELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVY-VASALLGM 151
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG + AR +F ++P+++ V+WN+MI GLA NG E + LY +M V PN TF
Sbjct: 152 YSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITF 211
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
VG+LT C HAG VE E F SM H+I PN+EH+ C+VD+ RSG + +AY+ I M
Sbjct: 212 VGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME 271
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ PN IWG+LLS+ R H +VELAE A K+L+ LEP NSGNYV+LSNIYA RW +A
Sbjct: 272 VEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASASRWQEALK 331
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R M++ V+K+ S +E
Sbjct: 332 VRKLMKDKRVQKAAAYSWVE 351
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 48/268 (17%)
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E BE T+ VL ICA+LG +++G I ++ L ++ V A+++ Y KCG +D R
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMI-VSTAMLEMYVKCGAVDDGR 61
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF + R++VV W+AMI+G A NGR +EL+E M + + PN T V VL+ CA G
Sbjct: 62 LVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLG 121
Query: 349 LVE-----------------------------------KARELFASMTGLHSIVPNLEHY 373
VE KAR++F + ++ N
Sbjct: 122 SVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWN---- 177
Query: 374 GCMVDVLGRSGCVREA---YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI- 429
M+ L +G +A Y+ ++ + ++PN + LL++C GHVEL + +
Sbjct: 178 -SMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRS 236
Query: 430 --NLEPWNSGNYVLLSNIYAEGGRWDDA 455
N+ P N ++ + +++ GR DA
Sbjct: 237 DHNISP-NIEHFACIVDLFCRSGRLIDA 263
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 122/292 (41%), Gaps = 40/292 (13%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
S +L +V CG +++ + +F+ M V+ +++MI Y+ NG S E ++LF +K
Sbjct: 44 STAMLEMYVK-CGAVDDGRL---VFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMK 99
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+ I P++ T +L AC +G + G+ + + G + ++ +Y+ CG +
Sbjct: 100 SAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNII 159
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
++FD++ RD + N MI G G + + L+ M+E V N+
Sbjct: 160 KARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNI---------- 209
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
T V +L C G V++G S +
Sbjct: 210 ---------------------TFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFA 248
Query: 273 ALVDFYCKCG-ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+VD +C+ G ++D + + NVV W ++S R L VEL E
Sbjct: 249 CIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSA----SRIHLNVELAE 296
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 260/493 (52%), Gaps = 24/493 (4%)
Query: 3 RKILR----LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN 58
R +LR LL +HL +HAH + S LA F++ + N + YA +
Sbjct: 1208 RPLLRDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSNHLSYARLVLP 1267
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q R ++L N+ I+A + GP P FA ++L + PD Y+ L++A +
Sbjct: 1268 Q-RPATLLAHNAFIRALA-RGP--RPCLAFAAFRDLPLPPDHYSLNFLVRAATALVASAA 1323
Query: 119 GQ--------------CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+ HG +R G ++ GV+ +Y + G + F E++
Sbjct: 1324 EEKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACP 1383
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ M+ GDVD LF M +R V+W+ MI+ GR EAL LF EM
Sbjct: 1384 DVVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEML 1443
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ EAT+V+VL CA++G +D G+W+H Y S G+ + + +G ALVD Y KCG +
Sbjct: 1444 SAGTTVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGM-QMSIKLGTALVDMYSKCGAV 1502
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
TA VF+ + +NV +W + +SGLA NG G ++L+++M G+ PN +FV VL C
Sbjct: 1503 VTAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGC 1562
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+ AGLV++ R F SM + + P EHYGCMVD+ GR+G + +A I M + P+ +
Sbjct: 1563 SMAGLVDEGRACFDSMDK-YGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGV 1621
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL++ R H V+L ++A+ +L+ +E N +V LSNIYAE W +R M+
Sbjct: 1622 WGALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKA 1681
Query: 465 NNVKKSPGQSLIE 477
VKK PG S IE
Sbjct: 1682 KGVKKVPGWSTIE 1694
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 260/458 (56%), Gaps = 39/458 (8%)
Query: 22 HAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
A +L + + N+I V+ + +++ A + F+ M SV+ +N+M+ Y+ NG
Sbjct: 181 QAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGL 240
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+EE ++LF + N GI PDE T+ ++ AC GD C+ ++R+ ++ RI
Sbjct: 241 AEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD----PCLAASLVRTLHQK----RIQ 292
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ + VR ++ + K GD+D LF M R+VV+W
Sbjct: 293 L-----------------------NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTW 329
Query: 201 NLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
N MI+ ++G+ + A+ LF EM + DE T+V+V+ C LGA+++G W+ +
Sbjct: 330 NSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLT 389
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + + +S NA++ Y +CG ++ A+ VF+E+ ++VVS+N +ISG A +G G +
Sbjct: 390 ENQI-KLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAI 448
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L M G+ P++ TF+GVLT C+HAGL+E+ R++F S+ P ++HY CMVD+
Sbjct: 449 NLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDL 503
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR G + +A + M + P+A ++GSLL++ R H VEL E A +L LEP NSGN+
Sbjct: 504 LGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNF 563
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LLSNIYA GRW D E +R M++ VKK+ G S +E
Sbjct: 564 ILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVE 601
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 214/440 (48%), Gaps = 51/440 (11%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKI-FNQMRNPSVLLFNSMIKAY 75
HL Q+HA + + LH N +A ++ C L + T + FN NP+V +F SM++ Y
Sbjct: 16 HLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFY 75
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S + V ++ ++ G+ PD + + P+L G G G H +++ G
Sbjct: 76 SHLQDHAKVVLMYEQMQGCGVRPDAFVY-PILIKSAGTG----GIGFHAHVLKLGHGSDA 130
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDE---------------------------------MS 162
+R V+++Y G + KVFDE M
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
R+VI M+ G+ K D++ F M ERSVVSWN M+S ++G EALRLF E
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250
Query: 223 MRDQAFELDEATVVAVLPICARLG----AVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
M + E DE T V V+ C+ G A + + +H + V AL+D Y
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCF-----VRTALLDMY 305
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATF 337
K G LD+AR +F +P +NVV+WN+MI+G A NG+ + +EL+++MI AK ++P++ T
Sbjct: 306 AKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTM 365
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
V V++ C H G +E + +T + I ++ + M+ + R G + +A + + M+
Sbjct: 366 VSVISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMA 424
Query: 398 IRPNAAIWGSLLSSCRTHGH 417
R + + +L+S HGH
Sbjct: 425 TR-DVVSYNTLISGFAAHGH 443
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 246/458 (53%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH+ ++ + +S+ IK A +FN+M ++ + +MI + +G
Sbjct: 467 EIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSG 526
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + +F ++ G+ P+ T+ +L AC L G+ +H ++I +G +
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V +Y+ CG + D +VFD M +R +V+
Sbjct: 587 TLVNMYSMCGSVKDARQVFDR-------------------------------MTQRDIVA 615
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N MI EAL+LF ++++ + D+ T + +L CA G+++ + IHS
Sbjct: 616 YNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVL 675
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G Y S+GNALV Y KCG A VF ++ ++NV+SWNA+I G A +GRG+ +
Sbjct: 676 KDG-YLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVL 734
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+E+M +G+ P+ TFV +L+ C+HAGL+E+ R F SM+ I P +EHYGCMVD+
Sbjct: 735 QLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDL 794
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G + E LI++M + N IWG+LL +CR HG+V +AE A + + L+P N+ Y
Sbjct: 795 LGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVY 854
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V LS++YA G WD A LR M + V K PG+S IE
Sbjct: 855 VALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIE 892
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 196/400 (49%), Gaps = 42/400 (10%)
Query: 21 IHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+H+H L + H+S+L L + CG+ + + ++F ++ N ++ +N+MI +
Sbjct: 367 VHSHIL-NAGHESDLAVGTALVKMYAKCGSYKDCR---QVFEKLVNRDLIAWNTMIGGLA 422
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G EE +++ ++ G+ P++ T+ LL AC+ L G+ +H +++ GF S
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ ++ +Y CG + D +F++M +D+I MI G K
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAK------------------ 524
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SG +EAL +F +M+ + + T ++L C+ A+D G+ IH
Sbjct: 525 -------------SGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQ 571
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+GL V N LV+ Y CG + AR VF + ++++V++NAMI G A + G+
Sbjct: 572 QVIEAGLATD-AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGK 630
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
++L++++ +G+ P+K T++ +L CA++G +E A+E+ S+ + + +
Sbjct: 631 EALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIH-SLVLKDGYLSDTSLGNAL 689
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
V + G +A + M ++ N W +++ C HG
Sbjct: 690 VSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHG 728
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 226/489 (46%), Gaps = 80/489 (16%)
Query: 20 QIHAHFLRHKL----HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+IH ++ +L + +N IL + CG+++E A ++F++M SV+ + +I Y
Sbjct: 265 EIHVEAMKARLLFDVNVANCILNMYAK-CGSIHE---AREVFDKMETKSVVSWTIIIGGY 320
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ G SE ++F ++ G+ P+ T+ +L A G L+ G+ VH I+ +G E
Sbjct: 321 ADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDL 380
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
++ +V++Y CG D +VF+++ +RD+I N MI G + G+
Sbjct: 381 AVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN-------------- 426
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
W EA ++H+M+ + ++ T V +L C A+ G+ IH
Sbjct: 427 ----W-------------EEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
S G +SV NAL+ Y +CG + AR +F ++ RK+++SW AMI GLA +G G
Sbjct: 470 SRVVKDGFMFD-ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLG 528
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCA----------------HAGL---------- 349
+ +++ M G+ PN+ T+ +L C+ AGL
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTL 588
Query: 350 ---------VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
V+ AR++F MT + N G LG+ + +D ++ ++P
Sbjct: 589 VNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEAL--KLFDRLQEEGLKP 646
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETL 458
+ + ++L++C G +E A+ + L+ + + S + L + YA+ G + DA +
Sbjct: 647 DKVTYINMLNACANSGSLEWAKE-IHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLV 705
Query: 459 RMWMRENNV 467
M + NV
Sbjct: 706 FDKMMKRNV 714
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 43/317 (13%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS----------EEPV 85
+ A+ S+ + + +K+ + FN + + FN KA L+ + + +
Sbjct: 70 VEANCSSLMHSQSRVKFLKRWFN---SNGIRYFNGRSKANKLHSHTYKDERTITGKDRAM 126
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELY 145
+ L+ G + + +LK C+ V DL G+ VH II+ ++ +Y
Sbjct: 127 DVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMY 186
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
CG +++ +V+++++H ER+V SWN M+
Sbjct: 187 IQCGSIEEARQVWNKLNHT-----------------------------ERTVHSWNAMVV 217
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+ G EAL+L EM+ L AT + +L C A++ G+ IH A + L
Sbjct: 218 GYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLF 277
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V+V N +++ Y KCG + AR VF ++ K+VVSW +I G A G E+ E++++M
Sbjct: 278 D-VNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKM 336
Query: 326 IAKGVSPNKATFVGVLT 342
+GV PN+ T++ VL
Sbjct: 337 QQEGVVPNRITYINVLN 353
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 186/549 (33%), Positives = 267/549 (48%), Gaps = 82/549 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHA------HFLRHKLHQSNLILAHFVSV--CGTLNEIKYATKI 56
+L L + +H Q HA H L SN +L SV L ++ +A
Sbjct: 13 LLSRLRACRSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARLP 72
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKL--FALLKNLGIWPDEYTFAPLLKACLGVG 114
R+P +N+ I+ L+ P+ L FA ++ G+ PD YTF +LKAC
Sbjct: 73 LPAARDP--FAWNTAIR---LHAPARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAP 127
Query: 115 DLRVGQCVHGEIIRSGFE--------------RFGSIRIG-------------------V 141
R G VH E +R G R IR G +
Sbjct: 128 GCRAGLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSM 187
Query: 142 VELYTSCGQM---------------------------------DDGMKVFDEMSHRDVIV 168
V Y CG+M D ++FD+M RD++
Sbjct: 188 VAGYVGCGEMGLAQEMFDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVC 247
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MI G+ + G +D+ LF EM ER+V+SW+++I G EAL F M
Sbjct: 248 WNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGL 307
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
D V + CA+LGA++ G+W+HSY E L VV V AL+D Y KCG LD A
Sbjct: 308 RPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVV-VQTALIDMYVKCGCLDLAM 366
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+F+ + ++VV+WN MI GL +G G V L+ +M A+ V+ + + +G+LT C HAG
Sbjct: 367 LIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAG 426
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV + E+F M I P +EHYG +VD+LGR+G + +A I +M + P +WGSL
Sbjct: 427 LVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSL 486
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L++CR+H VELAE +V+ L +L +SG YVLLSNIYA+ G W D +R M + ++
Sbjct: 487 LAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMR 546
Query: 469 KSPGQSLIE 477
K G+S+IE
Sbjct: 547 KDIGRSVIE 555
>gi|357117491|ref|XP_003560501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Brachypodium distachyon]
Length = 652
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 251/475 (52%), Gaps = 17/475 (3%)
Query: 17 HLTQIHAHFLRHKLHQSNL------ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
HL +HA +R L +L +L ++ + YA +F + P L +
Sbjct: 52 HLRHLHALLIRLPLPPRSLPFILSRLLRRLAALPPPHAPLPYALSVFAALSPPDPFLAAA 111
Query: 71 MIKAYSLNGPSEEPVKLFALL------KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+++ L P P LF+ + L P + F+PL K+ L Q H
Sbjct: 112 LLRFALLTQPPLSPFHLFSRILRTARGGELPFLP--FAFSPLAKSAAAARSLPAAQAAHA 169
Query: 125 -EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+ GF++ + ++ Y +CG + KVFDEM +DVI ++ + + D+
Sbjct: 170 VSFLVGGFDKHRFVENSLIGAYIACGDVGAARKVFDEMVVKDVICWTSIVVAYSRSRDMG 229
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+F + + +V+W M++ ++ +AL +F M +DE ++ + CA
Sbjct: 230 SAEEVFGQCPVKDMVAWTAMVTGYAQNAMPMKALEVFDRMTALGIGIDEVSLTGAISACA 289
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+LGAV W+ AE +G VV VG+ LVD Y KCG++D A VF + KNV +++
Sbjct: 290 QLGAVKRAAWVQEIAEMNGFGMNVV-VGSGLVDMYAKCGLIDEACKVFDGMQEKNVYTYS 348
Query: 304 AMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+M+ GLA +GR + L++ M+ + V+PN TF+GVLT C+HAG+V R FA M
Sbjct: 349 SMVVGLASHGRAREAIALFKDMVRRADVAPNHVTFIGVLTACSHAGMVTDGRYYFAQMKD 408
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I+P+ +HY CMVD+LGR+G V EA DL+RSM++ P+ +WG+LL +CR HG E+A+
Sbjct: 409 KYGILPSADHYTCMVDLLGRAGLVDEALDLVRSMTVEPHGGVWGALLGACRIHGKTEVAK 468
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A + L LEP GNYVLLSN A G+WD+ +R MR +KK P S E
Sbjct: 469 VAAEHLFKLEPEGIGNYVLLSNTLAAAGKWDEVSKVRKVMRSRRLKKVPAVSWFE 523
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 259/457 (56%), Gaps = 3/457 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IHA + + +S+ + + +++ ++ A + F +++N V+ + S++ AY G
Sbjct: 77 IHARIVSSNM-ESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGH 135
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E + L+ + + G+ D T+ L AC +G L+ G+ +H + GF+ +
Sbjct: 136 YREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSL-VVHTA 194
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ +Y CG++D VF+ ++ +V V+N ++ + K G ++ F + +VSW
Sbjct: 195 LLTMYAKCGELDAARAVFNRLA-SNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSW 253
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N MI + + G EAL L+ M Q DE T+ + L CA G++ +G+ IHS
Sbjct: 254 NAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLK 313
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ ++ + V ALV+ Y +CG L+TAR++F+++ +++V+SW AM S A G + ++
Sbjct: 314 NQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLD 373
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
LY +M+ G+ PN+ TF +L C+HAGL+ + E F M H +VP EH+ CMVD+L
Sbjct: 374 LYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLL 433
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GRSG +R+A L+ SM +P++ W ++L SC+TH + A+ A + + L+P N+ Y
Sbjct: 434 GRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYS 493
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLS+I+ G +A +++ M+E +KK PGQSLIE
Sbjct: 494 LLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 181/406 (44%), Gaps = 71/406 (17%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG++ E A K+F+ ++N + + SMI +Y+ NG +E + L+ + GI PD TF
Sbjct: 5 CGSVEE---ARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFER--FGSIRIGVVELYTSCGQMDDGMKVFDEM 161
L AC + D G+ +H I+ S E GS ++ +Y CG
Sbjct: 62 TSALLACTKLAD---GKAIHARIVSSNMESDFVGS---ALINMYARCG------------ 103
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
DV F +++ + VV W ++++ ++G EAL L+
Sbjct: 104 -------------------DVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYG 144
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG------------LYRKV-- 267
M + D T V L CA LGA+ G+ IH G +Y K
Sbjct: 145 RMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLVVHTALLTMYAKCGE 204
Query: 268 --------------VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
V+V NALV Y KCG L+ A++ F+ RK++VSWNAMI A +G
Sbjct: 205 LDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHG 264
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
G ++LY+ M ++GV P++ T L+ CA +G ++ RE+ + + S +L
Sbjct: 265 LGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQ 324
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+V++ GR G + A + M R + W ++ S GH +
Sbjct: 325 TALVNMYGRCGRLETARSMFEDMGQR-DVLSWTAMTSVYAQQGHAD 369
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G V++ +F ++ R VSW MISS +G EAL L+ +M + D T
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ L C +L G+ IH+ SS + VG+AL++ Y +CG + +AR F++I
Sbjct: 62 TSALLACTKLAD---GKAIHARIVSSNMESDF--VGSALINMYARCGDVSSARQAFEKIQ 116
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE--KA 353
K+VV W ++++ G ++LY +M +GV + T+V L CA G ++ KA
Sbjct: 117 NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKA 176
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
L S G S+V + ++ + + G + A + ++ N A+ +L++
Sbjct: 177 IHLRVSECGFQSLVV----HTALLTMYAKCGELDAARAVFNRLA--SNVAVQNALVTMYA 230
Query: 414 THGHVELAEHAVKE--LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
G +ELA+ A + +L WN+ + YA+ G +A L M V
Sbjct: 231 KCGSLELAKSAFEASGRKDLVSWNA-----MIGAYAQHGLGREALDLYQTMTSQGV 281
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 252/468 (53%), Gaps = 26/468 (5%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+H H ++ I V + CG L++ A ++F+++ L+N+MI AY
Sbjct: 125 QVHVHVFKNGFQTDERIATTLVDLYARCGRLDD---ARRVFDRLLVKDAQLYNTMIAAYM 181
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G E +LF ++ + +T ++ GD+ + V FE
Sbjct: 182 EAGEVELAEELFEVMPE----RNTHTLMEMVGGYSARGDMDSAKHV--------FEMANG 229
Query: 137 IR-----IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH-GFCKKGDVDKGLYLFR 190
+ ++ + G +DD VFD M RDV N+MI + K G V+ +F
Sbjct: 230 VVNMVLCTAMISGFAKTGSVDDARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFD 289
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
M ER+VV W MIS + G+ +A++LF +M+ + D+AT+ V+ C ++GA+D+
Sbjct: 290 AMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDL 349
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+++H+Y + GL K +SV N+L+D Y KCG + A +F+ + +++ SW MI G A
Sbjct: 350 GRYVHAYCDVHGL-GKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFA 408
Query: 311 FNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
NG ++L+ QM +G V PN+ TF+GVLT C+H GLVE+ F M+ ++ I P
Sbjct: 409 VNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPR 468
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGCMVD+LGR+ + EA I M I P+ AIW SLL +CR G V LAE+ + +
Sbjct: 469 IEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVAERVE 528
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LEP G VLLSN+YA RW D +R M + V K PG S+IE
Sbjct: 529 ELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIE 576
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 164/327 (50%), Gaps = 12/327 (3%)
Query: 78 NGPSEEPVKLFALLKN--LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ + + V L+A + G+ P +T + +LKA LR G+ VH + ++GF+
Sbjct: 80 SAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDE 139
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
I +V+LY CG++DD +VFD + +D + N MI + + G+V+ LF M ER
Sbjct: 140 RIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPER 199
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ + M+ G A +F EM + + T A++ A+ G+VD + +
Sbjct: 200 NTHTLMEMVGGYSARGDMDSAKHVF-EMANGVVNMVLCT--AMISGFAKTGSVDDARSVF 256
Query: 256 SYAESSGLYRKVVSVGNALVD-FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
G+ ++ V+ N ++ Y KCG+++ AR VF +P +NVV W +MISG G+
Sbjct: 257 -----DGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGK 311
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ V+L+ M GV + AT V++ C G ++ R + A +H + +
Sbjct: 312 FKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHA-YCDVHGLGKGISVKN 370
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPN 401
++D+ + G +++A+++ R + R +
Sbjct: 371 SLIDMYSKCGDIKKAHEIFRGLVKRDD 397
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 242/430 (56%), Gaps = 4/430 (0%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLK 108
++ A +F+ + + +M+ + N E + +F+ ++ G WP DE ++
Sbjct: 219 VEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEG-WPVDEAVMVSVVA 277
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC G ++ G+ HG ++R+G +++ ++ +Y+SC + ++FD D
Sbjct: 278 ACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFS 337
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MI G+ K G V+ LF M ++ VSW+ MI+ + + SEAL +F MR
Sbjct: 338 WNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEI 397
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D+ T+V+V+ C+ L A++ G+ +H Y Y + +G +L+D Y KCG ++ A
Sbjct: 398 KPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQ-YNITIVLGTSLIDMYMKCGCMEAAL 456
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS-PNKATFVGVLTCCAHA 347
VF + K WNA+I GLA NG ++++ +M A G + PN+ TF GVL+ C H
Sbjct: 457 EVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHG 516
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLVE+ R+ F M + IVPN+ HYGCMVD+LGR+G VREA D+I+SM + P+ WG+
Sbjct: 517 GLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGA 576
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL +C HG E+ E K+L+ L+P + G +LSNIYA G W + LR M++ +V
Sbjct: 577 LLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHV 636
Query: 468 KKSPGQSLIE 477
K G S++E
Sbjct: 637 AKVAGCSMVE 646
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 213/517 (41%), Gaps = 107/517 (20%)
Query: 17 HLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPSVLLFN 69
HL QIHA FL L S L+L + L + + ++ ++F +R+P+ N
Sbjct: 19 HLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLFGLVRSPNAFTCN 78
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+++KA G P F L ++ PD YT L AC GD+R G VH ++
Sbjct: 79 TLLKAALRQG---FPHLCFPLYASMPAAPDTYTHPLLAAACAARGDVREGLQVHSHSVKH 135
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
GF +R ++ +Y++CG + +VFD D + N ++ + + GDV++ + +F
Sbjct: 136 GFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVF 195
Query: 190 REMRER-------------------------------SVVSWNLMISSLGKSGRDSEALR 218
M ER +W M+S ++ EAL
Sbjct: 196 TRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALA 255
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
+F +MR++ + +DEA +V+V+ CA+ G + G+ H +GL + V+V N L+ Y
Sbjct: 256 VFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSR-VNVQNVLIHMY 314
Query: 279 CKC-------------------------------GILDTARNVFKEIPRKNVVSWNAMIS 307
C G ++ A+ +F +P K+ VSW+AMI+
Sbjct: 315 SSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIA 374
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH--- 364
G N + + +++ M A + P+ T V V++ C++ +E+ + + +
Sbjct: 375 GCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNI 434
Query: 365 ------SIVPNLEHYGCM---------------------VDVLGRSGCVREAYDLIRSM- 396
S++ GCM + L +G V + D+ M
Sbjct: 435 TIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEME 494
Query: 397 ---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+ PN + +LS+CR G VE K + N
Sbjct: 495 ATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQN 531
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 244/462 (52%), Gaps = 33/462 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR--NPSVLLFNSMIKAY 75
L +HA +R + + ++S G ++ A +F + + +V+ +NSM KAY
Sbjct: 172 LEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY 231
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S+ G + + L+ L+ PD TF L +C L G+ +H I G
Sbjct: 232 SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG----- 286
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +D+ N I + K D LF M R
Sbjct: 287 --------------------------TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ VSW +MIS + G EAL LFH M + D T+++++ C + G+++ G+WI
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ A+ G R V + NAL+D Y KCG + AR++F P K VV+W MI+G A NG
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+ +MI PN TF+ VL CAH+G +EK E F M +++I P L+HY C
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC 500
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR G + EA +LIR+MS +P+A IWG+LL++C+ H +V++AE A + L NLEP
Sbjct: 501 MVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQM 560
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ YV ++NIYA G WD +R M++ N+KK PG+S+I+
Sbjct: 561 AAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQ 602
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+A + N P E + LF +K G P+ +TF + KAC + D+ + VH +I+S F
Sbjct: 26 EAVNRNDPVES-LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW 84
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ V+++ C +D KVF+ M RD N M+ GFC+ G DK LFREM
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R + ++ + +L +S ++L+L M + RLG VD+
Sbjct: 145 RLNEITPDSVTVMTLIQSASFEKSLKLLEAMH---------------AVGIRLG-VDVQ- 187
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLA 310
V+V N + Y KCG LD+A+ VF+ I R + VVSWN+M +
Sbjct: 188 ---------------VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
G LY M+ + P+ +TF+ + C + + + R
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 174/412 (42%), Gaps = 31/412 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + V + N + YA K+F +M +N+M+ + +G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+++ LF ++ I PD T L+++ L++ + +H IR G + ++
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y CG +D VF+ +D+G +R+VVSW
Sbjct: 194 WISTYGKCGDLDSAKLVFEA---------------------IDRG--------DRTVVSW 224
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N M + G +A L+ M + F+ D +T + + C + G+ IHS+A
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G + + ++ N + Y K +AR +F + + VSW MISG A G + +
Sbjct: 285 LGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ MI G P+ T + +++ C G +E + + A N+ ++D+
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
+ G + EA D+ + + W ++++ +G A ++I+L+
Sbjct: 404 SKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
L+R SV +WNL I E+L LF EM+ FE + T V CARL
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
V + +H++ S + V VG A VD + KC +D A VF+ +P ++ +WNAM+S
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVF-VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
G +G + L+ +M ++P+ T V+T A EK+ +L +M
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVT---VMTLIQSASF-EKSLKLLEAM 175
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 177/452 (39%), Gaps = 92/452 (20%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
T T IH+H + Q + F+S+ + A +F+ M + + + + MI
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
Y+ G +E + LF + G PD T L+ C G L G+ + G +R
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR 390
Query: 134 FGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ I ++++Y+ CG + + +FD + V+ MI G+ G++L
Sbjct: 391 -DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL-----NGIFL--- 441
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
EAL+LF +M D ++ + T +AVL CA G+++ G
Sbjct: 442 -----------------------EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 252 -QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
++ H + ++V ++ L + C M+ L
Sbjct: 479 WEYFH-------IMKQVYNISPGLDHYSC-------------------------MVDLLG 506
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA---HAGLVEKARELFASMTGLHSIV 367
G+ E +EL M AK P+ + +L C + + E+A E L ++
Sbjct: 507 RKGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIAEQAAE------SLFNLE 557
Query: 368 PNLEH-YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG--SLLS--------SCRTHG 416
P + Y M ++ +G + + + IRS+ + N + S++ + HG
Sbjct: 558 PQMAAPYVEMANIYAAAG-MWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHG 616
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
HVE E L L + +VL ++Y E
Sbjct: 617 HVE-NEVIYFTLNGLSLFAKDKHVLYKDVYKE 647
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 256/472 (54%), Gaps = 34/472 (7%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLI--LAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+ N+ L QI A+ ++ + + + L +F + T + + YA +F M P +
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
++FNSM + YS E LF + GI PD YTF LLKAC L G+ +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++ G + + ++ +YT C DVD
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECE-------------------------------DVDSA 183
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F + E VV +N MI+ + R +EAL LF EM+ + + +E T+++VL CA L
Sbjct: 184 RXVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
G++D+G+WIH YA+ + K V V AL+D + KCG LD A ++F+++ K+ +W+AM
Sbjct: 244 GSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM 302
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I A +G+ E + ++E+M ++ V P++ TF+G+L C+H G VE+ R+ F+ M
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
IVP+++HYG MVD+L +G + +AY+ I + I P +W LL++C +H +++LAE
Sbjct: 363 IVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVS 422
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + L+ + G+YV+LSN+YA +W+ ++LR M++ K PG S IE
Sbjct: 423 ERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 233/425 (54%), Gaps = 5/425 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVG 114
NQ + + + + S I + NG E K F+ ++ G+ P+ TF LL C G
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSG 78
Query: 115 DLRVGQCVHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ +HG + G +R + ++ +Y+ G + VFD M + + N MI
Sbjct: 79 SETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMI 138
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G VD + +F +M ER ++SW MI+ K G EAL F EM+ D
Sbjct: 139 DGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYV 198
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ G W+H Y + ++ V V N+L+D YC+CG ++ AR VF +
Sbjct: 199 AIIAALNACTNLGALSFGLWVHRYVMNQD-FKNNVRVSNSLIDLYCRCGCVEFAREVFDK 257
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M +G P+ TF G LT C+H GLVE+
Sbjct: 258 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 317
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F +M + I P +EHYGC+VD+ R+G + +A +I SM ++PN + GSLL++CR
Sbjct: 318 LRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACR 377
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
THG + LAE +K L +L + NYV+LSN+YA G+W+ A +R M+ +KK PG
Sbjct: 378 THGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPG 437
Query: 473 QSLIE 477
S IE
Sbjct: 438 FSSIE 442
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 151/389 (38%), Gaps = 76/389 (19%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LLHG + L + H ++ + + +K A +F+ M + + +
Sbjct: 85 LLHGYACKLGLDRTHV-----------MVGTAIIGMYSKRGHVKKARLVFDYMEDINSVT 133
Query: 68 FNSMIKAYSLNGPSEEPVKLF------------ALLKNL-------------------GI 96
+N+MI Y +G + VK+F A++ G+
Sbjct: 134 WNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGV 193
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD L AC +G L G VH ++ F+ + +++LY CG ++ +
Sbjct: 194 RPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFARE 253
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD+M R V+ N +I GF G+ + L FR+M+E
Sbjct: 254 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE---------------------- 291
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALV 275
+ F+ D T L C+ +G V+ G ++ + G+ ++ G LV
Sbjct: 292 ---------EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYG-CLV 341
Query: 276 DFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
D Y + G L+ A V + +P K N V ++++ +G + E + ++ +
Sbjct: 342 DLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSH 401
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGL 363
+ +V + A G E A ++ M GL
Sbjct: 402 SNYVILSNMYAADGKWEGASQMRRKMKGL 430
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 249/458 (54%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H + +R+ +H +++ V + ++ A +++ + V++ ++MI Y LNG
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
S+E VK+F L GI P+ A +L AC + +++GQ +H +++ +E +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG++D +SH Y+F ++ + V+
Sbjct: 489 ALMDMYAKCGRLD--------LSH-----------------------YIFSKISAKDEVT 517
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MISS ++G EAL LF EM + + T+ +VL CA L A+ G+ IH
Sbjct: 518 WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV- 576
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G R + +AL+D Y KCG L+ A VF+ +P KN VSWN++I+ G + V
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESV 636
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L M +G + TF+ +++ CAHAG V++ LF MT + I P +EH+ CMVD+
Sbjct: 637 SLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDL 696
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
R+G + +A +LI M +P+A IWG+LL +CR H +VELAE A +EL L+P NSG Y
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYY 756
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SNI A GRWD +R M++ V+K PG S ++
Sbjct: 757 VLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVD 794
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 214/511 (41%), Gaps = 107/511 (20%)
Query: 2 ERKILRLLHGRNTRTHLT---QIHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIF 57
+R++L +L G + +HL+ Q+H + LH ++ L V + + A +F
Sbjct: 39 DRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF 98
Query: 58 NQMRNPSV---LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW-------PDEYTFAPLL 107
+ + + L +N +I+ ++ G ALL L +W PD +TF ++
Sbjct: 99 SSLPRGAAACALPWNWLIRGLTMAGDYRS-----ALLFYLKMWAHPSAPLPDSHTFPYVV 153
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
K+C +G + +G+ VH G + + ++++Y + G + D +VFD M+ RD +
Sbjct: 154 KSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCV 213
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+ N+M+ G+ K G V S A+ LF +MR
Sbjct: 214 LWNVMMDGYVKAGSV-------------------------------SSAVELFGDMRASG 242
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E + AT+ L + A + G +H+ A GL + V+V N LV Y KC LD
Sbjct: 243 CEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE-VAVANTLVSMYAKCKCLDDG 301
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F +PR ++V+WN MISG NG + + L+ M G+ P+ T V +L
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 348 GLVEKARELFASMTGLHSIVPNLEHY-----GCMVDVLGRSGCVREA---YD-------- 391
+ +EL IV N H +VD+ + VR A YD
Sbjct: 362 NGFNQGKELHG------YIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVV 415
Query: 392 ---------LIRSMS--------------IRPNAAIWGSLLSSCRTHGHVELAE----HA 424
++ MS IRPNA S+L +C + ++L + +A
Sbjct: 416 IGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYA 475
Query: 425 VKELINLEPWNSGNYV--LLSNIYAEGGRWD 453
+K + YV L ++YA+ GR D
Sbjct: 476 LK-----NAYEGRCYVESALMDMYAKCGRLD 501
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 46/382 (12%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ M +L+N M+ Y G V+LF ++ G P+ T A L
Sbjct: 200 ARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSAT 259
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
DL G +H ++ G E ++ +V +Y C +DDG K+F M D++ N M
Sbjct: 260 ESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGM 319
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + G VD+ L LF +M+ KSG D
Sbjct: 320 ISGCVQNGFVDQALLLFCDMQ---------------KSG----------------IRPDS 348
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V++LP L + G+ +H Y + ++ V V +ALVD Y KC + A++V+
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV-SALVDIYFKCRAVRMAQSVYD 407
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+VV + MISG NG + V+++ ++ +G+ PN VL CA ++
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 353 ARELFASMTGLHSIVPNLEHYG------CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+E LHS + G ++D+ + G + ++ + +S + + W
Sbjct: 468 GQE-------LHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWN 519
Query: 407 SLLSSCRTHGHVELAEHAVKEL 428
S++SS +G E A + +E+
Sbjct: 520 SMISSFAQNGEPEEALNLFREM 541
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 234/421 (55%), Gaps = 7/421 (1%)
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL---GVGDLRV 118
N ++ + + I Y +G + F ++ I P+ TF LL AC +
Sbjct: 53 NDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISF 112
Query: 119 GQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G +H + + G + + +G ++++Y CG+++ FD+M R+++ N MI G+
Sbjct: 113 GTAIHAHVRKLGLD-INDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGY 171
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+ G + L +F + ++ +SW +I K EAL F EM+ D TV+
Sbjct: 172 MRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVI 231
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
AV+ CA LG + +G W+H + +R V V N+L+D Y +CG +D AR VF +P+
Sbjct: 232 AVIAACANLGTLGLGLWVHRLVMTQD-FRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQ 290
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+ +VSWN++I G A NG + + + M +G P+ ++ G L C+HAGL+ + +
Sbjct: 291 RTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRI 350
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F M + I+P +EHYGC+VD+ R+G + EA +++++M ++PN I GSLL++CRT G
Sbjct: 351 FEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQG 410
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++ LAE+ + LI L+ NYVLLSNIYA G+WD A +R M+E ++K PG S I
Sbjct: 411 NIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSI 470
Query: 477 E 477
E
Sbjct: 471 E 471
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 131/325 (40%), Gaps = 77/325 (23%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
R++ + T IHAH + L ++++ L + CG + + A F+QM +++
Sbjct: 107 RSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLA---FDQMGVRNLVS 163
Query: 68 FNSMIKAYSLNGPSEEPVKLF------------ALLKNL-------------------GI 96
+N+MI Y NG E+ +++F AL+ G+
Sbjct: 164 WNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGV 223
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD T ++ AC +G L +G VH ++ F + ++++Y+ CG +D +
Sbjct: 224 APDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQ 283
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGR 212
VFD M R ++ N +I GF G D+ L F M+E VS+ + + +G
Sbjct: 284 VFDRMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGL 343
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
E LR+F M+ V +LP G
Sbjct: 344 IGEGLRIFEHMK---------RVRRILPRIEHYG-------------------------- 368
Query: 273 ALVDFYCKCGILDTARNVFKEIPRK 297
LVD Y + G L+ A NV K +P K
Sbjct: 369 CLVDLYSRAGRLEEALNVLKNMPMK 393
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
R+ + SN ++ + S CG I A ++F++M +++ +NS+I +++NG ++E +
Sbjct: 258 FRNNVKVSNSLIDMY-SRCGC---IDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADEAL 313
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR-----SGFERFGSIRIG 140
F ++ G PD ++ L AC G + G + + R E +G +
Sbjct: 314 SYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCL--- 370
Query: 141 VVELYTSCGQMDDGMKVFDEMSHR--DVIVRNLM 172
V+LY+ G++++ + V M + +VI+ +L+
Sbjct: 371 -VDLYSRAGRLEEALNVLKNMPMKPNEVILGSLL 403
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 247/462 (53%), Gaps = 39/462 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q +AH ++ L + VS + + ++F + V+ + ++I NG
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNG 183
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E ++ F +++ G+ DE T +L A + D+ G+ VHG + SG + +
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESG-RVIWDVYV 242
Query: 140 G--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G +V++Y+ CG DD +K +F EM R++
Sbjct: 243 GSALVDMYSKCGYCDDAVK-------------------------------VFNEMPTRNL 271
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSW +I+ + R EAL++F EM + E +++TV + L CA+LG++D G+W+H Y
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 258 AESS--GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ S GL K+ G ALVD Y KCG +D A VF+++P K+V W AMI+GLA G
Sbjct: 332 VDRSKLGLNSKL---GTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDA 388
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ L+ QMI V PN TF+GVL+ CAH GLV++ ELF M + + PN++HYGC
Sbjct: 389 LSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGC 448
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G + EA I SM + P +WG+L S C H EL EH LI L+P +
Sbjct: 449 MVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHH 508
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
SG Y+LL+N+Y+ +W+ A +R M+ V KSP S IE
Sbjct: 509 SGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIE 550
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/452 (36%), Positives = 242/452 (53%), Gaps = 48/452 (10%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA------- 89
L S CG ++K A +F+++ +V+ + SMI Y N ++ + LF
Sbjct: 1183 LIDMYSKCG---QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 1239
Query: 90 -LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYT 146
+ + D +L AC V + + VHG +++ GF+ GSI +G +++ Y
Sbjct: 1240 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD--GSIGVGNTLMDAYA 1297
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
CGQ KVFD M +D I SWN MI+
Sbjct: 1298 KCGQPLVSKKVFDWMEEKDDI-------------------------------SWNSMIAV 1326
Query: 207 LGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+SG EAL +FH M R + T+ AVL CA GA+ G+ IH L
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V VG +++D YCKCG ++ A+ F + KNV SW AM++G +GR + ++++ +M
Sbjct: 1387 NVC-VGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKM 1445
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
+ GV PN TFV VL C+HAGLVE+ F +M + I P +EHYGCMVD+ GR+GC
Sbjct: 1446 VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGC 1505
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
+ EAY+LI+ M ++P+ +WGSLL +CR H +V+L E A ++L L+P N G YVLLSN+
Sbjct: 1506 LNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNL 1565
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA+ GRW D E +RM M+ + K PG SL+E
Sbjct: 1566 YADAGRWADVERMRMLMKNRQLVKPPGFSLVE 1597
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 213/388 (54%), Gaps = 1/388 (0%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+K L LL HL QIHA +R L L+ + + T I YA +F Q++N
Sbjct: 28 KKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQN 87
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P +N +I+A ++NG SE+ + L+ + GI D++TF ++KAC + +G+ V
Sbjct: 88 PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVV 147
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +I+ GF ++ +++ Y CG +KVF++M R+V+ +I G GD+
Sbjct: 148 HGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDL 207
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ +F E+ ++VVSW MI+ ++ + EAL LF M+ + +E T+V+++ C
Sbjct: 208 QEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKAC 267
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G + +G+ IH YA + + V +G AL+D Y KCG + A VF+ +PRK++ +W
Sbjct: 268 TEMGILTLGRGIHDYAIKNCIEIGVY-LGTALIDMYSKCGSIKDAIEVFETMPRKSLPTW 326
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N+MI+ L +G G+ + L+ +M V P+ TF+GVL C H V++ F MT
Sbjct: 327 NSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQ 386
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAY 390
+ I P EHY CM ++ RS + EA+
Sbjct: 387 HYGIAPIPEHYECMTELYARSNNLDEAF 414
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 201/460 (43%), Gaps = 76/460 (16%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
AT + + +V +NS+I + G S E ++ F+ L+ LG+ P +F +K+C
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G+ H + GFE + ++++Y+ CGQ+ D +FDE+ R+V+ M
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSM 1214
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELD 231
I G+ + D L LF++ E E+ D LD
Sbjct: 1215 ITGYVQNEQADNALLLFKDFLEEET------------------------EVEDGNNVPLD 1250
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
+V+VL C+R+ I + +H + G + + VGN L+D Y KCG ++ VF
Sbjct: 1251 SVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVGNTLMDAYAKCGQPLVSKKVF 1309
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGL- 349
+ K+ +SWN+MI+ A +G +E++ M+ GV N T VL CAHAG
Sbjct: 1310 DWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGAL 1369
Query: 350 ----------------------------------VEKARELFASMTGLHSIVPNLEHYGC 375
VE A++ F M N++ +
Sbjct: 1370 RAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKE-----KNVKSWTA 1424
Query: 376 MVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEH---AVKELI 429
MV G G +EA D+ M ++PN + S+L++C G VE H A+K
Sbjct: 1425 MVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKY 1484
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETL--RMWMRENNV 467
++EP +Y + +++ G ++A L RM M+ + V
Sbjct: 1485 DIEP-GIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 144/330 (43%), Gaps = 54/330 (16%)
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+ ++ + + +V SWN +I+ L + G EALR F +R ++ + C+ L
Sbjct: 1097 WFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALC 1156
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+ G+ H A G + + V +AL+D Y KCG L AR +F EIP +NVVSW +MI
Sbjct: 1157 DLVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMI 1215
Query: 307 SGLAFNGRGELGVELYEQMIAK--------GVSPNKATFVGVLTCCA-----------HA 347
+G N + + + L++ + + V + V VL+ C+ H
Sbjct: 1216 TGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHG 1275
Query: 348 GLVEK------------------------ARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+V+K ++++F M I + M+ V +S
Sbjct: 1276 FVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDI-----SWNSMIAVYAQS 1330
Query: 384 GCVREAYD----LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGN 438
G EA + ++R + +R NA ++L +C G + + ++I ++ +N
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
+ ++Y + GR + A+ M+E NVK
Sbjct: 1391 GTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 1420
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ L + + + + ++ A K F++M+ +V + +M+ Y ++G
Sbjct: 1375 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 1434
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGFERFG 135
++E + +F + G+ P+ TF +L AC G + G H I G E +G
Sbjct: 1435 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 1494
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK-KGDVDKGLYLFREMRE 194
+ V+L+ G +++ + M + V + G C+ +VD G +++ E
Sbjct: 1495 CM----VDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFE 1550
Query: 195 RSV--VSWNLMISSL-GKSGR--DSEALRLFHEMR 224
+ +++S+L +GR D E +R+ + R
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 1585
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 238/434 (54%), Gaps = 40/434 (9%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
GTL + A K+F +M +V+++ SMI Y LN + F L +
Sbjct: 36 GTLCSMVSANKVFCEMVEKNVVIWTSMINGYLLNKDLVSARRYFDL-------------S 82
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
P ER + +V Y G M + +FD+M R
Sbjct: 83 P--------------------------ERDIVLWNTMVAGYIEMGNMMEARSLFDQMPCR 116
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N ++ G+ GD++ +F EM ER+V SWN +I ++GR SE L F M
Sbjct: 117 DVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 176
Query: 225 DQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
D+ ++AT+ VL CA+LGA D G+ +H Y E+ G + V+V NAL+D Y KCG
Sbjct: 177 DEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGENLGYNKVDVNVKNALIDMYGKCGA 236
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VFK I R++++SWN MI+GLA +G G ++L+ +M G+SP+K TFVGVL
Sbjct: 237 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALDLFHEMKNCGISPDKVTFVGVLCA 296
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H GLVE F SM SI P +EH GC+VD+L R+G + +A + I M ++ +A
Sbjct: 297 CKHMGLVEDGLAYFNSMFTDFSITPQIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAV 356
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW +LL + + + V+ E A+KELI LEP N N+V+LSNIY + GR+DDA L++ MR
Sbjct: 357 IWATLLGASKVYKKVDTGELALKELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMR 416
Query: 464 ENNVKKSPGQSLIE 477
+ KK G S IE
Sbjct: 417 DTGFKKEAGISWIE 430
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ + G I+ A ++F ++ ++ +N+MI + +G E + LF +KN GI PD
Sbjct: 227 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALDLFHEMKNCGISPD 286
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGFERFGSIRIGVVELYTSCGQMDDG 154
+ TF +L AC +G + G + I E G VV+L + G +
Sbjct: 287 KVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGC----VVDLLSRAGFLTQA 342
Query: 155 MKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFRE---MRERSVVSWNLMISSLGKS 210
++ ++M + D ++ ++ VD G +E + R+ ++ ++ + G +
Sbjct: 343 VEFINKMPVKADAVIWATLLGASKVYKKVDTGELALKELIKLEPRNPANFVMLSNIYGDA 402
Query: 211 GRDSEALRLFHEMRDQAFE 229
GR +A RL MRD F+
Sbjct: 403 GRFDDAARLKVAMRDTGFK 421
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 257/433 (59%), Gaps = 7/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLL 107
+ + A F +M + ++ +NSMI YS G + E + +F+ +L + PD +T A +L
Sbjct: 223 QFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASIL 282
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD--EMSHRD 165
AC + L +G+ +H I+R+ E G++ ++ +Y G ++ + + S+ +
Sbjct: 283 SACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLN 342
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+I ++ G+ K G+V +F ++R+R VV+W MI ++G ++AL LF M +
Sbjct: 343 IIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVN 402
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ E + T+ A+L + + L ++ G+ IH+ A +G SV NAL+ Y K G ++
Sbjct: 403 EGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG-ESSTPSVTNALIAMYAKTGNIN 461
Query: 286 TARNVFKEIP--RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
A+ VF ++P +K +VSW +MI LA +G G+ + L+E+M++ G+ P+ T+VGVL+
Sbjct: 462 VAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H GLVE+ R+ + MT +H I P L HY CM+D+ GR+G ++EAY I SM I P+
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
WGSLL+SC+ H + +LA+ A + L+ ++P NSG Y+ L+N+Y+ G+W++A R M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 464 ENNVKKSPGQSLI 476
+ V+K G S I
Sbjct: 641 DRGVRKEKGISWI 653
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 233/543 (42%), Gaps = 116/543 (21%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG- 79
+H ++ LH ++ + ++ +++A +F++M S +N++I Y+ G
Sbjct: 32 VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91
Query: 80 -----------PSEEPVKL---------FALLKNLGIW-----------PDEYTFAPLLK 108
P +PV F L N IW P ++T + +L
Sbjct: 92 FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDN-AIWMFAKMISERVPPSQFTVSNVLS 150
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+C L +G+ +H +++ G + ++ +Y CG VFD M+ +++
Sbjct: 151 SCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIST 210
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-A 227
N +I + + G + F +M +R +VSWN MIS + G + EAL +F +M ++ +
Sbjct: 211 WNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPS 270
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSY-----AESSGLYRKVVSVGNALVDFYCKCG 282
+ D T+ ++L CA L ++IG+ IH+Y E+SG +VGNAL+ Y K G
Sbjct: 271 LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG------AVGNALISMYAKSG 324
Query: 283 ------------------------ILD---------TARNVFKEIPRKNVVSWNAMISGL 309
+LD AR +F ++ ++VV+W AMI G
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--------- 360
NG +EL+ M+ +G PN T +L+ + ++E +++ AS
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 361 ------------TGLHSI------VPN----LEHYGCMVDVLGRSGCVREAYDLIR---S 395
TG ++ +PN + + M+ L + G +EA +L S
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAE---HAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
+ ++P+ + +LS+C G VE + + E+ +EP S +Y + ++Y G
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS-HYACMIDLYGRAGLL 563
Query: 453 DDA 455
+A
Sbjct: 564 QEA 566
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 39/396 (9%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
FA +L+ + + D G+ VH +II+ G + ++ Y G + VFDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
+ N +I G+ K+G+ + L EM + VSW +I + G A+ +F +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M + + TV VL CA +DIG+ IHS+ GL V V +L++ Y KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL-GSCVPVATSLLNMYAKCG 191
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
A+ VF + KN+ +WNA+IS +G+ EL +E+M + + ++ +++
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI----VSWNSMIS 247
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV---LGRSGCVREAYDLIRSMSIR 399
+ G +A +F+ M S+ P+ ++ L + ++ + I
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307
Query: 400 PNAAIWGSLLSSCRTHGHVELA----EHAVKELINLEPWNS--GNYVLLSNI-------- 445
+ A+ +L+S G VE+A EH +N+ + S Y L N+
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367
Query: 446 ----------------YAEGGRWDDA-ETLRMWMRE 464
Y + G W+DA E R+ + E
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE 403
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 253/459 (55%), Gaps = 33/459 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH +R +L ++ V + + YA ++F+Q+ + S++ +N+MI YSLN
Sbjct: 248 EIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNA 307
Query: 80 PSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
S E ++ G + PD T LL C + + +G+ VHG IR+GF +
Sbjct: 308 QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLE 367
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V++Y CG++ C LF +M ER+++
Sbjct: 368 TALVDMYGECGKLKPAE---------------------C----------LFGQMNERNLI 396
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN MI+S K+G + +A+ LF ++ ++ + D T+ ++LP A L ++ + IH Y
Sbjct: 397 SWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYV 456
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
L V N++V Y KCG L AR +F + K+V+SWN +I A +G G +
Sbjct: 457 TKLKLDSNTF-VSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS 515
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL+ +M KG PN +TFV +L C+ AGLV + E F SM ++I P +EHYGC++D
Sbjct: 516 IELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILD 575
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
++GR+G + A + I M + P A IWGSLL++ R G VELAE A + +++LE N+G
Sbjct: 576 LIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGC 635
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN+YAE GRW+D E ++ M++ ++KS G S+++
Sbjct: 636 YVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVD 674
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 209/467 (44%), Gaps = 80/467 (17%)
Query: 27 RHKLHQSNLILAHFVSVCGTLNE------IKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
R K +QS L+ + VS+ L+ +K A +F MR ++N MI+ + NG
Sbjct: 47 RSKRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGL 106
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ V + ++ G+ D +T+ ++KAC G+ DL G+ VHG++I+SG + I
Sbjct: 107 FWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNS 166
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE------ 194
++ +Y G ++ VF EM RD++ N MI G+ GD + L FREM+
Sbjct: 167 LIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLD 226
Query: 195 ----------------------------RSVVSWNLMISS-----LGKSGRDSEALRLFH 221
RS + ++M+ + K GR A RLF
Sbjct: 227 RFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFD 286
Query: 222 EMRD-----------------QAFE---------------LDEATVVAVLPICARLGAVD 249
++ D Q+FE D T++ +LP CA+L A+
Sbjct: 287 QITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAIL 346
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G+ +H +A +G +V + ALVD Y +CG L A +F ++ +N++SWNAMI+
Sbjct: 347 LGKSVHGFAIRNGFLPHLV-LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASY 405
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
NG + L++ + K + P+ T +L A + +A ++ +T L + N
Sbjct: 406 TKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKL-KLDSN 464
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+V + G+ G + A ++ M+ + + W +++ + HG
Sbjct: 465 TFVSNSIVFMYGKCGNLLRAREIFDRMTFK-DVISWNTVIMAYAIHG 510
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 249/458 (54%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H + +R+ +H +++ V + ++ A +++ + V++ ++MI Y LNG
Sbjct: 369 ELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNG 428
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
S+E VK+F L GI P+ A +L AC + +++GQ +H +++ +E +
Sbjct: 429 MSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG++D +SH Y+F ++ + V+
Sbjct: 489 ALMDMYAKCGRLD--------LSH-----------------------YIFSKISAKDEVT 517
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MISS ++G EAL LF EM + + T+ +VL CA L A+ G+ IH
Sbjct: 518 WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV- 576
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G R + +AL+D Y KCG L+ A VF+ +P KN VSWN++I+ G + V
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESV 636
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L M +G + TF+ +++ CAHAG V++ LF MT + I P +EH+ CMVD+
Sbjct: 637 SLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDL 696
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
R+G + +A +LI M +P+A IWG+LL +CR H +VELAE A +EL L+P NSG Y
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYY 756
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SNI A GRWD +R M++ V+K PG S ++
Sbjct: 757 VLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVD 794
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 211/507 (41%), Gaps = 99/507 (19%)
Query: 2 ERKILRLLHGRNTRTHLT---QIHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIF 57
+R++L +L G + +HL+ Q+H + LH ++ L V + + A +F
Sbjct: 39 DRRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF 98
Query: 58 NQMRNPSV---LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW-------PDEYTFAPLL 107
+ + + L +N +I+ ++ G ALL L +W PD +TF ++
Sbjct: 99 SSLPRGAAACALPWNWLIRGLTMAGDYRS-----ALLFYLKMWAHPSAPLPDSHTFPYVV 153
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
K+C +G + +G+ VH G + + ++++Y + G + D +VFD M+ RD +
Sbjct: 154 KSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCV 213
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+ N+M+ G+ K G V S A+ LF +MR
Sbjct: 214 LWNVMMDGYVKAGSV-------------------------------SSAVELFGDMRASG 242
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E + AT+ L + A + G +H+ A GL + V+V N LV Y KC LD
Sbjct: 243 CEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE-VAVANTLVSMYAKCKCLDDG 301
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F +PR ++V+WN MISG NG + + L+ M G+ P+ T V +L
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 348 GLVEKARELFASMTGLHSIVPNLEHY-----GCMVDVLGRSGCVREA---YD-------- 391
+ +EL IV N H +VD+ + VR A YD
Sbjct: 362 NGFNQGKELHG------YIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVV 415
Query: 392 ---------LIRSMS--------------IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ MS IRPNA S+L +C + ++L +
Sbjct: 416 IGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYA 475
Query: 429 INLEPWNSGNYV--LLSNIYAEGGRWD 453
+ + YV L ++YA+ GR D
Sbjct: 476 LK-NAYEGRCYVESALMDMYAKCGRLD 501
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 168/382 (43%), Gaps = 46/382 (12%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ M +L+N M+ Y G V+LF ++ G P+ T A L
Sbjct: 200 ARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSAT 259
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
DL G +H ++ G E ++ +V +Y C +DDG K+F M D++ N M
Sbjct: 260 ESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGM 319
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + G VD+ L LF +M+ KSG D
Sbjct: 320 ISGCVQNGFVDQALLLFCDMQ---------------KSG----------------IRPDS 348
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V++LP L + G+ +H Y + ++ V V +ALVD Y KC + A++V+
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV-SALVDIYFKCRAVRMAQSVYD 407
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+VV + MISG NG + V+++ ++ +G+ PN VL CA ++
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 353 ARELFASMTGLHSIVPNLEHYG------CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+E LHS + G ++D+ + G + ++ + +S + + W
Sbjct: 468 GQE-------LHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWN 519
Query: 407 SLLSSCRTHGHVELAEHAVKEL 428
S++SS +G E A + +E+
Sbjct: 520 SMISSFAQNGEPEEALNLFREM 541
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 149/455 (32%), Positives = 251/455 (55%), Gaps = 33/455 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +++ LH I +++ ++K A +F +M + + +++ SMI Y N
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E + L+ ++ G PDE T A L+ AC + DL VG +H I + +
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+V +Y CG + +VFD ++ ++ V +W
Sbjct: 221 LVNMYAKCGDLKTARQVFD-------------------------------QLSDKDVYAW 249
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+ +I K+ R +EAL+LF E+ + +E T++AV+ CA+LG ++ G+W+H Y
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V S+ N+L+D + KCG +D A+ +F + K+++SWN+M++GLA +G G +
Sbjct: 310 RTQKGHSV-SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREAL 368
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ M + P++ TF+GVLT C+HAGLV++ ++LF + L+ + EHYGCMVD+
Sbjct: 369 AQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDL 428
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G + EA + IR M ++P+ AIWGS+L +CR + ++EL E A + L+ LEP N G Y
Sbjct: 429 LCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVY 488
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+LLSNIYA W++ + +R M E ++K+PG S
Sbjct: 489 ILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCS 523
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 49/417 (11%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY-SLNGPSEE 83
F+ HK + LI AH +S+ G+L + YA +F R VL +NSM++A+ + N P
Sbjct: 6 FIHHKPSLNKLI-AHVLSM-GSLG-VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRA 62
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
+L+ PD +TF LLK C + + +VG+ +HG++++ I ++
Sbjct: 63 LQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLN 122
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
+Y +CG + +F+ M HR+ +V MI G+ K ++ L L+++M E
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEE--------- 173
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
F DE T+ ++ CA L + +G +HS+ +
Sbjct: 174 ----------------------DGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211
Query: 264 YRKVVSV-GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
K+ +V G+ALV+ Y KCG L TAR VF ++ K+V +W+A+I G N R ++L+
Sbjct: 212 --KICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 323 EQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL---HSIVPNLEHYGCMVD 378
++ + PN+ T + V++ CA G +E R + +T HS+ N ++D
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLID 325
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH--GHVELAEHAVKELINLEP 433
+ + G + A + SMS + + W S+++ H G LA+ + + +L+P
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQP 381
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H+H + ++ + V++ ++K A ++F+Q+ + V ++++I Y N
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNN 260
Query: 80 PSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
S E ++LF + + P+E T ++ AC +GDL G+ VH I R+ S+
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++++ CG +D ++FD MS++D+I
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYKDLI------------------------------- 349
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN M++ L G EAL FH M+ + DE T + VL C+ G V G+ + +
Sbjct: 350 SWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL--FY 407
Query: 259 ESSGLY--RKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRG 315
E LY R +VD C+ G+L AR + +P + + W +M+
Sbjct: 408 EIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNL 467
Query: 316 ELGVE 320
ELG E
Sbjct: 468 ELGEE 472
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 266/522 (50%), Gaps = 53/522 (10%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQ--M 60
+L L ++ + Q + L +++ +S L + YA IF M
Sbjct: 115 LLSKLQQLSSVKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAM 174
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV-----GD 115
NP V N+MI+AY+ + + + L+ + I D +T+ LKAC V GD
Sbjct: 175 DNPFVC--NTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFTYPFGLKACARVLWCNEGD 232
Query: 116 LRVGQC--------VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
++ Q +H + R G ++ I+ +V LY+ CG +D VFDEM+ + +
Sbjct: 233 IKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTIT 292
Query: 168 VRNLMIHGFCKKGDVDKGLYL-------------------------------FREMRERS 196
N+MI + + D D L F+EM ER
Sbjct: 293 SWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQEMPERD 352
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VSWN MI+ + + AL LF EM E + T+++VL CA GA++IG+ IH
Sbjct: 353 AVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIGRKIHL 412
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+ Y+ + NALVD Y KCG L+ A VF E+ K++ WNAMI LA +G E
Sbjct: 413 SLKQRE-YKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCE 471
Query: 317 LGVELYE--QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ L+ +M G PN+ TF+GVL C+H GLV++ R F M + I+P+++HYG
Sbjct: 472 EALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYG 531
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+L R G ++EA+ +I++M N+ +W +LL +CR H HV+LAE + ++L +EP
Sbjct: 532 CMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPL 591
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
G+YVLLSNIYAE RW+D E +R M + V K PG S I
Sbjct: 592 RDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPGSSHI 633
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 244/436 (55%), Gaps = 37/436 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG ++E A IF +M V+ + +M+ Y LNG + + L +++ + P+ T
Sbjct: 272 CGNMDE---AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTL 328
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A +L AC + L+ G+C+HG IR E
Sbjct: 329 ASVLSACASLYSLKHGRCLHGWAIRQKLES------------------------------ 358
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+VIV +I + K +V+ +F + ++ WN +IS +G +A+ LF +M
Sbjct: 359 -EVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQM 417
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+A + ++AT+ ++LP A L + + +H Y SG ++ V L+D Y KCG
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI-EVATILIDIYSKCGS 476
Query: 284 LDTARNVFKEIPRKN--VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
L++A N+F IP+K+ +++W+A+I+G +G GE + L++QM+ GV PN+ TF +L
Sbjct: 477 LESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSIL 536
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+HAGLV++ LF M + + +HY C++D+LGR+G + EAY+LIR+M+ RPN
Sbjct: 537 HACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPN 596
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A+WG+LL SC H +VEL E A K L LEP N+GNYVLL+NIY+ GRW DAE +R+
Sbjct: 597 HAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLM 656
Query: 462 MRENNVKKSPGQSLIE 477
M ++K+P SLIE
Sbjct: 657 MNNIGLRKTPAHSLIE 672
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 215/435 (49%), Gaps = 46/435 (10%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNL---ILAHFVSVCGTLNEIKYATKIFNQ 59
+ +L+ R + + QIHAH + L S +L+ + +A K+F++
Sbjct: 22 QSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDE 81
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+RNPS+ +N+MI+ Y+ +G S + + LF +L + WPD YT+ ++KAC +
Sbjct: 82 LRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G +H + SGF+ ++ ++ +Y +CG+M+ +VFD
Sbjct: 142 GALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDL------------------ 183
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
MRER++VSWN MI+ K+G EAL +F M + E D ATVV+V
Sbjct: 184 -------------MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSV 230
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
LP+C+ L +++G+ +H+ E L +SV N+L+D Y KCG +D A+ +F E+ +++
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGED-ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL-- 356
VVSW M++G NG + L + M + V PN T VL+ CA ++ R L
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349
Query: 357 FASMTGLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+A L S IV ++D+ + V ++ + S + A W +++S C
Sbjct: 350 WAIRQKLESEVIVET-----ALIDMYAKCNNVNLSFRVFSKTS-KQRTAPWNAIISGCIH 403
Query: 415 HGHVELAEHAVKELI 429
+G A K+++
Sbjct: 404 NGLSRKAIELFKQML 418
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 205/436 (47%), Gaps = 41/436 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N ++A +++ CG E++ A ++F+ MR +++ +N+MI Y NG +E + +F +
Sbjct: 162 NSLMAMYMN-CG---EMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIG 217
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
GI PD T +L C + +L VG+ VH + S+ ++++Y CG MD+
Sbjct: 218 KGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDE 277
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+F EM RDV+ M++G+ GD L L + M+ SV
Sbjct: 278 AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV---------------- 321
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+ + T+ +VL CA L ++ G+ +H +A L +V+ V A
Sbjct: 322 ---------------KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI-VETA 365
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KC ++ + VF + ++ WNA+ISG NG +EL++QM+ + V PN
Sbjct: 366 LIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPN 425
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
AT +L A +++AR + + + +E ++D+ + G + A+++
Sbjct: 426 DATLNSLLPAYAFLTDLQQARNMHGYLIR-SGFLSRIEVATILIDIYSKCGSLESAHNIF 484
Query: 394 RSMSIRPNAAI-WGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYAEGG 450
+ + I W ++++ HGH E A +++ ++P N + + + + G
Sbjct: 485 NGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKP-NEITFTSILHACSHAG 543
Query: 451 RWDDAETLRMWMRENN 466
D+ L +M E+N
Sbjct: 544 LVDEGLGLFKFMLEDN 559
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 124/299 (41%), Gaps = 30/299 (10%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +R KL ++ + + N + + ++F++ +N++I NG
Sbjct: 347 LHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGL 406
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
S + ++LF + + P++ T LL A + DL+ + +HG +IRSGF +
Sbjct: 407 SRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATI 466
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y+ CG ++ +F+ + +D + +++W
Sbjct: 467 LIDIYSKCGSLESAHNIFNGIPKKD-----------------------------KDIITW 497
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+ +I+ G G A+ LF +M + +E T ++L C+ G VD G + +
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
++D + G L+ A + + + R N W A++ + ELG
Sbjct: 558 DNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELG 616
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 242/427 (56%), Gaps = 6/427 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +N+ A +IF N V+L+NSMI Y N + E ++LF ++ G+ D TF
Sbjct: 252 CGRMND---ARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTF 308
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A +L AC +G + G VH + + GF I +V++Y+ C + DD K+F ++
Sbjct: 309 ASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQA 368
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D I+ N MI + G +D +F M +S++SWN MI ++ EAL LF EM
Sbjct: 369 YDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEM 428
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCG 282
+D+ ++ V+ CA + ++++G+ I + A GL + +++S +LVDFYCKCG
Sbjct: 429 NKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIST--SLVDFYCKCG 486
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+++ R +F + + + V WN+M+ G A NG G + +++QM + GV P TFVGVL+
Sbjct: 487 LVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLS 546
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C H GLVE+ R+ F +M + I P +EHY CMVD+ R+G + +A +LI M ++ +
Sbjct: 547 ACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADT 606
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
++W S+L C HG+ L + K +I+L+P NSG YV LS IYA W + +R M
Sbjct: 607 SMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLM 666
Query: 463 RENNVKK 469
+ + K
Sbjct: 667 YDKKIPK 673
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/458 (30%), Positives = 239/458 (52%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
QIHA +R+ + SN+++ + + + G + YA +F M ++ +NS+I + +
Sbjct: 860 QIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKS 919
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G ++ F L++++G PD++T + ++ C + DL G+ + IR GF +
Sbjct: 920 GYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVS 979
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++L++ C +++D ++VF+E+ D ++ C
Sbjct: 980 SASIDLFSKCNRLEDSVRVFEEIYQWDSVL--------C--------------------- 1010
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
N MISS G AL+LF + E T+ VL + L VD G IHS
Sbjct: 1011 --NAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLV 1068
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
SGL V+ V ++LV+ Y K G++D+A F +I ++++SWN MI GLA+NGR
Sbjct: 1069 VKSGLESDVI-VASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKA 1127
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E++++++ G P++ T GVL C GLV++ +F+SM + ++P +EHY C+VD
Sbjct: 1128 LEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVD 1187
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
++ R G ++EA D++ M P+ IWGSLL +C +G + E + ++ LEP +S
Sbjct: 1188 MMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLP 1247
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
Y++L+ Y GRW+ + M+E V+K G S I
Sbjct: 1248 YLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWI 1285
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 186/409 (45%), Gaps = 51/409 (12%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP------DEYTF 103
++ A ++FN+M + + +NSMI Y+ NG +E V LF K+L + P D +
Sbjct: 120 LEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLF---KDLSLNPLERFCGDTFVL 176
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A ++ AC +G L G+ +H I+ E + +V LY CG +D V + M
Sbjct: 177 ATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKE 236
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D + +I G+ G ++ +F VV WN MIS + EAL LF+ M
Sbjct: 237 PDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNM 296
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK--- 280
R + + D +T +VL C+ LG +D G +H++ G ++ + +ALVD Y K
Sbjct: 297 RRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDII-IDSALVDMYSKCRR 355
Query: 281 ----------------------------CGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
CG +D AR +F +P K+++SWN+MI G + N
Sbjct: 356 PDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQN 415
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLH--SIVP 368
++L+ +M G+ +K + GV++ CA +E ++FA T GL I+
Sbjct: 416 ACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIIS 475
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+VD + G V L M ++ + W S+L T+GH
Sbjct: 476 T-----SLVDFYCKCGLVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGH 518
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 44/398 (11%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N+ L FV E++ A +F++M V+ +N+MI Y G ++ + F+ ++
Sbjct: 780 NIFLKAFVR----FGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK 835
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
GI P +T++ LL V G+ +H +IR+G V+L
Sbjct: 836 AGIRPSGFTYSTLLSF---VSSACRGKQIHASMIRNG-----------VDL--------- 872
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+V+V N +I + K G VD +F M E ++SWN +I S GKSG
Sbjct: 873 ----------SNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQ 922
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+ ALR F MR + D+ TV V+ +C+ L ++ G+ I + G + V +A
Sbjct: 923 NLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSI-VSSA 981
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
+D + KC L+ + VF+EI + + V NAMIS A++G GE ++L+ + + + P
Sbjct: 982 SIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPT 1041
Query: 334 KATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
+ T VL+ + V++ ++ + + +GL S ++ +V++ + G + A
Sbjct: 1042 EFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLES---DVIVASSLVEMYAKFGLIDSAMK 1098
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ R + W +++ +G V A KEL+
Sbjct: 1099 TFAKIGAR-DLISWNTMIMGLAYNGRVSKALEIFKELL 1135
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 122/233 (52%), Gaps = 3/233 (1%)
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
+I+ GF + ++LY+ G +D ++VF+++ +++I N+ + F + G++++
Sbjct: 736 LIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERA 795
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
+F EM +R VVSWN MIS G +A R F EM+ T +L +
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF---V 852
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+ G+ IH+ +G+ V VGN+L+ Y K G++D A VF + +++SWN++
Sbjct: 853 SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSL 912
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
I +G L + + M + G SP++ T V+T C++ +EK ++FA
Sbjct: 913 IWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFA 965
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 67/326 (20%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKV 157
D ++ A L +C G + G+ +H ++SG SI ++++Y+ C M + ++
Sbjct: 5 DLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQL 64
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+EM R+ N MI G+ K G K L LF M + SWN++IS K G A
Sbjct: 65 FEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVAR 124
Query: 218 RLFHEM----------------------------RD------QAFELDEATVVAVLPICA 243
RLF+EM +D + F D + V+ C
Sbjct: 125 RLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACT 184
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN----- 298
LGA+D G+ IH+ + V +G++LV+ Y KCG +D+A +V + +
Sbjct: 185 NLGALDCGKQIHARIVVDEVEFDSV-LGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 299 --------------------------VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
VV WN+MISG N +EL+ M KGV
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 333 NKATFVGVLTCCAHAGLVEKARELFA 358
+ +TF VL+ C+ G++++ ++ A
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHA 329
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
++L ++V I A +IF+ M + S++ +NSMI +S N E + LF +
Sbjct: 371 TILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNK 430
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
LG+ D+++ A ++ AC + L +G+ + G E I +V+ Y CG ++
Sbjct: 431 LGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEH 490
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
G K+FD M D + N M+ G+ +G
Sbjct: 491 GRKLFDRMMKSDEVPWNSMLMGY-------------------------------ATNGHG 519
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHS----YAESSGLYRKVV 268
EAL +F +MR + + T V VL C G V+ G +W ++ Y + G+
Sbjct: 520 IEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHY-- 577
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMI 326
+ +VD Y + G+L+ A N+ +++P K S W++++ G +G LG ++ +++I
Sbjct: 578 ---SCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRII 633
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+LD ++ L C G++ G+ +H SG+ V+S+GN L+ Y +C + A+
Sbjct: 3 DLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQ 62
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG--VLTCCAH 346
+F+E+P++N SWN MI G +G +EL++ M P+K F V++ A
Sbjct: 63 QLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM------PHKDAFSWNVVISGFAK 116
Query: 347 AGLVEKARELFASMTGLHSIVPN--LEHYGCMVDVLGRSGCVREAYDLIRSMSIRP---- 400
G +E AR LF M + I N + Y C +G +EA L + +S+ P
Sbjct: 117 EGNLEVARRLFNEMPWKNGIAWNSMIHGYAC-------NGRPKEAVGLFKDLSLNPLERF 169
Query: 401 --NAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGNYVLLSNIYAEGGRWDDAET 457
+ + +++ +C G ++ + ++ E ++S L N+Y + G D A
Sbjct: 170 CGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANH 229
Query: 458 LRMWMRENN 466
+ M+E +
Sbjct: 230 VLNLMKEPD 238
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+QIH+ ++ L ++ + V + I A K F ++ ++ +N+MI + N
Sbjct: 1062 SQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYN 1121
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER-FGSI 137
G + +++F L G PDE T A +L AC VG G G I S E+ +G I
Sbjct: 1122 GRVSKALEIFKELLIGGPPPDEITLAGVLLAC-NVG----GLVDEGLSIFSSMEKEYGVI 1176
Query: 138 -----RIGVVELYTSCGQMDDGMKVFDEMSH 163
+V++ + G++ + M + + M H
Sbjct: 1177 PAIEHYACIVDMMSRGGKLKEAMDIVELMPH 1207
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 240/425 (56%), Gaps = 37/425 (8%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F++M + +V+ + +MI AYS +++ ++ L+ G+ P+ +T++ +L+AC G
Sbjct: 19 AQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDG 78
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ +LR C II+ G + DV VR+ +
Sbjct: 79 LFNLRQLHCC---IIKIGLDS-------------------------------DVFVRSAL 104
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + + G+++ L +F EM +V W+ +I+ ++ EALRLF M+ F +
Sbjct: 105 IDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQ 164
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+ +VL C L +++G+ +H + Y + + + NAL+D YCKCG L+ A VF
Sbjct: 165 TTLTSVLRACTGLALLELGRQVHVHVLK---YDQDLILNNALLDMYCKCGSLEDANAVFV 221
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ K+V+SW+ MI+GLA NG + ++L+E M G+ PN T VGVL C+HAGLVE+
Sbjct: 222 RMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEE 281
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F SM L I P EHYGCM+D+LGR+G + EA DLI M P+A W +LL++C
Sbjct: 282 GLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNAC 341
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R H +V++A HA K+++ L+P ++G YVLLSNIYA RW+D +R M +KK PG
Sbjct: 342 RVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPG 401
Query: 473 QSLIE 477
S IE
Sbjct: 402 CSWIE 406
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 144/312 (46%), Gaps = 36/312 (11%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+L Q+H ++ L + + + V E++ A ++F++M +++++S+I ++
Sbjct: 81 NLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFA 140
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
N +E ++LF +K G + T +L+AC G+ L +G+ VH +++ +++
Sbjct: 141 QNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLI 198
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++Y CG ++D VF M +DVI + MI G
Sbjct: 199 LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG--------------------- 237
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIH 255
L ++G EAL+LF M+ + + T+V VL C+ G V+ G + H
Sbjct: 238 ----------LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFH 287
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGR 314
S E G+ G ++D + G L A ++ E+ + V+W A+++ +
Sbjct: 288 SMKELFGIDPGREHYG-CMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRN 346
Query: 315 GELGVELYEQMI 326
++ + +Q++
Sbjct: 347 VDVAIHAAKQIL 358
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N++I+ + K G + +F +M +R+VVSW MIS+ + + +AL M +
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+ T +VL C G ++ Q +H GL V V +AL+D Y + G L+ A
Sbjct: 64 PNMFTYSSVLRACD--GLFNLRQ-LHCCIIKIGLDSDVF-VRSALIDVYSRWGELENALR 119
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF E+ ++V W+++I+G A N G+ + L+++M G + T VL C L
Sbjct: 120 VFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLAL 179
Query: 350 VEKARELF----------------------------ASMTGLHSIVPNLEHYGCMVDVLG 381
+E R++ A+ + + ++ + M+ L
Sbjct: 180 LELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239
Query: 382 RSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVE---LAEHAVKELINLEPWN 435
++G +EA L SM I+PN +L +C G VE H++KEL ++P
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP-G 298
Query: 436 SGNYVLLSNIYAEGGRWDDAETL 458
+Y + ++ GR +A L
Sbjct: 299 REHYGCMIDLLGRAGRLSEAVDL 321
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 238/410 (58%), Gaps = 25/410 (6%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSC 148
L ++ + PD + +L AC +G G+ VHG +RSG F + +G +V++Y C
Sbjct: 4 LGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSG--SFEDLFVGNALVDMYAKC 61
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS----VVSWNLMI 204
G +D+ KVFD + +DV+ N M++G+ + G + L LF +MRE + VVSW+ +I
Sbjct: 62 GMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVI 121
Query: 205 SSLGKSGRDSEALRLFHEMR----DQAFEL-------------DEATVVAVLPICARLGA 247
++ + G E L +F EM+ + A EL + T+ L CARL A
Sbjct: 122 AAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAA 181
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+ IH+Y + + V N L+D Y K G +D AR VF + +KN VSW ++++
Sbjct: 182 LRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMT 241
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G +GRG+ +E++++M G+ P+ T + VL C+H+G++++ E F SM+ ++
Sbjct: 242 GYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVI 301
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P EHY CMVD+LGR+G + EA +LI M + P++ +W +LLS CR H +VEL EHA K+
Sbjct: 302 PGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQ 361
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ L N G+Y LLSNIYA RW D +R M+ + ++K PG S ++
Sbjct: 362 LLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQ 411
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 20 QIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
QIHA+ LR+ + L +A+ + + +I A +F+ ++ + + + S++ Y ++
Sbjct: 187 QIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMH 246
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI- 137
G +E +++F ++ +G+ PD T +L A C H +I G E F S+
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYA-----------CSHSGMIDQGIEFFNSMS 295
Query: 138 -RIGV----------VELYTSCGQMDDGMKVFDEM 161
GV V+L G++++ M++ + M
Sbjct: 296 KEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGM 330
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 244/436 (55%), Gaps = 37/436 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG ++E A IF +M V+ + +M+ Y LNG + + L +++ + P+ T
Sbjct: 272 CGNMDE---AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTL 328
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A +L AC + L+ G+C+HG IR E
Sbjct: 329 ASVLSACASLYSLKHGRCLHGWAIRQKLES------------------------------ 358
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+VIV +I + K +V+ +F + ++ WN +IS +G +A+ LF +M
Sbjct: 359 -EVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQM 417
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+A + ++AT+ ++LP A L + + +H Y SG ++ V L+D Y KCG
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRI-EVATILIDIYSKCGS 476
Query: 284 LDTARNVFKEIPRKN--VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
L++A N+F IP+K+ +++W+A+I+G +G GE + L++QM+ GV PN+ TF +L
Sbjct: 477 LESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSIL 536
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C+HAGLV++ LF M + + +HY C++D+LGR+G + EAY+LIR+M+ RPN
Sbjct: 537 HACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPN 596
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
A+WG+LL SC H +VEL E A K L LEP N+GNYVLL+NIY+ GRW DAE +R+
Sbjct: 597 HAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLM 656
Query: 462 MRENNVKKSPGQSLIE 477
M ++K+P SLIE
Sbjct: 657 MNNIGLRKTPAHSLIE 672
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 52/438 (11%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKL------HQSNLILAHFVSVCGTLNEIKYATKI 56
+ +L+ R + + QIHAH + L H LA ++CG +A K+
Sbjct: 22 QSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGC---APHARKL 78
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGD 115
F+++RNPS+ +N+MI+ Y+ +G S + + LF +L + WPD YT+ ++KAC
Sbjct: 79 FDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLL 138
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+G +H + SGF+ ++ ++ +Y +CG+M+ +VFD
Sbjct: 139 PEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDL--------------- 183
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
MRER++VSWN MI+ K+G EAL +F M + E D ATV
Sbjct: 184 ----------------MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATV 227
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+VLP+C+ L +++G+ +H+ E L +SV N+L+D Y KCG +D A+ +F E+
Sbjct: 228 VSVLPVCSYLKELEVGRRVHALVEVKNLGED-ISVWNSLLDMYAKCGNMDEAQMIFYEMD 286
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
+++VVSW M++G NG + L + M + V PN T VL+ CA ++ R
Sbjct: 287 KRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRC 346
Query: 356 L--FASMTGLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
L +A L S IV ++D+ + V ++ + S + A W +++S
Sbjct: 347 LHGWAIRQKLESEVIVET-----ALIDMYAKCNNVNLSFRVFSKXS-KQRTAPWNAIISG 400
Query: 412 CRTHGHVELAEHAVKELI 429
C +G A K+++
Sbjct: 401 CIHNGLSRKAIELFKQML 418
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 205/436 (47%), Gaps = 41/436 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N ++A +++ CG E++ A ++F+ MR +++ +N+MI Y NG +E + +F +
Sbjct: 162 NSLMAMYMN-CG---EMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIG 217
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
GI PD T +L C + +L VG+ VH + S+ ++++Y CG MD+
Sbjct: 218 KGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDE 277
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+F EM RDV+ M++G+ GD L L + M+ SV
Sbjct: 278 AQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESV---------------- 321
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+ + T+ +VL CA L ++ G+ +H +A L +V+ V A
Sbjct: 322 ---------------KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVI-VETA 365
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KC ++ + VF + ++ WNA+ISG NG +EL++QM+ + V PN
Sbjct: 366 LIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPN 425
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
AT +L A +++AR + + + +E ++D+ + G + A+++
Sbjct: 426 DATLNSLLPAYAFLTDLQQARNMHGYLIR-SGFLSRIEVATILIDIYSKCGSLESAHNIF 484
Query: 394 RSMSIRPNAAI-WGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYAEGG 450
+ + I W ++++ HGH E A +++ ++P N + + + + G
Sbjct: 485 NGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKP-NEITFTSILHACSHAG 543
Query: 451 RWDDAETLRMWMRENN 466
D+ L +M E+N
Sbjct: 544 LVDEGLGLFKFMLEDN 559
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 124/299 (41%), Gaps = 30/299 (10%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +R KL ++ + + N + + ++F++ +N++I NG
Sbjct: 347 LHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGL 406
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
S + ++LF + + P++ T LL A + DL+ + +HG +IRSGF +
Sbjct: 407 SRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATI 466
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y+ CG ++ +F+ + +D + +++W
Sbjct: 467 LIDIYSKCGSLESAHNIFNGIPKKD-----------------------------KDIITW 497
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+ +I+ G G A+ LF +M + +E T ++L C+ G VD G + +
Sbjct: 498 SAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLE 557
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG 318
++D + G L+ A + + + R N W A++ + ELG
Sbjct: 558 DNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELG 616
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 244/441 (55%), Gaps = 35/441 (7%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L S CG+ IK A +F++M V+ + +MI + +G E + ++ ++ G+
Sbjct: 369 LISMYSRCGS---IKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGV 425
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ T+ +L AC L G+ +H +++ +G + +V +Y+ CG + D +
Sbjct: 426 EPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQ 485
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD M +R +V++N MI EA
Sbjct: 486 VFDR-------------------------------MIQRDIVAYNAMIGGYAAHNLGKEA 514
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L+LF ++++ + D+ T + +L CA G+++ + IH+ G + SVGNALV
Sbjct: 515 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDT-SVGNALVS 573
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG A VF+++ ++NV+SWNA+I G A +GRG+ ++L+E+M +GV P+ T
Sbjct: 574 TYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVT 633
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FV +L+ C+HAGL+E+ R F SM+ +I+P +EHYGCMVD+LGR+G + EA LI++M
Sbjct: 634 FVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTM 693
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ N IWG+LL +CR HG+V +AE A + + L+ N+ YV LS++YA G WD A
Sbjct: 694 PFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAA 753
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR M + V K PG+S I+
Sbjct: 754 KLRKLMEQRGVTKEPGRSWIQ 774
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 184/380 (48%), Gaps = 37/380 (9%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + CG+ + + ++F ++ N ++ +N+MI + G EE +++ ++ G+
Sbjct: 268 LVKMYAKCGSYKDCR---QVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGV 324
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P++ T+ LL AC+ L G+ +H + ++GF ++ ++ +Y+ CG + D
Sbjct: 325 MPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARL 384
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD+M +DVI MI G K SG +EA
Sbjct: 385 VFDKMVRKDVISWTAMIGGLAK-------------------------------SGFGAEA 413
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L ++ EM+ E + T ++L C+ A++ G+ IH +GL VGN LV+
Sbjct: 414 LTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD-AHVGNTLVN 472
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y CG + AR VF + ++++V++NAMI G A + G+ ++L++++ +G+ P+K T
Sbjct: 473 MYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVT 532
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
++ +L CA++G +E ARE+ ++ + +V + G +A + M
Sbjct: 533 YINMLNACANSGSLEWAREIH-TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM 591
Query: 397 SIRPNAAIWGSLLSSCRTHG 416
+ R N W +++ HG
Sbjct: 592 TKR-NVISWNAIIGGSAQHG 610
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 213/472 (45%), Gaps = 76/472 (16%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
+N IL + CG++ E A ++F++M SV+ + I Y+ G SE ++F ++
Sbjct: 164 ANCILNMYAK-CGSIEE---AREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G+ P+ T+ +L A L+ G+ VH I+ +G E ++ +V++Y CG
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYK 279
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
D +VF+++ +RD+I N MI G L + G
Sbjct: 280 DCRQVFEKLVNRDLIAWNTMIGG-------------------------------LAEGGY 308
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
EA ++++M+ + ++ T V +L C A+ G+ IHS +G + + V N
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAG-FTSDIGVQN 367
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
AL+ Y +CG + AR VF ++ RK+V+SW AMI GLA +G G + +Y++M GV P
Sbjct: 368 ALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEP 427
Query: 333 NKATFVGVLTCCA----------------HAGL-------------------VEKARELF 357
N+ T+ +L C+ AGL V+ AR++F
Sbjct: 428 NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVF 487
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
M + N G LG+ + +D ++ ++P+ + ++L++C G
Sbjct: 488 DRMIQRDIVAYNAMIGGYAAHNLGKEAL--KLFDRLQEEGLKPDKVTYINMLNACANSGS 545
Query: 418 VELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMRENNV 467
+E A + L+ + S V L + YA+ G + DA + M + NV
Sbjct: 546 LEWARE-IHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNV 596
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 218/487 (44%), Gaps = 78/487 (16%)
Query: 20 QIHAHFLRHKL----HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+H H ++H+ + N ++ ++ CG++ E + K + M +V +N+M+ Y
Sbjct: 44 QVHQHIIQHRTVPDQYTVNALINMYIQ-CGSIEEARQVWKKLSYMER-TVHSWNAMVVGY 101
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
G E+ +KL ++ G+ PD T L +C G L G+ +H + +++G
Sbjct: 102 IQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGL---- 157
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+FD V V N +++ + K G +++ +F +M ++
Sbjct: 158 ---------------------LFD------VKVANCILNMYAKCGSIEEAREVFDKMEKK 190
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
SVVSW + I GR A +F +M + + T ++VL + A+ G+ +H
Sbjct: 191 SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVH 250
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
S ++G + +VG ALV Y KCG R VF+++ +++++WN MI GLA G
Sbjct: 251 SRILNAG-HESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYW 309
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--------FASMTGLHS-- 365
E E+Y QM +GV PNK T+V +L C ++ + +E+ F S G+ +
Sbjct: 310 EEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNAL 369
Query: 366 --------------------IVPNLEHYGCMVDVLGRSGCVREA---YDLIRSMSIRPNA 402
+ ++ + M+ L +SG EA Y ++ + PN
Sbjct: 370 ISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNR 429
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELIN---LEPWNSGNYVLLSNIYAEGGRWDDAETL- 458
+ S+L++C + +E ++++ + GN L N+Y+ G DA +
Sbjct: 430 VTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGN--TLVNMYSMCGSVKDARQVF 487
Query: 459 -RMWMRE 464
RM R+
Sbjct: 488 DRMIQRD 494
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 249/450 (55%), Gaps = 44/450 (9%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA--LLKNL 94
L S CG E++ A +F+++ + +++ + SMI Y N + + LF L++
Sbjct: 193 LVDMYSKCG---ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEES 249
Query: 95 G------IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
G + D +L AC V + + + VHG +I+ GFE
Sbjct: 250 GSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEG--------------- 294
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
D+ V N ++ + K G++ +F M ER V+SWN +I+
Sbjct: 295 ----------------DLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYA 338
Query: 209 KSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
++G +E++ +FH M +D + T+ AVL CA G+ +G+ IH GL V
Sbjct: 339 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 398
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
VG +++D YCKCG ++ AR F + KNV SW+AM++G +G + +E++ +M
Sbjct: 399 F-VGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNM 457
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
GV PN TFV VL C+HAGL+E+ F +M+ + P +EHYGCMVD+LGR+G ++
Sbjct: 458 AGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLK 517
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA+DLI+ M +RP+ +WG+LL +CR H +V+L E + ++L L+P N G YVLLSNIYA
Sbjct: 518 EAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYA 577
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ GRW+D E +R+ M+ + + K PG SL++
Sbjct: 578 DAGRWEDVERMRILMKNSGLVKPPGFSLVD 607
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 195/423 (46%), Gaps = 72/423 (17%)
Query: 54 TKIFNQ-MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
T +FN+ + +V +NS+I + +G S E ++ F+ ++ L + P+ TF +K+C
Sbjct: 105 TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSA 164
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ DL G+ H + + GFE + +V++Y+ CG++ D +FDE+SHR+++ M
Sbjct: 165 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 224
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ + D + L LF+E ++ G G D +D
Sbjct: 225 ITGYVQNDDAHRALLLFKE----------FLVEESGSEG-------------DGEVCVDP 261
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+V+VL C+R+ I + +H + G + + V N L+D Y KCG L +R VF
Sbjct: 262 IAMVSVLSACSRVSEKSITEGVHGFLIKRG-FEGDLGVENTLMDAYAKCGELGVSRRVFD 320
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHA---- 347
+ ++V+SWN++I+ A NG +E++ +M+ G ++ N T VL CAH+
Sbjct: 321 GMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQR 380
Query: 348 -------------------------------GLVEKARELFASMTGLHSIVPNLEHYGCM 376
G VE AR+ F M N++ + M
Sbjct: 381 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE-----KNVKSWSAM 435
Query: 377 VDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKEL---IN 430
V G G +EA ++ M+ ++PN + S+L++C G +E H K + +
Sbjct: 436 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 495
Query: 431 LEP 433
+EP
Sbjct: 496 VEP 498
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ L + + + + +++ A K F++MR +V +++M+ Y ++G
Sbjct: 385 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 444
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-----QCVHGEIIRSGFERFG 135
++E +++F + G+ P+ TF +L AC G L G H + G E +G
Sbjct: 445 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG 504
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCK-KGDVDKGLYLFREMR 193
+ V+L G + + + M R D +V ++ G C+ +VD G R++
Sbjct: 505 CM----VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL-GACRMHKNVDLGEISARKLF 559
Query: 194 E---RSVVSWNLMISSLGKSGR--DSEALRLF 220
E ++ + L+ + +GR D E +R+
Sbjct: 560 ELDPKNCGYYVLLSNIYADAGRWEDVERMRIL 591
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 164/465 (35%), Positives = 258/465 (55%), Gaps = 7/465 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H H LR+ + ++ ++ A K+F++ + FN+MI ++ G
Sbjct: 139 QVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKG 198
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
++F ++ + + PDEYTF LL C + D R+G+ VHG + R G++ +
Sbjct: 199 DVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLL 258
Query: 140 --GVVELYTSCGQMDDGMKVFDEMSHRDVIVR--NLMIHGFCKKGDVDKGLYLFREMRER 195
+V++Y CG++ V + +V ++ + +G+V LF +M ER
Sbjct: 259 VNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGER 318
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
VVSW MIS +G EAL LF ++ + DE VVA L CARLGA+++G+ IH
Sbjct: 319 DVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIH 378
Query: 256 -SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP--RKNVVSWNAMISGLAFN 312
YA + +A+VD Y KCG +D A +VF++ +K +N++ISGLA +
Sbjct: 379 RQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHH 438
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
GRGE L+E+M G+ P+ TFV VL+ C H GLV+ ++LF SM ++ + P +EH
Sbjct: 439 GRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEH 498
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCMVD+LGR+G + EA+ LI M + NA IW +LLS+C+ HG V LA A EL+ L+
Sbjct: 499 YGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQ 558
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ YV+LSN+ ++ + D+A +LR + ++K PG S +E
Sbjct: 559 HDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVE 603
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 212/485 (43%), Gaps = 77/485 (15%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFL---RHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+I LL T QI+AH + RH LH S + + S + + T +F Q
Sbjct: 16 RIKSLLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHT-LFTQ 74
Query: 60 MRNPSVLLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV--GDL 116
+ NP + L+N++IKAYS ++ P + P LF + N + PD +TF LLKAC V
Sbjct: 75 ITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAP 134
Query: 117 RVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
+ G VH ++R+GF + ++ Y G + + KVFDE RD + N MI+GF
Sbjct: 135 QFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGF 194
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
+KGDV S R+F EMR DE T V
Sbjct: 195 ARKGDV-------------------------------SGCFRVFGEMRGVCVRPDEYTFV 223
Query: 237 AVLPICARLGAVDIGQWIHSYAESS-GLYRKVVSVGNALVDFYCKCGIL----------- 284
A+L C+ L IG+ +H G + V + N LVD Y KCG L
Sbjct: 224 ALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVK 283
Query: 285 ----------------------DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
AR +F ++ ++VVSW AMISG + G + +EL+
Sbjct: 284 PGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELF 343
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH-SIVPNLEHYGCMVDVLG 381
++ G+ P++ V L+ CA G +E R + G + + N +VD+
Sbjct: 344 VKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYA 403
Query: 382 RSGCVREAYDLIRSMS-IRPNAAIWGSLLSSCRTHGHVELAEHAVKE--LINLEPWNSGN 438
+ G + A D+ R S + ++ S++S HG E A++ +E L+ L+P N
Sbjct: 404 KCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITF 463
Query: 439 YVLLS 443
+LS
Sbjct: 464 VAVLS 468
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 251/457 (54%), Gaps = 38/457 (8%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F+QM + +N++I ++ NG S + +K+ ++ G P +Y+ L+AC + D
Sbjct: 111 VFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLD 170
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
LR G+ +HG I+ + +R + ++Y CG +D +FD M ++V+ NLMI G
Sbjct: 171 LRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISG 230
Query: 176 FCKKGDVDKGLYLFREMR-----------------------------------ERSVVSW 200
+ K G+ ++ ++LF EM+ ++ + W
Sbjct: 231 YVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICW 290
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
MI ++GR+ +A LF +M + + D T+ +++ CA+L ++ GQ +H
Sbjct: 291 TTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVV 350
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G+ ++ V +ALVD YCKCG+ AR +F+ +P +NV++WNAMI G A NG+ +
Sbjct: 351 MGIDNSML-VSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALT 409
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
LYE+M + P+ TFVGVL+ C +A +V++ ++ F S++ H I P L+HY CM+ +L
Sbjct: 410 LYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISE-HGIAPTLDHYACMITLL 468
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GRSG V +A DLI+ M PN IW +LLS C G ++ AE A L L+P N+G Y+
Sbjct: 469 GRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYI 527
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LSN+YA GRW D +R M+E N KK S +E
Sbjct: 528 MLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVE 564
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 9/275 (3%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ LY G++ D VFD M+ RDV N ++ + K G V+ +F +M R VS+
Sbjct: 64 LLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSY 123
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N +I+ +G +AL++ M++ F+ + + V L C++L + G+ IH
Sbjct: 124 NTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVV 183
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ L V NA+ D Y KCG +D AR +F + KNVVSWN MISG G +
Sbjct: 184 ADLGENTF-VRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIH 242
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ +M G+ P+ T VL G V+ AR LF + I + M+
Sbjct: 243 LFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEIC-----WTTMIVGY 297
Query: 381 GRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSC 412
++G +A+ L M +++P++ S++SSC
Sbjct: 298 AQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
SN++ A+F CG +++ A +F ++ + + +MI Y+ NG E+ LF +
Sbjct: 260 SNVLNAYFR--CGRVDD---ARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDML 314
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+ PD YT + ++ +C + L GQ VHG+++ G + + +V++Y CG
Sbjct: 315 RRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTL 374
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
D +F+ M R+VI N MI G+ + G V
Sbjct: 375 DARVIFETMPIRNVITWNAMILGYAQNGQV------------------------------ 404
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
EAL L+ M+ + F+ D T V VL C V GQ G+ +
Sbjct: 405 -LEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYA- 462
Query: 273 ALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGEL 317
++ + G +D A ++ + +P + N W+ ++S A +G+L
Sbjct: 463 CMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA---KGDL 505
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 50/257 (19%)
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CAR + + S+ E + K + N L+ Y K G L A+NVF + +++V S
Sbjct: 32 CARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYS 91
Query: 302 WNAMISG-------------------------------LAFNGRGELGVELYEQMIAKGV 330
WN ++S A NG +++ +M G
Sbjct: 92 WNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF 151
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMT----GLHSIVPNLEHYGCMVDVLGRSGCV 386
P + + V L C+ + +++ + G ++ V N M D+ + G +
Sbjct: 152 QPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRN-----AMTDMYAKCGDI 206
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE--LINLEPWNSGNYVLLSN 444
+A L M I N W ++S G+ H E L L+P + V +SN
Sbjct: 207 DKARLLFDGM-IDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKP----DLVTVSN 261
Query: 445 I---YAEGGRWDDAETL 458
+ Y GR DDA L
Sbjct: 262 VLNAYFRCGRVDDARNL 278
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 238/422 (56%), Gaps = 9/422 (2%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F++M + +N+MI Y+ G + +LF + D +T+ ++ + G
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGM 281
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
L + E+ + ++ G Y +MD ++F+ M R++ N MI G
Sbjct: 282 LDEAKTFFDEMPEKNEVSYNAMIAG----YVQTKKMDIARELFESMPCRNISSWNTMITG 337
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ + GD+ + F M +R VSW +I+ +SG EAL +F E++ L+ AT
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
L CA + A+++G+ IH A G Y VGNAL+ Y KCG +D A + F+ I
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMG-YGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K+VVSWN M++G A +G G + ++E M GV P++ T VGVL+ C+H GL+++ E
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F SMT + ++P +HY CM+D+LGR+G + EA DLIR+M +P AA WG+LL + R H
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+ EL E A + + +EP NSG YVLLSN+YA GRW DA+ +R MR+ V+K PG S
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636
Query: 476 IE 477
+E
Sbjct: 637 VE 638
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 182/432 (42%), Gaps = 65/432 (15%)
Query: 43 VCGTLNEIKY--ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
+ G L K+ A +F+QM + +N M+ Y N + +LF L+ D
Sbjct: 87 ISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDV 142
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
++ LL G + + E+ + E+ G++ Y G++++ +F+
Sbjct: 143 VSWNSLLSGYAQNGYVDEAR----EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES 198
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
S D+I N ++ GF +K + +LF +M R +SWN MIS + G S+A RLF
Sbjct: 199 KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF 258
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
E + D+ W A+V Y +
Sbjct: 259 DESPTR----------------------DVFTW------------------TAMVSGYVQ 278
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
G+LD A+ F E+P KN VS+NAMI+G + ++ EL+E M + +S ++ +
Sbjct: 279 NGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS----SWNTM 334
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL---IRSMS 397
+T G + +AR+ F M + + ++ +SG EA ++ I+
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCV-----SWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDA 455
N A +G LS+C +EL + + + + + +G +V L +Y + G D+A
Sbjct: 390 ESLNRATFGCALSTCADIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEA 448
Query: 456 ETLRMWMRENNV 467
+ E +V
Sbjct: 449 NDTFEGIEEKDV 460
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 35/318 (11%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G + +I A K F+ M + + ++I Y+ +G EE + +F +K G + TF
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L C + L +G+ +HG+ ++ G+ + ++ +Y CG +D+ F+ + +
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N M+ G+ + G GR +AL +F M+
Sbjct: 459 DVVSWNTMLAGYARHG-----------------------------FGR--QALTVFESMK 487
Query: 225 DQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ DE T+V VL C+ G +D G ++ +S + G+ ++D + G
Sbjct: 488 TAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY-TCMIDLLGRAGR 546
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
L+ A+++ + +P + SW A++ +G ELG E +M+ K N +V +
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG-EKAAEMVFKMEPQNSGMYVLLSN 605
Query: 343 CCAHAGLVEKARELFASM 360
A +G A ++ + M
Sbjct: 606 LYAASGRWVDADKMRSKM 623
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 60/285 (21%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G D + VF+ M R + N MI G+ + + LF +M ER + SWN+M++
Sbjct: 63 GHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYV 122
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ R +A RLF M ++ D+ W
Sbjct: 123 RNCRLGDARRLFDLMPEK----------------------DVVSW--------------- 145
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
N+L+ Y + G +D AR VF +P KN +SWN +++ NGR E L+E
Sbjct: 146 ---NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----- 197
Query: 329 GVSPNKATFVGVLTCCAHAGLVEK-----ARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+K+ + + C G V K AR LF M +I N M+ +
Sbjct: 198 ----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-----TMISGYAQG 248
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
G + +A L R + W +++S +G ++ A+ E+
Sbjct: 249 GGLSQARRLFDESPTR-DVFTWTAMVSGYVQNGMLDEAKTFFDEM 292
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 53/302 (17%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N I + G D L++F M RS VS+N MIS ++ + + A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
++ D+ W N ++ Y + L
Sbjct: 108 ER----------------------DLFSW------------------NVMLTGYVRNCRL 127
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR +F +P K+VVSWN+++SG A NG + E+++ M K N ++ G+L
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAY 183
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H G +E+A LF S + +L + C++ R + +A L M +R +A
Sbjct: 184 VHNGRIEEACLLFESKSDW-----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAIS 237
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W +++S G + A E + + + + + Y + G D+A+T M E
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVF---TWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 465 NN 466
N
Sbjct: 295 KN 296
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 38/132 (28%)
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+ GL++ E F M +S+ P +HY CM+D+LGR + E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
G+LL + R HG+ EL E A + + P NSG +S MR+
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG----ISK-----------------MRDV 857
Query: 466 NVKKSPGQSLIE 477
V+K PG S E
Sbjct: 858 GVQKVPGYSWFE 869
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +LA + CG+++E A F + V+ +N+M+ Y+ +G + + +F +K
Sbjct: 433 NALLAMYFK-CGSIDE---ANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-----VVELYTSC 148
G+ PDE T +L AC G L G E S + +G I +++L
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGT----EYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 149 GQMDDGMKVFDEMSHRD------VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL 202
G++++ + M + ++ IHG + G +K + +M ++ + L
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG--EKAAEMVFKMEPQNSGMYVL 602
Query: 203 MISSLGKSGRDSEALRLFHEMRD 225
+ + SGR +A ++ +MRD
Sbjct: 603 LSNLYAASGRWVDADKMRSKMRD 625
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 224/387 (57%), Gaps = 7/387 (1%)
Query: 96 IWPDEYTFAPLLKACL---GVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQ 150
+ P+ T LL AC + G +H + GF + +G ++++Y CG+
Sbjct: 83 VEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFA-MNDVMVGTALIDMYAKCGK 141
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+D VFD+M R+++ N MI G+ K GDVD L LF ++ ++VVSW ++I K
Sbjct: 142 LDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKK 201
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
EAL F EM+ D TV+A++ CA LGA+ +G W+H +R V V
Sbjct: 202 ECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKE-FRDNVKV 260
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
N+L+D Y +CG ++ AR VF + ++N+VSWN++I G A NG + + + M +G+
Sbjct: 261 LNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGL 320
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
PN ++ LT C+HAGL+++ ++FA + H P +EHYGC+VD+ R+G ++EA+
Sbjct: 321 EPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAW 380
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
D+I+ M + PN + GSLL++CRT G VELAE +K + L P NYVL SNIYA G
Sbjct: 381 DVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVG 440
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+WD A +R M+E ++K+ S IE
Sbjct: 441 KWDGASKVRREMKERGLQKNLAFSSIE 467
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 77/354 (21%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+ + T +H H +H ++++ L + CG L+ YA +F+QM +++
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLD---YARLVFDQMGVRNLVS 159
Query: 68 FNSMIKAYSLNGPSEEPVKLFALL--KNL-----------------------------GI 96
+N+MI Y NG ++ +KLF L KN+ G+
Sbjct: 160 WNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGV 219
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD T ++ AC +G L +G VH +++ F + ++++Y CG ++ +
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD MS R+++ N +I GF G DK L FR M++
Sbjct: 280 VFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKK---------------------- 317
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ E + + + L C+ G +D G I + + + LVD
Sbjct: 318 ---------EGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVD 368
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELG-------VELY 322
Y + G L A +V K++P N V ++++ G EL VELY
Sbjct: 369 LYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELY 422
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 257/433 (59%), Gaps = 7/433 (1%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLL 107
+ + A F +M + ++ +NSMI YS G + E + +F+ +L + PD +T A +L
Sbjct: 223 QFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASIL 282
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD--EMSHRD 165
AC + L +G+ +H I+R+ E G++ ++ +Y G ++ + + S+ +
Sbjct: 283 SACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLN 342
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+I ++ G+ K G+V +F ++R+R VV+W MI ++G ++AL LF M +
Sbjct: 343 IIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVN 402
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ E + T+ A+L + + L ++ G+ IH+ A +G SV NAL+ Y K G ++
Sbjct: 403 EGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG-ESSTPSVTNALIAMYAKTGNIN 461
Query: 286 TARNVFKEIP--RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
A+ VF ++P +K +VSW +MI LA +G G+ + L+E+M++ G+ P+ T+VGVL+
Sbjct: 462 VAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C H GLVE+ R+ + MT +H I P L HY CM+D+ GR+G ++EAY I SM I P+
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
WGSLL+SC+ H + +LA+ A + L+ ++P NSG Y+ L+N+Y+ G+W++A R M+
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 464 ENNVKKSPGQSLI 476
+ V+K G S I
Sbjct: 641 DRGVRKEKGISWI 653
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 233/543 (42%), Gaps = 116/543 (21%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG- 79
+H ++ LH ++ + ++ +++A +F++M S +N++I Y+ G
Sbjct: 32 VHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGN 91
Query: 80 -----------PSEEPVKL---------FALLKNLGIW-----------PDEYTFAPLLK 108
P +PV F L N IW P ++T + +L
Sbjct: 92 FEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDN-AIWMFAKMISERVPPSQFTVSNVLS 150
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+C L +G+ +H +++ G + ++ +Y CG VFD M+ +++
Sbjct: 151 SCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIST 210
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-A 227
N +I + + G + F +M +R +VSWN MIS + G + EAL +F +M ++ +
Sbjct: 211 WNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPS 270
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSY-----AESSGLYRKVVSVGNALVDFYCKCG 282
+ D T+ ++L CA L ++IG+ IH+Y E+SG +VGNAL+ Y K G
Sbjct: 271 LKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSG------AVGNALISMYAKSG 324
Query: 283 ------------------------ILD---------TARNVFKEIPRKNVVSWNAMISGL 309
+LD AR +F ++ ++VV+W AMI G
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGY 384
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--------- 360
NG +EL+ M+ +G PN T +L+ + ++E +++ AS
Sbjct: 385 VQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP 444
Query: 361 ------------TGLHSI------VPN----LEHYGCMVDVLGRSGCVREAYDLIR---S 395
TG ++ +PN + + M+ L + G +EA +L S
Sbjct: 445 SVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLS 504
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAE---HAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
+ ++P+ + +LS+C G VE + + E+ +EP S +Y + ++Y G
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLS-HYACMIDLYGRAGLL 563
Query: 453 DDA 455
+A
Sbjct: 564 QEA 566
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 39/396 (9%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
FA +L+ + + D G+ VH +II+ G + ++ Y G + VFDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
+ N +I G+ K+G+ + L EM + VSW +I + G A+ +F +
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M + + TV VL CA +DIG+ IHS+ GL V V +L++ Y KCG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGL-GSCVPVATSLLNMYAKCG 191
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
A+ VF + KN+ +WNA+IS +G+ EL +E+M + + ++ +++
Sbjct: 192 DPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI----VSWNSMIS 247
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV---LGRSGCVREAYDLIRSMSIR 399
+ G +A +F+ M S+ P+ ++ L + ++ + I
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307
Query: 400 PNAAIWGSLLSSCRTHGHVELA----EHAVKELINLEPWNS--GNYVLLSNI-------- 445
+ A+ +L+S G VE+A EH +N+ + S Y L N+
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367
Query: 446 ----------------YAEGGRWDDA-ETLRMWMRE 464
Y + G W+DA E R+ + E
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNE 403
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 225/391 (57%), Gaps = 5/391 (1%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
+L+N G PD Y+F +LKAC + L G+ +H ++ G ++ ++ ++SCG
Sbjct: 1 MLRN-GTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCG 59
Query: 150 QMDDGMKVFDEMSH--RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
++ VFD + RDV+ N MI G+ + + L +F + R+ V W MI+
Sbjct: 60 AVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGY 119
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+S EA+ LF EM+ F D AT+ VL C GA+ G+WIH Y E + + +
Sbjct: 120 AQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDL 179
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM-I 326
+ NAL+ Y KCG + A +F + + ++ SW+A+ISGLA NG + + L+ QM +
Sbjct: 180 -NARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEM 238
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+ PN+ TF+GVL C H G V+K F +MT ++++ P +EHYGCMVD+LGR+ +
Sbjct: 239 ISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL 298
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
EA IR++ I+P+ IW SLL +CR HG++ELAE A K++ LEP G VLLSN+Y
Sbjct: 299 VEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVY 358
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A RW D + +R M +KK PG S +E
Sbjct: 359 ASASRWGDVKRVRKDMATQRIKKQPGCSFVE 389
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 41/286 (14%)
Query: 43 VCGTLNEIKY--ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
+ G L +Y A K+F+++ + + + + SMI Y+ + +E ++LF ++ G D
Sbjct: 85 ISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADA 144
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
T A +L AC G L G+ +H R+ E + R ++ +Y+ CG + +++F
Sbjct: 145 ATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHG 204
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
++ D+ + +I G G+ DK L+LF +M MIS +
Sbjct: 205 LTQPDIFSWSAVISGLAMNGESDKALHLFSQME---------MISDIRP----------- 244
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN--ALVDFY 278
+E T + VL C G VD G ++ + + +Y + + +VD
Sbjct: 245 ----------NEITFLGVLCACNHGGFVDKG--LYYFNAMTQIYNLTPGIEHYGCMVDLL 292
Query: 279 CKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYE 323
+ +L A + +P + +VV W +++ F R +EL E
Sbjct: 293 GRANLLVEAEKFIRTLPIQPDVVIWRSLL----FACRNHGNIELAE 334
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 23/255 (9%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDE 100
S CG +I+ A +IF+ + P + ++++I ++NG S++ + LF+ ++ + I P+E
Sbjct: 190 SKCG---DIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 246
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIR-----SGFERFGSIRIGVVELYTSCGQMDDGM 155
TF +L AC G + G + + G E +G + V+L + +
Sbjct: 247 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCM----VDLLGRANLLVEAE 302
Query: 156 KVFDEMS-HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE---RSVVSWNLMISSLGKSG 211
K + DV++ ++ G+++ + +++ E R + L+ + +
Sbjct: 303 KFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASAS 362
Query: 212 RDSEALRLFHEMRDQAFELDEA-TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
R + R+ +M Q + + V + + L D S+ E +Y ++S+
Sbjct: 363 RWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVAD-----RSHPEMGAIYETMISI 417
Query: 271 GNALVDFYCKCGILD 285
AL GILD
Sbjct: 418 NKALQSKGFDPGILD 432
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 262/480 (54%), Gaps = 16/480 (3%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVL 66
LLH HL F KL Q ++ + +S +K ++F Q R+ V
Sbjct: 115 LLHMYVQFDHLKDARNVF--DKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVE 172
Query: 67 L----FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV---G 119
L +N MI ++ +G + V +F + G+ PD + + +L A VGDL + G
Sbjct: 173 LNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA---VGDLDMPLMG 229
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+H +I+ G + ++++Y C + VF+EM DV N ++ G +
Sbjct: 230 IQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRN 289
Query: 180 GDVDKGLYLFREMR--ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
G VD L +F++ + + +VVSW MI+S ++G+D EAL LF EM+ + + + T+
Sbjct: 290 GLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPC 349
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+LP C + A+ G+ H ++ +G++ V VG+AL+D Y KCG + +R F +P +
Sbjct: 350 LLPACGNIAALLHGKAAHCFSLRNGIFNDVY-VGSALIDMYAKCGRMLASRLCFDMMPNR 408
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
N+VSWN++++G A +G+ + ++E M G P+ +F VL+ C GL E+ F
Sbjct: 409 NLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYF 468
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM+ H + +EHY CMV +LGRSG + EAY +I+ M P++ +WG+LLSSCR H
Sbjct: 469 DSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNR 528
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+L E A K + LEP N GNY+LLSNIYA W + + +R MR +KK+PG S IE
Sbjct: 529 VDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIE 588
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 145/301 (48%), Gaps = 8/301 (2%)
Query: 85 VKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
+++F+ + GI PD ++K C + L+ G+ +H + SG + ++ +
Sbjct: 59 IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSW 200
Y + D VFD++ V+ + +I F +KG V + LF + R E ++VSW
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N MIS +SG +A+ +F M + + D +V +VLP L +G IH Y
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
GL V +AL+D Y KC VF E+ +V + NA+++GL+ NG + +E
Sbjct: 239 QGLGPDKFVV-SALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
+++Q KG+ N ++ ++ C+ G +A ELF M + + PN C++
Sbjct: 298 VFKQF--KGMDLNVVSWTSMIASCSQNGKDMEALELFREMQ-IEGVKPNSVTIPCLLPAC 354
Query: 381 G 381
G
Sbjct: 355 G 355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 94/248 (37%), Gaps = 71/248 (28%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I LLHG+ H LR+ + + + + + + + F+ M N +
Sbjct: 357 IAALLHGKAA-------HCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRN 409
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++ +NS++ Y+++G + E + +F L++ G PD +F +L AC
Sbjct: 410 LVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSAC-------------- 455
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
T G ++G FD MS RN HG
Sbjct: 456 ---------------------TQGGLTEEGWFYFDSMS------RN---HGV-------- 477
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
E + ++ M++ LG+SGR EA + +M FE D A+L C
Sbjct: 478 ---------EARMEHYSCMVTLLGRSGRLEEAYAMIKQM---PFEPDSCVWGALLSSCRV 525
Query: 245 LGAVDIGQ 252
VD+G+
Sbjct: 526 HNRVDLGE 533
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 251/440 (57%), Gaps = 20/440 (4%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL----KNLGIWPD 99
CG L A ++F++M + FNSMI Y +G + +LF ++ KNL W
Sbjct: 170 CGCLG---IARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISW-- 224
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+ ++ G LRV + E+ + + S+ G V+ CG+M++ +F+
Sbjct: 225 NSMISGYARSEEG---LRVAWELFEEMPKRDLISWNSMIDGCVK----CGKMENAHHLFN 277
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+M RDV+ M+ G+ K G++D LF EM ER V+S N M++ ++G EAL
Sbjct: 278 QMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNF 337
Query: 220 FHEM--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
FH+M R + F D AT++ L A+LG D G +H Y E +G + +G AL+D
Sbjct: 338 FHDMLSRKELFP-DNATLLITLSAIAQLGHFDEGVALHCYIEDNG-FSLSEKLGVALIDM 395
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y KCG +D A +VF++I K++ WNA+I GLA +G GE+ EL+ +M V P+ TF
Sbjct: 396 YAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITF 455
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL C HAGLV++ F M +H + P L+HYGCMVD+LGR+G V EA + M
Sbjct: 456 IGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMP 515
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
I PN +W +LLS+CR H + + E K LI+++ +N +YVLLSNIYA G W+D
Sbjct: 516 IEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYR 575
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+RM M++ ++KK PG S IE
Sbjct: 576 IRMMMKQRDLKKIPGCSQIE 595
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 183/379 (48%), Gaps = 27/379 (7%)
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
NP L+N++IK++S E +F L+ G+ D+++F+ +LKAC +G ++ G
Sbjct: 86 NP--FLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQ 143
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG + R ++ ++ LY CG + ++FD M RD + N MI G+ K G
Sbjct: 144 IHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGM 203
Query: 182 VDKGLYLFR--EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
V LF M +++++SWN MIS +S E LR+ E+ ++ + D + +++
Sbjct: 204 VKSARELFDVMPMEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNSMI 260
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C + G ++ + + R VVS N +VD Y K G +D AR +F E+P ++V
Sbjct: 261 DGCVKCGKMENAHHLFNQMPK----RDVVSWAN-MVDGYAKLGEIDIARGLFDEMPERDV 315
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+S NAM++G NG + + M++ K + P+ AT + L+ A G ++
Sbjct: 316 ISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEG----- 370
Query: 359 SMTGLHSIVPN-----LEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
LH + + E G ++D+ + G + A + + + + W +++
Sbjct: 371 --VALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDK-SIDHWNAIIGGL 427
Query: 413 RTHGHVELAEHAVKELINL 431
HG E+A E+ L
Sbjct: 428 AIHGLGEVAFELFMEMEKL 446
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 148/455 (32%), Positives = 251/455 (55%), Gaps = 33/455 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H +++ LH I +++ ++K A +F +M + + +++ SMI Y N
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E + L+ ++ G PDE T A L+ AC + DL VG +H I + +
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+V +Y CG + +VFD+ + ++ V +W
Sbjct: 221 LVNMYAKCGDLKTARQVFDK-------------------------------LSDKDVYAW 249
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+ +I K+ R +EAL+LF E+ + +E T++AV+ CA+LG ++ G+W+H Y
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V S+ N+L+D + KCG +D A+ +F + K+++SWN+M++G A +G G +
Sbjct: 310 RTQKGHSV-SLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREAL 368
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ M + P++ TF+GVLT C+HAGLV++ ++LF + L+ + EHYGCMVD+
Sbjct: 369 AQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDL 428
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R+G + EA + IR M ++P+ AIWGS+L +CR + ++EL E A + L+ LEP N G Y
Sbjct: 429 LCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVY 488
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+LLSNIYA+ W++ + +R M E ++K+PG S
Sbjct: 489 ILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCS 523
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 49/417 (11%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY-SLNGPSEE 83
F+ HK + LI AH +S+ G+L + YA +F R VL +NSM++A+ + N P
Sbjct: 6 FIHHKPSLNKLI-AHVLSM-GSLG-VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRA 62
Query: 84 PVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVE 143
+L+ PD +TF LLK C + + +VG+ +HG++++ I ++
Sbjct: 63 LQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLN 122
Query: 144 LYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLM 203
+Y +CG + +F+ M HR+ +V MI G+ K ++ L L+++M E
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEE--------- 173
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
F DE T+ ++ CA L + +G +HS+ +
Sbjct: 174 ----------------------DGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211
Query: 264 YRKVVSV-GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
K+ +V G+ALV+ Y KCG L TAR VF ++ K+V +W+A+I G N R ++L+
Sbjct: 212 --KICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269
Query: 323 EQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL---HSIVPNLEHYGCMVD 378
++ + PN+ T + V++ CA G +E R + +T HS+ N ++D
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN----NSLID 325
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH--GHVELAEHAVKELINLEP 433
+ + G + A + SMS + + W S+++ H G LA+ + + +L+P
Sbjct: 326 MFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQP 381
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 254/484 (52%), Gaps = 12/484 (2%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHK---LHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
++++ L R HL+ H L K LH + +S G L +A +F++M
Sbjct: 13 RLIKSLSPATPRAHLSASGIHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEM 72
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-- 118
N S++ +M +A++++G + + + LF + G PD A +L AC G G
Sbjct: 73 PNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMPDNVALAVVLAACHGAGSCTARR 132
Query: 119 --GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF 176
G+ VH I+ G E + ++ +Y G+M +VFD M + I N M+H +
Sbjct: 133 SPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQY 192
Query: 177 CKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA---FELDEA 233
+ D++ LF M R VVSWN +I+ GR EAL LF +M + +
Sbjct: 193 VRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGP 252
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T+ VL CA G ++ G W+H Y + + + ++ L+D Y KCG +D A VF++
Sbjct: 253 TMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNG-TLDRCLIDMYAKCGSIDKALQVFEK 311
Query: 294 IP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
P ++++ SW +I GLA +GR + ++ M G+ P+ TFVGVL CAH GLV++
Sbjct: 312 APGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDE 371
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F SM + I P +EHYGCM+D+LGR G + EAY +I++M ++PN IWG+ LS+C
Sbjct: 372 GLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSAC 431
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ H VEL E A E+ L+P + V++S++YA+ W R M +KK+PG
Sbjct: 432 KVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPG 491
Query: 473 QSLI 476
S +
Sbjct: 492 CSSV 495
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/458 (34%), Positives = 236/458 (51%), Gaps = 32/458 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH ++ + + + + + E+ A I ++R V+ + +MI Y+ +
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E +KLF ++N GI D F+ + AC G+ L GQ +H + SG+ SI
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGN 555
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V LY CG+ D F+++ +D I S
Sbjct: 556 ALVSLYARCGRAQDAYLAFEKIDAKDNI-------------------------------S 584
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +IS +SG EAL++F +M E + T + + A + G+ IH+
Sbjct: 585 WNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMI 644
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+G Y N L+ Y KCG ++ A+ F E+P KNVVSWNAMI+G + +G G V
Sbjct: 645 KTG-YDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAV 703
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+E+M G+ PN TFVGVL+ C+H GLV + F SM+ H +VP EHY C+VD+
Sbjct: 704 SLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDL 763
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+ + A + I M I P+A IW +LLS+C H ++E+ E A + L+ LEP +S Y
Sbjct: 764 LGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATY 823
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSN+YA G+WD + R M++ VKK PG+S IE
Sbjct: 824 VLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIE 861
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 213/484 (44%), Gaps = 69/484 (14%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA + +++ + + + E+ A K+F+ + + +V +N +I
Sbjct: 31 KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKK 90
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACL-GVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + + LF+L+ + PDE TFA +L+AC G +V + +H +II GF +
Sbjct: 91 LASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVC 150
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+++LY+ G +D VF+ + +D + MI G + G D+ + LF +M + +V+
Sbjct: 151 NPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+ SS VL C ++ +G+ +H +
Sbjct: 211 PTPYVFSS-------------------------------VLSACTKIELFKLGEQLHGFI 239
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL + V NALV Y + G L A +F ++ R++ +S+N++ISGLA G +
Sbjct: 240 VKWGLSSETF-VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG---------------- 362
++L+E+M + P+ T +L+ CA G K ++L + +
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358
Query: 363 --------------LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR---PNAAIW 405
L + N+ + M+ G+ G + E+Y + M I PN +
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMR 463
S+L +C + G ++L E ++I + YV +L ++YA+ G D A + +R
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 464 ENNV 467
E +V
Sbjct: 478 EEDV 481
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 185/431 (42%), Gaps = 43/431 (9%)
Query: 5 ILRLLHGRNTRTHLT-QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
+LR G +T QIHA + H S L+ + + + A +F ++
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK 176
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ + +MI S NG +E + LF + + P Y F+ +L AC + ++G+ +H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G I++ G + +V LY+ G + ++F +M RD I N +I G ++G D
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ AL+LF +M+ + D TV ++L CA
Sbjct: 297 R-------------------------------ALQLFEKMQLDCMKPDCVTVASLLSACA 325
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+GA G+ +HSY G+ ++ G +L+D Y KC ++TA F +NVV WN
Sbjct: 326 SVGAGYKGKQLHSYVIKMGMSSDLIIEG-SLLDLYVKCFDIETAHEYFLTTETENVVLWN 384
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--T 361
M+ G ++ QM +G+ PN+ T+ +L C G ++ ++ + +
Sbjct: 385 VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS 444
Query: 362 GLHSIVPNLEHYGC--MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
G V Y C ++D+ + G + A +++ + + W ++++ H
Sbjct: 445 GFQFNV-----YVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQHDLFA 498
Query: 420 LAEHAVKELIN 430
A +E+ N
Sbjct: 499 EALKLFQEMEN 509
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 148/360 (41%), Gaps = 66/360 (18%)
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
++ GI + T+ L + C G L + +H I +SGF+ + ++++Y + G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+D+ +K+FD++ +V WN +IS L
Sbjct: 61 VDNAIKLFDDIPSSNVSF-------------------------------WNKVISGLLAK 89
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA-VDIGQWIHSYAESSGLYRKVVS 269
S+ L LF M + DE+T +VL C+ A + + IH+ G +
Sbjct: 90 KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPL- 148
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
V N L+D Y K G +D A+ VF+ + K+ VSW AMISGL+ NGR + + L+ QM
Sbjct: 149 VCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFA---------------SMTGLHSIVPNL---- 370
V P F VL+ C L + +L ++ L+S NL
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE 268
Query: 371 -----------EHYGCMVDVLGRSGCVREAYDLIRSMSI---RPNAAIWGSLLSSCRTHG 416
Y ++ L + G A L M + +P+ SLLS+C + G
Sbjct: 269 QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 247/438 (56%), Gaps = 35/438 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
V++ G E A ++F++M + V+ + +++ A+ G E L+ + + P+
Sbjct: 154 LVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEA---LVLVGQMDVVPN 210
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E T A +L AC +G R G+ VHG +R + + V+++Y C ++D +VFD
Sbjct: 211 EGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKLIVGNAVLDMYVKCEKLDLARRVFD 270
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+ RDVI SW +MIS L + S+AL +
Sbjct: 271 RLLVRDVI-------------------------------SWTIMISGLVQCKLPSKALEV 299
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F+EM+ + D+ + VL C LGA++ G+W+H Y E G+ V VG +LVD Y
Sbjct: 300 FNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDV-HVGTSLVDMYA 358
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG L+T+ ++F+++P KN+ SWNA+I+G A +G G +E +++M+A G++PN+ +F+
Sbjct: 359 KCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFII 418
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL C H+GLV++ +LF SM + + P EHYG +VD+LGR+G + EAY + ++M +R
Sbjct: 419 VLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMR 478
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
P WG+LLS+C+ H V+ ++ ++ + LE SG Y LLSNIYA RW D + +R
Sbjct: 479 PAVFTWGALLSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVR 538
Query: 460 MWMRENNVKKSPGQSLIE 477
M E ++K PG S+IE
Sbjct: 539 GLMSEKGLQKEPGSSVIE 556
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 175/395 (44%), Gaps = 54/395 (13%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
+LAHF + A ++R S FN++I +L+G + FA L G
Sbjct: 40 VLAHFARHLASARAPADAVHALLRLR-ASAHPFNALISHLTLSGEPSSAFRTFAALLAAG 98
Query: 96 IW----PDEYTFAPLLKACLGVGDLRV------GQCVHGEIIRSGFERFGSIRIGVVELY 145
PD YT LKAC +G G+ VH + GF +R +V LY
Sbjct: 99 RGEPRRPDGYTLPATLKACARLGAGGDDGGLREGRQVHAVAEKGGFLGRLPVRNALVTLY 158
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
CG+ D +VFDEM+ RDV VSW ++S
Sbjct: 159 GVCGECGDARRVFDEMASRDV-------------------------------VSWTALVS 187
Query: 206 SLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYR 265
+ + GR +EAL L +M +E T+ VL C RLGA G+ +H +
Sbjct: 188 AFVRGGRFAEALVLVGQMD---VVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDL 244
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
K++ VGNA++D Y KC LD AR VF + ++V+SW MISGL +E++ +M
Sbjct: 245 KLI-VGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEM 303
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGC-MVDVLGR 382
V P+K VL+ C G +E R + + G+ V H G +VD+ +
Sbjct: 304 QKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDV----HVGTSLVDMYAK 359
Query: 383 SGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
GC+ + + R M ++ N + W +L++ HGH
Sbjct: 360 CGCLETSLSIFRKMPLK-NLSSWNALINGFALHGH 393
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 126/297 (42%), Gaps = 48/297 (16%)
Query: 21 IHAHFLRH----KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+H +LR KL N +L +V ++ A ++F+++ V+ + MI
Sbjct: 233 VHGWYLRRESDLKLIVGNAVLDMYVKC----EKLDLARRVFDRLLVRDVISWTIMISGLV 288
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ +++F ++ + PD+ + +L AC +G L G+ VH I R G E
Sbjct: 289 QCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVH 348
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +V++Y CG ++ + +F +M +++ N +I+GF G + L F M
Sbjct: 349 VGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASG 408
Query: 197 V----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ VS+ +++ + SG E L+LF M++ + +
Sbjct: 409 LAPNEVSFIIVLGACCHSGLVQEGLQLFESMKN---------------------SYKLSP 447
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISG 308
W Y ++VD + G++ A +V K +P R V +W A++S
Sbjct: 448 WEEHY--------------GSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSA 490
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 238/422 (56%), Gaps = 9/422 (2%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F++M + +N+MI Y+ G + +LF + D +T+ ++ + G
Sbjct: 226 LFDKMPVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGM 281
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
L + E+ + ++ G Y +MD ++F+ M R++ N MI G
Sbjct: 282 LDEAKTFFDEMPEKNEVSYNAMIAG----YVQTKKMDIARELFESMPCRNISSWNTMITG 337
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ + GD+ + F M +R VSW +I+ +SG EAL +F E++ L+ AT
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
L CA + A+++G+ IH A G Y VGNAL+ Y KCG +D A + F+ I
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMG-YGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K+VVSWN M++G A +G G + ++E M GV P++ T VGVL+ C+H GL+++ E
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F SMT + ++P +HY CM+D+LGR+G + EA DLIR+M +P AA WG+LL + R H
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G+ EL E A + + +EP NSG YVLLSN+YA GRW DA+ +R MR+ V+K PG S
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636
Query: 476 IE 477
+E
Sbjct: 637 VE 638
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 182/432 (42%), Gaps = 65/432 (15%)
Query: 43 VCGTLNEIKY--ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
+ G L K+ A +F+QM + +N M+ Y N + +LF L+ D
Sbjct: 87 ISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDV 142
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
++ LL G + + E+ + E+ G++ Y G++++ +F+
Sbjct: 143 VSWNSLLSGYAQNGYVDEAR----EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES 198
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
S D+I N ++ GF +K + +LF +M R +SWN MIS + G S+A RLF
Sbjct: 199 KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF 258
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
E + D+ W A+V Y +
Sbjct: 259 DESPTR----------------------DVFTW------------------TAMVSGYVQ 278
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
G+LD A+ F E+P KN VS+NAMI+G + ++ EL+E M + +S ++ +
Sbjct: 279 NGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS----SWNTM 334
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL---IRSMS 397
+T G + +AR+ F M + + ++ +SG EA ++ I+
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCV-----SWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDA 455
N A +G LS+C +EL + + + + + +G +V L +Y + G D+A
Sbjct: 390 ESLNRATFGCALSTCADIAALELGKQIHGQAVKM-GYGTGCFVGNALLAMYFKCGSIDEA 448
Query: 456 ETLRMWMRENNV 467
+ E +V
Sbjct: 449 NDTFEGIEEKDV 460
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 35/318 (11%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G + +I A K F+ M + + ++I Y+ +G EE + +F +K G + TF
Sbjct: 339 GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFG 398
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
L C + L +G+ +HG+ ++ G+ + ++ +Y CG +D+ F+ + +
Sbjct: 399 CALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK 458
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DV+ N M+ G+ + G GR +AL +F M+
Sbjct: 459 DVVSWNTMLAGYARHG-----------------------------FGR--QALTVFESMK 487
Query: 225 DQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ DE T+V VL C+ G +D G ++ +S + G+ ++D + G
Sbjct: 488 TAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY-TCMIDLLGRAGR 546
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
L+ A+++ + +P + SW A++ +G ELG E +M+ K N +V +
Sbjct: 547 LEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG-EKAAEMVFKMEPQNSGMYVLLSN 605
Query: 343 CCAHAGLVEKARELFASM 360
A +G A ++ + M
Sbjct: 606 LYAASGRWVDADKMRSKM 623
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 60/285 (21%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G D + VF+ M R + N MI G+ + + LF +M ER + SWN+M++
Sbjct: 63 GHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYV 122
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ R +A RLF M ++ D+ W
Sbjct: 123 RNCRLGDARRLFDLMPEK----------------------DVVSW--------------- 145
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
N+L+ Y + G +D AR VF +P KN +SWN +++ NGR E L+E
Sbjct: 146 ---NSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE----- 197
Query: 329 GVSPNKATFVGVLTCCAHAGLVEK-----ARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+K+ + + C G V K AR LF M +I N M+ +
Sbjct: 198 ----SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWN-----TMISGYAQG 248
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
G + +A L R + W +++S +G ++ A+ E+
Sbjct: 249 GGLSQARRLFDESPTR-DVFTWTAMVSGYVQNGMLDEAKTFFDEM 292
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 127/302 (42%), Gaps = 53/302 (17%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N I + G D L++F M RS VS+N MIS ++ + + A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
++ D+ W N ++ Y + L
Sbjct: 108 ER----------------------DLFSW------------------NVMLTGYVRNCRL 127
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR +F +P K+VVSWN+++SG A NG + E+++ M K N ++ G+L
Sbjct: 128 GDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAAY 183
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H G +E+A LF S + +L + C++ R + +A L M +R +A
Sbjct: 184 VHNGRIEEACLLFESKSDW-----DLISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAIS 237
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W +++S G + A E + + + + + Y + G D+A+T M E
Sbjct: 238 WNTMISGYAQGGGLSQARRLFDESPTRDVF---TWTAMVSGYVQNGMLDEAKTFFDEMPE 294
Query: 465 NN 466
N
Sbjct: 295 KN 296
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +LA + CG+++E A F + V+ +N+M+ Y+ +G + + +F +K
Sbjct: 433 NALLAMYFK-CGSIDE---ANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKT 488
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-----VVELYTSC 148
G+ PDE T +L AC G L G E S + +G I +++L
Sbjct: 489 AGVKPDEITMVGVLSACSHTGLLDRGT----EYFYSMTKDYGVIPTSKHYTCMIDLLGRA 544
Query: 149 GQMDDGMKVFDEMSHRD------VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL 202
G++++ + M + ++ IHG + G +K + +M ++ + L
Sbjct: 545 GRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG--EKAAEMVFKMEPQNSGMYVL 602
Query: 203 MISSLGKSGRDSEALRLFHEMRD 225
+ + SGR +A ++ +MRD
Sbjct: 603 LSNLYAASGRWVDADKMRSKMRD 625
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/471 (34%), Positives = 253/471 (53%), Gaps = 45/471 (9%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
R LHG+ + A F R + + L+ S CG LN+ A + F +M +V+
Sbjct: 674 RALHGQGVK-------ACFSREVMFNNTLL--DMYSKCGNLND---AIQAFEKMGQKTVV 721
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ S+I AY G ++ ++LF +++ G+ PD Y+ +L AC L G+ VH I
Sbjct: 722 SWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYI 781
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
++ + ++++Y CG M++ V
Sbjct: 782 RKNNMALCLPVSNALMDMYAKCGSMEEAYLV----------------------------- 812
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
F ++ + +VSWN MI K+ +EAL+LF EM+ ++ D T+ +LP C L
Sbjct: 813 --FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLA 869
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A++IG+ IH +G Y + V NAL+D Y KCG L AR +F IP K++++W MI
Sbjct: 870 ALEIGRGIHGCILRNG-YSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMI 928
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
SG +G G + +++M G+ P++ TF +L C+H+GL+ + F SM ++
Sbjct: 929 SGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNM 988
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P LEHY CMVD+L R+G + +AY+LI +M I+P+A IWG+LL CR H VELAE +
Sbjct: 989 EPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAE 1048
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ LEP N+G YVLL+NIYAE +W++ + LR + + +KKSPG S IE
Sbjct: 1049 HVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIE 1099
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 180/369 (48%), Gaps = 42/369 (11%)
Query: 44 CGTLNEIKYATKIFNQ-MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
CG L E +IF+ + + V L+N M+ Y+ G E + LF ++ LGI + YT
Sbjct: 499 CGALRE---GRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYT 555
Query: 103 FAPLLKACLGVGDLRVGQC--VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
F+ +LK +G RVG+C +HG + + GF + ++ ++ Y G++D K+FDE
Sbjct: 556 FSCILKCFATLG--RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDE 613
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
+ RDV+ SWN MIS +G AL F
Sbjct: 614 LGDRDVV-------------------------------SWNSMISGCVMNGFSHSALEFF 642
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M +D AT+V + CA +G++ +G+ +H + R+V+ N L+D Y K
Sbjct: 643 VQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVM-FNNTLLDMYSK 701
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG L+ A F+++ +K VVSW ++I+ G + + L+ +M +KGVSP+ + V
Sbjct: 702 CGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSV 761
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L CA ++K R++ + +++ L ++D+ + G + EAY + + ++
Sbjct: 762 LHACACGNSLDKGRDVHNYIRK-NNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK- 819
Query: 401 NAAIWGSLL 409
+ W +++
Sbjct: 820 DIVSWNTMI 828
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 180/403 (44%), Gaps = 47/403 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH + N ++ ++ E+ A K+F+++ + V+ +NSMI +NG
Sbjct: 574 RIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNG 633
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
S ++ F + L + D T + AC VG L +G+ +HG+ +++ F R
Sbjct: 634 FSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNN 693
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y+ CG ++D ++ F++M + V+ +I + ++G D + LF EM + V
Sbjct: 694 TLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSP 753
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
D ++ +VL CA ++D G+ +H+Y
Sbjct: 754 -------------------------------DVYSMTSVLHACACGNSLDKGRDVHNYIR 782
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + + V NAL+D Y KCG ++ A VF +IP K++VSWN MI G + N +
Sbjct: 783 KNNMAL-CLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEAL 841
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV------PNLEHY 373
+L+ +M K P+ T +L C +E R G+H + L
Sbjct: 842 KLFAEM-QKESRPDGITMACLLPACGSLAALEIGR-------GIHGCILRNGYSSELHVA 893
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
++D+ + G + A L+ M + W ++S C HG
Sbjct: 894 NALIDMYVKCGSLVHAR-LLFDMIPEKDLITWTVMISGCGMHG 935
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 162/376 (43%), Gaps = 46/376 (12%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D ++ +L+ C L+ G+ VH I +G G + +V +Y SCG + +G ++F
Sbjct: 450 DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIF 509
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D + + + V WNLM+S K G E++
Sbjct: 510 DHI------------------------------LSDNKVFLWNLMMSEYAKIGDYRESIY 539
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS--YAESSGLYRKVVSVGNALVD 276
LF +M+ + T +L A LG V + IH Y G Y VV N+L+
Sbjct: 540 LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVV---NSLIA 596
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y K G +D+A +F E+ ++VVSWN+MISG NG +E + QM+ V + AT
Sbjct: 597 TYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLAT 656
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY-GCMVDVLGRSGCVREAYDLIRS 395
V + CA+ G + R L G+ + + ++D+ + G + +A
Sbjct: 657 LVNSVAACANVGSLSLGRALHGQ--GVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEK 714
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW--NSGNYVLLSNIY--AEGGR 451
M + W SL+++ G L + A++ +E + Y + S ++ A G
Sbjct: 715 MG-QKTVVSWTSLIAAYVREG---LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNS 770
Query: 452 WDDAETLRMWMRENNV 467
D + ++R+NN+
Sbjct: 771 LDKGRDVHNYIRKNNM 786
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
Q ELD ++L +CA + G+ +HS S+G+ + V +G LV Y CG L
Sbjct: 445 QKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGV-LGAKLVFMYVSCGALR 503
Query: 286 TARNVFKEIPRKN-VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
R +F I N V WN M+S A G + L+++M G++ N TF +L C
Sbjct: 504 EGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCF 563
Query: 345 AHAGLVEKARELFASMT----GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
A G V + + + + G ++ V N ++ +SG V A+ L + R
Sbjct: 564 ATLGRVGECKRIHGCVYKLGFGSYNTVVN-----SLIATYFKSGEVDSAHKLFDELGDR- 617
Query: 401 NAAIWGSLLSSCRTHG 416
+ W S++S C +G
Sbjct: 618 DVVSWNSMISGCVMNG 633
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 237/434 (54%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A +F+++ V+ +N+MI Y G +E ++LF + + PDE T ++ A
Sbjct: 145 IESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISA 204
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
G + +G+ VH I GF I +++ Y+ CG+M+ +F +S+
Sbjct: 205 SARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY------ 258
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ V+SWN++I EAL LF EM
Sbjct: 259 -------------------------KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGES 293
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++L CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 294 PNDVTMLSILHACAHLGAIDIGRWIHVYID-----KRLKGVTNASSLRTSLIDMYSKCGD 348
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF + K++ +WNAMI G A +GR +++ +M + P+ TFVG+L+
Sbjct: 349 IEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSA 408
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+HAG+++ R +F SMT + I P LEHYGCM+D+LG SG +EA ++I +M++ P+
Sbjct: 409 CSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGV 468
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + L +EP N G+YVLLSNIYA GRW++ +R +
Sbjct: 469 IWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLN 528
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 529 DKGMKKVPGCSSIE 542
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 211/416 (50%), Gaps = 40/416 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ YA +F ++ P++L++N+M + ++L+ +KL+ + +LG+ P+ YTF LLK+
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + + G +HG +++ G+E + ++ +Y +++D KVFD SHRDV+
Sbjct: 73 CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
++ G+ +G ++ +F E+ + VVSWN MIS ++G EAL LF EM
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
DE+T+V V+ AR G++++G+ +HS+ G + + + NAL+DFY KCG ++TA
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHG-FGSNLKIVNALIDFYSKCGEMETACG 251
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F + K+V+SWN +I G + + L+++M+ G SPN T + +L CAH G
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 350 -------------------------------------VEKARELFASMTGLHSIVPNLEH 372
+E A ++F SM LH +P
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM--LHKSLPAWNA 369
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ GR+ + + +R I+P+ + LLS+C G ++L H + +
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM 425
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/296 (45%), Positives = 194/296 (65%), Gaps = 1/296 (0%)
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
D+ G L + + SW MI+ + G+ EA+ LF +M + + +E TVVAVL
Sbjct: 176 DLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLA 235
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+D+G IH Y+ G +++ V + N L+D Y KCG L+ A VF+E+ + VV
Sbjct: 236 ACADLGALDLGMRIHEYSNRHG-FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVV 294
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW+AMI GLA +GR E + L+ M G+ PN TF+G+L C+H GL+ + R FASM
Sbjct: 295 SWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASM 354
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
T + I+P +EHYGCMVD+L R+G + EA++ I +M ++PN +WG+LL +CR H +VE+
Sbjct: 355 TRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEM 414
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
AE A+K L+ L+P N G YV+LSNIYAE GRW+D +R +M++ VKK+PG S I
Sbjct: 415 AEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSI 470
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 163/360 (45%), Gaps = 40/360 (11%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN--QMRNP 63
+ LL N+ L Q+HA ++ S L L VC YA +IF + + P
Sbjct: 65 IDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKP 124
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++NS +KA + + + LF L+ + PD +T + +L+ACL + DL G+ +H
Sbjct: 125 ETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILH 184
Query: 124 GEIIRSGFERFGSI----------------------------RIGVVELYTSC---GQMD 152
G + + GF + S+ + VV + +C G +D
Sbjct: 185 GVVEKVGFRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALD 244
Query: 153 DGMKVFDEMSH----RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GM++ + + R+V + N +I + K G +++ +F EM ER+VVSW+ MI L
Sbjct: 245 LGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLA 304
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKV 267
GR EALRLF +M E + T + +L C+ +G + G ++ S G+ ++
Sbjct: 305 MHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQI 364
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
G +VD + G+L A +P K N V W A++ + E+ E + ++
Sbjct: 365 EHYG-CMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLL 423
>gi|115486527|ref|NP_001068407.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|108864631|gb|ABG22570.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645629|dbj|BAF28770.1| Os11g0661000 [Oryza sativa Japonica Group]
gi|215694601|dbj|BAG89792.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701272|dbj|BAG92696.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 610
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 250/459 (54%), Gaps = 3/459 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA L+ L A VS + A +F++ + +++S++ A S +
Sbjct: 25 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 84
Query: 81 SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + + +L + PD + + + + R+G+ +H + S + ++
Sbjct: 85 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 144
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V++Y CG DDG KVFD MS ++ +V ++ G+ G ++ L LFR M R++ +
Sbjct: 145 SLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFA 204
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGAVDIGQWIHSYA 258
W +IS L +G A+ LF EMR +D+A V++ V+ A L A +G+ +H
Sbjct: 205 WTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGST 264
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G ++ VGNAL+D Y KC + +AR VF+ I ++V+SW M+ G A +GR E
Sbjct: 265 MRLGFLSNMI-VGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEA 323
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ LY++M+ G PN+ TFVG++ C+HAGLV+K R+LF SM + I P L+HY C +D
Sbjct: 324 LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLD 383
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L RSG + EA +L+ +M P+ A WG+LLS+C + E+ +L+ L P +S
Sbjct: 384 LLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSST 443
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA G+WD +R M ++K PG S IE
Sbjct: 444 YILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIE 482
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 137/344 (39%), Gaps = 72/344 (20%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+HAHF+ + +++ + V + CG+ ++ K+F+ M + +++ +++ Y+
Sbjct: 126 QLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYA 182
Query: 77 LNGPSEEPVKLFALL--KNLGIWP------------------------------DEYTFA 104
NG SEE ++LF + +NL W D + +
Sbjct: 183 SNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLS 242
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
++ + +G+ +HG +R GF + ++++Y+ C + +VF+ ++ R
Sbjct: 243 IVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFR 302
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DVI SW M+ + GR EAL L+ M
Sbjct: 303 DVI-------------------------------SWTTMVVGEAQHGRAEEALALYDRMV 331
Query: 225 DQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ +E T V ++ C+ G V G Q S G+ ++ +D + G
Sbjct: 332 LAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY-TCYLDLLSRSGH 390
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
L A + +P + +W A++S E+ + + ++++
Sbjct: 391 LLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL 434
>gi|108864632|gb|ABG22571.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 250/459 (54%), Gaps = 3/459 (0%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA L+ L A VS + A +F++ + +++S++ A S +
Sbjct: 107 MHARILKEGLAHHPPNPAALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAVSHSAS 166
Query: 81 SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + + +L + PD + + + + R+G+ +H + S + ++
Sbjct: 167 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVVSPYNGDDVVKS 226
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V++Y CG DDG KVFD MS ++ +V ++ G+ G ++ L LFR M R++ +
Sbjct: 227 SLVDMYCKCGSPDDGRKVFDSMSAKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNLFA 286
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGAVDIGQWIHSYA 258
W +IS L +G A+ LF EMR +D+A V++ V+ A L A +G+ +H
Sbjct: 287 WTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLSIVIGGSADLAAFVLGRQLHGST 346
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G ++ VGNAL+D Y KC + +AR VF+ I ++V+SW M+ G A +GR E
Sbjct: 347 MRLGFLSNMI-VGNALIDMYSKCSDILSAREVFEGITFRDVISWTTMVVGEAQHGRAEEA 405
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ LY++M+ G PN+ TFVG++ C+HAGLV+K R+LF SM + I P L+HY C +D
Sbjct: 406 LALYDRMVLAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLD 465
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L RSG + EA +L+ +M P+ A WG+LLS+C + E+ +L+ L P +S
Sbjct: 466 LLSRSGHLLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSST 525
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA G+WD +R M ++K PG S IE
Sbjct: 526 YILLSNVYAVNGKWDSVAKVRKCMIGLEIRKEPGYSWIE 564
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 136/344 (39%), Gaps = 72/344 (20%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q+HAHF+ + +++ + V + CG+ ++ K+F+ M + +++ +++ Y+
Sbjct: 208 QLHAHFVVSPYNGDDVVKSSLVDMYCKCGSPDD---GRKVFDSMSAKNSVVWTALVSGYA 264
Query: 77 LNGPSEEPVKLFALL--KNLGIWP------------------------------DEYTFA 104
NG SEE ++LF + +NL W D + +
Sbjct: 265 SNGRSEEALQLFRSMPGRNLFAWTALISGLVNTGESVGAVELFVEMRRDGVRIDDAFVLS 324
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
++ + +G+ +HG +R GF + ++++Y+ C + +VF+ ++ R
Sbjct: 325 IVIGGSADLAAFVLGRQLHGSTMRLGFLSNMIVGNALIDMYSKCSDILSAREVFEGITFR 384
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
DVI M+ G + GR EAL L+ M
Sbjct: 385 DVISWTTMVVG-------------------------------EAQHGRAEEALALYDRMV 413
Query: 225 DQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ +E T V ++ C+ G V G Q S G+ ++ +D + G
Sbjct: 414 LAGAKPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHY-TCYLDLLSRSGH 472
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
L A + +P + +W A++S E+ + + ++++
Sbjct: 473 LLEAEELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLL 516
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/466 (33%), Positives = 267/466 (57%), Gaps = 7/466 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
L +HAH R +LH ++L + L +++YA ++F+QM +P+ +N++I+A+
Sbjct: 23 LKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFDQMPHPTTFFYNTLIRAH 82
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ + F L++ + PD+++F LLK+ L VHG +++ GF R
Sbjct: 83 AHSTTPSLSSLSFNLMRQNNVAPDQFSFNFLLKSRSRTTPLTHHNDVHGAVLKFGFCRHL 142
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR----DVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ G++ Y + G +VF+++ DV+ + ++ K G+++ +F E
Sbjct: 143 HVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDVVSWSGLLVAHVKAGELEVARRVFDE 202
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M +R VVSW M++ ++ R EAL LF EMR DE T+V+++ CA LG ++ G
Sbjct: 203 MPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSLVSACASLGDMETG 262
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+H + E +G + +V++ NAL+D Y KCG L+ A VF + RK++++WN M++ A
Sbjct: 263 MMVHRFVEENG-FGWMVALCNALIDMYGKCGCLEEAWRVFHGMTRKSLITWNTMVTVCAN 321
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G + L+E M+ GV P+ T + +L AH GLV++ LF SM + + P +E
Sbjct: 322 YGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEPRIE 381
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYG ++D+LGR+G ++EAYDL+ ++ I N A+WG+LL +CR HG VE+ E +K+L+ L
Sbjct: 382 HYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGALLGACRIHGDVEMGEKLIKKLLEL 441
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+P G Y+LL +IY G+ +A R M + +K+PG S +E
Sbjct: 442 KPDEGGYYILLRDIYVAAGQTVEANETRQAMLASRARKNPGCSWVE 487
>gi|224088613|ref|XP_002308496.1| predicted protein [Populus trichocarpa]
gi|222854472|gb|EEE92019.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/438 (34%), Positives = 245/438 (55%), Gaps = 2/438 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH LR L + + +S + +A K+F++MR V+ +NSMI Y+ G
Sbjct: 145 EIHCFVLRRGLVEDVFVENALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAG 204
Query: 80 PSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+E +L+ + L G P+ T +L+AC+ DL G VH I+ + E +
Sbjct: 205 FFKECKELYREMGALPGFKPNAVTVLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVC 264
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++ LY CG +D ++FDEMS +D + +I G+ G VDKG+ LFREM+ R +
Sbjct: 265 NALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGYMAHGVVDKGMELFREMKSRVLS 324
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN +IS L ++ R + L EM+ F + T+ +VLP + + G+ IH YA
Sbjct: 325 TWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLSSVLPTLSYFSNLKGGKEIHGYA 384
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+G Y + + V A++D Y K G L A+ VF + ++++ W A+IS A +G
Sbjct: 385 VKNG-YDRNIYVATAIIDTYAKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGDANSA 443
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ +++M++ G+ P+ TF VL CAH G+V+KA E+F SM+ + I P EHY CMV
Sbjct: 444 LTFFDEMLSNGIQPDHVTFTAVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVG 503
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
VLGR+G + +A + I +M I PNA +WG+LL VEL + A L +EP N+GN
Sbjct: 504 VLGRAGRLSQATEFISTMPIEPNAKVWGALLHGASLCVDVELGKFACDHLFEIEPENTGN 563
Query: 439 YVLLSNIYAEGGRWDDAE 456
Y +++N+Y++ G+W +A+
Sbjct: 564 YAIMANLYSQAGKWKEAD 581
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 173/366 (47%), Gaps = 44/366 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA L N + A +++ I +A +F+Q+ + + +N+++ AY++N
Sbjct: 38 QLHARLLLSSSTLDNYLGARLINLYSKTKHIHHARHVFDQIPHKNTFSYNALLIAYTMNN 97
Query: 80 PSEEPVKLFALLKNLGI---WPDEYTFAPLLKACLG---VGDLRVGQCVHGEIIRSGFER 133
+E + LF+ L P+ Y+ LLK+ V D+ +G+ +H ++R G
Sbjct: 98 HHKETINLFSSLLLSSSGDLQPNNYSITCLLKSLSSLLMVTDVCLGKEIHCFVLRRGLVE 157
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ ++ Y+ C + K+FD+M RDV+ N MI G+ + G F+E +
Sbjct: 158 DVFVENALISFYSKCLGVGFARKLFDKMRERDVVTWNSMIAGYAQAG-------FFKECK 210
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELDEATVVAVLPICARLGAVDIGQ 252
E L+ EM F+ + TV++VL C + + G
Sbjct: 211 E------------------------LYREMGALPGFKPNAVTVLSVLQACMQSQDLVFGM 246
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+H Y + + V+ V NAL+ Y KCG LD AR +F E+ K+ V++ A+ISG +
Sbjct: 247 EVHRYIVDNKVELDVL-VCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGYMAH 305
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA-----SMTGLHSIV 367
G + G+EL+ +M ++ +S A G++ H G+V+ RE+ + L S++
Sbjct: 306 GVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLSSVL 365
Query: 368 PNLEHY 373
P L ++
Sbjct: 366 PTLSYF 371
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 250/466 (53%), Gaps = 32/466 (6%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
R+ L ++H + RH L + L+ F++ + + ++F+ M +V +N++
Sbjct: 320 RSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNAL 379
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
+ Y+ N + + L+ + + G+ PD +T LL AC + L G+ +HG +R+G
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
I I ++ LY CG+ +FD M HR
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR--------------------------- 472
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
S+VSWN+MI+ ++G EA+ LF +M + E ++ V C++L A+ +G
Sbjct: 473 ----SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG 528
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +H +A + L + V ++++D Y K G + ++ +F + K+V SWN +I+G
Sbjct: 529 KELHCFALKAHLTEDIF-VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGI 587
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+GRG+ +EL+E+M+ G+ P+ TF G+L C+HAGLVE E F M LH+I P LE
Sbjct: 588 HGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLE 647
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HY C+VD+LGR+G + +A LI M P++ IW SLLSSCR HG++ L E +L+ L
Sbjct: 648 HYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLEL 707
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP NYVL+SN++A G+WDD +R M++ ++K G S IE
Sbjct: 708 EPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIE 753
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 159/318 (50%), Gaps = 36/318 (11%)
Query: 42 SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDE 100
S+CG+ ++ + +F+++R ++ +N+++ AY+ N E+ + +F+ L+ PD
Sbjct: 45 SMCGSPSDSRM---VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDN 101
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+T ++KAC G+ DL +GQ +HG + + ++ +Y CG +++ +KVF+
Sbjct: 102 FTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEH 161
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M R+++ N +I GF + G + + FREM
Sbjct: 162 MPERNLVSWNSIICGFSENGFLQESFNAFREML--------------------------- 194
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+ +++F D AT+V VLP+CA ++ G +H A GL +++ V N+L+D Y K
Sbjct: 195 --VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELM-VNNSLIDMYSK 251
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG--VSPNKATFV 338
C L A+ +F + +KN+VSWN+MI G A L ++M + + ++ T +
Sbjct: 252 CRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTIL 311
Query: 339 GVLTCCAHAGLVEKAREL 356
VL C ++ +EL
Sbjct: 312 NVLPVCLERSELQSLKEL 329
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 158/361 (43%), Gaps = 46/361 (12%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
+++HG T+ L + N ++A + CG + E A K+F M +++
Sbjct: 121 QIIHGMATKMDLVS--------DVFVGNALIAMY-GKCGLVEE---AVKVFEHMPERNLV 168
Query: 67 LFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+NS+I +S NG +E F L+ PD T +L C G D+ G VHG
Sbjct: 169 SWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG 228
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++ G + ++++Y+ C + + +FD+ ++++ N MI G+ ++ DV +
Sbjct: 229 LAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
YL ++M + D + DE T++ VLP+C
Sbjct: 289 TFYLLQKM-----------------------------QTEDAKMKADEFTILNVLPVCLE 319
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
+ + +H Y+ GL + V NA + Y +CG L ++ VF + K V SWNA
Sbjct: 320 RSELQSLKELHGYSWRHGLQSNEL-VANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNA 378
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTG 362
++ G A N ++LY QM G+ P+ T +L C+ + E+ FA G
Sbjct: 379 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 438
Query: 363 L 363
L
Sbjct: 439 L 439
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 49/322 (15%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
LL+AC D+ VG+ +H + S F + ++ +Y+ CG D VFD++
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL--- 60
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
R +++ WN ++S+ ++ +A+ +F E+
Sbjct: 61 ----------------------------RRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 225 D-QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ D T+ V+ CA L + +GQ IH A L V VGNAL+ Y KCG+
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVF-VGNALIAMYGKCGL 151
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA--KGVSPNKATFVGVL 341
++ A VF+ +P +N+VSWN++I G + NG + + +M+ + P+ AT V VL
Sbjct: 152 VEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 342 TCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
CA +EK + A GL+ L ++D+ + + EA L+ + +
Sbjct: 212 PVCAGEEDIEKGMAVHGLAVKLGLNE---ELMVNNSLIDMYSKCRFLSEA-QLLFDKNDK 267
Query: 400 PNAAIWGSLLSS-------CRT 414
N W S++ CRT
Sbjct: 268 KNIVSWNSMIGGYAREEDVCRT 289
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+L C + +++G+ +H +S + + ++ Y CG +R VF ++ RK
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKAR-E 355
N+ WNA++S N E + ++ ++I+ P+ T V+ C AGL++ +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQ 121
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ M +V ++ ++ + G+ G V EA + M R N W S++ +
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER-NLVSWNSIICGFSEN 180
Query: 416 GHVELAEHAVKELI 429
G ++ + +A +E++
Sbjct: 181 GFLQESFNAFREML 194
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 258/477 (54%), Gaps = 10/477 (2%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LL G + +++HA +R + Q + + A + + +P+ +
Sbjct: 36 LLAGCASARRASELHAAAVRAGVDQDKAVDFRLQRAYAASGRLDLAVALLRRTPDPTAVF 95
Query: 68 FNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ S I A+S G + L + +L + G+ P +T + L AC G L VG+ +HG
Sbjct: 96 YTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPAC---GGLAVGRALHGYA 152
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR-NLMIHGFCKKGDVDKG 185
++ + ++ +Y G +FD M +V M+ + K G +D
Sbjct: 153 VKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDA 212
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF + + ++ WN M+ + GR SEALRLF M E DE +VV L A+L
Sbjct: 213 RSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQL 272
Query: 246 GAVDIGQWIHSYAESSGLYRKVVS--VGNALVDFYCKCGILDTARNVFKEIPR--KNVVS 301
G + G+W+HS+ +S R ++ VG AL+D Y KCG L+ A VF ++ +++V+
Sbjct: 273 GTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVA 332
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WNAM++G A +G + + Q+ A+G+ P TF+GVL C+H+GLV++ RELF SM
Sbjct: 333 WNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMA 392
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS-IRPNAAIWGSLLSSCRTHGHVEL 420
+ I P +EHYGCMVD+LGR+G V EA++L++SM+ +P+A +W SLL++CR H ++EL
Sbjct: 393 EEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMEL 452
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L+ NSG YVLLSN+YA G W + +R MR + ++K PG S +E
Sbjct: 453 GQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVE 509
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 232/387 (59%), Gaps = 4/387 (1%)
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+GI+PD T+ L KA + +G +HG +I+SGFE + ++ +Y SCG +
Sbjct: 3 QVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIV 62
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
KVFD ++++ N M+ G+ K G +D LF M ER V SW+ +I KSG
Sbjct: 63 YARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGN 122
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
+A+ +F +MR + +E T+V+VL CA LGA+D G+ +H Y +G +V +
Sbjct: 123 YGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLV-LRT 181
Query: 273 ALVDFYCKCGILDTARNVFKEIP--RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+L+D Y KCG ++ A VF+ + + +V+ WNAMI GLA +G + ++LY +M G+
Sbjct: 182 SLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGI 241
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
P++ TF+ +L+ CAH GLV++A +F + G + + P EHY CMVDV+ R+G V EAY
Sbjct: 242 KPDEITFLCLLSACAHGGLVKQASYVFEGL-GKNGMTPKTEHYACMVDVMARAGQVAEAY 300
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+ M + P A++ G+LLS C HG ++LAE K+LI L+P + G YV LSN+YA G
Sbjct: 301 QFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGR 360
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
RWD+A +R M VKK+PG S +E
Sbjct: 361 RWDEARIMREAMERRGVKKTPGYSFLE 387
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 136/342 (39%), Gaps = 66/342 (19%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM------- 71
IH H ++ + + + G+ +I YA K+F+ +++ +NSM
Sbjct: 30 VSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYARKVFDGTPVKNLVSWNSMVDGYAKC 89
Query: 72 ------------------------IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
I Y+ +G + + +F ++ G +E T +L
Sbjct: 90 GYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVL 149
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR--D 165
AC +G L G+ +H ++ +GFE +R ++++Y CG +++ VF +S R D
Sbjct: 150 CACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSD 209
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V++ N MI G G V E+L L+ EM+
Sbjct: 210 VLIWNAMIGGLATHGLV-------------------------------KESLDLYTEMQI 238
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ DE T + +L CA G V ++ +G+ K +VD + G +
Sbjct: 239 AGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYA-CMVDVMARAGQVA 297
Query: 286 TARNVFKEIPRKNVVSW-NAMISGLAFNGRGELGVELYEQMI 326
A ++P + S A++SG +G+ +L + +++I
Sbjct: 298 EAYQFLCQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLI 339
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 244/439 (55%), Gaps = 21/439 (4%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYT 102
G + A K+F++M +V+ + SMI+ Y G E LF + K+L W
Sbjct: 179 GNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWK---- 234
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS----CGQMDDGMKVF 158
++ A + VG+L R+ FE +G L S G+MD + F
Sbjct: 235 --VMVSAYMSVGNLVAA--------RNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFF 284
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D M R+V ++I G+ K GDVD +F +M E+++V+W+ MI K+G +L+
Sbjct: 285 DRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLK 344
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
L+ ++Q + DE + ++ C++LG D + + L+ + V +L+D Y
Sbjct: 345 LYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNL-QVVTSLIDMY 403
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG ++ A VF+ + +K++ ++ +I+ A +G E + L+ +M + P+ F+
Sbjct: 404 AKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFL 463
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
GVLT C H GLV + R LF M + I P+ +HY CMVD+LGR+GC+ EA+ LI SM +
Sbjct: 464 GVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPV 523
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
PNA +WG+LLS+CR H +V+LAE A EL +EP NSGNYVLL NIYA+ G+WDD +
Sbjct: 524 APNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKV 583
Query: 459 RMWMRENNVKKSPGQSLIE 477
R +REN V+K+ G S IE
Sbjct: 584 RAMIRENRVRKNRGSSWIE 602
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 27/454 (5%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFL-RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
I +LL + LT IHAH L + S+L L + + + YA K+F++ P
Sbjct: 6 ISKLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEP 65
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ L+ ++I ++ N E F + I P +T A +LKA +G ++ G V+
Sbjct: 66 NSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVY 125
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G +R G+E ++ ++EL+ CG+M ++FDEM RD + N MI G+ G VD
Sbjct: 126 GLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVD 185
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
LF M ER+V+SW MI K+G EA LF M ++ + V A + +
Sbjct: 186 IARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVGN 245
Query: 244 RLGAV---------DIGQW--IHSYAESSG-----------LYRKVVSVGNALVDFYCKC 281
+ A D+G W + S +G + + V+ ++D Y K
Sbjct: 246 LVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKV 305
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G +D AR+VF ++P KN+V+W+ MI G A G ++LY+ +G+ P++ +G++
Sbjct: 306 GDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGII 365
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C+ G+ + A + G S+ PNL+ ++D+ + G + A + M + +
Sbjct: 366 SACSQLGVPDTAESVICDFVG-PSLFPNLQVVTSLIDMYAKCGNIERAVQVFE-MVDQKD 423
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKEL--INLEP 433
+ +++++ HG E A E+ N++P
Sbjct: 424 LHCYSTVITAFANHGLSEDAISLFSEMQKANIKP 457
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 43/86 (50%)
Query: 25 FLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEP 84
F+ L + ++ + + I+ A ++F + + ++++I A++ +G SE+
Sbjct: 384 FVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDA 443
Query: 85 VKLFALLKNLGIWPDEYTFAPLLKAC 110
+ LF+ ++ I PD F +L AC
Sbjct: 444 ISLFSEMQKANIKPDGVAFLGVLTAC 469
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 250/441 (56%), Gaps = 36/441 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L +F SVC N ++ A +F+++ ++ L+N +I+AY+ NGP E + L+ + G+
Sbjct: 99 LVNFYSVC---NSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGL 155
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
PD +T +LKAC + + G+ +H +IRSG+ER + +V++Y CG + D
Sbjct: 156 KPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDAR- 214
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
++F ++ +R V WN M+++ ++G E+
Sbjct: 215 ------------------------------HVFDKIVDRDAVLWNSMLAAYAQNGHPDES 244
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L L EM + EAT+V V+ A + + G+ IH + G ++ V AL+D
Sbjct: 245 LSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG-FQYNDKVKTALID 303
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + A +F+ + K VVSWNA+I+G A +G ++L+E+M+ K P+ T
Sbjct: 304 MYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM-KEAQPDHIT 362
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
FVG L C+ L+++ R L+ M I P +EHY CMVD+LG G + EAYDLIR M
Sbjct: 363 FVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM 422
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ P++ +WG+LL+SC+THG+VELAE A+++LI LEP +SGNYV+L+N+YA+ G+W+
Sbjct: 423 DVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKWEGVA 482
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
LR M + +KK+ S IE
Sbjct: 483 RLRQLMIDKGIKKNIACSWIE 503
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 128/309 (41%), Gaps = 37/309 (11%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH +R + + A V + + A +F+++ + +L+NSM+ AY+ NG
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+E + L + G+ P E T ++ + + L G+ +HG R GF+ ++
Sbjct: 241 PDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTA 300
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y CG + +F+ + + V+ N +I G+
Sbjct: 301 LIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGY------------------------ 336
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
G EAL LF M +A + D T V L C+R +D G+ +++
Sbjct: 337 -------AMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVR 388
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKE---IPRKNVVSWNAMISGLAFNGRGEL 317
V +VD CG LD A ++ ++ +P V W A+++ +G EL
Sbjct: 389 DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVEL 446
Query: 318 GVELYEQMI 326
E++I
Sbjct: 447 AEVALEKLI 455
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 7/185 (3%)
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
++L C A++ G+ +H+ G+ + + LV+FY C L A ++F +IP+
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNL-DLATKLVNFYSVCNSLRNAHHLFDKIPK 121
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
N+ WN +I A+NG E + LY QM+ G+ P+ T VL C+ + + R +
Sbjct: 122 GNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVI 181
Query: 357 FASM--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+ +G ++ +VD+ + GCV +A + + R +A +W S+L++
Sbjct: 182 HERVIRSGWER---DVFVGAALVDMYAKCGCVVDARHVFDKIVDR-DAVLWNSMLAAYAQ 237
Query: 415 HGHVE 419
+GH +
Sbjct: 238 NGHPD 242
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L HGR +IH RH ++ + + + +K A +F ++R V+
Sbjct: 276 LPHGR-------EIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVS 328
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I Y+++G + E + LF + PD TF L AC L G+ ++ ++
Sbjct: 329 WNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMV 387
Query: 128 RS-----GFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
R E + + V+L CGQ+D+ + +M
Sbjct: 388 RDCRINPTVEHYTCM----VDLLGHCGQLDEAYDLIRQM 422
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 249/463 (53%), Gaps = 52/463 (11%)
Query: 30 LHQSNLILAHF---------------VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+H+ NLI H +++ N + A ++F+QM +V+ + +MI A
Sbjct: 77 VHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISA 136
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS ++ ++L L+ + P+ YT++ +L++C G+ D+R+ +H II+ G E
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES- 192
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
DV VR+ +I F K G+ + L +F EM
Sbjct: 193 ------------------------------DVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ WN +I ++ R AL LF M+ F ++AT+ +VL C L +++G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H + Y + + + NALVD YCKCG L+ A VF ++ ++V++W+ MISGLA NG
Sbjct: 283 HVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ ++L+E+M + G PN T VGVL C+HAGL+E F SM L+ I P EHYG
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CM+D+LG++G + +A L+ M P+A W +LL +CR ++ LAE+A K++I L+P
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE 459
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++G Y LLSNIYA +WD E +R MR+ +KK PG S IE
Sbjct: 460 DAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 38/304 (12%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+L N + + +H ++ L + + + V L E + A +F++M ++
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I ++ N S+ ++LF +K G ++ T +L+AC G+ L +G H I+
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ +++ + +V++Y CG ++D ++VF++M RDVI + MI G
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL----------- 334
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
++G EAL+LF M+ + + T+V VL C+ G
Sbjct: 335 --------------------AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 248 VDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNA 304
++ G W + + LY V ++D K G LD A + E+ + V+W
Sbjct: 375 LEDG-WYY-FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 305 MISG 308
++
Sbjct: 433 LLGA 436
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A++ ++ D AT ++ C AV G I + +G +R ++ + N L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNG-HRPMMFLVNVLI 103
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ Y K +L+ A +F ++P++NV+SW MIS + + +EL M+ V PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 336 TFVGVLTCC--------AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
T+ VL C H G++++ GL S ++ ++DV + G
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKE---------GLES---DVFVRSALIDVFAKLGEPE 211
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+A + M + +A +W S++ + ++A K +
Sbjct: 212 DALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 256/461 (55%), Gaps = 4/461 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIHA F+ L + ++++I YA +FN++ +P V +N+MI+ +L
Sbjct: 43 QIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLGN 102
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ + L+ L G+ PD YT+ +LK C + + G+ VH ++I++G I
Sbjct: 103 CPYDSLLLYNKLLLGGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHT 162
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y + V E S +V+ N MI G+ +G V+K +F +M + +
Sbjct: 163 SLIHMYAKSDCLACAEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAAT 222
Query: 200 WNLMISSLGKSGRDSEALRLFHEM---RDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
W+ MI+ K+G EAL +F EM + + +E+ +V+ L A LGA+D G+WIH+
Sbjct: 223 WSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHA 282
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y G + +++G LVD Y KCG + + +F+E+ +++VV+W M+SG A +G+
Sbjct: 283 YIRRIGA-KISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMHGQAR 341
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+L+++M+A G PN+ FV +L+ C+HAG +E F M I P++EHYGCM
Sbjct: 342 KCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCM 401
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EA +LI SM P A IWG+LLS+CR H + A ++L+ LEP
Sbjct: 402 VDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRG 461
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y L +++ G ++A+ + +++EN ++ + G S IE
Sbjct: 462 DRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIE 502
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 253/458 (55%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + L+ V++ N + A +F+++ ++ L+N MI+ Y+ NG
Sbjct: 22 QLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNG 81
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
P E + L+ +++ G+ PD++TF +LKAC + + G+ +H ++IRSG E +
Sbjct: 82 PYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGA 141
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y CG ++ +V F ++ ER VV
Sbjct: 142 ALIDMYAKCGCVESARQV-------------------------------FDKIDERDVVC 170
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN M+++ ++G+ E+L L M + E T V + A G + G+ +H Y+
Sbjct: 171 WNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSW 230
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + V AL+D Y K G ++ AR++F+ + K VVSWNAMI+G A +G +
Sbjct: 231 RHG-FESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEAL 289
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+++M K V P+ TFVGVL C+H GL+ + + F SM +I P ++HY CM+D+
Sbjct: 290 DLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDL 348
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LG G + EAY LI M + P+A +WG+LL SC+ HG+VE+ E A+++L+ LEP + GNY
Sbjct: 349 LGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNY 408
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSN+YA+ G+WD LR M +KKS S IE
Sbjct: 409 VILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIE 446
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 151/326 (46%), Gaps = 34/326 (10%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
+A LL++C+ + G+ +H I + G + +V LY C + + +FD +S
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
R++ + N+MI G+ +WN G A+ L+++
Sbjct: 64 KRNLFLWNVMIRGY----------------------AWN---------GPYELAISLYYQ 92
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
MRD D+ T VL C+ L A++ G+ IH SGL V VG AL+D Y KCG
Sbjct: 93 MRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVF-VGAALIDMYAKCG 151
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+++AR VF +I ++VV WN+M++ + NG+ + + L M G+ P + TFV +
Sbjct: 152 CVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIA 211
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
A GL+ + +EL + H N + ++D+ +SG V A L +
Sbjct: 212 ASADNGLLPQGKELHG-YSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLE-EKRV 269
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKEL 428
W ++++ HGH A KE+
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEM 295
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 262/461 (56%), Gaps = 35/461 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP-SVLLFNSMIKAYSLN 78
Q+HA L ++ V + + + A ++F++M N +V L+N +I+AY+ +
Sbjct: 89 QLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQGNVFLWNVLIRAYARD 148
Query: 79 GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
GP E ++L+ A+L + PD +T+ P+LKAC + DL G+ VH ++R+ + +
Sbjct: 149 GPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFV 208
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G++++Y CG MD+ VF++ + RD V
Sbjct: 209 CTGLIDMYAKCGCMDEAWAVFNDTTIRDAAV----------------------------- 239
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
WN MI++ G++GR +EAL L M + AT+V+ + A A+ G+ +H Y
Sbjct: 240 --WNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGY 297
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
G + + +L+D Y K G + A +F+++ + ++SWNAMI G +G +
Sbjct: 298 GWRRG-FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADH 356
Query: 318 GVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
EL+ +M ++ V P+ TFVGVL+ C H G+V++A+E+F M ++SI P ++HY C+
Sbjct: 357 AFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCL 416
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VDVLG SG +EA D+I+ M ++P++ IWG+LL+ C+ H +VELAE A+++LI LEP ++
Sbjct: 417 VDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDA 476
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYVLLSNIYAE G+W++A +R M +KK S IE
Sbjct: 477 GNYVLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIE 517
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 56/341 (16%)
Query: 98 PDEYT---FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
P Y +A +L++C+ +R G+ +H ++ SG + +V+LY SCG +
Sbjct: 63 PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122
Query: 155 MKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+VFDEM ++ +V + N++I + + G + + L+R
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYR----------------------- 159
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
A+ + M+ F T VL CA L + G+ +H + + V V
Sbjct: 160 --AMLAYGSMKPDNF-----TYPPVLKACAALLDLSAGREVHDRVMRTN-WATDVFVCTG 211
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG +D A VF + ++ WN+MI+ NGR + L M A+G++P
Sbjct: 212 LIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPT 271
Query: 334 KATFVGVLTCCAHAGLVEKAREL--------FASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
AT V ++ A A + + REL F S L + ++D+ +SG
Sbjct: 272 IATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKT---------SLLDMYAKSGW 322
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
V A+ L + R + W +++ HGH A+HA +
Sbjct: 323 VMVAHVLFEQLLHRELIS-WNAMICGFGMHGH---ADHAFE 359
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 235/426 (55%), Gaps = 7/426 (1%)
Query: 57 FNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVG 114
NQ + + + + S I + NG E K F+ ++ G+ P+ TF +L C G
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSG 87
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+G +HG + G +R + +G ++ +Y+ G++ VFD M ++ + N M
Sbjct: 88 SEALGDLLHGYACKLGLDR-NHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTM 146
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ + G VD +F +M ER ++SW MI+ G EAL F EM+ + D
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDY 206
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
++A L C LGA+ G W+H Y S ++ V V N+L+D YC+CG ++ AR VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVMSQD-FKNNVRVSNSLIDLYCRCGCVEFARQVFD 265
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
++ ++ VVSWN++I G A NG + + +M + P+ TF G LT C+H GLVE+
Sbjct: 266 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEE 325
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
F M + I P +EHYGC+VD+ R+G + +A L++SM ++PN + GSLL++C
Sbjct: 326 GLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 413 RTHG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
R HG + LAE +K L +L + NYV+LSN+YA G+W+ A +R M+ +KK P
Sbjct: 386 RNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 472 GQSLIE 477
G S IE
Sbjct: 446 GFSSIE 451
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 129/316 (40%), Gaps = 32/316 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALN 214
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F+ + +++LY CG ++ +VFD+M R V+
Sbjct: 215 ACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVS 274
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E + F
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQE-------------------------------ERF 303
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D T L C+ +G V+ G S + LVD Y + G L+ A
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+ + +P K N V ++++ +G + E + + + + +V + A
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAAD 423
Query: 348 GLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 424 GKWEGASKMRRKMKGL 439
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 249/463 (53%), Gaps = 52/463 (11%)
Query: 30 LHQSNLILAHF---------------VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+H+ NLI H +++ N + A ++F+QM +V+ + +MI A
Sbjct: 77 VHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISA 136
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS ++ ++L L+ + P+ YT++ +L++C G+ D+R+ +H II+ G E
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES- 192
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
DV VR+ +I F K G+ + L +F EM
Sbjct: 193 ------------------------------DVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ WN +I ++ R AL LF M+ F ++AT+ +VL C L +++G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H + Y + + + NALVD YCKCG L+ A VF ++ ++V++W+ MISGLA NG
Sbjct: 283 HVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ ++L+E+M + G PN T VGVL C+HAGL+E F SM L+ I P EHYG
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CM+D+LG++G + +A L+ M P+A W +LL +CR ++ LAE+A K++I L+P
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE 459
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++G Y LLSNIYA +WD E +R MR+ +KK PG S IE
Sbjct: 460 DAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 135/302 (44%), Gaps = 38/302 (12%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+L N + + +H ++ L + + + V L E + A +F++M ++
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I ++ N S+ ++LF +K G ++ T +L+AC G+ L +G H I+
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ +++ + +V++Y CG ++D ++VF++M RDVI + MI G
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL----------- 334
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
++G EAL+LF M+ + + T+V VL C+ G
Sbjct: 335 --------------------AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 248 VDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNA 304
++ G W + + LY V ++D K G LD A + E+ + V+W
Sbjct: 375 LEDG-WYY-FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 305 MI 306
++
Sbjct: 433 LL 434
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A++ ++ D AT ++ C AV G I + +G +R ++ + N L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNG-HRPMMFLVNVLI 103
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ Y K +L+ A +F ++P++NV+SW MIS + + +EL M+ V PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 336 TFVGVLTCC--------AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
T+ VL C H G++++ GL S ++ ++DV + G
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKE---------GLES---DVFVRSALIDVFAKLGEPE 211
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+A + M + +A +W S++ + ++A K +
Sbjct: 212 DALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 239/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+MI Y+ G +E ++LF + + PDE T ++ A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG------------- 322
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
LF + + V+SWN +I EAL LF EM
Sbjct: 323 ------------------LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYID-----KRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF I K++ SWNAMI G A +GR + +L+ +M G+ P+ TFVG+L+
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F +MT + + P LEHYGCM+D+LG SG +EA ++I M + P+
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP N G+YVLLSNIYA GRW++ R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 600 DKGMKKVPGCSSIE 613
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 236/461 (51%), Gaps = 39/461 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + C + YA +F ++
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ +KL+ + +LG+ P+ YTF +LK+C + GQ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G + + ++ +Y G+++D KVFD+ HRDV+ +I G+ +G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ LF E+ + VVSWN MIS ++G EAL LF +M DE+T+V V+ C
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ G++++G+ +H + + G + + + NAL+D Y KCG L+TA +F+ +P K+V+SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR-------- 354
N +I G + + L+++M+ G +PN T + +L CAH G ++ R
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 355 ----------------ELFA---SMTGLHSIVPNLEH-----YGCMVDVLGRSGCVREAY 390
+++A + H + ++ H + M+ G ++
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 391 DL---IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
DL +R + I+P+ + LLS+C G ++L H + +
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 253/460 (55%), Gaps = 40/460 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+I A K+F++M +V+ +N+MI AY + +E VKLF + D ++ ++
Sbjct: 250 KIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETP----YKDCVSWTTMIN 305
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+ VG L + V+ ++ ++ G+++ G++D+ +VF +++ RD I
Sbjct: 306 GYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQ----NGRIDEASQVFSQLNKRDAIC 361
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---- 224
N MI G+C+ G + + L LFR+M ++ VSWN MIS ++G A +F M
Sbjct: 362 WNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNV 421
Query: 225 ---------------------------DQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+ + D++T L CA L A+ +G+ +H
Sbjct: 422 ISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHEL 481
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
SG Y + V NAL+ Y KCG + +A VFK+I +++SWN++ISG A NG
Sbjct: 482 ILKSG-YINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANE 540
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+EQM ++G P++ TF+G+L+ C+HAGL + +LF M +I P EHY C+V
Sbjct: 541 AFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLV 600
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR G + EA++++R M ++ NA +WGSLL++CR H ++EL + A L+ LEP N+
Sbjct: 601 DLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNAS 660
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NY+ LSN++AE GRW+D E LR+ MRE K PG S IE
Sbjct: 661 NYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIE 700
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 210/451 (46%), Gaps = 43/451 (9%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
+H+++ V+V + A ++F++M +++ +N+MI Y N EE KLF
Sbjct: 44 IHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFD 103
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
L+ D +++A ++ G L + + E++ + + ++ Y G
Sbjct: 104 LMAE----RDNFSWALMITCYTRKGMLEKARELF-ELVPDKLDT--ACWNAMIAGYAKKG 156
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+ DD KVF++M +D++ N M+ G+ + G + + F M ER+VVSWNLM++
Sbjct: 157 RFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVN 216
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-- 267
+ A LF ++ D + + V +L AR G + E+ L+ ++
Sbjct: 217 NCDLGSAWELFEKIPDP----NAVSWVTMLCGFARHGKI---------VEARKLFDRMPC 263
Query: 268 --VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
V NA++ Y + +D A +FKE P K+ VSW MI+G G+ + E+Y QM
Sbjct: 264 KNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM 323
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
K V+ A G++ G +++A ++F+ + +I N M+ +SG
Sbjct: 324 PYKDVAAKTALMSGLI----QNGRIDEASQVFSQLNKRDAICWN-----SMIAGYCQSGR 374
Query: 386 VREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSGNYVLLS 443
+ EA +L R M ++ NA W +++S G ++ A + + N+ WNS L++
Sbjct: 375 MSEALNLFRQMPVK-NAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNS----LIT 429
Query: 444 NIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
G D ++L + +E K P QS
Sbjct: 430 GFLQNGLYLDALKSLVLMGQEG---KKPDQS 457
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 23/308 (7%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G++D+ +VF + H++ N M+ F K G V LF +M +R++VSWN MI+
Sbjct: 31 GKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL 90
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ EA +LF D E D + ++ R G ++ + + +
Sbjct: 91 HNNMVEEAHKLF----DLMAERDNFSWALMITCYTRKGMLEKARELFELVPD----KLDT 142
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+ NA++ Y K G D A VF+++P K++VS+N+M++G NG+ L ++ +E+M +
Sbjct: 143 ACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAER 202
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
V G + C + A ELF + PN + M+ R G + E
Sbjct: 203 NVVSWNLMVAGFVNNCD----LGSAWELFEKIPD-----PNAVSWVTMLCGFARHGKIVE 253
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW-NSGNYVLLSNIYA 447
A L M + N W +++++ ++ A KE P+ + ++ + N Y
Sbjct: 254 ARKLFDRMPCK-NVVSWNAMIAAYVQDLQIDEAVKLFKE----TPYKDCVSWTTMINGYV 308
Query: 448 EGGRWDDA 455
G+ D+A
Sbjct: 309 RVGKLDEA 316
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 57/248 (22%)
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
+ ++V + N I LGK G+ EA R+F
Sbjct: 13 QSKNVFNQNKKIIYLGKQGKIDEAKRVF-------------------------------- 40
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
S + K + N++V + K G + AR +F ++ ++N+VSWN MI+G N
Sbjct: 41 --------SNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHN 92
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
E +L++ M + + ++ ++TC G++EKARELF +VP+
Sbjct: 93 NMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKARELF-------ELVPDKLD 141
Query: 373 YGC---MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
C M+ + G +A + M ++ + + S+L+ +G + LA + +
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPVK-DLVSYNSMLAGYTQNGKMGLAMKFFERMA 200
Query: 430 --NLEPWN 435
N+ WN
Sbjct: 201 ERNVVSWN 208
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N + + K G +D A+ VF + KN ++N+M++ A NGR +L+++M + +
Sbjct: 21 NKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLV 80
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
G L H +VE+A +LF M + + M+ R G + +A +
Sbjct: 81 SWNTMIAGYL----HNNMVEEAHKLFDLMAERDNF-----SWALMITCYTRKGMLEKARE 131
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA-----VKELINLEPWNSGNYVLLSNIY 446
L + + + A W ++++ G + AE VK+L++ +G Y
Sbjct: 132 LFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAG--------Y 183
Query: 447 AEGGRWDDAETLRMWMRENNV 467
+ G+ A M E NV
Sbjct: 184 TQNGKMGLAMKFFERMAERNV 204
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 20 QIHAHFLR----HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+H L+ + L SN ++A + G ++ A K+F + ++ +NS+I Y
Sbjct: 477 QLHELILKSGYINDLFVSNALIAMYAKCGG----VQSAEKVFKDIEGVDLISWNSLISGY 532
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
+LNG + E F + + G PDE TF +L AC G
Sbjct: 533 ALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAG 571
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/478 (35%), Positives = 254/478 (53%), Gaps = 38/478 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNP 63
L LL ++ HL QIH+ L ++ + S ++ YA I + +P
Sbjct: 668 LSLLKLCSSIKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHP 727
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
L +N +I+ Y+ + ++ + ++ ++N GI P+ TF LLKAC + G+ VH
Sbjct: 728 VPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATKEGKQVH 787
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
E+I+ G + + +V Y SC ++ D KVFD
Sbjct: 788 VEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFD------------------------ 823
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
EM ER+VVSWN +I+S +S + EA+R F +MRD FE D T+V +L ICA
Sbjct: 824 -------EMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICA 876
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
+G + +G+WIHS GL +G ALVD Y K G + A+ VF + KNV +W+
Sbjct: 877 EMGNLGLGRWIHSQVIERGLVLNY-QLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWS 935
Query: 304 AMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
AMI GLA +G + G+EL+ M+ + PN TF+GVL C+HAGLV F M
Sbjct: 936 AMILGLAQHGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGH 995
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH---GHVE 419
+ I P + HYG MVD+LGR+G ++EAY+ I M +P+ +W +LLS+C H
Sbjct: 996 TYGIKPMMVHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTG 1055
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A K L+ LEP SGN+V+++N+YA+ G W+ A +R MR+ +KK G+S +E
Sbjct: 1056 VAYKVRKRLLELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKAGESCVE 1113
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 243/453 (53%), Gaps = 47/453 (10%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA--LLKNL 94
L S CG LN+ A K+F+++ +V+ + SMI Y N + E V LF LL +
Sbjct: 127 LIDMYSKCGYLND---ARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDE 183
Query: 95 GIWP---------DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELY 145
+ D ++ AC V V +CVHG ++ GFE ++ +++ Y
Sbjct: 184 TDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAY 243
Query: 146 TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMIS 205
CG++ KVFD M E V SWN +I+
Sbjct: 244 AKCGEISVSRKVFDG-------------------------------MEETDVCSWNSLIA 272
Query: 206 SLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
++G EA LF +M + + T+ AVL CA GA+ IG+ IH L
Sbjct: 273 VYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE 332
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+V VG ++VD YCKCG ++ AR F + RKNV SW M++G +G G+ ++++ +
Sbjct: 333 DNLV-VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYE 391
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
MI G+ PN TFV VL C+HAGL+++ F M + P +EHY CMVD+LGR+G
Sbjct: 392 MIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAG 451
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
++EAY LI+ M ++P+ +WGSLL +CR H +VEL E + ++L L+P N G YVLLSN
Sbjct: 452 YLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSN 511
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA+ GRWDD E +R+ M+ + + K+PG S++E
Sbjct: 512 IYADAGRWDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 185/390 (47%), Gaps = 36/390 (9%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
SV +NS+I ++ +G S + + F+ ++ L + P+ TF +K+C + DL G+ +H
Sbjct: 50 SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+ G+ + ++++Y+ CG ++D K+FDE+ R+V+ MI G+ +
Sbjct: 110 QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAR 169
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ ++LF+E L++ + E+ +D + V+ CA
Sbjct: 170 EAVFLFKEF---------LLVDETD-----------YDEIVGVGVGVDSVLLGCVISACA 209
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
R+ + + +H A G + ++VGN L+D Y KCG + +R VF + +V SWN
Sbjct: 210 RVCVKSVTECVHGLAVKKG-FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268
Query: 304 AMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
++I+ A NG L+ M+ +G V N T VL CAH+G ++ + + +
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328
Query: 363 LHSIVPNLEHYGCMVDVL---GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + NL +VD+ GR R+A+D ++ R N W +++ HGH +
Sbjct: 329 ME-LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK----RKNVKSWTVMVAGYGMHGHGK 383
Query: 420 LAEHAVKELI--NLEPWNSGNYVLLSNIYA 447
A E+I ++P NY+ ++ A
Sbjct: 384 EAMKVFYEMIRCGIKP----NYITFVSVLA 409
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ +L + ++ V + ++ A K F++++ +V + M+ Y ++G
Sbjct: 322 IHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGH 381
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+E +K+F + GI P+ TF +L AC G L+ G
Sbjct: 382 GKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 259/495 (52%), Gaps = 47/495 (9%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H I HF L +NL+ H V +L + K ++FN+M + + +N M+K Y
Sbjct: 216 HALVIKLHFFGLVLISTNLL--HMYCVFSSLKDTK---RLFNEMPVRNTVSWNVMLKGYV 270
Query: 77 LNGPSEEPVKLF-------------------------------ALLKNLGIWPDEYTFAP 105
+G ++ +LF + ++ + P+E
Sbjct: 271 KSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVD 330
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL AC + G+ H I+++GF F I+ ++ Y +C ++D +
Sbjct: 331 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSH 390
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+ N+MI GF K G +D+ +F M E+ V SW+ MIS ++ AL LFH M D
Sbjct: 391 LTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 450
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN----ALVDFYCKC 281
E +E T+V+V A LG + G+W H Y + KV+ + + A++D Y KC
Sbjct: 451 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEY-----VCNKVIPLNDNLSAAIIDMYAKC 505
Query: 282 GILDTARNVFKEIPRKN--VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G +DTA +VF++I K V WNA+I GLA +G L +E++ + + + N TF+G
Sbjct: 506 GSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLG 565
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ C HAGLVE F SM H + PN++HYGC+VD+LGR G +REA +++R+M ++
Sbjct: 566 VLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMK 625
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
+ IWG+LL+S RTHG VE+ E A + L L+P + VLLSN+YA+ G W+DA +R
Sbjct: 626 ADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVR 685
Query: 460 MWMRENNVKKSPGQS 474
++ + +SPG S
Sbjct: 686 RAIQSQRMIRSPGYS 700
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 201/420 (47%), Gaps = 38/420 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N++++ +V L +++ A ++F +M + + +MI + N E +++F +++
Sbjct: 131 NIMMSGYVK----LRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRS 186
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
G+ P+E T A ++ AC +G + + +H +I+ F I ++ +Y + D
Sbjct: 187 AGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKD 246
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++F+EM R+ + N+M+ G+ K G VD+ LF + ER V SW +MI + R
Sbjct: 247 TKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRL 306
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY--------- 264
+AL L+ MR +E +V +L C + +++ G+ HS +G
Sbjct: 307 RKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATI 366
Query: 265 -------RKV--------------VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
R++ ++ N ++ + K G++D AR +F +P K+V SW+
Sbjct: 367 ISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWS 426
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MISG A N ++ ++L+ MI V PN+ T V V + A G + + R +A
Sbjct: 427 TMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGR--WAHEYVC 484
Query: 364 HSIVP-NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA-AIWGSLLSSCRTHGHVELA 421
+ ++P N ++D+ + G + A D+ R + + + + W +++ HGH L+
Sbjct: 485 NKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 544
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 40/292 (13%)
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E + LK C + GQ +H +++ GF I ++ +Y CG + +FD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
S D + N+M+ G+ K ++ LF +M ER VS+ MI L ++ EA+ +
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQW------------------------IH 255
F +MR +E T+ +V+ C+ +G G W +H
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIG----GIWNCRMLHALVIKLHFFGLVLISTNLLH 236
Query: 256 SYAESSGL-----------YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
Y S L R VS N ++ Y K G++D AR +F+ IP ++V SW
Sbjct: 237 MYCVFSSLKDTKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVFSWAI 295
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
MI G R + LY M + PN+ V +L+ C + +E+ R+
Sbjct: 296 MIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQF 347
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 247/458 (53%), Gaps = 34/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H ++ + + + V + ++K A + M + V+ +NS++ + +G
Sbjct: 286 QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 345
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE ++LF + + D+YTF +L C+ VG + + VHG II++GFE +
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYK---- 399
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V N ++ + K GD+D +F +M E+ V+S
Sbjct: 400 ---------------------------LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVIS 432
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W +++ ++ E+L++F +MR D+ V ++L CA L ++ G+ +H
Sbjct: 433 WTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SGL R SV N+LV Y KCG LD A +F + K+V++W A+I G A NG+G +
Sbjct: 493 KSGL-RWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSL 551
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ Y+ M++ G P+ TF+G+L C+HAGLV++ R+ F M ++ I P EHY CM+D+
Sbjct: 552 KFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDL 611
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GRSG + EA L+ M ++P+A +W SLLS+CR H ++ELAE A L LEP N+ Y
Sbjct: 612 FGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPY 671
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSN+Y+ +W+D +R M+ + K PG S +E
Sbjct: 672 VMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLE 709
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 207/506 (40%), Gaps = 107/506 (21%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY-------------- 75
++Q+N +L +S G +N+ A K+F++M +N+MI +Y
Sbjct: 65 IYQTNQLLNQ-LSKSGQVND---ARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFD 120
Query: 76 -----------------SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
G E LF ++ G ++T +L+ C +G ++
Sbjct: 121 GCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQT 180
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ +HG ++++GFE + G+V++Y C + + +F
Sbjct: 181 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLF-------------------- 220
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
KGL E ++ V W M++ ++G +A+ F M Q E ++ T +
Sbjct: 221 -----KGL----EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTI 271
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L C+ + A G+ +H + SG + V V +ALVD Y KCG L A+N+ + + +
Sbjct: 272 LTACSSVLARCFGEQVHGFIVKSG-FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDD 330
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
VVSWN+++ G +G E + L++ M + + + TF VL CC + K+
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLI 390
Query: 359 SMTGL--HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM-------------------- 396
TG + +V N +VD+ ++G + AY + M
Sbjct: 391 IKTGFENYKLVSN-----ALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 445
Query: 397 --------------SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNSGNYVL 441
+ P+ I S+LS+C +E + + I W+ Y
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNV 467
L +YA+ G DDA+ + + M+ +V
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDV 531
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 135/330 (40%), Gaps = 54/330 (16%)
Query: 1 IERKILRL---LHGRNTRT-----------------HLTQIHAHFLRHKLHQSNLILAHF 40
+E + LRL +HGRN + + +H ++ L+
Sbjct: 346 LEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNAL 405
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
V + ++ A +F +M V+ + S++ Y+ N EE +K+F ++ G+ PD+
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+ A +L AC + L G+ VH + I+SG S+ +V +Y CG +DD +F
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
M +DVI +W +I ++G+ +L+ +
Sbjct: 526 MQVKDVI-------------------------------TWTAIIVGYAQNGKGRNSLKFY 554
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYC 279
M D T + +L C+ G VD G ++ + G+ + ++D +
Sbjct: 555 DAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGI-KPGPEHYACMIDLFG 613
Query: 280 KCGILDTARNVFKEIPRK-NVVSWNAMISG 308
+ G LD A+ + ++ K + W +++S
Sbjct: 614 RSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 48/268 (17%)
Query: 156 KVFDEMSHRDVIVRNL------MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
K+ DE + + VI+ H CK + ++ S+ N +++ L K
Sbjct: 18 KITDERTVQQVIMHKFSSKVLSFPHNPCKFMAFLRSIHTTTAASYESIYQTNQLLNQLSK 77
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
SG+ ++A +LF +M + D W
Sbjct: 78 SGQVNDARKLFDKMPQK----------------------DEYSW---------------- 99
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
N ++ Y G L AR +F K+ ++W+++ISG G +L+ M +G
Sbjct: 100 --NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEG 157
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
++ T VL C+ GL++ E+ + N+ +VD+ + CV EA
Sbjct: 158 WKASQFTLGSVLRVCSSLGLIQTG-EMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEA 216
Query: 390 YDLIRSMSI-RPNAAIWGSLLSSCRTHG 416
L + + R N +W ++++ +G
Sbjct: 217 EFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 42/436 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+MI Y+ G ++ ++LF + + PDE T A ++ A
Sbjct: 157 IESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSA 216
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++ ++ + +S+
Sbjct: 217 CAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN------ 270
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
+ V+SWN +I EAL LF EM
Sbjct: 271 -------------------------KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA+DIG+WIH Y + K V V NA L+D Y KCG
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKK---LKGVVVTNASSLRTSLIDMYAKCGD 362
Query: 284 LDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+D A V +++ +WNAMI G A +GR +++ +M G+ P+ TFVG+L+
Sbjct: 363 IDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 422
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
C+H+G+++ R +F SM ++I P LEHYGCM+D+LG SG +EA ++I +M + P+
Sbjct: 423 ACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDG 482
Query: 403 AIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM 462
IW SLL +C+ HG++EL E K+LI +EP N G+YVLLSNIYA G+W++ +R +
Sbjct: 483 VIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLL 542
Query: 463 RENNVKKS-PGQSLIE 477
+ +KK PG S IE
Sbjct: 543 NDKGMKKKVPGCSSIE 558
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 207/394 (52%), Gaps = 4/394 (1%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H + L F + + + YA +F + P+ L++N M + ++L+ +KL+ +
Sbjct: 6 HYAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVV 65
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ +LG+ P+ +TF LLK+C + GQ +HG +++ GF+ + ++ +Y G+
Sbjct: 66 MISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGR 125
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
++D KVFD SHRDV+ +I G+ +G ++ +F E+ + VVSWN MIS ++
Sbjct: 126 LEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAET 185
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G +AL LF EM + DE+T+ V+ CA+ G++++G+ +HS+ G + + +
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG-FGSNLKI 244
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+D Y KCG ++TA + + + K+V+SWN +I G + + L+++M+ G
Sbjct: 245 VNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 304
Query: 331 SPNKATFVGVLTCCAHAGLVEKAR--ELFASMTGLHSIVPNLEHY-GCMVDVLGRSGCVR 387
+PN T + +L CAH G ++ R ++ +V N ++D+ + G +
Sbjct: 305 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDID 364
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
A + S + + + W +++ HG A
Sbjct: 365 AAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAA 398
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 258/489 (52%), Gaps = 28/489 (5%)
Query: 2 ERKILRLLHGRNTRTHLT-QIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIF 57
E +L LL NT T QIH H LH + C + + + Y+ ++F
Sbjct: 9 EEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLF 68
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVG-D 115
+ NP ++N++I++ S + ++ F LL++ + PD ++FA LK G
Sbjct: 69 HHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCS 128
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
R G +H R GF+ + ++ +Y CG + KVFDEMS +V+ N ++
Sbjct: 129 KRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTA 188
Query: 176 FCKKG-----DVDKGL--YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+ G V G +F EM+ R SW+ MI KSG +A F E+
Sbjct: 189 CFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRN 248
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
E ++ VL CA+ GA + G+ +H + E +G + +VSV NAL+D Y KCG +D A+
Sbjct: 249 RPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAG-FLCIVSVNNALIDTYSKCGNVDMAK 307
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF N+ LA +GR + + ++ +M GV P+ TF+ +L C+H+G
Sbjct: 308 LVF------NI--------SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSG 353
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LVE+ LF+ M + I P +EHYGCMVD+ GR+ +++AY+ IR M I PN IW +L
Sbjct: 354 LVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTL 413
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L +C HG++ELAE L ++P NSG++VLLSN+YA G+W D +R M E ++K
Sbjct: 414 LGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMK 473
Query: 469 KSPGQSLIE 477
K PG S+IE
Sbjct: 474 KIPGWSMIE 482
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/459 (33%), Positives = 255/459 (55%), Gaps = 3/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H H ++ + Q + + +++ G I+ A +FNQ+ + + + S++ A +
Sbjct: 24 KLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQAN 83
Query: 80 PSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ +F A+ K G+ PD Y FA L+KAC +G ++ G+ VH I S ++
Sbjct: 84 LPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVK 143
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V++Y CG D G VFD +S ++ I MI G+ + G + LF++M ++++
Sbjct: 144 SSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLL 203
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSY 257
SW +IS L +SG ++ LF EMR + ++ D + +++ A L + +G+ IH
Sbjct: 204 SWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCL 263
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
G Y + V NALVD Y KC + A+ +F + ++++VSW ++I G A +G E
Sbjct: 264 VILLG-YESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEE 322
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ LY +M++ G+ PN+ TFVG++ C+H GLV K R F SM + I P+L+HY C++
Sbjct: 323 ALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLL 382
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+L RSG + EA +LI++M +P+ A W +LLS+C H + + L++L+P +
Sbjct: 383 DLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPS 442
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
Y+LLSNIYA W+ +R M VKK PG S I
Sbjct: 443 TYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCI 481
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 33/236 (13%)
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L+AC +G+ +H II++G ++ S+ ++ +Y CG + D + +F+++ HRD
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I SW ++++ ++ L +F M Q
Sbjct: 70 I-------------------------------SWASILTANNQANLPHLTLSMFPAMFKQ 98
Query: 227 -AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ D ++ CA LGA+ G+ +H+ S + V V ++LVD Y KCG+ D
Sbjct: 99 DGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV-VKSSLVDMYAKCGLPD 157
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
R VF I KN +SW AMISG A +GR ++L+++M K + A G++
Sbjct: 158 IGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLV 213
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 252/439 (57%), Gaps = 23/439 (5%)
Query: 50 IKYATKIFN-QMRNPSVLLFNSMIKAYSLNGPSEE---PVKLFALLKNLGIWPDEYTFAP 105
I YA IF+ + L+N +I+A N S + P+ ++ ++N + PD +TF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL + L +GQ H +I+ G ++ +R ++ +Y+SCG + +VFD+ +D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR- 224
+ N +++ + K G +D LF EM ER+V+SW+ +I+ G+ EAL LF EM+
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 225 ---DQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
++AF +E T+ VL C RLGA++ G+W+H+Y + + +V +G AL+D Y K
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIV-LGTALIDMYAK 246
Query: 281 CGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFV 338
CG L+ A+ VF + +K+V +++AMI LA G + +L+ +M + ++PN TFV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
G+L C H GL+ + + F M I P+++HYGCMVD+ GRSG ++EA I SM +
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+ IWGSLLS R G ++ E A+K LI L+P NSG YVLLSN+YA+ GRW +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEG--- 423
Query: 459 RMWMRENNVKKSPGQSLIE 477
+ K PG S +E
Sbjct: 424 --------INKVPGCSYVE 434
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 259/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R + + V + K A ++F+ +R+ + + + +I + G
Sbjct: 315 QLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYG 374
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E ++LF ++ + D++ A ++ C D+ + + +H ++SG R I
Sbjct: 375 CFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN 434
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + + +F M RD++ M+ + + G++ K F M R+V++
Sbjct: 435 SLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVIT 494
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + L+++ M + + D T V + CA +GA +G I +
Sbjct: 495 WNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHT 554
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL SV NA++ Y KCG + AR +F + RK++VSWNAMI+G + +G G+
Sbjct: 555 VKVGLILDT-SVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQA 613
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E+++ M+ KG P+ ++V VL+ C+H+GLV++ + F + H++ P LEH+ CMVD
Sbjct: 614 IEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVD 673
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+L R+G + EA +LI M ++P A +WG+LLS+C+THG+ ELAE A K L +L+ +SG
Sbjct: 674 LLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGG 733
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LL+ IYA+ G+ D+ +R MR+ +KK+PG S +E
Sbjct: 734 YMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWME 772
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 212/427 (49%), Gaps = 19/427 (4%)
Query: 25 FLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
LR + + N+I H + + G L + A ++F +M V +N+++ Y +G
Sbjct: 85 LLRGDITEPNVI-THNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFL 143
Query: 83 EPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
+ ++ F ++ G P+ +TF +K+C +G V + G + + GF+ + G+
Sbjct: 144 DAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGI 203
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
V+++ CG +D K F ++ V RN M+ G+ K VD L LF M ER VVSWN
Sbjct: 204 VDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWN 263
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
+M+S+L +SGR EAL + +M ++ LD T + L CA+L ++ G+ +H+ S
Sbjct: 264 MMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS 323
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
L V +A+V+ Y KCG AR VF + +N VSW +I G G +EL
Sbjct: 324 -LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLEL 382
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA-SMTGLHS---IVPNLEHYGCMV 377
+ QM A+ ++ ++ +++ C++ + AR+L + S+ H+ ++ N ++
Sbjct: 383 FNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN-----SLI 437
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWN 435
+ + G ++ A + SM R + W +L++ G++ A + N+ WN
Sbjct: 438 SMYAKCGNLQNAESIFSSMEER-DIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWN 496
Query: 436 S--GNYV 440
+ G Y+
Sbjct: 497 AMLGAYI 503
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 160/376 (42%), Gaps = 52/376 (13%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
A L++C G L + +HG ++ G ++ ++ Y SCG + D + +
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
++ +VI N+M++G+ K G + LF M R V SWN ++S +SGR +A+ F
Sbjct: 90 ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149
Query: 221 HEMRDQ------------------------------------AFELDEATVVAVLPICAR 244
MR F+ D ++ + R
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA 304
GAVD + S + R V N+++ Y K +D A +F+ +P ++VVSWN
Sbjct: 210 CGAVDFAS-----KQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNM 264
Query: 305 MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
M+S L+ +GR + + M +GV + T+ LT CA + ++L A +
Sbjct: 265 MVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVI--- 321
Query: 365 SIVPNLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HV 418
+P ++ Y MV++ + GC +EA + S+ R N W L+ +G +
Sbjct: 322 RSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR-NTVSWTVLIGGFLQYGCFSESL 380
Query: 419 ELAEHAVKELINLEPW 434
EL EL+ ++ +
Sbjct: 381 ELFNQMRAELMTVDQF 396
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 248/425 (58%), Gaps = 10/425 (2%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+ M ++ +NSM+ Y+ NG ++ F + D ++ ++ +
Sbjct: 46 ARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAER----DVVSWNLMVDGFVE 101
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
VGDL +I + ++ G + G++ + ++FD+M R+V+ N M
Sbjct: 102 VGDLNSSWEFFEKIPNPNTVSWVTMLCG----FARFGKIAEARRLFDQMPIRNVVAWNAM 157
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + + VD+ + LF EM E++ +SW +I+ + G+ EA +L ++M + + D+
Sbjct: 158 IAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN-KPDQ 216
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
+T L CA L A+ +G+ +H SG Y + V NAL+ Y KCG + +A +FK
Sbjct: 217 STFACGLSSCAHLAALQVGKQLHQLVMKSG-YATDLFVSNALITMYAKCGSISSAELLFK 275
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+I +VVSWN++I+ A NG G ++L+ +M +GV+P++ TFVG+L+ C+H GL+++
Sbjct: 276 DIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQ 335
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+LF M ++I P EHY CMVD+LGR+G + EA+ L+R M I NA IWG+LL +C
Sbjct: 336 GLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGAC 395
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
R HG++ELA+ A ++L+ EP + NYVLLSN+ AE GRWD+ +R M+E +K PG
Sbjct: 396 RIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPG 455
Query: 473 QSLIE 477
S IE
Sbjct: 456 WSWIE 460
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 165/371 (44%), Gaps = 65/371 (17%)
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V Y Q D+ ++FD M +D++ N M+ G+ + G++ GL F EM ER VVS
Sbjct: 32 AMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVS 91
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC--ARLGAVDIGQWIHSY 257
WNLM+ + G + + F ++ + TV V +C AR G +
Sbjct: 92 WNLMVDGFVEVGDLNSSWEFFEKIP------NPNTVSWVTMLCGFARFGKI--------- 136
Query: 258 AESSGLYRKV----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
AE+ L+ ++ V NA++ Y + +D A ++F E+P KN +SW +I+G G
Sbjct: 137 AEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMG 196
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF---------------- 357
+ + +L QM + P+++TF L+ CAH ++ ++L
Sbjct: 197 KLDEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN 255
Query: 358 ---------ASMTGLHSIVPNLEHY-----GCMVDVLGRSGCVREAYDLIRSMSIR---P 400
S++ + +++H+ ++ +G REA L M + P
Sbjct: 256 ALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAP 315
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVK------ELINLEPWNSGNYVLLSNIYAEGGRWDD 454
+ + +LS+C HV L + +K + N+EP + +Y + ++ GR ++
Sbjct: 316 DEVTFVGILSAC---SHVGLIDQGLKLFKCMVQAYNIEPL-AEHYACMVDLLGRAGRLEE 371
Query: 455 AETLRMWMREN 465
A L M+ N
Sbjct: 372 AFQLVRGMKIN 382
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NA+V Y K D AR +F +P K++VSWN+M++G NG LG++ +E+M + V
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
G + G + + E F + PN + M+ R G + EA
Sbjct: 91 SWNLMVDGFV----EVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEARR 141
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
L M IR N W +++++ + HV + A+ + + NS ++ + N Y G+
Sbjct: 142 LFDQMPIR-NVVAWNAMIAAYVQNCHV---DEAISLFMEMPEKNSISWTTVINGYVRMGK 197
Query: 452 WDDAETLRMWMRENNVKKSPGQS 474
D+A L + + + P QS
Sbjct: 198 LDEARQL---LNQMPYRNKPDQS 217
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 13/207 (6%)
Query: 30 LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA 89
L SN ++ + CG+ I A +F + + V+ +NS+I AY+LNG E +KLF
Sbjct: 251 LFVSNALITMYAK-CGS---ISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFH 306
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSIRIGVVELYTSC 148
++ G+ PDE TF +L AC VG + G + ++++ E +V+L
Sbjct: 307 KMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRA 366
Query: 149 GQMDD------GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL 202
G++++ GMK+ ++ IHG + L E ++ L
Sbjct: 367 GRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLL--EFEPHKTSNYVL 424
Query: 203 MISSLGKSGRDSEALRLFHEMRDQAFE 229
+ + ++GR E R+ M+++ E
Sbjct: 425 LSNMQAEAGRWDEVARVRRLMKEKGAE 451
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 246/462 (53%), Gaps = 5/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IHA + + ++ +++ G A ++F++M+ ++ +N MI Y LNG
Sbjct: 228 KIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNG 287
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E ++L+ L G + TF +L AC V L G+ VH I+ G + ++
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG---DVDKGLYLFREMRERS 196
+V +Y CG +++ KVF+ M +RD + + +I + G D K +F + R
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIH 255
+SWN MI++ ++G A+++F EM A + D T +AVL CA LG + + +H
Sbjct: 408 TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ S L VV V N L++ Y +CG L+ A +F K VVSW AM++ + GR
Sbjct: 468 AQISESELESNVV-VTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRY 526
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+++M +GV P+ T+ +L C H G +E+ F M LH++ P +H+
Sbjct: 527 AEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAA 586
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGRSG + +A +L+ SM P+ W + L++CR HG +EL E A + + L+P +
Sbjct: 587 MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSS 646
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ Y+ +SNIYA G W+ ++R M E +KK PG S IE
Sbjct: 647 TAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIE 688
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 196/434 (45%), Gaps = 44/434 (10%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--RNPSVLLFNSMIKAYSLN 78
+H + + ++ +S+ G + + A +F M R +V+ +N+MI AY+ N
Sbjct: 29 LHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQN 88
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G S E + L+ + G+ D TF +L AC L G+ +H + SG + F S+
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLA 145
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V +Y G + D ++F + RD N +I + GD
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGD----------------- 188
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
W S ALR+F EM+ + + T + V+ + + G+ IH+
Sbjct: 189 -W-------------SGALRIFKEMKCDV-KPNSTTYINVISGFSTPEVLPEGRKIHAEI 233
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
++G +V V AL++ Y KCG AR VF ++ ++++VSWN MI NG
Sbjct: 234 VANGFDTDLV-VATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEA 292
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGCM 376
+ELY+++ +G KATFV +L C+ + + R + + + GL S V +
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT---AL 349
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
V++ + G + EA + +M R +A W +L+ + ++G+ + A A K L ++
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT 408
Query: 437 GNYVLLSNIYAEGG 450
++ + Y + G
Sbjct: 409 ISWNAMITTYVQNG 422
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/510 (21%), Positives = 209/510 (40%), Gaps = 105/510 (20%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH L + V++ + A ++F ++ +N++I A+S +G
Sbjct: 128 EIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSG 187
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+++F +K + P+ T+ ++ L G+ +H EI+ +GF+ +
Sbjct: 188 DWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVAT 246
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + +VFD+M RD++ N+MI + GD
Sbjct: 247 ALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF----------------- 289
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
EAL L+ ++ + F+ +AT V++L C+ + A+ G+ +HS+
Sbjct: 290 --------------HEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHIL 335
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE--- 316
GL + V+V ALV+ Y KCG L+ AR VF + ++ V+W+ +I A NG G+
Sbjct: 336 ERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDAR 394
Query: 317 -------------------------------LGVELYEQMI-AKGVSPNKATFVGVLTCC 344
++++ +M A G+ P+ TF+ VL C
Sbjct: 395 KARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEAC 454
Query: 345 AHAGLVEKARELFA---------------SMTGLHSIVPNLEH---------------YG 374
A G + + + L A ++ +++ +LE +
Sbjct: 455 ASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWT 514
Query: 375 CMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEH---AVKEL 428
MV + G EA DL + M ++P+ + S+L C G +E + EL
Sbjct: 515 AMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAEL 574
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
L P + ++ + ++ GR DA+ L
Sbjct: 575 HALAP-TADHFAAMVDLLGRSGRLFDAKEL 603
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 35/302 (11%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PD TF +L +C GD+ G+ +H I S FER + ++ +Y C + D V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+ M + R+R+VVSWN MI++ ++G +EAL
Sbjct: 65 FESM-----------------------------DWRQRNVVSWNAMIAAYAQNGHSTEAL 95
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
L+ M Q D T V+VL C+ L G+ IH+ SGL S+ NALV
Sbjct: 96 VLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGL-DSFQSLANALVTM 151
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y + G + A+ +F+ + ++ SWNA+I + +G + ++++M V PN T+
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTY 210
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ V++ + ++ + R++ A + + +L ++++ G+ G EA ++ M
Sbjct: 211 INVISGFSTPEVLPEGRKIHAEIVA-NGFDTDLVVATALINMYGKCGSSHEAREVFDKMK 269
Query: 398 IR 399
R
Sbjct: 270 KR 271
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 272/541 (50%), Gaps = 66/541 (12%)
Query: 1 IERKILRLLHGRNTRT-HLTQIHAHFLRHKLHQSNLILAHFV-SVCGTLNEIKYATKIFN 58
+ ILR L T QIH + L Q L V ++C + +++A +F
Sbjct: 57 LSHPILRTLESCCGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFE 116
Query: 59 QMRNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA-------- 109
+ P + N++++ Y ++N P + + + P+ YTF L+K
Sbjct: 117 GLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIG 176
Query: 110 ------------------------------CLGVGDLRV------------------GQC 121
C +GD R G
Sbjct: 177 DGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYV 236
Query: 122 VHGEI--IRSGFERFGSIRI----GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
+GEI R FE + ++ Y G M +F++M RD++ N MI G
Sbjct: 237 KNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDG 296
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ + +++ LF M R+VVSWN+M++ + E LR+F +M + +EAT+
Sbjct: 297 YAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMP-NEATL 355
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+VL CA LG +D G+WIHSY +++ + V + AL+ Y KCG +D AR+VF ++
Sbjct: 356 VSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMS 415
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++VVSWN+MI G +G+ + +E++ M +G PN ATF+ VL+ CAH+G++ +
Sbjct: 416 NRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWW 475
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M + I P +EHYGCMVD+LGR+G +++ +LIR M + A+WG+LLS+CRTH
Sbjct: 476 YFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTH 535
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
+ ELAE K LI LEP + G Y+LLSNIYA G+WDD E +R M+E + K+ G S
Sbjct: 536 SNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSW 595
Query: 476 I 476
+
Sbjct: 596 V 596
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 207/329 (62%), Gaps = 1/329 (0%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G + ++FD M + ++ M+ + K G++D LF M ER V WN+MI
Sbjct: 107 GDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYT 166
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++G +EAL LF M + +E TV++VL C +LGA++ G+W+HSY E++G+ V
Sbjct: 167 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNV- 225
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VG ALVD Y KCG L+ AR VF +I K+VV+WN+MI G A +G + ++L++ M
Sbjct: 226 HVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRM 285
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
G+ P TF+G+L+ C H+G V + ++F M + I P +EHYGCMV++LGR+G V +
Sbjct: 286 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQ 345
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
AY+L+++M+I P+ +WG+LL +CR HG + L E V+ L++ NSG Y+LLSNIYA
Sbjct: 346 AYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAA 405
Query: 449 GGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G WD LR M+++ VKK PG S IE
Sbjct: 406 VGNWDGVARLRTMMKDSGVKKEPGCSSIE 434
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A +F+ M + +N MI Y+ NG E + LF + P+E T +L
Sbjct: 139 ELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLS 198
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G+ VH I +G + + +V++Y+ CG ++D VFD++ +DV+
Sbjct: 199 ACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVA 258
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNL----MISSLGKSGRDSEALRLFHEMR 224
N MI G+ G + L LF+ M + N+ ++S+ G SG +E +F++M+
Sbjct: 259 WNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMK 318
Query: 225 DQ 226
D+
Sbjct: 319 DE 320
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN-----PSVLLFNSMIKA 74
Q+ R LH +N+ +S CG + IFN+M++ P + + M+
Sbjct: 277 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 336
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
G E+ + L+KN+ I PD + LL AC G + +G+ + ++
Sbjct: 337 LGRAGHVEQA---YELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 393
Query: 135 GSIRIGVVELYTSCGQMD 152
G+ I + +Y + G D
Sbjct: 394 GTY-ILLSNIYAAVGNWD 410
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 247/439 (56%), Gaps = 5/439 (1%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
VS+ ++ A +F M S++ +N++I Y+ NG +K F+ +L + P
Sbjct: 419 MVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D +T +L AC + L++G+ +H I+R+G I ++ Y G ++ ++
Sbjct: 479 DAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIM 538
Query: 159 DE--MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D+ ++ +VI ++ G+ K GD + +F M R V++W MI ++G++ EA
Sbjct: 539 DQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEA 598
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF M E + T+ AVL CA L +D G+ IH A S L + VSV NA++
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRS-LQEQSVSVSNAIIT 657
Query: 277 FYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y + G + AR VF +I RK ++W +MI +A +G GE V L+E+M+ GV P+
Sbjct: 658 VYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHI 717
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+VGVL+ CAHAG V+K + + M H IVP + HY CMVD+ R+G + EA++ I+
Sbjct: 718 TYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQR 777
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+ +WGSLL++CR + +LAE A +L++++P NSG Y L+N+Y+ GRW+DA
Sbjct: 778 MPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDA 837
Query: 456 ETLRMWMRENNVKKSPGQS 474
+ ++ VKK G S
Sbjct: 838 ARIWKLRKDKGVKKETGFS 856
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 39/404 (9%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+F +M + + + MI + +G + VK F + + G P ++T +L +C +
Sbjct: 303 VFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEA 362
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
VG+ VH +++ G + V+ +Y CG + VF+ M R V N+M+
Sbjct: 363 CGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSL 422
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEAT 234
+ +G ++ + +F M ERS+VSWN +I+ ++G D AL+ F M + E D T
Sbjct: 423 YTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFT 482
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGL-------------YRKVVSVG---------- 271
V +VL CA L + +G+ +HSY +G+ Y K SV
Sbjct: 483 VTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAV 542
Query: 272 ---------NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELY 322
AL++ Y K G AR +F + ++V++W AMI G NG+ + +EL+
Sbjct: 543 VADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELF 602
Query: 323 EQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA-SMTGLHSIVPNLEHYGCMVDVLG 381
MI G PN T VL+ CA ++ +++ ++ L ++ + ++ V
Sbjct: 603 RSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSN--AIITVYA 660
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
RSG V A + + R W S++ + HG L E AV
Sbjct: 661 RSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG---LGEQAV 701
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 11/273 (4%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ----MDDGMKVF 158
+A LL+ C + G+ +H +++G + ++ Y S G + +F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 159 DEMSH--RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
D++ + R+ N ++ + K G + +F EM +R VSW +MI L +SGR +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
++ F +M + F + T+ VL CA + A +G+ +H + GL V V N+++
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGL-SSCVPVANSVLY 390
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +TAR VF+ + ++V SWN M+S GR EL V ++E M+ + + +
Sbjct: 391 MYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VS 446
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+ ++ GL A + F+ M S+ P+
Sbjct: 447 WNTIIAGYNQNGLDGMALKFFSRMLSASSMEPD 479
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLN 78
QIH +R QS + ++V + A ++F+Q+ + + SMI A + +
Sbjct: 635 QIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
G E+ V LF + +G+ PD T+ +L AC G + G+
Sbjct: 695 GLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGK 736
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 253/442 (57%), Gaps = 19/442 (4%)
Query: 41 VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL--KNLGIWP 98
+S G + + A K F++M +V+ + SMI Y G E LF + K+L W
Sbjct: 174 ISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASW- 232
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEII--RSGFERFGSIRIGVVELYTSCGQMDDGMK 156
+ G + +G CV+ II + GS I ++ + G+++
Sbjct: 233 ----------NVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNI-MISGFCKAGELESAKD 281
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
FD M +++VI +M+ G+ K GD + LF +M +++V+W+ MI ++G+ +A
Sbjct: 282 FFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKA 341
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALV 275
L LF ++Q + DE ++ ++ C++LG +D + IH+Y S L + V +L+
Sbjct: 342 LELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSD--LRVFTSLI 399
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y KCG ++ A +F+ K+++ ++ MI+ LA +G G + L+++M + P+
Sbjct: 400 DMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSV 459
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF+GVLT C H GLV++ R+ F MT I P+ +HY C+VD+LGR GC+ EAY+LIR+
Sbjct: 460 TFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRN 519
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I P++ +WG+LL++CR H +V+LAE A EL +EP NSGNY+LLSNIYA GRW
Sbjct: 520 MPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSV 579
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+R +RE+ V+K+ G S IE
Sbjct: 580 AKVRAKIREHRVRKNRGSSWIE 601
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 211/436 (48%), Gaps = 27/436 (6%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFL-RHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
IL ++H T L IHA L + S ++ + + YA K+F+++ P
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ L+ S+I Y N +E LF ++ I +T + +LKA + + GQ V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G +++ GF ++ V++L+ C ++D + FDEM +D++ N+MI G+ VD
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM--RDQAF-------ELDEAT 234
F M ER+VVSW MI K+G +EA LF M +D A +D
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244
Query: 235 VVAVLPICARLGAVDIGQW---IHSYAESSGLY-----------RKVVSVGNALVDFYCK 280
V I ++ D G W I + ++ L + V+S G ++D Y K
Sbjct: 245 CVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWG-IMLDGYIK 303
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
G + AR +F ++P KN+V+W+ MI G A NG+ +EL+E+ + + P++ +G+
Sbjct: 304 NGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGI 363
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
++ C+ G+++ A + + G S++ +L + ++D+ + G + +A + M+
Sbjct: 364 ISACSQLGIIDAAESIIHNYVG-PSLLSDLRVFTSLIDMYAKCGSIEKALQMFE-MAHPK 421
Query: 401 NAAIWGSLLSSCRTHG 416
+ + +++++ HG
Sbjct: 422 DLLCYSTMIAALANHG 437
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 247/434 (56%), Gaps = 35/434 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG + + K ++F +MR + + SMI ++ NG + + +F +K + D+YTF
Sbjct: 222 CGRVEDSK---RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTF 278
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC GV L+ G+ VH IIR+ ++
Sbjct: 279 GSVLTACGGVMALQEGKQVHAYIIRTDYKD------------------------------ 308
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
++ V + ++ +CK ++ +F++M ++VVSW M+ G++G EA++ F +M
Sbjct: 309 -NIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ E D+ T+ +V+ CA L +++ G H+ A +SGL ++V NALV Y KCG
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI-SFITVSNALVTLYGKCGS 426
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ + +F EI K+ V+W A++SG A G+ + L+E M+A G+ P+K TF+GVL+
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSA 486
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+ AGLVEK ++F SM H IVP +HY CM+D+ R+G + EA + I M P+A
Sbjct: 487 CSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAI 546
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
W +LLSSCR +G++++ + A + L+ L+P N+ +YVLLS++YA G+W++ LR MR
Sbjct: 547 SWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMR 606
Query: 464 ENNVKKSPGQSLIE 477
+ ++K PG S I+
Sbjct: 607 DKGLRKEPGCSWIK 620
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 224/447 (50%), Gaps = 40/447 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+L+L + T +H+H ++ + +L + +S L I YA K+F+QM +P+
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFA--------------------------------LLK 92
+ +N+++ AYS G E LF +LK
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 93 NLGIWP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
N G + + TF+ LL G +++G+ +HG +++ GF + + +V++Y+ G +
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMI 194
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
KVFDE+ ++V++ N +I G + G V+ LF EMRER +SW MI+ ++G
Sbjct: 195 SCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNG 254
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
D +A+ +F EM+ + ++D+ T +VL C + A+ G+ +H+Y + Y+ + V
Sbjct: 255 LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YKDNIFVA 313
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
+ALVD YCKC + +A VFK++ KNVVSW AM+ G NG E V+ + M G+
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFAS--MTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
P+ T V++ CA+ +E+ + A +GL S + +V + G+ G + ++
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITV---SNALVTLYGKCGSIEDS 430
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ L +S + + W +L+S G
Sbjct: 431 HRLFNEISFK-DEVTWTALVSGYAQFG 456
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 165/365 (45%), Gaps = 39/365 (10%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
+ LLK C + + +H II++ + ++ Y G + KVFD+M
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
H ++ N ++ + K G V + YLF M R VSWN +IS G ++++ ++
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 223 M--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M D +F L+ T +L + ++ G V +G+ IH + G + V VG+ LVD Y K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFG-FMSYVFVGSPLVDMYSK 190
Query: 281 CGILDTARNVFKEIPRKNVV-------------------------------SWNAMISGL 309
G++ AR VF E+P KNVV SW +MI+G
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
NG ++++ +M + + ++ TF VLT C +++ +++ A + N
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDN 309
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+ +VD+ + ++ A + + M+ + N W ++L +G+ +E AVK
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGY---SEEAVKTFS 365
Query: 430 NLEPW 434
+++ +
Sbjct: 366 DMQKY 370
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 214/373 (57%), Gaps = 31/373 (8%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
L+ AC + + G+ +H ++SGF +V++Y G + K FDEM+ RD
Sbjct: 573 LISACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRD 632
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V N MI G+ + GD++ L LFR M R+V SW MIS ++G+ ++AL +F M +
Sbjct: 633 VPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEE 692
Query: 226 QA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ +E T+ +VLP CA LGA+++G+ I YA +G Y K + V NAL++ Y +CG +
Sbjct: 693 ETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNG-YFKNLYVSNALLEMYARCGRI 751
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
D A VF+EI +GR E G +P+ TFVGVL C
Sbjct: 752 DKAWGVFEEI-----------------DGRRE------------GAAPDDVTFVGVLLAC 782
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H G+V + + F SM SI P LEHYGCMVD+LGR+G +REA+DLI M + P++ +
Sbjct: 783 THGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVV 842
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
WG+LL +C HGHVELAE A L LEP N GNYV+LSNIYA GRWD LR M+
Sbjct: 843 WGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKG 902
Query: 465 NNVKKSPGQSLIE 477
+ K+ G S IE
Sbjct: 903 GKITKAAGYSFIE 915
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 49/275 (17%)
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
A++ CA L + G+ +H++ SG V ++ ALVD Y K G+L AR F E+
Sbjct: 572 ALISACASLSSHQQGRMLHTHFVKSGFGCDVFAL-TALVDMYAKLGLLSLARKQFDEMTV 630
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS------------------------- 331
++V +WN+MI+G A G E +EL+ M A+ V+
Sbjct: 631 RDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMM 690
Query: 332 -------PNKATFVGVLTCCAHAGLVEKAR--ELFASMTGLHSIVPNLEHYGCMVDVLGR 382
PN+ T VL CA+ G +E E++A G NL ++++ R
Sbjct: 691 EEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFK---NLYVSNALLEMYAR 747
Query: 383 SGCVREAYDLIRSMSIR-----PNAAIWGSLLSSCRTHGHVELAEHAVKEL---INLEPW 434
G + +A+ + + R P+ + +L +C G V +H + + ++ P
Sbjct: 748 CGRIDKAWGVFEEIDGRREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAP- 806
Query: 435 NSGNYVLLSNIYAEGGRWDDAET--LRMWMRENNV 467
+Y + ++ G +A LRM M ++V
Sbjct: 807 KLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSV 841
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 54/279 (19%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H HF++ L V + L + A K F++M V +NSMI Y+ G
Sbjct: 589 LHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGD 648
Query: 81 SEEPVKLFALL--KNLGIW------------------------------PDEYTFAPLLK 108
E ++LF L+ +N+ W P+E T A +L
Sbjct: 649 LEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLP 708
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR---- 164
AC +G L VG+ + +G+ + + ++E+Y CG++D VF+E+ R
Sbjct: 709 ACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRREGA 768
Query: 165 ---DVIVRNLMI---HGFCKKGDVDKGLYLFREM-RERSVVS----WNLMISSLGKSGRD 213
DV +++ HG G V +G + F M R+ S+ + M+ LG++G
Sbjct: 769 APDDVTFVGVLLACTHG----GMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGEL 824
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
EA L M E D +L C+ G V++ +
Sbjct: 825 REAHDLILRM---PMEPDSVVWGTLLGACSFHGHVELAE 860
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/441 (33%), Positives = 260/441 (58%), Gaps = 12/441 (2%)
Query: 45 GTLNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
G L E+ +I ++M P+++ +N ++ ++ +G +E V +F + +LG PD+
Sbjct: 196 GCLEEV---VRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQ 252
Query: 101 YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
T + +L + +L +G+ +HG +I+ G + + ++++Y G + +K+FDE
Sbjct: 253 VTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDE 312
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER----SVVSWNLMISSLGKSGRDSEA 216
+ V N I G + G VDK L +F +E+ +VVSW +I+ ++G+D EA
Sbjct: 313 FEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF EM+ + + T+ ++LP C + A+ G+ H +A L V VG+AL+D
Sbjct: 373 LELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDV-HVGSALID 431
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG + ++ VF +P KN+V WN++++G + +G+ + + ++E ++ + P+ +
Sbjct: 432 MYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F +L+ C GL ++ + F M+ + I P LEHY CMV++LGR+G ++EAYDLI+ +
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEI 551
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
P++ +WG+LL+SCR +V+LAE A ++L +LEP N G YVL+SNIYA G W + +
Sbjct: 552 PFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVD 611
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
++R M +KK+PG S I+
Sbjct: 612 SIRNKMESLGLKKNPGCSWIQ 632
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 42/440 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ HA L+ I A ++ N A I + +P+V F+S+I A +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + +F+ + + G+ PD + L K C + + G+ +H SG + ++
Sbjct: 95 KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----E 194
+ +Y CG+M D KVFD MS +DV+ + ++ G+ +KG +++ + + EM E
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
++VSWN ++S +SG EA+ +F +M F D+ TV +VLP +++G+ I
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCG-----------------------ILDTARN-- 289
H Y GL + + +A++D Y K G I +RN
Sbjct: 275 HGYVIKQGLLKDKCVI-SAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333
Query: 290 ---------VFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+FKE + NVVSW ++I+G A NG+ +EL+ +M GV PN+ T
Sbjct: 334 VDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPS 393
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C + + R +H ++ ++ ++D+ + G ++ + ++ +M
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVH-LLDDVHVGSALIDMYAKCGRIKMS-QIVFNMMPT 451
Query: 400 PNAAIWGSLLSSCRTHGHVE 419
N W SL++ HG +
Sbjct: 452 KNLVCWNSLMNGYSMHGKAK 471
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L HGR+T ++H L +H + ++ + CG IK + +FN M +
Sbjct: 401 IAALGHGRSTHGFAVRVH---LLDDVHVGSALIDMYAK-CG---RIKMSQIVFNMMPTKN 453
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
++ +NS++ YS++G ++E + +F L + PD +F LL AC VG
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 254/467 (54%), Gaps = 43/467 (9%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q HA L+ L + ++ V+ C + + YA IF QM P FN+M++ +
Sbjct: 4 FKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMMRGH 63
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ +EE + + + G+ PD +T+ LLKAC + + G VH I++ G E
Sbjct: 64 VKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLEN-- 121
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
DV V+N +I + K G++ +F +M ER
Sbjct: 122 -----------------------------DVFVQNSLISMYGKCGEIGVCCAVFEQMNER 152
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAVLPICARLGAVDIGQWI 254
SV SW+ +I++ G S+ LRL +M ++ + +E+ +V+VL C LGA+D+G+ +
Sbjct: 153 SVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSV 212
Query: 255 HSYAESSGLYRKV----VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
H + L R V V V +L++ Y KCG L +F+++ +KN +S++ MISGLA
Sbjct: 213 HGF-----LLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLA 267
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G G G+ ++ +M+ +G+ P+ +VGVL C+HAGLV++ + F M H I P +
Sbjct: 268 MHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTI 327
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+HYGCMVD++GR+G + EA +LI+SM + PN +W SLLS+ + H +++ E A K+L
Sbjct: 328 QHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFK 387
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ + +YV+LSN+YA+ RW+D R M + + PG SL+E
Sbjct: 388 LDSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVE 434
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 248/459 (54%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H LR + ++ ++ + K+F++M V+ +NSMI YS G
Sbjct: 147 EVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGG 206
Query: 80 PSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
E+ L+ + + G P+ T +L+AC DL G VH I+ + E S+
Sbjct: 207 LYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVC 266
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++ LY CG +D ++FDEMS +D + +I G G VD+ L LFR M+ + +
Sbjct: 267 NALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILS 326
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+WN +I+ L ++ R L L EM+ F + T+ +VL A ++ G+ IHSYA
Sbjct: 327 TWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYA 386
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G +R + V A++D Y K G L A+ VF + +++V W A+IS A +G L
Sbjct: 387 IKIGYHRNIY-VATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLA 445
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ L+ +M+ +G+ P+ TF VL CAH G+V+KA E+F SM + I P +EHY C+V
Sbjct: 446 LGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVG 505
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
LG++ + EA + + M I P+A +WG+LL VEL + L +EP N+GN
Sbjct: 506 ALGKARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGN 565
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+++N+Y++ GRW +A+ +R M + ++K PG S IE
Sbjct: 566 YVIMANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIE 604
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 71/437 (16%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + N + + V++ N + +A +F+Q+ + + +N+M+ +YSL+
Sbjct: 45 QLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHN 104
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKA--CLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ + LF+ L + + + + LLK+ + D+++G+ VHG ++R+GF+ +
Sbjct: 105 RHGDALDLFSSLASSNL-VNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFV 163
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ Y+ C +D KVFD M+ RDV+ N MI G+ + G + L+REM + S
Sbjct: 164 ENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFS- 222
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
F + TVV+VL C + + G +H +
Sbjct: 223 -----------------------------GFRPNGVTVVSVLQACGQTQDLAFGMEVHKF 253
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV----------------- 300
+ + +SV NAL+ Y KCG LD AR +F E+ K+ V
Sbjct: 254 IVDNQV-EIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQ 312
Query: 301 --------------SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
+WNA+I+GL N R E ++L +M A G PN T VL+ A+
Sbjct: 313 SLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAY 372
Query: 347 AGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
++ +E+ +A G H N+ ++D+ +SG +R A + R + I
Sbjct: 373 FSSLKGGKEIHSYAIKIGYHR---NIYVATAIIDMYAKSGYLRGAQRVFDQSKDR-SLVI 428
Query: 405 WGSLLSSCRTHGHVELA 421
W +++S+ HG LA
Sbjct: 429 WTAIISAYAVHGDANLA 445
>gi|297842491|ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334968|gb|EFH65386.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 466
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/488 (33%), Positives = 251/488 (51%), Gaps = 51/488 (10%)
Query: 5 ILRLLHGRNTRTHLTQIHA--HFLRHKL---------HQSNLILAHFVSVCGTLNEIK-- 51
++ LHG HL H HF+ N +LA +S C +L ++
Sbjct: 6 LISKLHGTKRTNHLKIFHRLNHFVTISSSSSITSLSPQDRNKLLATLLSNCTSLARVRRI 65
Query: 52 ----YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+ + I +Q P L+N+++++Y + + V+++ + + PD YT ++
Sbjct: 66 HGDIFRSCILDQY--PIAFLWNNIMRSYIRHDSPLDSVQVYLGMVRSNVLPDRYTLPIVI 123
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
KA + + D +G+ +H +R GF V DE I
Sbjct: 124 KAAVQIHDFPLGKQLHSVAVRLGF-------------------------VGDEFCESGFI 158
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+CK G+++ +F E ER + SWN +I L +GR +EA+ +F EMR
Sbjct: 159 TL------YCKAGELENARNVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFMEMRRSG 212
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-VSVGNALVDFYCKCGILDT 286
FE D+ T+V+V C LG +++ +H + K V + N+L+D Y KCG +D
Sbjct: 213 FEPDDFTMVSVTSACGGLGDLNLAFQLHKCVLQAKTEEKSDVMMMNSLIDMYGKCGRMDF 272
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
A VF+E+P++NVVSW++MI+G A NG +E + QM GV PNK TFVGVL+ C H
Sbjct: 273 AIQVFEEMPQRNVVSWSSMITGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVH 332
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
GLVE+ + FA M ++ P L HYGC+VD+L R G ++EA ++ M ++PN +WG
Sbjct: 333 GGLVEEGKAYFAMMKSEFNLEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWG 392
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
L+ C G VE+AE ++ LEPWN G YV+L+N+YA G W D E +R M+E
Sbjct: 393 CLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALKGMWKDVERVRKVMKEKK 452
Query: 467 VKKSPGQS 474
V K P S
Sbjct: 453 VAKIPAYS 460
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 275/502 (54%), Gaps = 56/502 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS--VLLFNSMIKAYSL 77
Q+HA L L L V++ + + +YA IF+ + S V L+ + + +Y+
Sbjct: 26 QLHAQLLLRGL---PLPARAAVTLIASSSSPQYARAIFDSVPAASANVYLWTATVSSYAK 82
Query: 78 NGP---SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ--C-VHGEIIRSGF 131
+ + E LF + G P+ +T + +LK+ + LR C VHG ++++G
Sbjct: 83 HASPALAAEAFPLFMFMLRSGPRPNGFTVSSVLKS---LSKLRAAHQVCQVHGFLVKAGL 139
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV--------- 182
+ +++ Y + ++ D +VFDEM +V+V N M+ G+ K GDV
Sbjct: 140 ASSLHVGATLLDSYGNLCRVKDARRVFDEMPRSNVVVGNAMVSGYVKAGDVEAARQVFDG 199
Query: 183 --------------------DKGLY--LFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
D GL LF EM +R+V SWN+MIS+ + G ++++ +F
Sbjct: 200 MVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAVF 259
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK-----VVSVGNALV 275
++MR +F D AT+ ++ CA+LG + + + ++ GL RK V N+LV
Sbjct: 260 NQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVY------GLLRKGCVEMNCHVHNSLV 313
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG A +F E+ K+VVS+N M+S LA +G G+ ++L+EQMI G+ P+
Sbjct: 314 DMFAKCGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAV 373
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF+GVL+ CAHAGLV+ + F +M ++I + +HY CMVD+ GR G + EA+ ++
Sbjct: 374 TFLGVLSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKI 433
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M ++P+A IWG+LL++CR H ++++ E A +ELI +EP N GNYVLLSN A +WD
Sbjct: 434 MPVKPHAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDAV 493
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+R MR N + K+ G S +E
Sbjct: 494 GDVRQLMRGNGIDKNTGFSWVE 515
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 135/368 (36%), Gaps = 94/368 (25%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
+L+ L + Q+H ++ L S + A + G L +K A ++F++M
Sbjct: 113 SVLKSLSKLRAAHQVCQVHGFLVKAGLASSLHVGATLLDSYGNLCRVKDARRVFDEMPRS 172
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLF------------------------ALLKNL----- 94
+V++ N+M+ Y G E ++F L ++L
Sbjct: 173 NVVVGNAMVSGYVKAGDVEAARQVFDGMVERDSISWNTLMSGYLRRGDAGLARDLFDEMP 232
Query: 95 -----------------GIWPDEY----------------TFAPLLKACLGVGDLRVGQC 121
G+W D T A L+ AC +G L V +
Sbjct: 233 QRNVNSWNMMISACSEVGLWADSVAVFNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQ 292
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
V+G + + E + +V+++ CG + +F EM +DV+ N+M+
Sbjct: 293 VYGLLRKGCVEMNCHVHNSLVDMFAKCGCFSEAHLLFAEMDPKDVVSYNVMV-------- 344
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
S+L G +AL+LF +M + + D T + VL
Sbjct: 345 -----------------------SALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGVLSA 381
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA G VD G++ ++ K +VD Y + G+++ A K +P K
Sbjct: 382 CAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKPHAG 441
Query: 302 -WNAMISG 308
W A+++
Sbjct: 442 IWGALLNA 449
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 255/461 (55%), Gaps = 37/461 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H L L ++ V + ++ +A ++F+ M +V L+N +I+AY+ G
Sbjct: 83 QLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREG 142
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
P E V+L+ + G+ PD +T+ +LKAC + DL G+ VH + + + + +
Sbjct: 143 PREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCA 202
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
GVV++Y CG +DD VFD ++ RD +V
Sbjct: 203 GVVDMYAKCGCVDDARAVFDGIAVRDAVV------------------------------- 231
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA- 258
WN MI++ G++GR EAL L +M AT+V+ + A A+ G+ +H +
Sbjct: 232 WNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGW 291
Query: 259 -ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
GL K+ + +LVD Y K G + AR +F+++ ++ +VSWNAMI G +G +
Sbjct: 292 RRGFGLQDKLKT---SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADE 348
Query: 318 GVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ L+ +M V+P+ TFVGVL+ C H G+VE+A+E F M +SI P ++HY C+
Sbjct: 349 ALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCV 408
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
+DVLG +G EAYDLI+ MSI P++ IWG+LL+ C+ H +VEL E A+++LI LEP ++
Sbjct: 409 IDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDA 468
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYV LSNIYA+ G+W+ A +R M +KK S IE
Sbjct: 469 GNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIE 509
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L++C+ G LR G+ +HG ++ SG + +V+LY +CGQ+ ++FD M R+
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V + N++I + ++G + + L+R M E V
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGV---------------------------- 159
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
E D T VL CA L ++ G+ +H S + + V V +VD Y KCG +D
Sbjct: 160 ---EPDNFTYPLVLKACAALLDLETGREVHQRV-SGTRWGQDVFVCAGVVDMYAKCGCVD 215
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
AR VF I ++ V WN+MI+ NGR + L M A G+ P AT V ++ A
Sbjct: 216 DARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAA 275
Query: 346 HAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
A + + REL F G + L+ +VD+ +SG V+ A L + R
Sbjct: 276 DAAALPRGRELHGFGWRRGF-GLQDKLK--TSLVDMYAKSGWVQVARVLFEQLMKR-ELV 331
Query: 404 IWGSLLSSCRTHGHVELA 421
W +++ HGH + A
Sbjct: 332 SWNAMICGYGMHGHADEA 349
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 258/482 (53%), Gaps = 38/482 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFN 58
+ ++L LL+ ++ HL +IHA L L + + V + N + +F+
Sbjct: 30 KHQLLSLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFH 89
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ + + +N +I+ YS + +E + LF ++ G+ P+ TF LLKAC + L+
Sbjct: 90 CHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQE 149
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H I+ G + +R ++ Y SC +M KV
Sbjct: 150 GKQFHAIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKV--------------------- 188
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
F EM ER++VSWN +I++ ++ EA+ F +M + FE DE T+V +
Sbjct: 189 ----------FDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVI 238
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA LG + +G+W+HS G+ V +G A VD Y K G + AR+VF + +K+
Sbjct: 239 LSACAELGNLSLGRWVHSQVVGRGMVLNV-QLGTAFVDMYAKSGDVGCARHVFNCLKQKS 297
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V +W+AMI GLA +G +EL+ M++ + PN TF+GVL C+HAGLV+K+ F
Sbjct: 298 VWTWSAMILGLAQHGFANEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFN 357
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR---TH 415
M ++ I P + HYG MVDVLGR+G V+EAY+LI SM + P+ +W +LLS+C +
Sbjct: 358 LMERVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVN 417
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G E+AE A K L+ LEP GN V+++N +AE G W A R M++ +KK G+S
Sbjct: 418 GGAEVAEEARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESC 477
Query: 476 IE 477
IE
Sbjct: 478 IE 479
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/474 (32%), Positives = 257/474 (54%), Gaps = 3/474 (0%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L + +IHA ++ L+Q + + G N ++ A +F++M
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 66 LLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ + S++ AY+ + + +F + + PD + +A LLKAC + LR+G+ VH
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+ S F ++ +V++Y CG VFD + + + M+ G+ + G D+
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE 188
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL-DEATVVAVLPICA 243
+ LF R++ SW +IS L +SG + +F EMR + ++ D + +V+ CA
Sbjct: 189 AMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACA 248
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L + +G+ IH SG Y + + NALVD Y KC + ARNVF + ++VVSW
Sbjct: 249 NLAVLGLGKQIHGLVIGSG-YESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWT 307
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
++I G A +GR + ++LY+QM+ + PN+ TFVG++ C+HAGLV K R+LF +M
Sbjct: 308 SIIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIED 367
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+ I P+L+ + C +D+L RSG + EA DLI++M +P+ W +LLS+C+ HG+ E+
Sbjct: 368 YRISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVR 427
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L++L YVLLSN+YA G+W+ +R M + VK+ PG S I+
Sbjct: 428 IADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSID 481
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 259/495 (52%), Gaps = 47/495 (9%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H I HF L +NL+ H V +L + K ++FN+M + + +N M+K Y
Sbjct: 387 HALVIKLHFFGLVLISTNLL--HMYCVFSSLKDTK---RLFNEMPVRNTVSWNVMLKGYV 441
Query: 77 LNGPSEEPVKLF-------------------------------ALLKNLGIWPDEYTFAP 105
+G ++ +LF + ++ + P+E
Sbjct: 442 KSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVD 501
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL AC + G+ H I+++GF F I+ ++ Y +C ++D +
Sbjct: 502 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSH 561
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+ N+MI GF K G +D+ +F M E+ V SW+ MIS ++ AL LFH M D
Sbjct: 562 LTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 621
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN----ALVDFYCKC 281
E +E T+V+V A LG + G+W H Y + KV+ + + A++D Y KC
Sbjct: 622 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEY-----VCNKVIPLNDNLSAAIIDMYAKC 676
Query: 282 GILDTARNVFKEIPRKN--VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G +DTA +VF++I K V WNA+I GLA +G L +E++ + + + N TF+G
Sbjct: 677 GSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLG 736
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ C HAGLVE F SM H + PN++HYGC+VD+LGR G +REA +++R+M ++
Sbjct: 737 VLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMK 796
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
+ IWG+LL+S RTHG VE+ E A + L L+P + VLLSN+YA+ G W+DA +R
Sbjct: 797 ADVVIWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVR 856
Query: 460 MWMRENNVKKSPGQS 474
++ + +SPG S
Sbjct: 857 RAIQSQRMIRSPGYS 871
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 201/420 (47%), Gaps = 38/420 (9%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N++++ +V L +++ A ++F +M + + +MI + N E +++F +++
Sbjct: 302 NIMMSGYVK----LRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRS 357
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
G+ P+E T A ++ AC +G + + +H +I+ F I ++ +Y + D
Sbjct: 358 AGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKD 417
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++F+EM R+ + N+M+ G+ K G VD+ LF + ER V SW +MI + R
Sbjct: 418 TKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRL 477
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY--------- 264
+AL L+ MR +E +V +L C + +++ G+ HS +G
Sbjct: 478 RKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATI 537
Query: 265 -------RKV--------------VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
R++ ++ N ++ + K G++D AR +F +P K+V SW+
Sbjct: 538 ISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWS 597
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
MISG A N ++ ++L+ MI V PN+ T V V + A G + + R +A
Sbjct: 598 TMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGR--WAHEYVC 655
Query: 364 HSIVP-NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA-AIWGSLLSSCRTHGHVELA 421
+ ++P N ++D+ + G + A D+ R + + + + W +++ HGH L+
Sbjct: 656 NKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 715
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 32/288 (11%)
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E + LK C + GQ +H +++ GF I ++ +Y CG + +FD
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 291
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
S D + N+M+ G+ K ++ LF +M ER VS+ MI L ++ EA+ +
Sbjct: 292 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH------------------------ 255
F +MR +E T+ +V+ C+ +G + + +H
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 256 --SYAESSGLY-----RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
S ++ L+ R VS N ++ Y K G++D AR +F+ IP ++V SW MI G
Sbjct: 412 FSSLKDTKRLFNEMPVRNTVS-WNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDG 470
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
R + LY M + PN+ V +L+ C + +E+ R+
Sbjct: 471 FVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQF 518
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 250/452 (55%), Gaps = 9/452 (1%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-A 89
H N+I++ + S G NE A + +QM P+++ +NS+I +G +E + +F
Sbjct: 81 HSWNIIISAY-SRSGLFNE---AHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 90 LLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
+LK + DE+T L+ +C +G + + VHG I G I +++ Y C
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKC 196
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G+ D +F M RDV+ M+ + + ++ +LF +M+E++ VSW +I+
Sbjct: 197 GEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFA 256
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL--YRK 266
++GR EAL LF +MR++ T +VL CA L + G+ IH + S Y
Sbjct: 257 QNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFC 316
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ + NAL+D YCKCG + +A +FK + K++VSWN++I+G A NG GE + ++E+MI
Sbjct: 317 NIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMI 376
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
+ PN TF+G+L+ C H GLV + + SM + + P +HY M+D+LGR+ +
Sbjct: 377 EADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRL 436
Query: 387 REAYDLI-RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
EA LI R+ + +WG+LL +CR HG+++LA A + L LEP N+ YV++ NI
Sbjct: 437 EEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNI 496
Query: 446 YAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YA RWD+A +R M E ++K S IE
Sbjct: 497 YAAASRWDEARQVRRLMMERGLRKEAACSWIE 528
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 163/395 (41%), Gaps = 113/395 (28%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG--FERFGSIRIGVVELYTSCGQMDDGM 155
P ++ L+ C+ L++G+ +H I++ F F + R+ ++ Y+ C +
Sbjct: 12 PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRL--IDFYSKCDSIQSAH 69
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
KVF + V+N SWN++IS+ +SG +E
Sbjct: 70 KVFHVLP-----VKNTH--------------------------SWNIIISAYSRSGLFNE 98
Query: 216 ALRLFHEM--------------------RDQAFEL-------------DEATVVAVLPIC 242
A L +M R ++ + DE T+V+++ C
Sbjct: 99 AHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSC 158
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP------- 295
A LGA ++ + +H A GL ++ +GNAL+D Y KCG D + ++F +P
Sbjct: 159 ASLGAPELLRQVHGAAIIIGLNSNII-IGNALIDAYGKCGEPDISFSIFSRMPERDVVSW 217
Query: 296 ------------------------RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
KN VSW A+I+G A NGRG+ + L+EQM +G+
Sbjct: 218 TSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIP 277
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC-------MVDVLGRSG 384
P+ TF VL+ CA L+ + +E+ H I Y C ++D+ + G
Sbjct: 278 PSAFTFASVLSACADLALIARGKEIHG-----HIIRSTCIDYFCNIFILNALIDMYCKCG 332
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+R A L + M + W SL++ +GH E
Sbjct: 333 QMRSATTLFKGMH-EKDIVSWNSLITGFAQNGHGE 366
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 43/269 (15%)
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC--------------- 281
+++ C + +G+ +HS+ + L + N L+DFY KC
Sbjct: 19 SLISKCITTRHLKLGKLLHSHFIKTALIFTTF-LANRLIDFYSKCDSIQSAHKVFHVLPV 77
Query: 282 ----------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
G+ + A N+ ++P+ N+VS+N++ISGL +G + + +++ M
Sbjct: 78 KNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTM 137
Query: 326 IAK--GVSPNKATFVGVLTCCAHAGLVEKARELF--ASMTGLHSIVPNLEHYGCMVDVLG 381
+ + V ++ T V ++ CA G E R++ A + GL+S N+ ++D G
Sbjct: 138 LKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNS---NIIIGNALIDAYG 194
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
+ G ++ + M R + W S++++ +E A + ++ N+ ++
Sbjct: 195 KCGEPDISFSIFSRMPER-DVVSWTSMVAAYAQASRLEDAHWLFSQ---MQEKNTVSWTA 250
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKS 470
L +A+ GR D+A L MRE + S
Sbjct: 251 LIAGFAQNGRGDEALHLFEQMREEGIPPS 279
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/427 (34%), Positives = 248/427 (58%), Gaps = 3/427 (0%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A +F ++ N ++ + ++I Y E + ++ + + G P++ L+
Sbjct: 280 VDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISG 339
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + GQ + +++ GF+ + I+ ++ LY +CG++++ F S +V
Sbjct: 340 CGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASW 399
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N +I G+ + +D+ + LF EM ER V SW+ MIS ++ + + AL LFH+M +
Sbjct: 400 NALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIK 459
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+E T+V+VL A G + G+W H Y ++ + ++ A++D Y KCG ++ A
Sbjct: 460 PNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSD-NLSAAIIDMYAKCGSINNALE 518
Query: 290 VFKEIPRK--NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
VF EI K V WNA+I GLA +G L ++++ + + + N TF+GVLT C H
Sbjct: 519 VFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHV 578
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLVE + F SM HSI P+++HYGCMVD+LGR+G + EA ++IRSM ++ + IWG+
Sbjct: 579 GLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGT 638
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LL++CRTHG+V++ E A + L LEP + + VLLSN+YA+ G+W+DA +R M+ + +
Sbjct: 639 LLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRM 698
Query: 468 KKSPGQS 474
++ PG S
Sbjct: 699 QRLPGYS 705
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 204/413 (49%), Gaps = 36/413 (8%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ YA ++F++M + + +MI +S N + V+LF ++N+G+ P+E T A L+
Sbjct: 147 QLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVS 206
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
A G + + +HG +I+ FE F + ++ +Y C + + +FDEM ++++
Sbjct: 207 AYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVS 266
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N+M++G+ K G VD +F + + +V+W +I + R +EAL ++ M +
Sbjct: 267 WNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGW 326
Query: 229 ELDEATVVAVLPICARLGAVDIGQW--------------------IHSYA------ESSG 262
E ++ +V ++ C R A+ GQ IH YA E+
Sbjct: 327 EPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACL 386
Query: 263 LYR----KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+R + V+ NAL+ Y + ++D A +F E+P ++V SW+ MISG N + L
Sbjct: 387 QFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLA 446
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL+ +M+A G+ PN+ T V VL+ A +G +++ R + +SI + ++D
Sbjct: 447 LELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHN-NSITVSDNLSAAIID 505
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAI---WGSLLSSCRTHGHVELAEHAVKEL 428
+ + G + A ++ IR A+ W +++ HGH L+ +L
Sbjct: 506 MYAKCGSINNALEVF--YEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDL 556
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 32/295 (10%)
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E LK C L G+ +H + +SG I+ ++ +Y CG + D +FD
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
D + N+MI G+ K G +D LF EM + VS+ MI ++ ++A+ L
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F +MR+ +E T+ ++ + G + + +H L+ + V V L+ YC
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKM-LFEEFVLVSTNLLRMYC 244
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG------------------------RG 315
C L AR +F E+P KN+VSWN M++G + G G
Sbjct: 245 VCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDG 304
Query: 316 ELGVE-------LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+ VE +Y MI+ G PN V +++ C + + ++L +++ +
Sbjct: 305 YVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKM 359
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N ++ Y K G LD A +F E+P K VS+ MI G + N VEL++QM GV
Sbjct: 136 NVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVV 195
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL--EHYGCMVDVLGRSGCV--- 386
PN+ T +++ +H G + R LH +V + E + + L R CV
Sbjct: 196 PNEVTIATLVSAYSHFGGIWACRM-------LHGLVIKMLFEEFVLVSTNLLRMYCVCSS 248
Query: 387 -REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EA L M N W +L+ G V+ A + + N
Sbjct: 249 LVEARALFDEMP-EKNIVSWNVMLNGYSKAGFVDSARVVFERIPN 292
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 247/461 (53%), Gaps = 33/461 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L +IH + LRH QS+ ++A+ FV+ + YA +F M + V +N++I +
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHV 478
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
NG + + L+ L++ G+ PD +T A LL AC + L G+ +HG ++R+GFE
Sbjct: 479 QNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEF 538
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
I I +V LY CG++ FD M E++
Sbjct: 539 ICISLVSLYVQCGKILLAKLFFDNM-------------------------------EEKN 567
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V WN MI+ ++ +AL +FH+M DE +++ L C+++ A+ +G+ +H
Sbjct: 568 LVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHC 627
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+A S L V +L+D Y KCG ++ ++N+F + K V+WN +I+G +G G
Sbjct: 628 FAVKSHLTEHSF-VTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGR 686
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL++ M G P+ TF+ +LT C HAGLV + E M L I P LEHY C+
Sbjct: 687 KAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACV 746
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EA +L+ + +P++ IW SLLSSCR + +++ E +L+ L P +
Sbjct: 747 VDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKA 806
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYVL+SN YA G+WD+ +R M+E ++K G S IE
Sbjct: 807 ENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIE 847
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 33/342 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H L+ K+ + +++ G ++ A K+F++M +++ +NS++ A NG
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 81 SEEPVKLFALLKN--LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
EE LF L N G+ PD T ++ C G++R+G HG ++ G +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y+ CG + + +FD + ++VI N MI G+ K D L R+M
Sbjct: 338 SSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKM------ 390
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
+M D+ +++E T++ VLP+C + IH YA
Sbjct: 391 -----------------------QMEDKV-KVNEVTLLNVLPVCEEEIQFLKLKEIHGYA 426
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
G + V NA V Y KCG L A VF + K V SWNA+I G NG
Sbjct: 427 LRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKA 486
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
++LY M G+ P+ T +L+ CA + +E+ SM
Sbjct: 487 LDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 37/305 (12%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW-PDEYTFAPLLKACLGVG 114
+FN R ++ L+N+++ Y N + V +F + +L + PD +T ++KAC+GV
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
D+R+G+ VHG +++ + ++ +Y G ++ +KVFD+M
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP------------ 258
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR--DQAFELDE 232
+R++VSWN ++ + ++G E+ LF + D+ D
Sbjct: 259 -------------------QRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDV 299
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
AT+V V+P+CAR G V +G H A GL + + V ++L+D Y KCG L AR +F
Sbjct: 300 ATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGE-LKVNSSLLDMYSKCGYLCEARVLF- 357
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVE 351
+ KNV+SWN+MI G + + EL +M + V N+ T + VL C
Sbjct: 358 DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFL 417
Query: 352 KAREL 356
K +E+
Sbjct: 418 KLKEI 422
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 7/225 (3%)
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELDEATVVAVLPICARLG 246
+F R +++ WN ++S ++ +A+ +F EM F D T+ V+ C +
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
V +G+ +H +A + + V VGNAL+ Y K G +++A VF ++P++N+VSWN+++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVF-VGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVM 269
Query: 307 SGLAFNGRGELGVELYEQMI--AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
NG E L++ ++ +G+ P+ AT V V+ CA G V + +F +
Sbjct: 270 YACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEV-RLGMVFHGLALKL 328
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+ L+ ++D+ + G + EA L + N W S++
Sbjct: 329 GLCGELKVNSSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMI 371
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 7/196 (3%)
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+L +C ++IG+ IH++ +S ++ V + LV Y C + VF RK
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVE--KAR 354
N+ WNA++SG N V ++ +MI+ P+ T V+ C V +A
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
FA T ++ ++ ++ + G+ G V A + M R N W S++ +C
Sbjct: 219 HGFALKT---KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLE 274
Query: 415 HGHVELAEHAVKELIN 430
+G E + K L+N
Sbjct: 275 NGVFEESYGLFKGLLN 290
>gi|302142959|emb|CBI20254.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 243/461 (52%), Gaps = 41/461 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L ++A ++ +Q ++ F++ C + I YA F M+ P+V ++N+MI+A
Sbjct: 28 LESVYASMIKANANQDCFLMNQFIAACSIFHRIDYAILAFTHMQEPNVFVYNAMIRALVQ 87
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ + + + + P +TF+ L+KAC V +L G+ VHG I + GF+ +
Sbjct: 88 CYHPVQALDCYLDMVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFV 147
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ +V+ Y + G++ + +VFDEMS RDV MI + GD+ LF EM R+
Sbjct: 148 QTALVDFYGNAGKIVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNT 207
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
SWN MI + A LF +M ++ DI W
Sbjct: 208 ASWNAMIDGYSRLRNVESAELLFSQMPNR----------------------DIISW---- 241
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
++ Y + LD + VF ++ +KN+ WN++I GLA +G E
Sbjct: 242 --------------TTMIACYSQNKHLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEE 287
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+ ++ +M + + PN TF+ VL C HAGLVE+ R+ F SM+ SI P +EHYGCMV
Sbjct: 288 ALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMV 347
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LG++G + +A +L+RSM + PN+ IWG+LL C+ H ++++A+ AV E LEP NSG
Sbjct: 348 DLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNNSG 407
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-SPGQSLIE 477
Y LL N+YAE RW + +R M+E V+K SPG S IE
Sbjct: 408 YYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIE 448
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 216/360 (60%), Gaps = 5/360 (1%)
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE--MSHRDVIVRNLMIHGFCKK 179
HG+ ++ G + +++LY + G + D +VFD + D N M+ G+ K
Sbjct: 138 AHGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKC 197
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GD++ +F M ER +VSW+ MI + ++G SEALR+F +M F D + +VL
Sbjct: 198 GDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVL 257
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKV--VSVGNALVDFYCKCGILDTARNVFKEIPRK 297
CA LGA++ G+W+H + ++ GL R V + ALVD YCKCG +D A VF + +
Sbjct: 258 KACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQ 317
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+VV WNAMI GLA NG G+ +EL+ +M+ G PN++TFV VL C H G V++ +E+F
Sbjct: 318 DVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIF 377
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM H I P EHYGC+ D+LGR+G + EA ++ M + P+A+ WG+L+SSC H +
Sbjct: 378 RSMCD-HGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNN 436
Query: 418 VELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V + E K+LI LEP + G YV+L N+YA G W+DA+ LR M E KK G S IE
Sbjct: 437 VGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIE 496
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
VS G +++ A ++F +M ++ +++MI A G E +++F + G PD
Sbjct: 190 MVSGYGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPD 249
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS---IRIGVVELYTSCGQMDDGMK 156
+ +LKAC +G L G+ VH + G R + +V++Y CG MD+
Sbjct: 250 AVVLSSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWW 309
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD + +DV++ N MI G G + L LFR
Sbjct: 310 VFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFR-------------------------- 343
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
M D F +E+T V VL C G VD G+ I G+ + G L D
Sbjct: 344 -----RMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYG-CLAD 397
Query: 277 FYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSPNK- 334
+ G+L+ A V ++P + S W A++S + +G + +++I + P+
Sbjct: 398 LLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIE--LEPDDG 455
Query: 335 ATFVGVLTCCAHAGLVEKAREL 356
+V + A GL E A+ L
Sbjct: 456 GRYVVLFNLYAVNGLWEDAKAL 477
>gi|125587880|gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 259/478 (54%), Gaps = 15/478 (3%)
Query: 2 ERKILRLLHGRNT--RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
E+ L LL + R+ Q+HAH + LH + + + +++ A +F
Sbjct: 12 EQTFLSLLKSVDAERRSVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRC 71
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ N M+ Y G S + ++ F + + GI D+YT LL C + +G
Sbjct: 72 APTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIGVDQYTAVALLACCGRLKKAVLG 131
Query: 120 QCVHGEIIRSGFERFGSIRIGVV------ELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ VHG ++R R G G++ ++Y CG+M+ M+VFDE RD I N M+
Sbjct: 132 RSVHGVVVR----RIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMV 187
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
GF G +D F E R ++SWN +++ + S + LFH+M + D+
Sbjct: 188 AGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVIPDKV 247
Query: 234 TVVAVLPICARLGAVDIGQWIHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T V ++ A G ++ + +H + + G ++ +ALVD YCKCG + A VF+
Sbjct: 248 TAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLA--SALVDMYCKCGSIKLAYAVFE 305
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ K+V W AMISGLAF+G G++ ++L+ +M A+G PN T V VL+ C+HAGL ++
Sbjct: 306 KAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDE 365
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
++F ++ +I P +EH+GCMVD+L RSG + +A DL R M ++P+ +IWGS+LS+
Sbjct: 366 GCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLARRMPMKPSRSIWGSILSAS 425
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+ E+AE A KEL+ LEP G YVLLSN+YA G+W+ + +R M V+KS
Sbjct: 426 SACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWNYSNEVRENMERKGVRKS 483
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 150/358 (41%), Gaps = 66/358 (18%)
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
I PDE TF LLK+ + VG+ VH ++ +G +R ++++Y G ++
Sbjct: 8 IHPDEQTFLSLLKS-VDAERRSVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAE 66
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+F D + N+M+ G+ K G K L FR M R +
Sbjct: 67 AMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGI------------------ 108
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS-YAESSGLYRKVVSVGNAL 274
+D+ T VA+L C RL +G+ +H G+ + + + NAL
Sbjct: 109 -------------GVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNAL 155
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE-------------- 320
+D Y KCG ++TA VF E ++ +SWN M++G A G +L +
Sbjct: 156 LDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWN 215
Query: 321 -----------------LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
L+ M+A V P+K T V +++ A G + AR + +
Sbjct: 216 ALLAGYARYEEFSATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKE 275
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + +VD+ + G ++ AY + ++ + +W +++S HGH ++A
Sbjct: 276 HGTQDSF-LASALVDMYCKCGSIKLAYAVFEK-AVDKDVTLWTAMISGLAFHGHGDVA 331
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 254/464 (54%), Gaps = 45/464 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGT----LNEIKYATKIFNQMRNP-SVLLFNSMIKA 74
+HA +++ H + L L F+ C + +YA + + P +N++I+
Sbjct: 14 NLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPYNAVIRH 73
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+L+ PS + LF+ + + D +TF +LK+ C+H +++ GF
Sbjct: 74 VALHAPSLA-LALFSHMHRTNVPFDHFTFPLILKS-----SKLNPHCIHTLVLKLGF--- 124
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
H ++ V+N +I+ + G + L LF EM
Sbjct: 125 ----------------------------HSNIYVQNALINSYGTSGSLHASLKLFDEMPR 156
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL--DEATVVAVLPICARLGAVDIGQ 252
R ++SW+ +IS K G EAL LF +M+ + ++ D +++V+ + LGA+++G
Sbjct: 157 RDLISWSSLISCFAKRGLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGI 216
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
W+H++ G+ VS+G+AL+D Y +CG +D + VF E+P +NVV+W A+I+GLA +
Sbjct: 217 WVHAFISRIGV-NLTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVH 275
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
GRG +E + M+ G+ P++ F+GVL C+H GLVE+ R +F+SM + I P LEH
Sbjct: 276 GRGREALEAFYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEH 335
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
YGCMVD+LGR+G V EA+D + M +RPN+ IW +LL +C H + LAE A + + L+
Sbjct: 336 YGCMVDLLGRAGMVLEAFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELD 395
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
P + G+YVLLSN Y G W E +R MRE+ + K PG SL+
Sbjct: 396 PHHDGDYVLLSNAYGGVGNWVKKEGVRNSMRESKIVKEPGLSLV 439
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 259/459 (56%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA +R+ + + V + K A +FN + + + + + +I + +G
Sbjct: 291 QLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHG 350
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E V+LF ++ + D++ A L+ C DL +G+ +H ++SG + +
Sbjct: 351 CFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 410
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y C + +F M+ +D++ MI + G++ K F M ++V++
Sbjct: 411 SLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVIT 470
Query: 200 WNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN M+ + + G + + LR+++ M ++ D T V + CA LGA +G I
Sbjct: 471 WNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 530
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
GL SV NA++ Y KCG + AR VF + K++VSWNAMI+G + +G G+
Sbjct: 531 VKVGLILDT-SVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQA 589
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+E+++ ++ +G P+ ++V VL+ C+H+GLV++ + F M +H+I P LEH+ CMVD
Sbjct: 590 IEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVD 649
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA DLI M ++P A +WG+LLS+C+ HG+ ELAE A K + L+ +SG+
Sbjct: 650 LLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGS 709
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+L++ IYA+ G+ DD+ +R MR+ +KK+PG S +E
Sbjct: 710 YMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWME 748
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 171/338 (50%), Gaps = 13/338 (3%)
Query: 15 RTHLTQI-HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
R LT I H + + H N++L +V L + A ++F +M V +N+++
Sbjct: 60 RLLLTDIAHPNVITH-----NVMLNGYVK----LGRLSDAVELFGRMPARDVASWNTLMS 110
Query: 74 AYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
Y + ++ F + G P+ +TFA +K+C +G+ + + G + + G +
Sbjct: 111 GYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQ 170
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ +V+++ CG +D ++F + + RN M+ G+ K VD L LF M
Sbjct: 171 DDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSM 230
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
ER VVSWN+M+S+L +SGR EAL + +M+ + LD T + L CARL ++ G+
Sbjct: 231 PERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGK 290
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
+H+ + L V +ALV+ Y KCG A+ VF + +N V+W +I+G +
Sbjct: 291 QLHAQVIRN-LPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQH 349
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLT-CCAHAGL 349
G VEL+ QM A+ ++ ++ +++ CC+ L
Sbjct: 350 GCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 44/372 (11%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF-DE 160
FA L++C G L + +HG ++ G ++ ++ Y SCG + D ++ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 161 MSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF 220
++H +VI N+M++G+ K G + + LF M R V SWN ++S +S + +L F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 221 HEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
M R + T + C LG + + + G + V ALVD +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFG-SQDDSDVAAALVDMFV 184
Query: 280 KCGILDTA--------------RN-----------------VFKEIPRKNVVSWNAMISG 308
+CG +D A RN +F +P ++VVSWN M+S
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
L+ +GR +++ M +KGV + T+ LT CA + ++L A + +P
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI---RNLP 301
Query: 369 NLEHY--GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HVELAE 422
++ Y +V++ + GC +EA + S+ R N A W L++ HG VEL
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA-WTVLIAGFLQHGCFTESVELFN 360
Query: 423 HAVKELINLEPW 434
EL+ L+ +
Sbjct: 361 QMRAELMTLDQF 372
>gi|255563078|ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 258/474 (54%), Gaps = 15/474 (3%)
Query: 13 NTRTHLTQIHAHFLRHK-LHQSNLILAHFVSV--CGTLNEIKYATKIFNQMRNPSVLLFN 69
NT H +IHAH ++ + +N+ + + CG L KYA ++F+++ ++ +N
Sbjct: 56 NTPFHGQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCL---KYARQMFDELPQRTLSAYN 112
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD-----LRVGQCVHG 124
+I Y G ++ + L L G PD +T++ +LKA GD +G VHG
Sbjct: 113 YLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTS-GDNVTLSCNLGSVVHG 171
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+I++S E + +V+ Y G++ KVFD M ++VI MI G+ +G V+
Sbjct: 172 QILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMMMEKNVICSTSMISGYMNRGSVED 231
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSE-ALRLFHEMRDQAFELDEATVVAVLPICA 243
+F E+ VV +N MI KS + +E AL ++ EM+ F + +T +V+ C+
Sbjct: 232 AEEIFERTVEKDVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACS 291
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L +IGQ + + V G+AL+D Y KCG ++ AR F+++P KNV SW+
Sbjct: 292 VLAGFEIGQQVQGQLLKREFFTNV-KTGSALIDMYSKCGRIEDARRAFEQMPEKNVFSWS 350
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
+MI G NGR + ++L+ +M + PN TF+G L+ C HAGLV K RE+F SM
Sbjct: 351 SMIDGYGKNGRPDEALQLFHKMQDCCIEPNYVTFLGALSACGHAGLVSKGREIFESMERE 410
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
+S+ P +EHY CMVD+LGR+G + A++ + M +P++ +W +LLS+C HG+VE+A
Sbjct: 411 YSLKPGMEHYACMVDLLGRAGSLNLAWEFVMGMPEKPSSDVWAALLSACNLHGNVEMASV 470
Query: 424 AVKELINLEP-WNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
A EL L SG YV LSN A G+WD +R M+ + K G S +
Sbjct: 471 AANELFKLNAEGRSGAYVALSNTLAAAGKWDGVTEVREIMKSRGILKDTGSSWV 524
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 258/470 (54%), Gaps = 4/470 (0%)
Query: 11 GRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
GR ++HA ++ L+ + + G +K A K+F+ + + + +
Sbjct: 20 GRKNPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWAT 79
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV--GQCVHGEIIR 128
++ A +L+ + + + + G+ PD + F+ L+KAC +G + V G+ +H +
Sbjct: 80 VLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLL 139
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
S F ++ +V++Y D G VFD + I MI G+ + G + L L
Sbjct: 140 SPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALEL 199
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA-VLPICARLGA 247
FRE +++ +W +IS L +SG ++AL LF EMR + + + V++ V+ CA
Sbjct: 200 FRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAV 259
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
++G+ +H + G Y + + NALVD Y KC + A+ +F E+ RK+VVSW ++I
Sbjct: 260 RELGKQVHCVVITLG-YESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIV 318
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A +G E + LY+ M+ GV PN+ TFVG++ C+H GLV K R LF SM I
Sbjct: 319 GTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR 378
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P+L+HY C++D+ RSG + EA +LIR+M ++P+ W +LLS+C+ HG+ ++A
Sbjct: 379 PSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADH 438
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L++L+P + +Y+LLSNIYA G W++ +R M VKK PG S ++
Sbjct: 439 LLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVD 488
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 256/482 (53%), Gaps = 38/482 (7%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFN 58
+ ++L LL ++ HL +IHA L L + + V + N + +F+
Sbjct: 30 KHQLLSLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFH 89
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
+ + + +N +I+ YS + +E + LF ++ G+ P+ TF LLKAC + L+
Sbjct: 90 CHFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKACATLATLQE 149
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H I+ G + +R ++ Y SC +M KV
Sbjct: 150 GKQFHAIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKV--------------------- 188
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
F EM ER++VSWN +I++ ++ EA+ F +M + FE DE T+V +
Sbjct: 189 ----------FDEMTERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVI 238
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA LG + +G+W+HS G+ V +G A VD Y K G + AR+VF + +K+
Sbjct: 239 LSACAELGNLSLGRWVHSQVVGRGMVLNV-QLGTAFVDMYAKSGDVGCARHVFNCLKQKS 297
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V +W+AMI GLA +G +EL+ M + + PN TF+GVL C+HAGLV+K+ F
Sbjct: 298 VWTWSAMILGLAQHGFANEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFN 357
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR---TH 415
M ++ I P + HYG MVDVLGR+G V+EAY+LI SM + P+ +W +LLS+C +
Sbjct: 358 LMERVYGIKPMMIHYGSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVN 417
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
G E+AE A K L+ LEP GN V+++N +AE G W A R M++ +KK G+S
Sbjct: 418 GGAEVAEEARKRLLELEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESC 477
Query: 476 IE 477
IE
Sbjct: 478 IE 479
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 234/434 (53%), Gaps = 32/434 (7%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG L+ K + ++ + +V+ +NSM KAYS+ G + + L+ L+ PD TF
Sbjct: 807 CGDLDSAKLVFEAIDRG-DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 865
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L +C L G+ +H I G +
Sbjct: 866 INLAASCQNPETLTQGRLIHSHAIHLG-------------------------------TD 894
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+D+ N I + K D LF M R+ VSW +MIS + G EAL LFH M
Sbjct: 895 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 954
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ D T+++++ C + G+++ G+WI + A+ G R V + NAL+D Y KCG
Sbjct: 955 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 1014
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ AR++F P K VV+W MI+G A NG ++L+ +MI PN TF+ VL
Sbjct: 1015 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQA 1074
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CAH+G +EK E F M +++I P L+HY CMVD+LGR G + EA +LIR+MS +P+A
Sbjct: 1075 CAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAG 1134
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IWG+LL++C+ H +V++AE A + L NLEP + YV ++NIYA G WD +R M+
Sbjct: 1135 IWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMK 1194
Query: 464 ENNVKKSPGQSLIE 477
+ N+KK PG+S+I+
Sbjct: 1195 QRNIKKYPGESVIQ 1208
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 64 SVLLFNSMIK-AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
SV +N I+ A + N P E + LF +K G P+ +TF + KAC + D+ + V
Sbjct: 622 SVNAWNLQIREAVNRNDPVES-LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 680
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H +I+S F + V+++ C +D KVF+ M RD N M+ GFC+ G
Sbjct: 681 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 740
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
DK LFREMR + ++ + +L +S ++L+L M +
Sbjct: 741 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMH---------------AVG 785
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVV 300
RLG VD+ V+V N + Y KCG LD+A+ VF+ I R + VV
Sbjct: 786 IRLG-VDVQ----------------VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVV 828
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
SWN+M + G LY M+ + P+ +TF+ + C + + + R
Sbjct: 829 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 882
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 165/390 (42%), Gaps = 31/390 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + V + N + YA K+F +M +N+M+ + +G
Sbjct: 680 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 739
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+++ LF ++ I PD T L+++ L++ + +H IR G + ++
Sbjct: 740 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 799
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y CG +D VF+ +D+G +R+VVSW
Sbjct: 800 WISTYGKCGDLDSAKLVFEA---------------------IDRG--------DRTVVSW 830
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N M + G +A L+ M + F+ D +T + + C + G+ IHS+A
Sbjct: 831 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 890
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G + + ++ N + Y K +AR +F + + VSW MISG A G + +
Sbjct: 891 LGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 949
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ MI G P+ T + +++ C G +E + + A N+ ++D+
Sbjct: 950 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 1009
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+ G + EA D+ + + W ++++
Sbjct: 1010 SKCGSIHEARDIFDNTPEK-TVVTWTTMIA 1038
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
SV +WNL I E+L LF EM+ FE + T V CARL V + +H
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
++ S + V VG A VD + KC +D A VF+ +P ++ +WNAM+SG +G
Sbjct: 682 AHLIKSPFWSDVF-VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 740
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+ L+ +M ++P+ T + ++ + EK+ +L +M
Sbjct: 741 DKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAM 781
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 130/334 (38%), Gaps = 70/334 (20%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
T T IH+H + Q + F+S+ + A +F+ M + + + + MI
Sbjct: 877 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 936
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
Y+ G +E + LF + G PD T L+ C G L G+ + G +R
Sbjct: 937 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR 996
Query: 134 FGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ I ++++Y+ CG + + +FD + V+ MI G+ G++L
Sbjct: 997 -DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL-----NGIFL--- 1047
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
EAL+LF +M D ++ + T +AVL CA G+++ G
Sbjct: 1048 -----------------------EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 1084
Query: 252 -QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
++ H + ++V ++ L + C M+ L
Sbjct: 1085 WEYFH-------IMKQVYNISPGLDHYSC-------------------------MVDLLG 1112
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
G+ E +EL M AK P+ + +L C
Sbjct: 1113 RKGKLEEALELIRNMSAK---PDAGIWGALLNAC 1143
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 264/483 (54%), Gaps = 13/483 (2%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVS-VCGTLNEIKYATKIFNQMRNP 63
L LLH + T L Q+H ++ L + + + V+ + G ++ YA ++ P
Sbjct: 39 LTLLHTQCATMARLRQLHGALVKSGLAKDPIAASRVVAFLAGKGRDVAYAARLVRHHPRP 98
Query: 64 SVLLFNSMIKAYSLNGPSEEP-VKLFALLKNLGIWPDEYTFAPLLK--ACLGV--GDLRV 118
+ ++N+ I+A S +GP + V LF + P+ TF L A LGV D
Sbjct: 99 NAFMWNTAIRALS-DGPGPDAAVALFLDMLRSPTPPERRTFPSLFASYARLGVRADDDGA 157
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFC 177
G +HG +++ G +R ++ +Y S G+ D+ + ++ + DV+ N I
Sbjct: 158 GAALHGMVLKLGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVVACNSAIVALT 217
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
+ G VD+ +F M R+V +W+ M+S+ ++ R +A+ LF M+ E + +V+
Sbjct: 218 RAGRVDEAREVFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQASGVEPNANVLVS 277
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
VL CA LGA++ G W+H+Y + G+ + V ALVD YCKCG + AR+VF +
Sbjct: 278 VLGCCAALGALEQGAWVHAYIDKHGVAMNALVV-TALVDMYCKCGSIHKARHVFDASRSQ 336
Query: 298 NVV---SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+ SWNAM+ GLA +G+ + + L+ ++ G+SP+ TF+ +L H+G+ ++A+
Sbjct: 337 GLAKLSSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYGHSGMADEAK 396
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
LF++M +++ P +EHYGC+VD L R+G + EA D+IR+M +RP+ AIWG+LLS CR
Sbjct: 397 ALFSAMEREYAVTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMRPDTAIWGALLSGCRL 456
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG E A + +P +SG YVL +++ A G ++R MR V K PG S
Sbjct: 457 HGDAEAGARAASGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERMRVEGVAKVPGCS 516
Query: 475 LIE 477
+IE
Sbjct: 517 MIE 519
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 250/433 (57%), Gaps = 8/433 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ +++ A + F++M SV+ +N+M AY+ +E + LF + GI PD+ T+
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRD 165
+ +C +GD + + I + ++ +++++ G ++ +FDE+ S R+
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRN 324
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+ N+MI + + G + LF M +R VVSWN MI+ ++G + ++ LF EM
Sbjct: 325 AVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS 384
Query: 226 -QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ DE T+ +VL C +GA+ + W+ + + +S N+L+ Y KCG +
Sbjct: 385 CMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI-KLGISGFNSLIFMYSKCGSV 443
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F+ + ++VVS+N +ISG A NG G+ ++L M +G+ P+ T++GVLT C
Sbjct: 444 ADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTAC 503
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAGL+ + + +F S+ P ++HY CMVD+LGR+G + EA LI+SM ++P+A +
Sbjct: 504 SHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGV 558
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
+GSLL++ R H V L E A +L LEP N GNYVLLSNIYA GRW+D + +R M++
Sbjct: 559 YGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKK 618
Query: 465 NNVKKSPGQSLIE 477
+KKS G S +E
Sbjct: 619 GGLKKSVGMSWVE 631
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 211/481 (43%), Gaps = 76/481 (15%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMIKAY 75
L Q H H + + LH N ++ + C L+ Y IF +P +++ M+K Y
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G + V LF +L + P + + L+K G++ H +++ G
Sbjct: 76 SRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNM-----FHAYVLKLGHIDDH 130
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR------------------------------- 164
IR ++++Y GQ+D +F++M+ R
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
++I M+ G+ K GD++ F EM ERSVVSWN M S+ + EAL LFH+M
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
++ D+ T V + C+ +G + I + + V AL+D + K G L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSF-VKTALLDMHAKFGNL 309
Query: 285 DTARNVFKEI--------------------------------PRKNVVSWNAMISGLAFN 312
+ ARN+F E+ P+++VVSWN+MI+G A N
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 313 GRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G + +EL+++MI+ + P++ T VL+ C H G + K + +I +
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL-KLSYWVLDIVREKNIKLGIS 428
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+ ++ + + G V +A+ + ++M R + + +L+S +GH + A+K ++ +
Sbjct: 429 GFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGH---GKEAIKLVLTM 484
Query: 432 E 432
E
Sbjct: 485 E 485
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 45/263 (17%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
+S + ++ A ++F+ M V+ +NSMI Y+ NG S ++LF ++ + I P
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQP 390
Query: 99 DEYTFAPLLKACLGVGDLRVG----QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
DE T A +L AC +G L++ V + I+ G F S+ + +Y+ CG + D
Sbjct: 391 DEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSL----IFMYSKCGSVADA 446
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
++F M RDV+ N +I GF +G
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGF-------------------------------AANGHGK 475
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EA++L M ++ E D T + VL C+ G ++ G+ + ++ V +
Sbjct: 476 EAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACM 530
Query: 275 VDFYCKCGILDTARNVFKEIPRK 297
VD + G LD A+ + + +P K
Sbjct: 531 VDLLGRAGELDEAKMLIQSMPMK 553
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 244/429 (56%), Gaps = 7/429 (1%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
+ A ++F ++ + V+ + +MI Y L E + ++ + G+ +E L+ A
Sbjct: 483 VDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSA 542
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + + G +HG +++ GF+ + I+ ++ Y +CG MD F+ + +
Sbjct: 543 CGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESW 602
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N ++ GF K VD+ +F +M ER V SW+ MIS ++ + AL LFH+M +
Sbjct: 603 NALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIK 662
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYA--ESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+E T+V+V A LG + G+W H Y ES L + + AL+D Y KCG +++A
Sbjct: 663 PNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA---ALIDMYAKCGSINSA 719
Query: 288 RNVFKEIPRK--NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
F +I K +V WNA+I GLA +G + ++++ M + PN TF+GVL+ C
Sbjct: 720 LQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACC 779
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
HAGLVE R +F M +++ P+++HYGCMVD+LGR+G + EA ++IRSM ++ + IW
Sbjct: 780 HAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIW 839
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
G+LL++CRTHG V + E A + L L P + G VLLSNIYA+ GRW+D +R ++
Sbjct: 840 GTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQ 899
Query: 466 NVKKSPGQS 474
+++ PG S
Sbjct: 900 RMERMPGCS 908
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 192/433 (44%), Gaps = 46/433 (10%)
Query: 41 VSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
+ VCG ++ A K+F+ M + + + +MI N E +++F +++ G+ P
Sbjct: 340 IMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVP 399
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
++ T ++ AC G++ + +H I+ E + ++ Y C + + ++F
Sbjct: 400 NDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLF 459
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D M +++ N+M++G+ K G VD LF + ++ V+SW MI R EAL
Sbjct: 460 DRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALV 519
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
++ M L+E VV ++ C RL A+ G +H G + + ++ FY
Sbjct: 520 MYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKG-FDCYNFIQTTIIHFY 578
Query: 279 CKCGIL-------------------------------DTARNVFKEIPRKNVVSWNAMIS 307
CG++ D AR +F ++P ++V SW+ MIS
Sbjct: 579 AACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMIS 638
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A + + +EL+ +M+A G+ PN+ T V V + A G +++ R + SI
Sbjct: 639 GYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICN-ESIP 697
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLI-----RSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
N ++D+ + G + A ++ S+ P W +++ +HGH +
Sbjct: 698 LNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSP----WNAIICGLASHGHASMCL 753
Query: 423 HAVKEL--INLEP 433
++ N++P
Sbjct: 754 DVFSDMQRYNIKP 766
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ +H +++ G I+ ++ +Y G + D +FD + I N+M+ G+ K
Sbjct: 288 GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G +D LF M ++ VS+ MI L ++ EAL +F +MR ++ T+V V
Sbjct: 348 AGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNV 407
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+ C+ G + + IH+ A +V V L+ YC C + AR +F +P N
Sbjct: 408 IYACSHFGEILNCRMIHAIAIKL-FVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVN 466
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+VSWN M++G A G ++ EL+E++ K V
Sbjct: 467 LVSWNVMLNGYAKAGLVDMARELFERVPDKDV 498
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N +V Y K G LD AR +F +P K VS+ MI GL N +E+++ M + GV
Sbjct: 339 NIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVV 398
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFA-----SMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
PN T V V+ C+H G + R + A + GL + NL C+ +G +
Sbjct: 399 PNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEA--- 455
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE--PWNS--GNYVLL 442
R +D + + N W +L+ G V++A + + + + W + Y+L+
Sbjct: 456 RRLFDRMPEV----NLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILM 511
Query: 443 SNIY 446
+ ++
Sbjct: 512 NRLH 515
>gi|30017569|gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 676
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/478 (34%), Positives = 259/478 (54%), Gaps = 15/478 (3%)
Query: 2 ERKILRLLHGRNT--RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
E+ L LL + R+ Q+HAH + LH + + + +++ A +F
Sbjct: 129 EQTFLSLLKSVDAERRSVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRC 188
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ N M+ Y G S + ++ F + + GI D+YT LL C + +G
Sbjct: 189 APTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIGVDQYTAVALLACCGRLKKAVLG 248
Query: 120 QCVHGEIIRSGFERFGSIRIGVV------ELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+ VHG ++R R G G++ ++Y CG+M+ M+VFDE RD I N M+
Sbjct: 249 RSVHGVVVR----RIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMV 304
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
GF G +D F E R ++SWN +++ + S + LFH+M + D+
Sbjct: 305 AGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVIPDKV 364
Query: 234 TVVAVLPICARLGAVDIGQWIHSYA-ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T V ++ A G ++ + +H + + G ++ +ALVD YCKCG + A VF+
Sbjct: 365 TAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLA--SALVDMYCKCGSIKLAYAVFE 422
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ K+V W AMISGLAF+G G++ ++L+ +M A+G PN T V VL+ C+HAGL ++
Sbjct: 423 KAVDKDVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDE 482
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
++F ++ +I P +EH+GCMVD+L RSG + +A DL R M ++P+ +IWGS+LS+
Sbjct: 483 GCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLARRMPMKPSRSIWGSILSAS 542
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+ E+AE A KEL+ LEP G YVLLSN+YA G+W+ + +R M V+KS
Sbjct: 543 SACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWNYSNEVRENMERKGVRKS 600
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 182/443 (41%), Gaps = 77/443 (17%)
Query: 21 IHAHFLRHKLHQSNLILA---HFVSVCGTLNEIKYATKIFNQMR-NPSVLLFNSMIKAYS 76
I AH LR +L ++ HF +V + + A +F P++ ++N M+ + +
Sbjct: 41 ILAHMLRLRLAFETFPMSRLLHFATVSFP-HHARAAETLFEHFTPRPNLYIYNLMLSSAA 99
Query: 77 LNGPSEEPVK------LFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+ L+ + I PDE TF LLK+ + VG+ VH ++ +G
Sbjct: 100 AAAAAASSSPSRRPAALYMSMLASSIHPDEQTFLSLLKS-VDAERRSVGKQVHAHVVVTG 158
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+R ++++Y G ++ +F D + N+M+ G+ K G K L FR
Sbjct: 159 LHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFR 218
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
M R + +D+ T VA+L C RL +
Sbjct: 219 GMASRGI-------------------------------GVDQYTAVALLACCGRLKKAVL 247
Query: 251 GQWIHS-YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ +H G+ + + + NAL+D Y KCG ++TA VF E ++ +SWN M++G
Sbjct: 248 GRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGF 307
Query: 310 AFNGRGELGVE-------------------------------LYEQMIAKGVSPNKATFV 338
A G +L + L+ M+A V P+K T V
Sbjct: 308 ANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVIPDKVTAV 367
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
+++ A G + AR + + H + +VD+ + G ++ AY + ++
Sbjct: 368 TLISAVAGKGTLNSARSVHGWVVKEHGTQDSFL-ASALVDMYCKCGSIKLAYAVFEK-AV 425
Query: 399 RPNAAIWGSLLSSCRTHGHVELA 421
+ +W +++S HGH ++A
Sbjct: 426 DKDVTLWTAMISGLAFHGHGDVA 448
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 244/462 (52%), Gaps = 5/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H +R L+ + + G + A +F M V+ + SM Y G
Sbjct: 99 RVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCG 158
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E + F + G P+ T + +L AC + DL+ G+ VHG ++R+G +
Sbjct: 159 LLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSS 218
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV-- 197
+V +Y SC + VFD MS RD + N++I + + +KGL +F M V
Sbjct: 219 ALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGL 278
Query: 198 --VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
SWN +I ++GR +AL + M++ F+ ++ T+ +VLP C L ++ G+ IH
Sbjct: 279 NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIH 338
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y ++ + + ALV Y KCG L+ +R VF + +++ VSWN MI + +G G
Sbjct: 339 GYIFRHWFFQDLTTT-TALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E + L+ +M+ GV PN TF GVL+ C+H+ LV++ +F SM+ HS+ P+ +H+ C
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVDVL R+G + EAY+ I+ M I P A WG+LL CR + +VEL A L +E N
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDN 517
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GNYVLLSNI W +A R MR+ V K+PG S I+
Sbjct: 518 PGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQ 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 145/322 (45%), Gaps = 33/322 (10%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWP 98
F+ V +++ A +F+++ P + + +I A + +G S E ++ + ++ + P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D+ + KAC + D+ + VH + IR GF + ++++Y C + VF
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
+ M RDVI SW M S G EAL
Sbjct: 137 EGMPFRDVI-------------------------------SWTSMASCYVNCGLLREALG 165
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M + TV ++LP C L + G+ +H + +G+ V V +ALV+ Y
Sbjct: 166 AFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVF-VSSALVNMY 224
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
C + A+ VF + R++ VSWN +I+ N E G+ ++ +M+++GV N A++
Sbjct: 225 ASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWN 284
Query: 339 GVLTCCAHAGLVEKARELFASM 360
V+ C G EKA E+ + M
Sbjct: 285 AVIGGCMQNGRTEKALEVLSRM 306
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 8/243 (3%)
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ-AFEL 230
I + GD+ + +LF ++ + + +W ++IS+L K GR EA++ +++ R + E
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
D+ +++V CA L V + +H A G V+ +GNAL+D Y KC + AR V
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVL-LGNALIDMYGKCRCSEGARLV 135
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F+ +P ++V+SW +M S G + + +M G PN T +L C +
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195
Query: 351 EKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
+ RE+ F G+ N+ +V++ +R+A + SMS R + W L
Sbjct: 196 KSGREVHGFVVRNGMGG---NVFVSSALVNMYASCLSIRQAQLVFDSMS-RRDTVSWNVL 251
Query: 409 LSS 411
+++
Sbjct: 252 ITA 254
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 244/462 (52%), Gaps = 40/462 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFV----SVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+H ++ L SN+ +A+ + CG L E A+ +F++M + +N++I A
Sbjct: 380 QLHGLAIKSNL-SSNICVANAILDMYGKCGALVE---ASGLFDEMEIRDPVSWNAIITAC 435
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
N + + F + + PDE+T+ +LKAC G G VHG II+SG
Sbjct: 436 EQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKM 495
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y+ CG M++ K+ +R + E+
Sbjct: 496 FVGSALVDMYSKCGMMEEAEKIH------------------------------YR-LEEQ 524
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
++VSWN +IS + ++ R F M + E D T VL CA L V +G+ IH
Sbjct: 525 TMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIH 584
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ L V + + LVD Y KCG + + +F++ P+++ V+WNAMI G A++G G
Sbjct: 585 AQMIKLELLSDVY-ITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLG 643
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E +EL+E M+ + + PN ATFV VL C+H G +K F M ++++ P LEHY C
Sbjct: 644 EEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSC 703
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGRSG V EA LI+ M +A IW +LLS C+ G+VE+AE A L+ L+P +
Sbjct: 704 MVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPED 763
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
S Y LLSNIYA+ G W +R MR +N+KK PG S IE
Sbjct: 764 SSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIE 805
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 190/426 (44%), Gaps = 41/426 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ+H H L+ ++ + + + + A K+F+ + + ++ +N+MI Y+ N
Sbjct: 278 TQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARN 337
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ KLF L+ DE + + L A + G +HG I+S +
Sbjct: 338 EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVA 397
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y CG + + +FDEM RD V
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRD-------------------------------PV 426
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
SWN +I++ ++ + + L F M E DE T +VL CA A G +H
Sbjct: 427 SWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRI 486
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
SG+ K+ VG+ALVD Y KCG+++ A + + + +VSWNA+ISG + + E
Sbjct: 487 IKSGMGLKMF-VGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDS 545
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+ M+ GV P+ T+ VL CA+ V +++ A M L ++ ++ +VD
Sbjct: 546 QRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLE-LLSDVYITSTLVD 604
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG----HVELAEHAVKELINLEPW 434
+ + G + ++ + R R ++ W +++ HG +EL EH + E N++P
Sbjct: 605 MYSKCGNMHDSLLMFRKAPKR-DSVTWNAMICGFAYHGLGEEALELFEHMLHE--NIKP- 660
Query: 435 NSGNYV 440
N +V
Sbjct: 661 NHATFV 666
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
TF+ + + C L+ G+ H +I SGF + ++++Y C ++ KVF+EM
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER-SVVSWNLMISSLGKSGRDSEALRLF 220
RD++ N M+ G G ++ +F M VVSWN +IS ++G +++ +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+MRD D T+ L IC+ L +G IH A G VV+ G+ALVD Y K
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVT-GSALVDMYAK 204
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
C L+ + +VF E+P KN +SW+A I+G N + G++L+++M KG+ +++T+ V
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264
Query: 341 LTCCA 345
CA
Sbjct: 265 FRSCA 269
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 172/375 (45%), Gaps = 43/375 (11%)
Query: 44 CGTLNEIKYATKIFNQM-RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYT 102
C ++ A +FN M + V+ +NS+I Y NG ++ + +F +++LG+ D T
Sbjct: 100 CAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTT 159
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
A LK C + D +G +HG ++ GF+ +V++Y C ++D + VF E+
Sbjct: 160 LAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELP 219
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
++ I + I G + + +GL LF+EM+ + +
Sbjct: 220 DKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGI------------------------- 254
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
+ ++T +V CA L A +G +H +A + V+ VG A +D Y KC
Sbjct: 255 ------GVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVI-VGTATLDMYAKCD 307
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A +F +P N+ S+NAMI G A N +G +L+ Q+ S ++ + G L+
Sbjct: 308 NMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALS 367
Query: 343 CCAHAGLVEKARELFASMTGLHSIVPNLEHYGC----MVDVLGRSGCVREAYDLIRSMSI 398
A V K + GL +I NL C ++D+ G+ G + EA L M I
Sbjct: 368 ----AAAVIKGHSEGLQLHGL-AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEI 422
Query: 399 RPNAAIWGSLLSSCR 413
R + W +++++C
Sbjct: 423 R-DPVSWNAIITACE 436
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 49/291 (16%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMR 61
+L+ G+ ++ ++H ++ + + L S CG + E A KI ++
Sbjct: 466 VLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEE---AEKIHYRLE 522
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+++ +N++I +SL SE+ + F+ + +G+ PD +T+A +L C + + +G+
Sbjct: 523 EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQ 582
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGF----- 176
+H ++I+ I +V++Y+ CG M D + +F + RD + N MI GF
Sbjct: 583 IHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGL 642
Query: 177 -----------------------------CKK-GDVDKGLYLFREMR-----ERSVVSWN 201
C G+ KGL+ F++M E + ++
Sbjct: 643 GEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYS 702
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
M+ LG+SG+ EALRL ++D FE D +L IC G V++ +
Sbjct: 703 CMVDILGRSGQVEEALRL---IQDMPFEADAIIWRTLLSICKIQGNVEVAE 750
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T + C+ A+ G+ H++ SG + V V N L+ Y KC L+ A VF+E
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSG-FTPTVFVTNCLIQMYVKCCALEYAYKVFEE 84
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+P++++VSWN M+ G A GR EL ++ M G + ++ +++ G ++K+
Sbjct: 85 MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKS 141
Query: 354 RELFASMTGL 363
+F M L
Sbjct: 142 IAVFLKMRDL 151
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/453 (35%), Positives = 245/453 (54%), Gaps = 37/453 (8%)
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M +V+ + S+I YS NG ++ + + G+ PD++TF ++KAC +GD+ +G
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 60
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H +++S F + ++ +YT + D + VF M+ RD+I MI GF +
Sbjct: 61 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 120
Query: 180 GDVDKGLYLFREMRER---SVVSWNLMISSLGKSGRDSEALRLFHEMR------------ 224
G + L F+EM + +V+WN +I+ G +A+ F EMR
Sbjct: 121 GYELEALCYFKEMLHQGRPDLVAWNAIIAGFAY-GELRDAIFFFEEMRCNADLVSWNAIL 179
Query: 225 ------DQAFEL--------------DEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
DQA E+ D T+ VL A +++IG +H YA +GL
Sbjct: 180 TACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 239
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
SV N L+D Y KCG L TA +F + +VVSW+++I G A G GE ++L++
Sbjct: 240 CD-TSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKT 298
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M V PN TFVGVLT C+H GLVE+ +L+ +M I P EH CMVD+L R+G
Sbjct: 299 MRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAG 358
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
C+ EA I M+ P+ +W +LL++C+THG+V++ + A + ++ ++P NS +VLL N
Sbjct: 359 CLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCN 418
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA G W+D LR M++ V+K PGQS IE
Sbjct: 419 IYASKGNWEDVARLRSLMKQRGVRKVPGQSWIE 451
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 2/168 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H + L+ L+ + + + +K A KIF+ M NP V+ ++S+I Y+ G
Sbjct: 228 QVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFG 287
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS-GFERFGSIR 138
EE +KLF ++ L + P+ TF +L AC VG + G ++G + + G
Sbjct: 288 YGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHC 347
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKG 185
+V+L G +++ +M+ D++V ++ G+VD G
Sbjct: 348 SCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVG 395
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 149/433 (34%), Positives = 250/433 (57%), Gaps = 8/433 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ +++ A + F++M SV+ +N+M AY+ +E + LF + GI PD+ T+
Sbjct: 205 MGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVT 264
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRD 165
+ +C +GD + + I + ++ +++++ G ++ +FDE+ S R+
Sbjct: 265 ISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRN 324
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+ N+MI + + G + LF M +R VVSWN MI+ ++G + ++ LF EM
Sbjct: 325 AVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMIS 384
Query: 226 -QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ DE T+ +VL C +GA+ + W+ + + +S N+L+ Y KCG +
Sbjct: 385 CMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI-KLGISGFNSLIFMYSKCGSV 443
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
A +F+ + ++VVS+N +ISG A NG G+ ++L M +G+ P+ T++GVLT C
Sbjct: 444 ADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTAC 503
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
+HAGL+ + + +F S+ P ++HY CMVD+LGR+G + EA LI+SM ++P+A +
Sbjct: 504 SHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGV 558
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
+GSLL++ R H V L E A +L LEP N GNYVLLSNIYA GRW+D + +R M++
Sbjct: 559 YGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKK 618
Query: 465 NNVKKSPGQSLIE 477
+KKS G S +E
Sbjct: 619 GGLKKSVGMSWVE 631
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 211/481 (43%), Gaps = 76/481 (15%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSMIKAY 75
L Q H H + + LH N ++ + C L+ Y IF +P +++ M+K Y
Sbjct: 16 QLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G + V LF +L + P + + L+K G+L H +++ G
Sbjct: 76 SRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNL-----FHAYVLKLGHIDDH 130
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHR------------------------------- 164
IR ++++Y GQ+D +F++M+ R
Sbjct: 131 FIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPAR 190
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
++I M+ G+ K GD++ F EM ERSVVSWN M S+ + EAL LFH+M
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
++ D+ T V + C+ +G + I + + V AL+D + K G L
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSF-VKTALLDMHAKFGNL 309
Query: 285 DTARNVFKEI--------------------------------PRKNVVSWNAMISGLAFN 312
+ ARN+F E+ P+++VVSWN+MI+G A N
Sbjct: 310 EIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQN 369
Query: 313 GRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
G + +EL+++MI+ + P++ T VL+ C H G + K + +I +
Sbjct: 370 GESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL-KLSYWVLDIVREKNIKLGIS 428
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
+ ++ + + G V +A+ + ++M R + + +L+S +GH + A+K ++ +
Sbjct: 429 GFNSLIFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGH---GKEAIKLVLTM 484
Query: 432 E 432
E
Sbjct: 485 E 485
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 45/263 (17%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWP 98
+S + ++ A ++F+ M V+ +NSMI Y+ NG S ++LF ++ + I P
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQP 390
Query: 99 DEYTFAPLLKACLGVGDLRVG----QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
DE T A +L AC +G L++ V + I+ G F S+ + +Y+ CG + D
Sbjct: 391 DEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSL----IFMYSKCGSVADA 446
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
++F M RDV+ N +I GF +G
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGF-------------------------------AANGHGK 475
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EA++L M ++ E D T + VL C+ G ++ G+ + ++ V +
Sbjct: 476 EAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACM 530
Query: 275 VDFYCKCGILDTARNVFKEIPRK 297
VD + G LD A+ + + +P K
Sbjct: 531 VDLLGRAGELDEAKMLIQSMPMK 553
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 222/379 (58%), Gaps = 5/379 (1%)
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
D ++ +++ L VG+L + E+ + +I G Y G+M+ +F
Sbjct: 11 DVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDG----YVKAGEMNKAFGLF 66
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
+ M R+V+ + M+ G+CK GD++ LF M +++VSW +++S G +A+R
Sbjct: 67 ESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIR 126
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M + + D+ TV+++L CA G + +G+ +H+ E Y+ V+V NALVD Y
Sbjct: 127 SFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSIERI-RYKCSVNVSNALVDMY 185
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG +D A +VF + +K++VSWN M+ GLA +G GE ++L+ M +G P+K T V
Sbjct: 186 AKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLV 245
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
VL C HAG V++ F +M + IVP++EHYGCMVD+LGR G ++EAY L++SM +
Sbjct: 246 AVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPV 305
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
PN IWG+LL +CR H V LAE + L LEP + GNY LLSNI+A G W +
Sbjct: 306 EPNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANV 365
Query: 459 RMWMRENNVKKSPGQSLIE 477
R+ M+ ++K G S IE
Sbjct: 366 RLQMKNFGIQKPSGASSIE 384
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 44/268 (16%)
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
M++F M RDV+ N MI G K G++ + LF EM + VSWN ++ K+G +
Sbjct: 1 MRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMN 60
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
+A LF M + R VVS + +
Sbjct: 61 KAFGLFESMPE---------------------------------------RNVVS-WSTM 80
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
V YCK G ++ AR +F +P KN+VSW ++SG A G + + +EQM G+ P+
Sbjct: 81 VSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDD 140
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGL-HSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
T + +L CA +GL+ + + S+ + + N+ + +VD+ + G V A +
Sbjct: 141 GTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSN--ALVDMYAKCGQVDRALSVF 198
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELA 421
MS + + W +L HGH E A
Sbjct: 199 NGMS-KKDLVSWNCMLQGLAMHGHGEKA 225
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 34/260 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
+++ A +F++M +++ + ++ Y++ G +++ ++ F ++ G+ PD+ T +L
Sbjct: 89 DMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILA 148
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+C G L +G+ VH I R ++ ++ +V++Y CGQ+D + VF+ MS +D++
Sbjct: 149 SCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVS 208
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N M+ G G +K AL+LF MR + F
Sbjct: 209 WNCMLQGLAMHGHGEK-------------------------------ALQLFSIMRQEGF 237
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
D+ T+VAVL C G VD G ++ ++ G+ + G +VD + G L A
Sbjct: 238 RPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYG-CMVDLLGRGGRLKEA 296
Query: 288 RNVFKEIP-RKNVVSWNAMI 306
+ + +P NVV W ++
Sbjct: 297 YRLVQSMPVEPNVVIWGTLL 316
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
L G R H T I + ++ SN ++ + CG ++ A +FN M ++ +
Sbjct: 155 LLGLGKRVH-TSIERIRYKCSVNVSNALVDMYAK-CG---QVDRALSVFNGMSKKDLVSW 209
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
N M++ +++G E+ ++LF++++ G PD+ T +L AC+ G
Sbjct: 210 NCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAG 255
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+FK + ++VVSWN+MI GL G +L+++M K + ++ +L AG
Sbjct: 3 LFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMK----DAVSWNTILDGYVKAGE 58
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+ KA LF SM N+ + MV ++G + A L M ++ N W ++
Sbjct: 59 MNKAFGLFESMPE-----RNVVSWSTMVSGYCKAGDMEMARMLFDRMPVK-NLVSWTIIV 112
Query: 410 SSCRTHGHVELAEHAVKELINLE 432
S G LA+ A++ +E
Sbjct: 113 SGYAVKG---LAKDAIRSFEQME 132
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 237/425 (55%), Gaps = 7/425 (1%)
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGD 115
NQ + +++ + S I + + E K FA ++ G+ P TF LL C G
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G +HG + G +R + +G ++ +Y+ G++ VFD M ++ + N MI
Sbjct: 64 ETLGDLLHGYACKLGLDR-NHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMI 122
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G V + LF +M E ++SW M++ K G EAL F EM+ + D
Sbjct: 123 DGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYV 182
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ +G W+H Y S ++ V V N+L+D YC+CG ++ AR VF +
Sbjct: 183 AIIAALNACTNLGALSLGLWVHRYVMSQD-FKNNVRVSNSLIDLYCRCGCVEFAREVFDK 241
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M +G PN TF G LT C+H GLV++
Sbjct: 242 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEG 301
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F SM ++I P +EHYGC+VD+ R+G + +A +++SM ++PN + GSLL++CR
Sbjct: 302 LRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACR 361
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
HG + LAE +K L +L + NYV+LSN+YA +W+ A +R M+ +KK PG
Sbjct: 362 NHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPG 421
Query: 473 QSLIE 477
S IE
Sbjct: 422 FSSIE 426
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 33/250 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M P ++ + +M+ + G EE + F ++ G+ PD L
Sbjct: 130 QVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALN 189
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L +G VH ++ F+ + +++LY CG ++ +VFD+M R V+
Sbjct: 190 ACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVS 249
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E + F
Sbjct: 250 WNSVIVGFAANGNAHESLVYFRKMQE-------------------------------EGF 278
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ + T L C+ +G VD G ++ S + ++ G LVD Y + G L+ A
Sbjct: 279 KPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYG-CLVDLYSRAGRLEDA 337
Query: 288 RNVFKEIPRK 297
V + +P K
Sbjct: 338 LKVVQSMPMK 347
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 265/497 (53%), Gaps = 59/497 (11%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIFNQ 59
++I L + + L Q+HA LR + L + + + +++ YA ++F+
Sbjct: 106 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 165
Query: 60 MRNPSVLLFNSMIKAYSLN-GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ N S ++N++I+A + + EE L+ +L+ PD++TF +LKAC +
Sbjct: 166 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 225
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH +I++ GF + G++ LY SC
Sbjct: 226 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC----------------------------- 256
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
G +D +F EM ERS+VSWN MI +L + G AL+LF EM+ ++FE D T+ +
Sbjct: 257 --GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQS 313
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGILDTARNV 290
VL CA LG++ +G W H++ L RK V V N+L++ YCKCG L A V
Sbjct: 314 VLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 368
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVSPNKATFVGVLTCCAHAG 348
F+ + ++++ SWNAMI G A +GR E + +++M+ K V PN TFVG+L C H G
Sbjct: 369 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 428
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
V K R+ F M + I P LEHYGC+VD++ R+G + EA D++ SM ++P+A IW SL
Sbjct: 429 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 488
Query: 409 LSSCRTHG-HVELAEHAVKELINLEPWN-------SGNYVLLSNIYAEGGRWDDAETLRM 460
L +C G VEL+E + +I + N SG YVLLS +YA RW+D +R
Sbjct: 489 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 548
Query: 461 WMRENNVKKSPGQSLIE 477
M E+ ++K PG S IE
Sbjct: 549 LMSEHGIRKEPGCSSIE 565
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 236/417 (56%), Gaps = 22/417 (5%)
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGDLRVGQCV 122
++ + S I + NG E F+ ++ G+ P+ TF LL AC + LR G +
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 123 HGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H + + G + ++ +G +V++Y+ CGQ+D +FDEM R+ + N MI G + G
Sbjct: 114 HAYVRKLGLDT-ENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNG 172
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+V + + LF +M ER +SW MI K G +AL F EM+ E D T+++VL
Sbjct: 173 EVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLA 232
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA+ +G WI+ + ++ + + N+L+D Y +CG + AR VF+++P++++V
Sbjct: 233 ACANLGALGLGLWINRFVMKQD-FKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLV 291
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN+MI G A NG E +E + M +G H+GLV++ + F M
Sbjct: 292 SWNSMIVGFALNGHAEEALEFFNLMRKEG----------------HSGLVDEGLQFFDIM 335
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
I P +EHYGC+VD+ R+G + +A ++I +M ++PN + GSLL++CRTHG V L
Sbjct: 336 KRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGL 395
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE +K L ++P + NYVLLSNIYA GRWD A +R M+ + K PG S IE
Sbjct: 396 AERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIE 452
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 102/254 (40%), Gaps = 47/254 (18%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
C E+ A +F+QM + + SMI + G E+ ++ F ++ G+ PD T
Sbjct: 168 CMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTI 227
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC +G L +G ++ +++ F+ I ++++Y+ CG + +VF++M
Sbjct: 228 ISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPK 287
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R ++ N MI GF G ++ L F MR+ G SG E L+ F M
Sbjct: 288 RSLVSWNSMIVGFALNGHAEEALEFFNLMRKE------------GHSGLVDEGLQFFDIM 335
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ I I Y LVD Y + G
Sbjct: 336 KRTR---------------------KISPRIEHYG--------------CLVDLYSRAGR 360
Query: 284 LDTARNVFKEIPRK 297
L+ A NV +P K
Sbjct: 361 LEDALNVIANMPMK 374
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL--VEK 352
P +VSW + I+ NG+ + +M GV PN TF+ +L+ C L +
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ A + L N+ +VD+ + G + A+ + M +R N+ W +++ C
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR-NSVSWNTMIDGC 168
Query: 413 RTHGHV 418
+G V
Sbjct: 169 MRNGEV 174
>gi|357116134|ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Brachypodium distachyon]
Length = 601
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 257/475 (54%), Gaps = 3/475 (0%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E+ L LL + Q+HAH L + LH + + + + + A +F +
Sbjct: 120 EKTFLSLLKSVGCASVGKQVHAHVLVNGLHSRVYLRNSLIKMYLDAGDAETAEAMFQSVP 179
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
P V+ N M+ Y G ++LF + + I D+Y LL C + + +G+
Sbjct: 180 VPDVVSCNIMLSGYVKGGCVVNALQLFRDMASREIGVDQYAAVALLSCCGRLKNALLGRS 239
Query: 122 VHGEIIR--SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG ++R +R + ++++Y CG+M+ M+VF E +D I N MI GF
Sbjct: 240 VHGVVVRRMDIKDRGLILSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGFAND 299
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G +D F + R ++SWN +++ G+ + + LF++M D+ T V ++
Sbjct: 300 GMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVRPDKVTAVTLI 359
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
GA+++G+ +H + + + + LVD YCKCG + A VF++ K+V
Sbjct: 360 SAAVSKGALNLGKSVHGWVLKEHGTQDAF-LASTLVDMYCKCGNVKLAYAVFEKALDKDV 418
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
W AMISGLAF+G G ++L+ M +GV+PN T V VL+ C+HAGL+++ E+F +
Sbjct: 419 TLWTAMISGLAFHGHGTEALDLFWNMQNEGVAPNGVTLVTVLSACSHAGLLDEGCEIFYT 478
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M +I P +EH+GCMVD+L RSG + +A L R M ++P+ +IWGS+LS + + E
Sbjct: 479 MQKRFNIEPRVEHFGCMVDLLARSGRLSDAVGLARMMPMKPSRSIWGSILSVSSSCQNTE 538
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
+AE A KEL+ LEP G YVLLSN+YA GG+W+ + +R M V+KS G S
Sbjct: 539 VAEIASKELLRLEPTEEGGYVLLSNLYAAGGQWNYSNKVRENMEMRGVRKSAGAS 593
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 175/439 (39%), Gaps = 87/439 (19%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL--- 77
I AH LR +L ++ + +AT F Q ++LLF +L
Sbjct: 40 ILAHMLRVRLAFETFPMSRL---------LYFATVAFPQYTREALLLFEHFTTRPNLYCY 90
Query: 78 -------NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+ V L+ + PDE TF LLK+ VG VG+ VH ++ +G
Sbjct: 91 NLVLSALSSSQSRSVALYKSMLASSASPDEKTFLSLLKS---VGCASVGKQVHAHVLVNG 147
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+R ++++Y G + +F + DV+ N+M+ G+ K G V L LFR
Sbjct: 148 LHSRVYLRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGGCVVNALQLFR 207
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M R + +D+ VA+L C RL +
Sbjct: 208 DMASREI-------------------------------GVDQYAAVALLSCCGRLKNALL 236
Query: 251 GQWIHS-YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ +H + + + + NAL+D Y KCG ++TA VF E K+ +SWN MI+G
Sbjct: 237 GRSVHGVVVRRMDIKDRGLILSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGF 296
Query: 310 AFNGRGELG-------------------------------VELYEQMIAKGVSPNKATFV 338
A +G +L +EL+ M++ V P+K T V
Sbjct: 297 ANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVRPDKVTAV 356
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
+++ G + + + + H + +VD+ + G V+ AY + ++
Sbjct: 357 TLISAAVSKGALNLGKSVHGWVLKEHG-TQDAFLASTLVDMYCKCGNVKLAYAVFEK-AL 414
Query: 399 RPNAAIWGSLLSSCRTHGH 417
+ +W +++S HGH
Sbjct: 415 DKDVTLWTAMISGLAFHGH 433
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 236/430 (54%), Gaps = 4/430 (0%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G +N+ A + F + N V+++NS+I Y N E LF ++ G+ D T A
Sbjct: 252 GRMND---ARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLA 308
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC + + + G+ +H + G + ++ Y+ CG ++D K+F E+
Sbjct: 309 TILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTY 368
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D I+ N MI + G ++ +F M +S++SWN MI L ++G EAL LF M
Sbjct: 369 DTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMN 428
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
++ + +V+ CA + ++++G+ I + A GL V + +LVDFYCKCG +
Sbjct: 429 KLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEV-ISTSLVDFYCKCGFI 487
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+ R +F + + + +SWN+M+ G A NG G + L+ +M GV P + TF GVL+ C
Sbjct: 488 EIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSAC 547
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
H GLV++ F M + I P +EHY CMVD+ R+GC+ EA +LI+ M +A++
Sbjct: 548 DHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASM 607
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
W S+L C HG +L E +++I L+P NSG YV LS+I+A G W+ + +R M+E
Sbjct: 608 WSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQE 667
Query: 465 NNVKKSPGQS 474
V+K PG S
Sbjct: 668 RQVQKYPGYS 677
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 190/410 (46%), Gaps = 51/410 (12%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP------DEYT 102
E++ A ++FN+M N + +++NSMI +Y+ NG E V+LF K L + P D +
Sbjct: 118 EMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLF---KELNLDPLDKSCCDTFV 174
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
A ++ AC +G+++ G+ +H I+ E + ++ LY CG +D V + M
Sbjct: 175 LATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTME 234
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
D + +I G+ G ++ F VV WN +IS + + EA LF++
Sbjct: 235 EPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFND 294
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M+ + ++D +T+ +L C+ L G+ +H+YA GL V V +A +D Y KCG
Sbjct: 295 MQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNV-VASAFIDAYSKCG 353
Query: 283 IL-------------------------------DTARNVFKEIPRKNVVSWNAMISGLAF 311
L + A+ +F +P K+++SWN+MI GL+
Sbjct: 354 SLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQ 413
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS--IV 367
NG ++L+ M + N+ V++ CA +E ++FA T GL S ++
Sbjct: 414 NGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVI 473
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+VD + G + L +M ++ + W S+L T+GH
Sbjct: 474 ST-----SLVDFYCKCGFIEIGRKLFDTM-MKSDEISWNSMLMGYATNGH 517
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 145/367 (39%), Gaps = 78/367 (21%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF----------- 189
++++YT CG M D K+FDEM HR+ N MI G+ K G+ ++ + LF
Sbjct: 47 LLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSW 106
Query: 190 --------------------REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
EM R+ V WN MI S ++G EA+RLF E+ +
Sbjct: 107 NVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLD 166
Query: 230 ---LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
D + V+ C LG + G+ IH+ + V + ++L++ Y KCG LD+
Sbjct: 167 KSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSV-LTSSLINLYGKCGDLDS 225
Query: 287 -------------------------------ARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
AR F VV WN++ISG N
Sbjct: 226 AHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEE 285
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
L+ M KG+ + +T +L+ C+ + +++ A + I N+
Sbjct: 286 IEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVA-SA 344
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEP-- 433
+D + G + +A L + + + S+++ G +E A K++ N P
Sbjct: 345 FIDAYSKCGSLNDACKLFSELKTY-DTILLNSMITVYSNSGKIEDA----KQIFNTMPSK 399
Query: 434 ----WNS 436
WNS
Sbjct: 400 SLISWNS 406
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 142/347 (40%), Gaps = 73/347 (21%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFV---SVCGTLNE------------------------ 49
H Q+HA+ + L N++ + F+ S CG+LN+
Sbjct: 322 HGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYS 381
Query: 50 ----IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
I+ A +IFN M + S++ +NSMI S NG E + LF ++ L + + +
Sbjct: 382 NSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTS 441
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
++ AC + L +G+ + G + I +V+ Y CG ++ G K+FD M D
Sbjct: 442 VISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSD 501
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
I N M+ G+ G + L LF EMR V
Sbjct: 502 EISWNSMLMGYATNGHGLEALTLFNEMRHAGV---------------------------- 533
Query: 226 QAFELDEATVVAVLPICARLGAVDIG-QWI----HSYAESSGLYRKVVSVGNALVDFYCK 280
E T VL C G V G +W + Y G+ + +VD + +
Sbjct: 534 ---RPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHY-----SCMVDLFAR 585
Query: 281 CGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMI 326
G L+ A N+ K +P + S W++++ G +G +LG ++ +Q+I
Sbjct: 586 AGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQII 632
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 18/222 (8%)
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+ +H GL + +S+ N L+ Y +CG + A +F E+P +N SWN MI G
Sbjct: 24 GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYM 83
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G E + L++ M K F G A AG +E AR LF M + +V N
Sbjct: 84 KSGNKERSIRLFDMMSNKNDYSWNVVFSGF----AKAGEMEIARRLFNEMPNRNGVVWN- 138
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRP------NAAIWGSLLSSCRTHGHVELAE-- 422
M+ R+G REA L + +++ P + + +++ +C G ++ +
Sbjct: 139 ----SMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQI 194
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
HA + N+E +S L N+Y + G D A + M E
Sbjct: 195 HARILIDNME-LDSVLTSSLINLYGKCGDLDSAHCVLNTMEE 235
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 246/442 (55%), Gaps = 2/442 (0%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
++ VS+ G + A ++F+ + + +MI + N E + +F+ ++
Sbjct: 203 VSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERW 262
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
DE ++ AC ++ GQ HG +IR+G +++ ++ +Y+SC + +
Sbjct: 263 HVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARR 322
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD D N MI G+ K G V + LF M + VSW+ +IS ++ + S+A
Sbjct: 323 LFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDA 382
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L +F M+ Q DE T+V+V+ C L A++ G+ +H Y + + Y +V +G +L++
Sbjct: 383 LTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLV-LGTSLIN 441
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV-SPNKA 335
Y KCG L+ A F + K WNA+I GLA NG ++++ +M A +PN+
Sbjct: 442 MYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEI 501
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF GVL+ C HAGLV++ R F M + IVPN+ HYGCMVD+LGR+G V+EA D+I+S
Sbjct: 502 TFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQS 561
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+ WG+LL +C HG E+ E ++L+N +P + G +LSNIYA+ G W
Sbjct: 562 MPMSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSV 621
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+ LR M++ +V+K G S+++
Sbjct: 622 DDLRGSMKQRHVQKVSGHSVVK 643
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 211/512 (41%), Gaps = 108/512 (21%)
Query: 17 HLTQIHAHF-----LRHKLHQSNLILAHFVSVCGTLN-EIKYATKIFNQMRNPSVLLFNS 70
HL QIHA F L S L+L F S L ++ ++ +R P+ N+
Sbjct: 19 HLLQIHAQFIASGLLADAFAASRLLL--FTSASRLLPLPFHHSLRLLRLVRYPNAFSCNT 76
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
++K+ + G + L+A +L PD YT L AC D+ G+ VH + G
Sbjct: 77 LLKSALIGGMPHLCLPLYA---SLPAPPDSYTHPILAAACASRKDVIEGRQVHAHAVSHG 133
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F +R ++ +Y++CG + D +VFD D + N ++ + GDVD+ + +F
Sbjct: 134 FGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVEVFA 193
Query: 191 EMRERS-------------------------------VVSWNLMISSLGKSGRDSEALRL 219
+M +R+ + +W MIS ++ +EAL +
Sbjct: 194 QMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHV 253
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F MR + + +DE +V+V+ CA+ + GQ H +GL + V+V NAL+ Y
Sbjct: 254 FSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQ-VNVQNALIHMYS 312
Query: 280 KC-------------------------------GILDTARNVFKEIPRKNVVSWNAMISG 308
C G + A +F +P K+ VSW+ +ISG
Sbjct: 313 SCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISG 372
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR---------ELFAS 359
N + + +++ M A+G+ P++ T V V++ C + +EK + + + S
Sbjct: 373 CVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVS 432
Query: 360 MTGLHSIVPNLEHYGCM---------------------VDVLGRSGCVREAYDLIRSM-- 396
+ S++ GC+ + L +G V ++ D+ M
Sbjct: 433 LVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEA 492
Query: 397 --SIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
+ PN + +LS+CR G V+ H K
Sbjct: 493 SDTATPNEITFTGVLSACRHAGLVDEGRHFFK 524
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 255/440 (57%), Gaps = 2/440 (0%)
Query: 39 HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
H ++ L ++ A K+F++M V+ +N+++ AY+ G E + L+ + L +
Sbjct: 134 HMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGF 193
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ ++FA +L C+ + +L++ + VHG+++ +GF + +V+ Y+ CG+M +F
Sbjct: 194 NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLF 253
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
DEM +D+ ++ G+ K GD++ LF +M E++ VSW+ +IS ++ EAL
Sbjct: 254 DEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALD 313
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M ++ T + L CA + A+ G+ +H Y + +R V ++L+D Y
Sbjct: 314 YFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRT-YFRCNTIVVSSLIDMY 372
Query: 279 CKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
KCG+L+ + VF + K +VV WN MIS LA NG GE ++++ M+ G+ P++ TF
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITF 432
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ +L+ C+H+GLV++ F +MT H + P+ EHY C++D+LGR+GC E + + +MS
Sbjct: 433 IVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMS 492
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+P+ +W +LL CR H ++EL + +I L+P +S YV L+++YA G+W+ E
Sbjct: 493 CKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEK 552
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R M E ++K G S I+
Sbjct: 553 VRELMDEKFIRKERGISWID 572
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 191/421 (45%), Gaps = 41/421 (9%)
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G E + L GI F LL+ C + G+CVH + +GF+R
Sbjct: 38 SSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPT 97
Query: 136 SIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+I ++ +Y CG+ + KVFD+MS R++ N M+ G+ K GDV+ LF M E
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VVSWN ++ + K G +EA+ L+ + R + + VL +C +L + + + +
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE--------------------- 293
H +G +V + +++VD Y KCG + AR +F E
Sbjct: 218 HGQVLVAGFLSNLV-LSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGD 276
Query: 294 ----------IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+P KN VSW+A+ISG A N G ++ + +M+ G++P + TF L
Sbjct: 277 MNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCA 336
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CA ++ +++ + + N ++D+ + G + + + M + +
Sbjct: 337 CASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVV 395
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLL-----SNIYAEGGRWDDAE 456
+W +++S+ +GH E A +++ L+P V+L S + EG R+ A
Sbjct: 396 VWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Query: 457 T 457
T
Sbjct: 456 T 456
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 33/258 (12%)
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
L GR EAL + + L V +L +CA+ G+ +H + + +G R
Sbjct: 37 LSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
V N L+ Y +CG AR VF ++ +N+ SWN M++G A G +L+++M+
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 327 AKGVSP-------------------------------NKATFVGVLTCCAHAGLVEKARE 355
K V N +F GVL C ++ A++
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQ 216
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ + + + NL +VD + G +R A L M ++ A W +++S
Sbjct: 217 VHGQVL-VAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHA-WTTIVSGYAKW 274
Query: 416 GHVELAEHAVKELINLEP 433
G + A ++ P
Sbjct: 275 GDMNSASELFHQMPEKNP 292
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 210/340 (61%), Gaps = 4/340 (1%)
Query: 141 VVELYTSCGQMDDGMKV-FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+++LY S G +D +V + + DV+ N M+ G+ K GD+ +F M ER++VS
Sbjct: 119 LLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVS 178
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ M+ + ++G EAL +F M + F D +V+VL CA LGAV+ G+W+H Y E
Sbjct: 179 WSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLE 238
Query: 260 --SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
S G R + + ALVD YCKCG ++ A VF + R++VV WNAMI GLA NG GE
Sbjct: 239 TGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGER 298
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+EL+ +M+ KG PN++TF+ VL C H G V++ + +F SM + I P EHYGC+
Sbjct: 299 ALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHYGCLA 357
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G V EA L+ M + P+A+ WG+L+SSC+ H + + E K LI LEP++ G
Sbjct: 358 DLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGG 417
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+L N+YA GRW++A T+R M + KK G S IE
Sbjct: 418 RYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIE 457
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 39/326 (11%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
VS G ++ A ++F +M +++ +++M+ A G E + +F + PD
Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGSIRI--GVVELYTSCGQMDDGMK 156
+LKAC +G + G+ VH + F R G++ + +V++Y CG M+D +
Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQ 270
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD + RDV++ N MI G G ++ L LFR M ++
Sbjct: 271 VFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQK--------------------- 309
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
F +E+T +AVL C G VD G+ + + G+ + G L D
Sbjct: 310 ----------GFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYG-CLAD 358
Query: 277 FYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSP-NK 334
+ G ++ A + ++P + S W A++S + +G + +++I + P +
Sbjct: 359 LLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIE--LEPYDG 416
Query: 335 ATFVGVLTCCAHAGLVEKARELFASM 360
+V + A G E+AR + M
Sbjct: 417 GRYVVLFNLYAVNGRWEEARTIRQMM 442
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 265/497 (53%), Gaps = 59/497 (11%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIFNQ 59
++I L + + L Q+HA LR + L + + + +++ YA ++F+
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 60 MRNPSVLLFNSMIKAYSLN-GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ N S ++N++I+A + + EE L+ +L+ PD++TF +LKAC +
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH +I++ GF + G++ LY SC
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC----------------------------- 199
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
G +D +F EM ERS+VSWN MI +L + G AL+LF EM+ ++FE D T+ +
Sbjct: 200 --GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQS 256
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGILDTARNV 290
VL CA LG++ +G W H++ L RK V V N+L++ YCKCG L A V
Sbjct: 257 VLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVSPNKATFVGVLTCCAHAG 348
F+ + ++++ SWNAMI G A +GR E + +++M+ K V PN TFVG+L C H G
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 371
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
V K R+ F M + I P LEHYGC+VD++ R+G + EA D++ SM ++P+A IW SL
Sbjct: 372 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 409 LSSCRTHG-HVELAEHAVKELINLEPWN-------SGNYVLLSNIYAEGGRWDDAETLRM 460
L +C G VEL+E + +I + N SG YVLLS +YA RW+D +R
Sbjct: 432 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 491
Query: 461 WMRENNVKKSPGQSLIE 477
M E+ ++K PG S IE
Sbjct: 492 LMSEHGIRKEPGCSSIE 508
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 230/429 (53%), Gaps = 33/429 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M + +NSMI Y+ G E + LF + + G P+ T +
Sbjct: 200 DVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITSVFS 259
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C GDL G+ V I + + ++E+Y C +DD + FD
Sbjct: 260 ICAKSGDLDTGKRVRDLIGEDDLQNV-IVHTALMEMYVKCRAIDDARREFDR-------- 310
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M +R VV+W+ MI+ ++GR E+L LF M+
Sbjct: 311 -----------------------MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC 347
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+E T+V V+ CA+LG+ ++ + I +YAE+ L +G+AL+D Y +CG + AR
Sbjct: 348 RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRL-PLTSYLGSALIDMYTRCGHVGRAR 406
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF + +K V++WN+MI GLA NG E + LYE+M GV PN+ TFV +L C HAG
Sbjct: 407 SVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAG 466
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ F M H + P +EH C+VD+L +SG + EAY I M + PNA IW +L
Sbjct: 467 LVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTL 526
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LSSCR H VELA+ A ++L+ +EP NS YVLLSNIYA+ G W DA +R MR NV+
Sbjct: 527 LSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQ 586
Query: 469 KSPGQSLIE 477
K S I+
Sbjct: 587 KLSAYSWIK 595
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 180/402 (44%), Gaps = 35/402 (8%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+ A +F+ + P+ L ++ + + S + ++ F+ + G + + K+C
Sbjct: 70 RAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSC 129
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
G+ VH + G + +V+ Y G M+ + VFDEM +D I N
Sbjct: 130 ALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPIN 189
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+I G+ K GDVDK LF M R+ SWN MI+ G EAL LF M +
Sbjct: 190 CLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARP 249
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ T+ +V ICA+ G +D G+ + L + V V AL++ Y KC +D AR
Sbjct: 250 NAITITSVFSICAKSGDLDTGKRVRDLIGEDDL--QNVIVHTALMEMYVKCRAIDDARRE 307
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG-- 348
F + +++VV+W+ MI+G A NGR +EL+E+M A PN+ T VGV++ CA G
Sbjct: 308 FDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSD 367
Query: 349 --------LVEKARELFASMTG---------------LHSIVPNLEHYG-----CMVDVL 380
E R S G S+ +E G M+ L
Sbjct: 368 ELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGL 427
Query: 381 GRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVE 419
+G +A L M+ ++PN + +LL++C G V+
Sbjct: 428 AMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVD 469
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 249/441 (56%), Gaps = 13/441 (2%)
Query: 49 EIKYATKIFNQMR----NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
++ A+++F+QM P+ + + S++ +++ G EE + LF ++ G+ P A
Sbjct: 220 DVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLA 279
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L C + L GQ +HG +++ GF + + ++ LY G + D K+F EM +
Sbjct: 280 VVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVK 339
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRER--------SVVSWNLMISSLGKSGRDSEA 216
+++ N +I F + G DK L L ++ + +V++W+ +I G E+
Sbjct: 340 NLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEES 399
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L +F +M+ + + T+ +VL ICA L A+++G+ +H + + + V+ VGN L++
Sbjct: 400 LEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVL-VGNGLIN 458
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG VF+++ ++ +SWN+MI+G +G G+ + + MI G P+ T
Sbjct: 459 MYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVT 518
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
F+ L+ C+HAGLV + LF+ M I P +EHY CMVD+LGR+G V EA ++I+ M
Sbjct: 519 FIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGM 578
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+ PNA IW SLL+SCR H +LAE A ++ NL +G+++LLSNI+A RW+D+
Sbjct: 579 PMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSA 638
Query: 457 TLRMWMRENNVKKSPGQSLIE 477
+R+ R +KK PG S IE
Sbjct: 639 RVRISARAKGLKKVPGWSWIE 659
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 12/364 (3%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR---NPS 64
LL N H Q+H+ + + S + A VS+ + A K+F +
Sbjct: 44 LLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSN 103
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
LL+NS+I+A +G E ++L+ ++N G+ D +TF LL+A +G + + +H
Sbjct: 104 FLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHC 163
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+++ GF+ + ++ +Y +MDD KVFD+M + V+ N M+ G+ DV+
Sbjct: 164 HVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNG 223
Query: 185 GLYLFREMR----ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+F +M E + V+W ++SS + G E + LF +MR + + VL
Sbjct: 224 ASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLS 283
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
+CA L ++ GQ IH Y G + + NAL+ Y K G + A +F E+ KN+V
Sbjct: 284 VCADLATLNSGQMIHGYMVKGG-FNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLV 342
Query: 301 SWNAMISGLAFNGRGELGVELYEQM----IAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
SWNA+IS A +G + +EL Q+ + PN T+ ++ A GL E++ E+
Sbjct: 343 SWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEV 402
Query: 357 FASM 360
F M
Sbjct: 403 FRKM 406
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++H H +R ++ + L+ L + + CG+ K +F ++ N + +NSMI Y
Sbjct: 436 EMHGHVIRARMDDNVLVGNGLINMYTKCGSF---KPGFMVFEKLENRDSISWNSMIAGYG 492
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+G ++ + F + G PD TF L AC G + G + + +R F+
Sbjct: 493 THGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQ-MRQNFK 547
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 230/429 (53%), Gaps = 33/429 (7%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A ++F+ M + +NSMI Y+ G E + LF + + G P+ T +
Sbjct: 151 DVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITSVFS 210
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C GDL G+ V I + + ++E+Y C +DD + FD
Sbjct: 211 ICAKSGDLDTGKRVRDLIGEDDLQNV-IVHTALMEMYVKCRAIDDARREFDR-------- 261
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M +R VV+W+ MI+ ++GR E+L LF M+
Sbjct: 262 -----------------------MSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC 298
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+E T+V V+ CA+LG+ ++ + I +YAE+ L +G+AL+D Y +CG + AR
Sbjct: 299 RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRL-PLTSYLGSALIDMYTRCGHVGRAR 357
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF + +K V++WN+MI GLA NG E + LYE+M GV PN+ TFV +L C HAG
Sbjct: 358 SVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAG 417
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ F M H + P +EH C+VD+L +SG + EAY I M + PNA IW +L
Sbjct: 418 LVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTL 477
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
LSSCR H VELA+ A ++L+ +EP NS YVLLSNIYA+ G W DA +R MR NV+
Sbjct: 478 LSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQ 537
Query: 469 KSPGQSLIE 477
K S I+
Sbjct: 538 KLSAYSWIK 546
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 179/402 (44%), Gaps = 35/402 (8%)
Query: 51 KYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+ A +F+ + P+ L ++ + + S + ++ F+ + G + + K+C
Sbjct: 21 RAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSC 80
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
G+ VH + G + +V+ Y G M+ + FDEM +D I N
Sbjct: 81 ALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPIN 140
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+I G+ K GDVDK LF M R+ SWN MI+ G EAL LF M +
Sbjct: 141 CLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARP 200
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ T+ +V ICA+ G +D G+ + L + V V AL++ Y KC +D AR
Sbjct: 201 NAITITSVFSICAKSGDLDTGKRVRDLIGEDDL--QNVIVHTALMEMYVKCRAIDDARRE 258
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG-- 348
F + +++VV+W+ MI+G A NGR +EL+E+M A PN+ T VGV++ CA G
Sbjct: 259 FDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSD 318
Query: 349 --------LVEKARELFASMTG---------------LHSIVPNLEHYG-----CMVDVL 380
E R S G S+ +E G M+ L
Sbjct: 319 ELVEQIGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGL 378
Query: 381 GRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVE 419
+G +A L M+ ++PN + +LL++C G V+
Sbjct: 379 AMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVD 420
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 236/426 (55%), Gaps = 13/426 (3%)
Query: 61 RNPSVLL-FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
R P+ LL NS+++A + P F ++L + PD Y+F L++A +
Sbjct: 150 RRPATLLAHNSLLRALARG---RRPHLAFGAFRDLPLAPDNYSFTFLVRAATALAAAAAS 206
Query: 120 Q--------CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
VH +R G ++ G V +Y + G + F E++ DV+
Sbjct: 207 ALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTA 266
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
M+ G+ D LF M +R V+WN MI+ +GR EALRLF EMR +
Sbjct: 267 MVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVG 326
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+V+ L CA+LGA++ G+W+HS A S G+ R V++G AL+D Y KCG + A VF
Sbjct: 327 EVTLVSALTACAQLGALERGKWVHSCAHSRGM-RLSVTLGTALIDMYSKCGAVAAAMEVF 385
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ +NV +W + +SGLA NG G + L+++M + GV PN TFV VL C+ AGLV+
Sbjct: 386 DSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVD 445
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R F SM H I P LEHYGCMVD+ GR+G + +A + I M + P+ +WG+LL++
Sbjct: 446 EGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNA 505
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
R H +VEL ++A+ +L+ +E N +VLLSNIYA+ W +R M+ VKK P
Sbjct: 506 SRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVP 565
Query: 472 GQSLIE 477
G S IE
Sbjct: 566 GCSAIE 571
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 269/528 (50%), Gaps = 71/528 (13%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH + + + + V++ ++ A K+F++M ++ +N++I Y+ NG
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ ++L ++ G PD T +L A VG LR+G+ +HG +R+GFE F ++
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVST 315
Query: 140 GVVEL-------------------------------YTSCGQMDDGMKVFDEMSHRDVIV 168
+V++ Y G M++F +M V +
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
Query: 169 RNLMI----HGFCKKGDVDKGLY-----------------------------------LF 189
N+ + H GDV++G + +F
Sbjct: 376 TNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIF 435
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
++ +++VSWN MI ++GR +EA+ F +M+ Q + D T+V+V+P A L +
Sbjct: 436 ENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLP 495
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+WIH + L + V V ALVD Y KCG + TAR +F + ++V +WNAMI G
Sbjct: 496 QAKWIHGLVIRTCLDKNVF-VATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGY 554
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+G G+ +EL+E+M + + PN+ TF+ VL+ C+H+GLVE+ + F SM + + P
Sbjct: 555 GTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPA 614
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
++HYG MVD+LGR+ + EA+D I+ M I P +++G++L +CR H +VEL E A +
Sbjct: 615 MDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIF 674
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+L+P + G +VLL+NIYA WD +R M + ++K+PG S++E
Sbjct: 675 DLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVE 722
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 32/337 (9%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q +++ L+ +L VS+ + A ++F + + L+++M+K Y+
Sbjct: 93 LHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYAR 152
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
N ++ V F ++ G+ P Y F LLK C DLR G+ +H ++I +GF
Sbjct: 153 NSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFA 212
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
GVV +Y C +++ K+FD M RD++ N +I G+ + G
Sbjct: 213 MTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG----------------- 255
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
GK+ AL L M+++ D T+V++LP A +G++ IG+ IH Y
Sbjct: 256 ---------FGKT-----ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGY 301
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ +G + V+V ALVD Y KCG + TAR +F + K VVSWN+MI G NG
Sbjct: 302 SMRAG-FESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA 360
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+E++++M+ + V T +G L CA G VE+ R
Sbjct: 361 AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 259/489 (52%), Gaps = 18/489 (3%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHK--LHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
R +L +++ HL +IHAH L S+L + ++ + ++
Sbjct: 94 RDPAKLAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARL 153
Query: 61 ---RNPSVLL-FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
R P+ LL NS+++A + P F ++L + PD Y+F L++A +
Sbjct: 154 LLPRRPATLLAHNSLLRALARG---RRPHLAFGAFRDLPLAPDNYSFTFLVRAATALAAA 210
Query: 117 RVGQ--------CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
VH +R G ++ G V +Y + G + F E++ DV+
Sbjct: 211 AASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVC 270
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M+ G+ D LF M +R V+WN MI+ +GR EALRLF EMR
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ E T+V+ L CA+LGA++ G+W+HS A S G+ R V++G AL+D Y KCG + A
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGM-RLSVTLGTALIDMYSKCGAVAAAM 389
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF + +NV +W + +SGLA NG G + L+++M + GV PN TFV VL C+ AG
Sbjct: 390 EVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAG 449
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ R F SM H I P LEHYGCMVD+ GR+G + +A + I M + P+ +WG+L
Sbjct: 450 LVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGAL 509
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L++ R H +VEL ++A+ +L+ +E N +VLLSNIYA+ W +R M+ VK
Sbjct: 510 LNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVK 569
Query: 469 KSPGQSLIE 477
K PG S IE
Sbjct: 570 KVPGCSAIE 578
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 243/451 (53%), Gaps = 45/451 (9%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL----- 91
L S CG L+ A +F+++ +++ + S+I Y N + E + +F
Sbjct: 123 LIDMYSKCGKLSN---ARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKS 179
Query: 92 ----KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
+ +G D +L AC V + V + VHG I+ G ++ + +++ Y
Sbjct: 180 EGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAK 239
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
CG++ KV F +M E+ VVSWN MI+
Sbjct: 240 CGEVSLSRKV-------------------------------FDDMAEKDVVSWNSMIAVY 268
Query: 208 GKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
++G ++A +FH M + + +E T+ +L CA GA+ +G +H G
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN 328
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
V+ + +++D YCKCG + ARN F + KNV SW AMI+G +G ++++ QMI
Sbjct: 329 VI-MATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMI 387
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
GV PN TF+ VL C+HAG +E+ F +M+ +++ P +EHYGCMVD+LGR+G +
Sbjct: 388 WAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYI 447
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
+EAY+LI+SM +R + +WGSLL++CR H VELAE + +EL L+P N G YVLL+NIY
Sbjct: 448 KEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIY 507
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A+ GRW D E +R+ +++ + K PG SL+E
Sbjct: 508 ADAGRWKDVERMRILVKDRGLVKPPGYSLVE 538
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 207/443 (46%), Gaps = 55/443 (12%)
Query: 29 KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS-VLLFNSMIKAYSLNGPSEEPVKL 87
K+H++ HF + N T +FN+ + + V +NS+I + G S E ++
Sbjct: 17 KIHKN-----HFSTTAAATN--TNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRA 69
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F+ ++ L I P+ TF +K+C + DL G+ H + + GFE + ++++Y+
Sbjct: 70 FSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSK 129
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
CG++ + +FDE+ R+++ +I G+ + D + L +F+E
Sbjct: 130 CGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFL-------------F 176
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
KS + E + +D +++VL C+R+ + + +H A GL KV
Sbjct: 177 EKSEGNGEEV---------GTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGL-DKV 226
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI- 326
+ V N L+D Y KCG + +R VF ++ K+VVSWN+MI+ A NG E++ M+
Sbjct: 227 MGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLK 286
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL---GRS 383
A G N+ T +L CAH G + L + + V N+ ++D+ G++
Sbjct: 287 AGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM-GYVNNVIMATSIIDMYCKCGQA 345
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVL 441
R A+D ++ ++R W ++++ HG A ++I ++P NY+
Sbjct: 346 EMARNAFDGMKEKNVRS----WTAMIAGYGMHGFAREALDVFYQMIWAGVKP----NYIT 397
Query: 442 LSNIYA---------EGGRWDDA 455
++ A EG RW +A
Sbjct: 398 FISVLAACSHAGFLEEGWRWFNA 420
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 249/458 (54%), Gaps = 1/458 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+HA +R + L+ V + I + ++FN +R +V+ + S+I + G
Sbjct: 146 HLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHNVVTWTSLISGIAHFG 205
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +F ++ + D + A +L C G ++ +G+ +HG +++G +
Sbjct: 206 SQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGN 265
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+ +Y CG + F+ M+ DVI MI F G+V++ F M ER+V+S
Sbjct: 266 ATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVIS 325
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN M+ + ++ E L+L+ M Q D T V ++ C+ L +G I S A
Sbjct: 326 WNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAV 385
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
GL V SV N+ + Y +CG ++ A+N+F I KN++SWN+++ G A NG G +
Sbjct: 386 KVGLGSDV-SVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVI 444
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
E+++ M+ G P+ T++ +L+ C+H+GLV++A+ F SMT I LEH+ CMVD+
Sbjct: 445 EIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDL 504
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G ++ A D+I M +PNA+IWG+LLS+CR H E+AE A+K L+ L N +Y
Sbjct: 505 FGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESY 564
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LL+N Y+ GR + +R M+E V+K PG S IE
Sbjct: 565 ILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIE 602
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 14/364 (3%)
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC VG +R+ +HG + GF I+ ++++Y C + +VF + +
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MI+G+ K ++ + + FR+M ER VSWN +IS+ G ++L F EM Q
Sbjct: 62 WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ + T +VL CA + G+ +H+ + V+ VGN LVD Y KCG++D ++
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVL-VGNGLVDMYAKCGLIDASK 180
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF + NVV+W ++ISG+A G E +++ QM V + +L C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGET 240
Query: 349 LVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+ +L F TG++S VP + + + G +A +M+ + W
Sbjct: 241 NISIGEQLHGFTVKTGMNSSVPV---GNATLSMYAKCGDFEKASLAFETMAAH-DVISWT 296
Query: 407 SLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
++++S G+VE A + N+ WN+ + Y + W++ L + M
Sbjct: 297 TMITSFSHSGNVERARDYFNRMPERNVISWNA-----MLGAYCQNSFWEEGLKLYILMLR 351
Query: 465 NNVK 468
V+
Sbjct: 352 QEVR 355
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 173/405 (42%), Gaps = 73/405 (18%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L+E+ A F QM + +N++I A+S +G + + F + G P+ T+A +
Sbjct: 72 LHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASV 131
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHR 164
L AC + D + G+ +H I+R E F + + G+V++Y CG +D +VF+
Sbjct: 132 LSACANIYDFQWGKHLHARIVR--VEPFLDVLVGNGLVDMYAKCGLIDASKRVFN----- 184
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+RE +VV+W +IS + G E +F++MR
Sbjct: 185 --------------------------TLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMR 218
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+D + +L +C + IG+ +H + +G+ V VGNA + Y KCG
Sbjct: 219 KDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGM-NSSVPVGNATLSMYAKCGDF 277
Query: 285 DT-------------------------------ARNVFKEIPRKNVVSWNAMISGLAFNG 313
+ AR+ F +P +NV+SWNAM+ N
Sbjct: 278 EKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNS 337
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF--ASMTGLHSIVPNLE 371
E G++LY M+ + V P+ TFV ++ C+ + + ++ A GL S V +
Sbjct: 338 FWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVN 397
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ + R G + EA +L S+ N W S++ +G
Sbjct: 398 S---AITLYSRCGRIEEAQNLFDSIQ-EKNLISWNSIMGGYAQNG 438
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 237/431 (54%), Gaps = 38/431 (8%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L+E+K+ Q P ++ +N ++ ++ G + ++ F + ++G+ P+ T +
Sbjct: 452 LSEMKF------QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC V +L++G+ +HG ++R+ E + ++ +Y+ C ++ VF E+S RDV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
V WN +IS+ +SGR AL L EM
Sbjct: 566 -------------------------------VVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
E++ T+V+ LP C++L A+ G+ IH + GL + N+L+D Y +CG +
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL-DTCNFILNSLIDMYGRCGSIQK 653
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
+R +F +P++++VSWN MIS +G G V L++Q G+ PN TF +L+ C+H
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH 713
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+GL+E+ + F M +++ P +E Y CMVD+L R+G E + I M PNAA+WG
Sbjct: 714 SGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWG 773
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
SLL +CR H + +LAE+A + L LEP +SGNYVL++NIY+ GRW+DA +R M+E
Sbjct: 774 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833
Query: 467 VKKSPGQSLIE 477
V K PG S IE
Sbjct: 834 VTKPPGCSWIE 844
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 40/381 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + + + + V ++ A ++F++M +V + ++++ Y G
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +KLF L+ N G+ PD + F + KAC + + RVG+ V+ ++ GFE ++
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV-- 197
+++++ CG+MD + F+E+ +DV + N+M+ G+ KG+ K L +M+ V
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 198 --VSWNLMISSLGKSGR------------------------------------DSEALRL 219
V+WN +IS +SG+ D EAL +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F +M + + + T+ + + C L + G+ IH Y + VGN+LVD+Y
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KC ++ AR F I + ++VSWNAM++G A G E +EL +M +G+ P+ T+ G
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 340 VLTCCAHAGLVEKARELFASM 360
++T G + A E F M
Sbjct: 470 LVTGFTQYGDGKAALEFFQRM 490
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 188/415 (45%), Gaps = 46/415 (11%)
Query: 49 EIKYATKIFNQMR-----NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
+ + A+K F +M P+V+ + ++I NG E + +F + G+ P+ T
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEM 161
A + AC + LR G+ +HG I+ E + +G +V+ Y C ++ + F +
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSGRDSEAL 217
D++ N M+ G+ +G ++ + L EM+ E +++WN +++ + G AL
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F M + + T+ L C ++ + +G+ IH Y + + VG+AL+
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI-ELSTGVGSALISM 543
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y C L+ A +VF E+ ++VV WN++IS A +GR ++L +M V N T
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 338 VGVLTCCAHAGLVEKAREL--FASMTGLHS--------------------------IVP- 368
V L C+ + + +E+ F GL + ++P
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 369 -NLEHYGCMVDVLGRSGCVREAYDL---IRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+L + M+ V G G +A +L R+M ++PN + +LLS+C G +E
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 718
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 98 PDE--YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
PDE +A +L+ C + +LR+G VH +++ +G + + ++E+Y G ++D
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD+MS R+V ++ +C GD + E
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYE-------------------------------E 173
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
++LF+ M ++ D V C+ L +G+ ++ Y S G + V +++
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSIL 232
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG +D AR F+EI K+V WN M+SG G + ++ M GV P++
Sbjct: 233 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV 292
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+ +++ A +G E+A + F M GL PN+ + ++ ++G EA + R
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 396 M---SIRPNAAIWGSLLSSC 412
M ++PN+ S +S+C
Sbjct: 353 MVLEGVKPNSITIASAVSAC 372
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 265/497 (53%), Gaps = 59/497 (11%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIFNQ 59
++I L + + L Q+HA LR + L + + + +++ YA ++F+
Sbjct: 40 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 99
Query: 60 MRNPSVLLFNSMIKAYSLN-GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ N S ++N++I+A + + EE L+ +L+ PD++TF +LKAC +
Sbjct: 100 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 159
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH +I++ GF + G++ LY SC
Sbjct: 160 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC----------------------------- 190
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
G +D +F EM ERS+VSWN MI +L + G AL+LF EM+ ++FE D T+ +
Sbjct: 191 --GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQS 247
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGILDTARNV 290
VL CA LG++ +G W H++ L RK V V N+L++ YCKCG L A V
Sbjct: 248 VLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 302
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVSPNKATFVGVLTCCAHAG 348
F+ + ++++ SWNAMI G A +GR E + +++M+ K V PN TFVG+L C H G
Sbjct: 303 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 362
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
V K R+ F M + I P LEHYGC+VD++ R+G + EA D++ SM ++P+A IW SL
Sbjct: 363 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 422
Query: 409 LSSCRTHG-HVELAEHAVKELINLEPWN-------SGNYVLLSNIYAEGGRWDDAETLRM 460
L +C G VEL+E + +I + N SG YVLLS +YA RW+D +R
Sbjct: 423 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 482
Query: 461 WMRENNVKKSPGQSLIE 477
M E+ ++K PG S IE
Sbjct: 483 LMSEHGIRKEPGCSSIE 499
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 249/462 (53%), Gaps = 36/462 (7%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY- 75
Q+H+ +RH L + L + + C + A KIF+Q+ + +V + +MI Y
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
G EE + LF + + P+ +TF+ LKAC + LR+G+ V ++ GF
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ +Y G++DD K F D++ E+
Sbjct: 412 CVANSLISMYARSGRIDDARKAF------DILF-------------------------EK 440
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+++S+N +I + K+ EAL LF+E+ DQ T ++L A +G + G+ IH
Sbjct: 441 NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ SGL + SV NAL+ Y +CG +++A VF+++ +NV+SW ++I+G A +G
Sbjct: 501 ARVIKSGL-KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFA 559
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+EL+ +M+ +GV PN T++ VL+ C+H GLV + + F SM H ++P +EHY C
Sbjct: 560 TQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYAC 619
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGRSG + EA I SM + +A +W + L +CR HG++EL +HA K +I EP +
Sbjct: 620 MVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD 679
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA +WD+ +R M+E N+ K G S +E
Sbjct: 680 PAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVE 721
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 175/387 (45%), Gaps = 47/387 (12%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL-FNSMIKAYSL 77
T +H + L ++ L +S+ + + AT IF M + L+ +++M+ ++
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN 145
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
N + F + G +P+EY FA +AC + VG + G ++++G+ +
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ---- 201
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ CG +D + + G +GD+ +F +M ER+
Sbjct: 202 ----SDVCVGCGLID------------------MFVKG---RGDLVSAFKVFEKMPERNA 236
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W LMI+ L + G EA+ LF EM +E D T+ V+ CA + + +GQ +HS
Sbjct: 237 VTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQ 296
Query: 258 AESSGLYRKVVSVGNALVDFYCKC---GILDTARNVFKEIPRKNVVSWNAMISG-LAFNG 313
A GL VG L++ Y KC G + AR +F +I NV SW AMI+G + G
Sbjct: 297 AIRHGLTLDRC-VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGG 355
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
E ++L+ MI V PN TF L CA+ + ++F H++
Sbjct: 356 YDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT-----HAVKLGFSSV 410
Query: 374 GCMVDVL-------GRSGCVREAYDLI 393
C+ + L GR R+A+D++
Sbjct: 411 NCVANSLISMYARSGRIDDARKAFDIL 437
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 168/430 (39%), Gaps = 71/430 (16%)
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG + + + + G PD T++ LK C+ +G VH ++ +S +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ LY+ CGQ + +F M R +
Sbjct: 104 LNSLISLYSKCGQWEKATSIFQLMG------------------------------SSRDL 133
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+SW+ M+S + AL F +M + + +E A C+ V +G I +
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 258 AESSGLYRKVVSVGNALVDFYCKC-GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+G + V VG L+D + K G L +A VF+++P +N V+W MI+ L G
Sbjct: 194 VVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA------------------ 358
++L+ +MI G P++ T GV++ CA+ L+ ++L +
Sbjct: 254 EAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 359 ----------SMTGLHSIVPN-LEH-----YGCMVDVLGRSGCVREAYDLIRSM---SIR 399
SM I L+H + + + G EA DL R M +
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL--LSNIYAEGGRWDDAET 457
PN + S L +C + + E + L ++S N V L ++YA GR DDA
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARK 432
Query: 458 LRMWMRENNV 467
+ E N+
Sbjct: 433 AFDILFEKNL 442
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 265/477 (55%), Gaps = 41/477 (8%)
Query: 41 VSVCGTLNEIKYATKIFNQM---RNPSVLLFNSMIKAYSLNGPS-----EEPVKLFALLK 92
V++ + + ++A +F+ + +V L+ + I AY+ + S E + LF L+
Sbjct: 49 VALIASSHSPRHARAVFDSAVPAASENVYLWTATIAAYARHASSSLSAAEGALALFRLML 108
Query: 93 NLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
G+ P+ +T + +++ C + +R G VHG + +G R + +V++Y S G++
Sbjct: 109 RRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRV 168
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY------------------------ 187
D +VFDEM +V++ N M+ + + GDV+ G
Sbjct: 169 ADARRVFDEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQG 228
Query: 188 -------LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
LF EM +R+V SWN++I++ + G ++A+ +F+ MR F+ D AT+ ++
Sbjct: 229 EAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARFQPDPATMAVLMS 288
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA+LG++ I +H G V N+L+D Y KCG + A +F E K+ V
Sbjct: 289 ACAQLGSLSIASQVHGILRK-GCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTV 347
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
S+N MI LA +G G ++++++M +G+ P+ TF+GVL+ CAHAGLV + F SM
Sbjct: 348 SYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESM 407
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++I + +HY CMVD+ GR+G + EAY L R+M ++P+A +WG+L+++CR H +VE+
Sbjct: 408 RTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEV 467
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ A +ELI +EP N G YVLL+N A G +WD ET+ MR ++K+ G S +E
Sbjct: 468 GKVAARELIAIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCSWLE 524
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+Q+H + + + +L + + + A +F + R + +N MI A + +
Sbjct: 300 SQVHGILRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQH 359
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF--ERFGS 136
G + +++F + G+ PD TF +L AC G + G+ + E +R+ + E+
Sbjct: 360 GHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGK-FYFESMRTNYAIEQSPD 418
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRD-VIVRNLMIHGFCKKGDVDKGLYLFREM 192
+V+LY G +++ ++ M + V +I+ K +V+ G RE+
Sbjct: 419 HYACMVDLYGRAGLIEEAYQLARAMPVKPHAGVWGALINACRKHCNVEVGKVAAREL 475
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 261/465 (56%), Gaps = 18/465 (3%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
T H+ + + L+H+ + L+ H V A ++F++ P +++++K
Sbjct: 22 TAAHVQSLVSLLLKHQAKRRQLLQIHSQLV---------AHQVFDRRPTP----WHALLK 68
Query: 74 AYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
AYS +E + LF +N+ D Y F L+AC G+ G +HG +IR GFE
Sbjct: 69 AYSHGPFPQEALNLFRDAHRNMA--DDTYAFMFSLRACAGLAWPWTGAQLHGLVIRKGFE 126
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ Y CG + D FDEM ++V+ N+MI GF +G+++ LF M
Sbjct: 127 FHAYVHTSLINTYVVCGCLVDARMAFDEMPVKNVVSWNVMITGFAGRGEIEYARLLFERM 186
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R+VVSW +I +S EA+ L M + E TV+AV+P + +G + +G+
Sbjct: 187 PSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEGISPTEITVLAVVPAISDIGRILMGE 246
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-EIPRKNVVSWNAMISGLAF 311
+H Y E +GL + VGN+L+D Y K G + ++ VF + R+N+VSW ++ISG A
Sbjct: 247 TLHGYCEKNGLVLDI-RVGNSLIDLYAKIGSIQSSLKVFHGMLNRRNLVSWTSIISGFAM 305
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G VEL+ +M G+ PN+ TF+ VL C+H GLVE+ E F SM ++I P ++
Sbjct: 306 HGLSTEAVELFAEMRRSGIRPNRVTFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIK 365
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
H+GC++D+LGR+G + EA +I + + N+ +W +LL+ C +G VE+ + A+K++++
Sbjct: 366 HFGCIIDMLGRAGRLCEAEQVIGGLPMEVNSIVWRTLLACCSKYGEVEMGKRAMKKILHT 425
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
E + G++V++SN+ E GR+ DAE R + E N K PG +L+
Sbjct: 426 ERESGGDFVVVSNMLTELGRFSDAERSRKLLDERNAVKVPGLALV 470
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 210/340 (61%), Gaps = 4/340 (1%)
Query: 141 VVELYTSCGQMDDGMKV-FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+++LY S G +D +V + + DV+ N M+ G+ K GD+ +F M ER++VS
Sbjct: 119 LLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVS 178
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W+ M+ + ++G EAL +F M + F D +V+VL CA LGAV+ G+W+H Y E
Sbjct: 179 WSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLE 238
Query: 260 --SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
S G R + + ALVD YCKCG ++ A VF + R++VV WNAMI GLA NG GE
Sbjct: 239 TGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGER 298
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+EL+ +M+ KG PN++TF+ VL C H G V++ + +F SM + I P EHYGC+
Sbjct: 299 ALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHYGCLA 357
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G V EA L+ M + P+A+ WG+L+SSC+ H + + E K LI LEP++ G
Sbjct: 358 DLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGG 417
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YV+L N+YA GRW++A T+R M + KK G S IE
Sbjct: 418 RYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIE 457
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 39/326 (11%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
VS G ++ A ++F +M +++ +++M+ A G E + +F + PD
Sbjct: 151 MVSGYGKGGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPD 210
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGSIRI--GVVELYTSCGQMDDGMK 156
+LKAC +G + G+ VH + F R G++ + +V++Y CG M+D +
Sbjct: 211 VVVLVSVLKACAHLGAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQ 270
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFD + RDV++ N MI G G ++ L LFR M ++
Sbjct: 271 VFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQK--------------------- 309
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
F +E+T +AVL C G VD G+ + + G+ + G L D
Sbjct: 310 ----------GFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYG-CLAD 358
Query: 277 FYCKCGILDTARNVFKEIPRKNVVS-WNAMISGLAFNGRGELGVELYEQMIAKGVSP-NK 334
+ G ++ A + ++P + S W A++S + +G + +++I + P +
Sbjct: 359 LLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIE--LEPYDG 416
Query: 335 ATFVGVLTCCAHAGLVEKARELFASM 360
+V + A G E+AR + M
Sbjct: 417 GRYVVLFNLYAVNGRWEEARTIRQMM 442
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 242/423 (57%), Gaps = 11/423 (2%)
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ LLFN++ +AY G ++ + LFAL+ P+ +TF ++KA L +G +H
Sbjct: 52 TTLLFNTLNRAYLNFGQHQQTLHLFALMLAHQTPPNSHTFPSVIKAATH-SCLFIGTSLH 110
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+ I G I+ ++ +Y+ G + + KVFDE+SH ++ N + + K GD+
Sbjct: 111 TQAINRGVLYDPFIQTSLLGMYSQFGYLLNACKVFDEISHPCIVEYNATLDAYAKNGDMG 170
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM--RDQA----FELDEATVVA 237
LF+ M +R VVSW +I+ K+G EA+RLF EM D + +EAT V+
Sbjct: 171 SACCLFKSMPKRDVVSWTSVINGFAKNGLFGEAIRLFREMMLHDDVKCCFVKPNEATYVS 230
Query: 238 VLPICARL---GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
VL CA L G + IG+ IH Y + ++ V +G L+DFY K G L A V+ ++
Sbjct: 231 VLSSCANLDERGVLCIGKQIHGYIVRNEVFVTVF-IGTTLIDFYGKVGCLSNAIRVYNQM 289
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
K V +WNA+IS LA NGR E ++++++M +G+ PN+ TF+ VLT CA A LVE
Sbjct: 290 MVKKVCTWNAIISSLANNGREEQALDMFKKMKGEGLCPNEVTFIAVLTACARAKLVEIGL 349
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
ELF SM G +VP +EHYGC+VD+LG +G +REA + IR M P+A+ G+LL +C+
Sbjct: 350 ELFQSMAGEFGLVPIMEHYGCVVDLLGMAGLLREASEFIRRMPFEPDASALGALLGACKI 409
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HG ++L L+ L+P + G YV LS+I+ RW A +R M E ++ P S
Sbjct: 410 HGAIDLGNEVGSRLLELQPQHCGQYVALSSIHVGVNRWGVAADIRKTMVEARIRIVPACS 469
Query: 475 LIE 477
LI+
Sbjct: 470 LID 472
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 259/489 (52%), Gaps = 18/489 (3%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHK--LHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
R +L +++ HL +IHAH L S+L + ++ + ++
Sbjct: 94 RDPAKLAAAASSQRHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARL 153
Query: 61 ---RNPSVLL-FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDL 116
R P+ LL NS+++A + P F ++L + PD Y+F L++A +
Sbjct: 154 LLPRRPATLLAHNSLLRALARG---RRPHLAFGAFRDLPLVPDNYSFTFLVRAATALAAA 210
Query: 117 RVGQ--------CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
VH +R G ++ G V +Y + G + F E++ DV+
Sbjct: 211 AASALDAALIAGSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVC 270
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
M+ G+ D LF M +R V+WN MI+ +GR EALRLF EMR
Sbjct: 271 VTAMVGALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGA 330
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ E T+V+ L CA+LGA++ G+W+HS A S G+ R V++G AL+D Y KCG + A
Sbjct: 331 AVGEVTLVSALTACAQLGALERGKWVHSCAHSRGM-RLSVTLGTALIDMYSKCGAVAAAM 389
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
VF + +NV +W + +SGLA NG G + L+++M + GV PN TFV VL C+ AG
Sbjct: 390 EVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAG 449
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV++ R F SM H I P LEHYGCMVD+ GR+G + +A + I M + P+ +WG+L
Sbjct: 450 LVDEGRACFDSMKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGAL 509
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVK 468
L++ R H +VEL ++A+ +L+ +E N +VLLSNIYA+ W +R M+ VK
Sbjct: 510 LNASRIHKNVELGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVK 569
Query: 469 KSPGQSLIE 477
K PG S IE
Sbjct: 570 KVPGCSAIE 578
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 240/426 (56%), Gaps = 2/426 (0%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F+ M V+ +N+M+ Y+ +G E + + + GI +E++FA LL AC+
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
L++ + HG+++ +GF + +++ Y CGQM+ + FDEM+ +D+ + +
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ K GD++ LF EM E++ VSW +I+ + G + AL LF +M + ++
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T + L A + ++ G+ IH Y + + + + ++L+D Y K G L+ + VF+
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI-SSLIDMYSKSGSLEASERVFR 370
Query: 293 EIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
K + V WN MIS LA +G G + + + MI V PN+ T V +L C+H+GLVE
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SMT H IVP+ EHY C++D+LGR+GC +E I M P+ IW ++L
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR HG+ EL + A ELI L+P +S Y+LLS+IYA+ G+W+ E LR M++ V K
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Query: 472 GQSLIE 477
S IE
Sbjct: 551 AVSWIE 556
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 195/443 (44%), Gaps = 42/443 (9%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
I N + P + + S + ++ + V L GI A LL+ C
Sbjct: 3 ISNPRKRP-ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKS 61
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L+ G+ +H + +GF+R ++ ++ +Y CG+ D KVFD+M R++ N M+
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+ K G + + +F M ER VVSWN M+ + G EAL + E R + +E +
Sbjct: 122 GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFS 181
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-- 292
+L C + + + + H +G VV + +++D Y KCG +++A+ F
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV-LSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 293 -----------------------------EIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
E+P KN VSW A+I+G G G ++L+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+MIA GV P + TF L A + +E+ M ++ PN ++D+ +S
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKS 359
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVL 441
G + + + R + + W +++S+ HG A + ++I ++P + V+
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 442 L-----SNIYAEGGRWDDAETLR 459
L S + EG RW ++ T++
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQ 442
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 37/324 (11%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
I +S L +++ A K+F +M + + + ++I Y G + LF + LG
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+++TF+ L A + LR G+ +HG +IR+ + ++++Y+ G ++
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VF C DK V WN MIS+L + G +
Sbjct: 367 RVFR----------------ICD----DK----------HDCVFWNTMISALAQHGLGHK 396
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNAL 274
ALR+ +M + + T+V +L C+ G V+ G +W S G+ L
Sbjct: 397 ALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA-CL 455
Query: 275 VDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
+D + G +E+P + WNA++ +G ELG + +++I K +
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI-KLDPES 514
Query: 334 KATFVGVLTCCAHAG---LVEKAR 354
A ++ + + A G LVEK R
Sbjct: 515 SAPYILLSSIYADHGKWELVEKLR 538
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 261/475 (54%), Gaps = 34/475 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+LR + G N+ +H + KL L+ +S+ L + A K+F++M
Sbjct: 117 LLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKD 176
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+++N MI AY+ G E ++LF + GI D +T P++ + + + G+ H
Sbjct: 177 RVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHA 236
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I+R+G + S+ ++++Y C +D CK
Sbjct: 237 HILRNGSDSQVSVHNSLIDMYCECKILDSA----------------------CK------ 268
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F M ++SV+SW+ MI K+G+ AL LF +M+ + D ++ +LP
Sbjct: 269 ---IFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVH 325
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE--IPRKNVVSW 302
+GA++ +++H Y+ GL + S+ AL+ Y KCG ++ A+ +F+E I K+++ W
Sbjct: 326 IGALENVKYLHGYSMKLGL-TSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMW 384
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N+MIS A +G +LY +M P++ TF+G+LT C ++GLVEK +E F MT
Sbjct: 385 NSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTE 444
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ P+ EHY CMV++LGR+G + EA +L+++M I+P+A +WG LLS+C+ H +LAE
Sbjct: 445 SYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAE 504
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++LIN+EP N+GNY+LLSNIYA G+WD +R ++R +KK PG S +E
Sbjct: 505 FAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLE 559
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 175/399 (43%), Gaps = 38/399 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + ++ +++ + E + A ++F++ + +S+ N
Sbjct: 32 IHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDN 91
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
E ++F + + PD +TF LL+ G+ +++ + VH I S +
Sbjct: 92 GEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTA 151
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
V+ LY+ + D K+FD+M +D +V N+MI + ++
Sbjct: 152 VLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYARE--------------------- 190
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
G+ +E L LF M D T + V+ A+L VD G+ H++
Sbjct: 191 ----------GKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+G + VSV N+L+D YC+C ILD+A +F + K+V+SW+AMI G NG+ +
Sbjct: 241 NGSDSQ-VSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALS 299
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVD 378
L+ +M + G+ + + +L H G +E + L ++ GL S+ P+L ++
Sbjct: 300 LFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSL-PSLN--TALLI 356
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAI-WGSLLSSCRTHG 416
+ G + A L I I W S++S+ HG
Sbjct: 357 TYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 117/262 (44%), Gaps = 34/262 (12%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PDE T+ +L++C ++ G+ +HG +++ GF+ F + + E+Y C + ++ ++
Sbjct: 8 PDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQL 67
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
FD+ S +D + W +++ G + E +
Sbjct: 68 FDKRSVKD--------------------------------LGWPSSLTTEGPQNDNGEGI 95
Query: 218 -RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
R+F M + D T +L A L ++ + + +H A S L ++ V A++
Sbjct: 96 FRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL-VNTAVLS 154
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y K L AR +F ++P K+ V WN MI+ A G+ +EL++ M G+ + T
Sbjct: 155 LYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFT 214
Query: 337 FVGVLTCCAHAGLVEKARELFA 358
+ V++ A V+ ++ A
Sbjct: 215 ALPVISSIAQLKCVDWGKQTHA 236
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 258/479 (53%), Gaps = 55/479 (11%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLNE------------IKYATKIFNQ 59
+++ L IHA +RH + +N + H + +L+ + YA +F
Sbjct: 30 SSKHKLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTM 89
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ NP+V +N+M + Y+ + ++ + + I PD +T+ LLKA ++R G
Sbjct: 90 IHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIVSRIEPDTHTYPFLLKAISKSLNVREG 149
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H IR+GFE V V+N ++H +
Sbjct: 150 EAIHSVTIRNGFESL-------------------------------VFVQNSLLHIYAAC 178
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
GD + +F MR+R +V+ +I+ +GR SEAL LF EM + E D TVV++L
Sbjct: 179 GDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLL 238
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC-GILDTARNVFKEIPRKN 298
A LGA+++G+ +H Y GL R+ V N+L+D Y KC I + RN
Sbjct: 239 SASAELGALELGRRVHVYLLKVGL-RENSHVTNSLLDLYAKCDAIWEXERNA-------- 289
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
VSW ++I GLA NG GE +EL+ +M +G+ P++ TFVGVL C+H G++++ + F
Sbjct: 290 -VSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFR 348
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M I+P +EHYGCMVD+L R+G V++AY+ I++M ++PNA W +LL +C HGH+
Sbjct: 349 RMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHL 408
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E A L+ LEP +SG+YVLLSN+Y RW D + +R M ++ VKK+ G SL+E
Sbjct: 409 GLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVE 467
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 266/499 (53%), Gaps = 59/499 (11%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIF 57
++R +L + + L Q+HA LR + L + + + +++ YA ++F
Sbjct: 24 LDRVHATVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVF 83
Query: 58 NQMRNPSVLLFNSMIKAYSLN-GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGD 115
+ + N S ++N++I+A + + EE L+ +L+ PD++TF +LKAC +
Sbjct: 84 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 143
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
G+ VH +I++ GF + G++ LY SC
Sbjct: 144 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC--------------------------- 176
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
G +D +F EM ERS+VSWN MI +L + G AL+LF EM+ ++FE D T+
Sbjct: 177 ----GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTM 231
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGILDTAR 288
+VL CA LG++ +G W H++ L RK V V N+L++ YCKCG L A
Sbjct: 232 QSVLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAE 286
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVSPNKATFVGVLTCCAH 346
VF+ + ++++ SWNAMI G A +GR E + +++M+ K V PN TFVG+L C H
Sbjct: 287 QVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNH 346
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
G V K R+ F M + I P LEHYGC+VD++ R+G + EA D++ SM ++P+A IW
Sbjct: 347 RGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWR 406
Query: 407 SLLSSCRTHG-HVELAEHAVKELINLEPWN-------SGNYVLLSNIYAEGGRWDDAETL 458
SLL +C G VEL+E + +I + N SG YVLLS +YA RW+D +
Sbjct: 407 SLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIV 466
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M E+ ++K PG S IE
Sbjct: 467 RKLMSEHGIRKEPGCSSIE 485
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 219/363 (60%), Gaps = 32/363 (8%)
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
D+R G+ VH IR+GFE ++ +V +Y +CG E +H+
Sbjct: 10 DVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHA--------ESAHK---------- 51
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
LF M ER++V+WN +I+ +GR +EAL LF EM + E D T
Sbjct: 52 -------------LFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 98
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+V++L CA LGA+ +G+ H Y GL + GNAL+D Y KCG + A VF E+
Sbjct: 99 MVSLLSACAELGALALGRRAHVYMVKVGLDGNL-HAGNALLDLYAKCGSIRQAHKVFDEM 157
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
K+VVSW ++I GLA NG G+ +EL++++ KG+ P++ TFVGVL C+H G+V++
Sbjct: 158 EEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGF 217
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+ F M + IVP +EHYGCMVD+LGR+G V++A++ I++M ++PNA +W +LL +C
Sbjct: 218 DYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTI 277
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
HGH+ L E A +L+ LEP +SG+YVLLSN+YA RW D +R M VKK+PG S
Sbjct: 278 HGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHS 337
Query: 475 LIE 477
L+E
Sbjct: 338 LVE 340
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 44/331 (13%)
Query: 1 IERKILRLLHGRN-TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
++R I +L+ R + H I F Q+ L+ H + CG + A K+F
Sbjct: 1 MQRAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLV--HMYAACG---HAESAHKLFEL 55
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M +++ +NS+I Y+LNG E + LF + G+ PD +T LL AC +G L +G
Sbjct: 56 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 115
Query: 120 QCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
+ H +++ G + G++ G +++LY CG + KVFDEM + V+
Sbjct: 116 RRAHVYMVKVGLD--GNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVV---------- 163
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
SW +I L +G EAL LF E+ + E T V
Sbjct: 164 ---------------------SWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVG 202
Query: 238 VLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP- 295
VL C+ G VD G + E G+ K+ G +VD + G++ A + +P
Sbjct: 203 VLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG-CMVDLLGRAGLVKQAHEFIQNMPM 261
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ N V W ++ +G LG Q++
Sbjct: 262 QPNAVVWRTLLGACTIHGHLALGEVARAQLL 292
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 3/186 (1%)
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+L V G+ +HS A +G + +V V N LV Y CG ++A +F+ + +N+V+W
Sbjct: 6 AKLMDVREGEKVHSIAIRNG-FESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTW 64
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N++I+G A NGR + L+ +M +GV P+ T V +L+ CA G + R M
Sbjct: 65 NSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK 124
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ + NL ++D+ + G +R+A+ + M + + W SL+ +G + A
Sbjct: 125 V-GLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEK-SVVSWTSLIVGLAVNGFGKEAL 182
Query: 423 HAVKEL 428
KEL
Sbjct: 183 ELFKEL 188
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/443 (34%), Positives = 238/443 (53%), Gaps = 37/443 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L + CG+++E A +F+ M V+ + SMI Y LNG ++ + LF +++ G+
Sbjct: 263 LVDMYAKCGSMDE---ARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGL 319
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ T A +L AC + +L+ G+C+HG +++ ++ ++++Y C +
Sbjct: 320 RPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFS 379
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF S + V WN ++S + +EA
Sbjct: 380 VFTRTS-------------------------------RKKTVPWNALLSGCVHNKLATEA 408
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ LF +M + E++ AT ++LP L + I+SY SG + V +L+D
Sbjct: 409 IGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNI-QVATSLID 467
Query: 277 FYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
Y KCG L++A +F IP +++ W+ +I+G +G GE V L++QM+ GV PN
Sbjct: 468 IYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPND 527
Query: 335 ATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
TF VL C+HAG+V+ LF M H +PN +HY CMVD+LGR+G + EAYDLI+
Sbjct: 528 VTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIK 587
Query: 395 SMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
+M P A+WG+LL +C H +VEL E A + L LEP N+GNYVLL+ +YA GRW+D
Sbjct: 588 TMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWED 647
Query: 455 AETLRMWMRENNVKKSPGQSLIE 477
AE +R M + ++K+P SLIE
Sbjct: 648 AENVRQRMDDIGLRKAPAHSLIE 670
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 211/426 (49%), Gaps = 44/426 (10%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNL--ILAHFVSVCGTLNEIKYATKIFNQM 60
+ +L+ + T Q+HAH + L ++ +L + CG ++ A K+F+++
Sbjct: 25 QSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHN---ARKLFDEL 81
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
R LL+N MIK Y G E +K+F +L + PD YT+ ++KAC + + G
Sbjct: 82 RQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYG 141
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +HG + S F + ++ +Y +CG++++ KVFD
Sbjct: 142 RVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDA------------------- 182
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
M+E+SVVSWN MI+ K+G + AL +F++M D E+D A+VV+VL
Sbjct: 183 ------------MKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVL 230
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P C L +++G+ +H E L +K+VS NALVD Y KCG +D AR VF + ++V
Sbjct: 231 PACGYLKELEVGRRVHGLVEEKVLGKKIVS--NALVDMYAKCGSMDEARLVFDNMVERDV 288
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSW +MI+G NG + + L++ M +G+ PN T +L CA ++ R L
Sbjct: 289 VSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGW 348
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + + ++D+ + C+ ++ + S R W +LLS C H +
Sbjct: 349 VMK-QRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTS-RKKTVPWNALLSGCV---HNK 403
Query: 420 LAEHAV 425
LA A+
Sbjct: 404 LATEAI 409
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 124/306 (40%), Gaps = 44/306 (14%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H ++ +L+ + + + N + + +F + + +N+++ N
Sbjct: 345 LHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKL 404
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ E + LF + G+ + T LL A + DL+ ++ ++RSGF +
Sbjct: 405 ATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATS 464
Query: 141 VVELYTSCGQMDDGMKVFDEM--SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y+ CG ++ K+F+ + +D+ V +++I G+
Sbjct: 465 LIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGY---------------------- 502
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
G G A+ LF +M + ++ T +VL C+ G VD G ++ +
Sbjct: 503 ---------GMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKF- 552
Query: 259 ESSGLYRKVVSVGN-----ALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFN 312
+ + ++ N +VD + G +D A ++ K +P W A++ +
Sbjct: 553 ----MLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMH 608
Query: 313 GRGELG 318
ELG
Sbjct: 609 ENVELG 614
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 243/458 (53%), Gaps = 35/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH+ + + + +L F+S+ +IK A+ +F + R P ++ +N+MI Y+ NG
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNG 301
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + LF L G T L+ G L + +HG ++S F S+
Sbjct: 302 ETELSLSLFKELMLSGAKLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVST 358
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+ +Y+ +++ K+FDE E+S+ S
Sbjct: 359 ALTTVYSKLNEIESARKLFDESP-------------------------------EKSLPS 387
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MIS ++G +A+ LF EM++ F + T+ +L CA+LGA+ +G+W+H
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S+ + + V AL+ Y KCG + AR +F +P+KN V+WN MISG +G G+ +
Sbjct: 448 STD-FESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEAL 506
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ +M+ G++P TF+ VL C+HAGLV++ E+F SM + P+++HY C+VD+
Sbjct: 507 TIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDI 566
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++ A I +M I+P ++W +LL +CR H LA ++L L+P N G +
Sbjct: 567 LGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNI++ + A T+R ++ + K+PG +LIE
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 208/500 (41%), Gaps = 75/500 (15%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L L + +HL Q HA + H +L L I YA IF ++ P
Sbjct: 23 FLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPD 82
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V LFN +++ +S+N + +FA L K+ + P+ T+A + A G D R G +H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIH 142
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G+ I G + + +V++Y +++D KVFD M +D I+ N MI G+ K
Sbjct: 143 GQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ + +FR++ + + LD T++ +LP A
Sbjct: 203 ESIQVFRDL------------------------------INESCTRLDTTTLLDILPAVA 232
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L + +G IHS A +G Y V + Y KCG + A +F+E R ++V++N
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMASTLFREFRRPDIVAYN 291
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL-------------- 349
AMI G NG EL + L+++++ G +T V ++ H L
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFL 351
Query: 350 ------------------VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
+E AR+LF S +L + M+ ++G +A
Sbjct: 352 SHTSVSTALTTVYSKLNEIESARKLFD-----ESPEKSLPSWNAMISGYTQNGLTEDAIS 406
Query: 392 LIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIY 446
L R M PN +LS+C G + L + V +L+ + S YV L +Y
Sbjct: 407 LFREMQNSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESSIYVSTALIGMY 465
Query: 447 AEGGRWDDAETLRMWMRENN 466
A+ G +A L +M + N
Sbjct: 466 AKCGSIAEARRLFDFMPKKN 485
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 171/385 (44%), Gaps = 44/385 (11%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP-DEYTFAPLLK 108
++ A K+F++M +L+N+MI Y N E +++F L N D T +L
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
A + +LR+G +H ++G + G + LY+ CG++ +F E D++
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVA 289
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N MIHG+ G+ + L LF+E LM+S
Sbjct: 290 YNAMIHGYTSNGETELSLSLFKE----------LMLS---------------------GA 318
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+L +T+V+++P+ L + IH Y+ S SV AL Y K +++AR
Sbjct: 319 KLKSSTLVSLVPVSGHLMLI---YAIHGYSLKSNFLSH-TSVSTALTTVYSKLNEIESAR 374
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+F E P K++ SWNAMISG NG E + L+ +M SPN T +L+ CA G
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLG 434
Query: 349 LVEKAR---ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+ + +L S SI + ++ + + G + EA L M + N W
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVS----TALIGMYAKCGSIAEARRLFDFMP-KKNEVTW 489
Query: 406 GSLLSSCRTHGHVELAEHAVKELIN 430
+++S HGH + A E++N
Sbjct: 490 NTMISGYGLHGHGQEALTIFSEMLN 514
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 254/440 (57%), Gaps = 2/440 (0%)
Query: 39 HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP 98
H ++ L ++ A K+F++M V+ +N+++ AY+ G E + L+ + L +
Sbjct: 134 HMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGF 193
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ ++FA +L C+ + +L++ + VHG+++ +GF + +V+ Y CG+M +F
Sbjct: 194 NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLF 253
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
DEM +D+ ++ G+ K GD++ LF +M E++ VSW+ +IS ++ EAL
Sbjct: 254 DEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALD 313
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M ++ T + L CA + A+ G+ +H Y + +R V ++L+D Y
Sbjct: 314 YFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRT-YFRCNTIVVSSLIDMY 372
Query: 279 CKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
KCG+L+ + VF + K +VV WN MIS LA NG GE ++++ M+ G+ P++ TF
Sbjct: 373 SKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITF 432
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ +L+ C+H+GLV++ F +MT H + P+ EHY C++D+LGR+GC E + + +MS
Sbjct: 433 IVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMS 492
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+P+ +W +LL CR H ++EL + +I L+P +S YV L+++YA G+W+ E
Sbjct: 493 CKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEK 552
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R M E ++K G S I+
Sbjct: 553 VRELMDEKFIRKERGISWID 572
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 191/421 (45%), Gaps = 41/421 (9%)
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S G E + L G+ F LL+ C + G+CVH + +GF+R
Sbjct: 38 SSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPT 97
Query: 136 SIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+I ++ +Y CG+ + KVFD+MS R++ N M+ G+ K GDV+ LF M E
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ VVSWN ++ + K G +EA+ L+ + R + + VL +C +L + + + +
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE--------------------- 293
H +G +V + +++VD Y KCG + AR +F E
Sbjct: 218 HGQVLVAGFLSNLV-LSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGD 276
Query: 294 ----------IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+P KN VSW+A+ISG A N G ++ + +M+ G++P + TF L
Sbjct: 277 MNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCA 336
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
CA ++ +++ + + N ++D+ + G + + + M + +
Sbjct: 337 CASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVV 395
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLL-----SNIYAEGGRWDDAE 456
+W +++S+ +GH E A +++ L+P V+L S + EG R+ A
Sbjct: 396 VWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Query: 457 T 457
T
Sbjct: 456 T 456
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 33/258 (12%)
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
L GR EAL + + L V +L +CA+ G+ +H + + +G R
Sbjct: 37 LSSQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
V N L+ Y +CG AR VF ++ +N+ SWN M++G A G +L+++M+
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 327 AKGVSP-------------------------------NKATFVGVLTCCAHAGLVEKARE 355
K V N +F GVL C ++ A++
Sbjct: 157 EKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQ 216
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ + + + NL +VD + G +R A L M ++ A W +++S
Sbjct: 217 VHGQVL-VAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHA-WTTIVSGYAKW 274
Query: 416 GHVELAEHAVKELINLEP 433
G + A ++ P
Sbjct: 275 GDMNSASELFHQMPEKNP 292
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/483 (32%), Positives = 260/483 (53%), Gaps = 43/483 (8%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN--EIKYATKIFNQ 59
E++ + LL + Q HA L+ L + ++ V+ C + + YA IF Q
Sbjct: 31 EKECVSLLKKCSNMEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQ 90
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M FN+M++ + + +EE + + + G+ PD +T+ LLKAC + + G
Sbjct: 91 MDELGSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEG 150
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VH I++ G E DV V+N +I + K
Sbjct: 151 MQVHAHILKLGLEN-------------------------------DVFVQNSLISMYGKC 179
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAV 238
G++ +F +M ERSV SW+ +I++ G S+ LRL +M ++ + +E+ +V+V
Sbjct: 180 GEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSV 239
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKV----VSVGNALVDFYCKCGILDTARNVFKEI 294
L C LGA+D+G+ +H + L R V V V +L++ Y KCG L +F+++
Sbjct: 240 LSACTHLGALDLGRSVHGF-----LLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKM 294
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+KN +S++ MISGLA +G G G+ ++ +M+ +G+ P+ +VGVL C+HAGLV++
Sbjct: 295 AKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGL 354
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
+ F M H I P ++HYGCMVD++GR+G + EA +LI+SM + PN +W SLLS+ +
Sbjct: 355 QCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKV 414
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H +++ E A K+L L+ + +YV+LSN+YA+ RW+D R M + + PG S
Sbjct: 415 HNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFS 474
Query: 475 LIE 477
L+E
Sbjct: 475 LVE 477
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 247/440 (56%), Gaps = 34/440 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWP 98
+++ L++ A K+F+ + V+ +N+M+KAY G + E ++F ++K + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ T A +L AC GDL +G+ V + E + ++ +Y CG++ + +VF
Sbjct: 253 NAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVF 312
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D + +D+ V+WN MI+ ++G +EA+
Sbjct: 313 DTIIDKDI-------------------------------VAWNAMITGYAQNGMSNEAIS 341
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LFH MR D+ T+ VL C+ +GA+++G + YA GLY V VG ALVD Y
Sbjct: 342 LFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVY-VGTALVDMY 400
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATF 337
KCG LD A VF+++P KNV SWNA+I GLAFNGRG+ ++ ++ M +G+ P+ TF
Sbjct: 401 AKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITF 460
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL+ C HAGLV+ + F S+T I+P +EHY CMVD+L RSG + EA+D I +
Sbjct: 461 IGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIP 520
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ +A + G+LL++CR +VE+ E + +I LEP NS NYV+ S IYA R DD+
Sbjct: 521 DKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R MRE V K+PG S +E
Sbjct: 581 MRGLMRERGVNKTPGCSWVE 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 29 KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF 88
++ +L+ + + + EI A ++F+ + + ++ +N+MI Y+ NG S E + LF
Sbjct: 284 RMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLF 343
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
++ G+ PD+ T A +L AC VG L +G + G R G + +V++Y C
Sbjct: 344 HSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKC 403
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G +D ++VF +M ++V N +I G L
Sbjct: 404 GDLDKAIEVFRKMPCKNVASWNALICG-------------------------------LA 432
Query: 209 KSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRK 266
+GR EA++ F MR ++ + D+ T + VL C G V G+ W +S + K
Sbjct: 433 FNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPK 492
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+ + +VD + G L+ A + ++IP K
Sbjct: 493 IEHY-SCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+++ + R L+ + + V + ++ A ++F +M +V +N++I + N
Sbjct: 375 SELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFN 434
Query: 79 GPSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G +E ++ F L++N G+ PD+ TF +L A CVH +++ G F S+
Sbjct: 435 GRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA-----------CVHAGLVKDGKRWFNSL 483
Query: 138 RIG------------VVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDK 184
+V+L G +++ +++ + D ++ ++ K +V+
Sbjct: 484 TPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEI 543
Query: 185 GLYLF-REMRERSVVSWNLMISS--LGKSGRDSEALRLFHEMRDQ 226
G + R ++ SWN ++SS S R ++ ++ MR++
Sbjct: 544 GERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRER 588
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 246/446 (55%), Gaps = 24/446 (5%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWP--------- 98
I A +F++M +V+ +N M+ Y P EE KLF +KN W
Sbjct: 251 IADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARA 310
Query: 99 ----------DEYTFAPLL-KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG-VVELYT 146
D+ +F + K L G L+ I G E ++ ++ Y
Sbjct: 311 GKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYV 370
Query: 147 SCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISS 206
CG +++ M +F M ++D++ N MI G+ + G + K + +FR M R+ VSWN +IS
Sbjct: 371 QCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISG 430
Query: 207 LGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRK 266
++ R +AL F MR D +T + L CA L + +G+ +H+ SG
Sbjct: 431 FVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHIND 490
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI 326
+ GNAL+ Y KCG + A+ +F E+ K++VSWNA+I G A NG+G + ++ +M
Sbjct: 491 SFA-GNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREME 549
Query: 327 AKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCV 386
A GV P++ TFVG+L+ C+HAGL+++ F SMT + + P EHY CMVD+LGR+G +
Sbjct: 550 ANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKL 609
Query: 387 REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIY 446
EA++L++ M I+PNA +WG+LL +C H + ELA+ A + L LEP + NYVLLSNI
Sbjct: 610 NEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLLSNIS 669
Query: 447 AEGGRWDDAETLRMWMRENNVKKSPG 472
AE G+WD++E R ++E V K PG
Sbjct: 670 AEAGKWDESEKARASIKEKGVNKPPG 695
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GQ+ ++FD M R+ + N M+ + G +D+ LF M R+ VSWN MI++L
Sbjct: 32 GQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALS 91
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
GR ++A LF M + DE + ++ AR G +++ + + K
Sbjct: 92 DHGRVADARSLFDRMPVR----DEFSWTVMVSCYARGGDLELARDVLDRMPGD----KCT 143
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+ NA++ Y K G D A + +E+P ++VSWN+ ++GL +G V+ +++M+
Sbjct: 144 ACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKD 203
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
S N +L G + A FA + PN+ + +++ R+G + +
Sbjct: 204 MTSWNL-----MLAGFVRTGDLNAASSFFAKIES-----PNVISWVTLLNGYCRAGRIAD 253
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
A DL M R N W +L + H+ E A K + NS ++ + + A
Sbjct: 254 ARDLFDRMPER-NVVAWNVMLDG---YVHLSPIEEACKLFDEMPIKNSISWTTIISGLAR 309
Query: 449 GGRWDDAETL 458
G+ +A+ L
Sbjct: 310 AGKLQEAKDL 319
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 174/395 (44%), Gaps = 41/395 (10%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I A +F+ M + + +N+MI A S +G + LF + DE+++ ++
Sbjct: 65 IDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPV----RDEFSWTVMVSC 120
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
GDL + + V + R ++ + ++ Y G+ DD MK+ EM D++
Sbjct: 121 YARGGDLELARDV---LDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSW 177
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N + G + G++ + + F EM + + SWNLM++ ++G + A F ++
Sbjct: 178 NSALAGLTQSGEMVRAVQFFDEM-VKDMTSWNLMLAGFVRTGDLNAASSFFAKIESP--- 233
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV----VSVGNALVDFYCKCGILD 285
+ + V +L R G + A++ L+ ++ V N ++D Y ++
Sbjct: 234 -NVISWVTLLNGYCRAGRI---------ADARDLFDRMPERNVVAWNVMLDGYVHLSPIE 283
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A +F E+P KN +SW +ISGLA G+ + +L ++M V+ A G L
Sbjct: 284 EACKLFDEMPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYL---- 339
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI- 404
+ + AR +F M +H V + M+ + G + EA L + M PN +
Sbjct: 340 QRNMADDARRIFDGME-VHDTVC----WNTMISGYVQCGILEEAMLLFQRM---PNKDMV 391
Query: 405 -WGSLLSSCRTHGHVELAEHAVKEL--INLEPWNS 436
W ++++ G + A + + N WNS
Sbjct: 392 SWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNS 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 36/223 (16%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NA++ + G +D AR +F +P +N VSWNAMI+ L+ +GR L+++M +
Sbjct: 53 NAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVR--- 109
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
++ ++ +++C A G +E AR++ M G Y M+ ++G +A
Sbjct: 110 -DEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTAC----YNAMISGYAKNGRFDDAMK 164
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI-NLEPWN--------SGN---- 438
L+R M P+ W S L+ G + A E++ ++ WN +G+
Sbjct: 165 LLREMPA-PDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAA 223
Query: 439 --------------YVLLSNIYAEGGRWDDAETLRMWMRENNV 467
+V L N Y GR DA L M E NV
Sbjct: 224 SSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNV 266
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
+ G L AR +F +P +N V++NAM+S LA +GR + L++ M + N ++
Sbjct: 29 ARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGR----NTVSWN 84
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
++ + G V AR LF M V + + MV R G + A D++ M
Sbjct: 85 AMIAALSDHGRVADARSLFDRMP-----VRDEFSWTVMVSCYARGGDLELARDVLDRMPG 139
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNSG 437
A + +++S +G + A ++E+ +L WNS
Sbjct: 140 DKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSA 180
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+H +R + +S I A +IF++M ++ +N++I Y+ NG
Sbjct: 477 QLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNG 536
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVG 114
E + +F ++ G+ PDE TF +L AC G
Sbjct: 537 QGTEAIAVFREMEANGVRPDEVTFVGILSACSHAG 571
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 214/358 (59%), Gaps = 9/358 (2%)
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSC--GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
H + ++ G G + ++ Y+ C G ++ K+FDEM H+D + + MI +
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY---- 56
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ +F M E+ +V+WN +I+ +G+ +EAL L+ M + E D T+V++L
Sbjct: 57 -FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLS 115
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNV 299
CA L + +G+ H Y GL K + NAL+D Y KCG + AR +F E+ +NV
Sbjct: 116 ACAELATLVLGRRAHVYMVKVGL-NKNLHANNALLDLYAKCGTISEARKIFDEMGIERNV 174
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
VSW ++I GLA NG G+ +E ++ M +G+ P++ TFVGVL C+H G+V + E F
Sbjct: 175 VSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKR 234
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + IVP +EHYGCMVD+LGR+G ++EAYD I+ M ++PNA IW +LL +C HGH+
Sbjct: 235 MKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLG 294
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L A L+ LEP +SG+YVLLSN+YA RW D +R M V+K+PG SL+E
Sbjct: 295 LGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVE 352
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 119/268 (44%), Gaps = 33/268 (12%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A K+F M ++ +NS+I ++LNG E + L+ + + G+ PD +T LL AC
Sbjct: 60 AYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAE 119
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ L +G+ H +++ G + +++LY CG + + K+FDEM
Sbjct: 120 LATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMG---------- 169
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
ER+VVSW +I L +G EAL F +M + E
Sbjct: 170 --------------------IERNVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSE 209
Query: 233 ATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
T V VL C+ G V+ G ++ E + ++ G +VD + G+L A +
Sbjct: 210 ITFVGVLYACSHCGIVNEGFEYFKRMKEQYDIVPRIEHYG-CMVDLLGRAGLLKEAYDYI 268
Query: 292 KEIP-RKNVVSWNAMISGLAFNGRGELG 318
+++P + N V W ++ +G LG
Sbjct: 269 QDMPLQPNAVIWRTLLGACTIHGHLGLG 296
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 247/440 (56%), Gaps = 34/440 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWP 98
+++ L++ A K+F+ + V+ +N+M+KAY G + E ++F ++K + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ T A +L AC GDL +G+ V + E + ++ +Y CG++ + +VF
Sbjct: 253 NVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVF 312
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D + +D+ V+WN MI+ ++G +EA+
Sbjct: 313 DTIIDKDI-------------------------------VAWNAMITGYAQNGMSNEAIS 341
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LFH MR D+ T+ VL C+ +GA+++G + YA GLY V VG ALVD Y
Sbjct: 342 LFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVY-VGTALVDMY 400
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATF 337
KCG LD A VF+++P KNV SWNA+I GLAFNGRG+ ++ ++ M +G+ P+ TF
Sbjct: 401 AKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITF 460
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL+ C HAGLV+ + F S+T I+P +EHY CMVD+L RSG + EA+D I +
Sbjct: 461 IGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIP 520
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ +A + G+LL++CR +VE+ E + +I LEP NS NYV+ S IYA R DD+
Sbjct: 521 DKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R MRE V K+PG S +E
Sbjct: 581 MRGLMRERGVNKTPGCSWVE 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 29 KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF 88
++ +L+ + + + EI A ++F+ + + ++ +N+MI Y+ NG S E + LF
Sbjct: 284 RMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLF 343
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
++ G+ PD+ T A +L AC VG L +G + G R G + +V++Y C
Sbjct: 344 HSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKC 403
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G +D ++VF +M ++V N +I G L
Sbjct: 404 GDLDKAIEVFRKMPCKNVASWNALICG-------------------------------LA 432
Query: 209 KSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRK 266
+GR EA++ F MR ++ + D+ T + VL C G V G+ W +S + K
Sbjct: 433 FNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPK 492
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+ + +VD + G L+ A + ++IP K
Sbjct: 493 IEHY-SCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+++ + R L+ + + V + ++ A ++F +M +V +N++I + N
Sbjct: 375 SELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFN 434
Query: 79 GPSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G +E ++ F L++N G+ PD+ TF +L A CVH +++ G F S+
Sbjct: 435 GRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA-----------CVHAGLVKDGKRWFNSL 483
Query: 138 RIG------------VVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDK 184
+V+L G +++ +++ + D ++ ++ K +V+
Sbjct: 484 TPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEI 543
Query: 185 GLYLF-REMRERSVVSWNLMISS--LGKSGRDSEALRLFHEMRDQ 226
G + R ++ SWN ++SS S R ++ ++ MR++
Sbjct: 544 GERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRER 588
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 260/485 (53%), Gaps = 47/485 (9%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQM 60
R IL LL G N+ L +IHAH L + + I ++ C + YA +F+++
Sbjct: 24 RAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRI 83
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA------LLKNLGIWPDEYTFAPLLKACLGVG 114
NP +NSMI+ +S S P++L A +L PD YTF+ LLKAC
Sbjct: 84 HNPQTPAWNSMIRGFS---QSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAK 140
Query: 115 DLRVGQC--VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ G+C VHG IIR G+++ DV++ +
Sbjct: 141 E--EGKCREVHGFIIRFGYDQ-------------------------------DVVLCTNL 167
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + G ++ +F EM R +VSWN MIS ++G EAL+++ +MR D
Sbjct: 168 IRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDG 227
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V++L CA +GA+ +G +H +A L + VGNAL+D Y KCG L +A ++F
Sbjct: 228 FTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIF-VGNALIDMYAKCGSLASALSIFN 286
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P+++V +WN+MI G +GRG+ + + M+ GV PN TF+G+L C+H GLV++
Sbjct: 287 SMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKE 346
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ F M+ ++ P ++HYGCMVD+ GR+G ++EA ++IRS + + +W +LL SC
Sbjct: 347 GVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSC 406
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ H +VE+ E A++ L+ L +G+ VLLS IYAE +R ++ +K +PG
Sbjct: 407 KIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPG 466
Query: 473 QSLIE 477
S IE
Sbjct: 467 WSWIE 471
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 217/421 (51%), Gaps = 39/421 (9%)
Query: 95 GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
G+ P K+C L +G+ +H R G + + + +Y CG+ DD
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE----------------------- 191
++F+EM +RDV+ N MI GF G + + +FRE
Sbjct: 67 YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126
Query: 192 ---------------MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVV 236
MR + ++SWN M++ + EA+ LF M+ E D T+
Sbjct: 127 ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLA 186
Query: 237 AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR 296
VLP C + A+ +G+ IH + + ++ + NAL+D Y CG L AR+VF +
Sbjct: 187 TVLPSCGEVSALSLGKRIHEVIKRRRMCSSML-LENALMDMYANCGCLKEARDVFDSMGT 245
Query: 297 KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
++VVSW ++IS +G G ++L+E+M +G+ P+ FV +L C+HAGL++ +
Sbjct: 246 RDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHY 305
Query: 357 FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
F SMT I P LEHY CMVD+LGR+GC+REAYD I M I+PN +WG+LL +CR H
Sbjct: 306 FYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHS 365
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++++ A L+ L P +G YVLLSNIYA GRW D +R M +KK PG S
Sbjct: 366 NMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNA 425
Query: 477 E 477
E
Sbjct: 426 E 426
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 36/298 (12%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ +I +F++MR ++ +N+M+ Y+ N E V+LF ++ GI PD T A +
Sbjct: 129 VEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATV 188
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L +C V L +G+ +H I R + ++++Y +CG + + VFD M RD
Sbjct: 189 LPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRD- 247
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
VVSW +IS+ G+ G EA+ LF +M Q
Sbjct: 248 ------------------------------VVSWTSIISAYGRHGHGREAIDLFEKMCGQ 277
Query: 227 AFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
E D VA+L C+ G +D+G+ + +S + K+ +VD + G +
Sbjct: 278 GLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYA-CMVDLLGRAGCIR 336
Query: 286 TARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
A + +P + N W A++ + ++G+ + ++ ++P + + +L+
Sbjct: 337 EAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLR--LAPKQTGYYVLLS 392
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IH R ++ S L+ L + CG L E A +F+ M V+ + S+I AY
Sbjct: 203 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKE---ARDVFDSMGTRDVVSWTSIISAYG 259
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+G E + LF + G+ PD F +L AC G L +G+
Sbjct: 260 RHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGK 303
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 262/444 (59%), Gaps = 18/444 (4%)
Query: 45 GTLNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
G L E+ +I ++M + +++ +N ++ ++ +G +E V +F + +LG PD+
Sbjct: 196 GCLEEV---VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 101 YTFAPLLKACLGVGD---LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
T + +L + VGD L +G+ +HG +I+ G + + ++++Y G + + +
Sbjct: 253 VTVSSVLPS---VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS----VVSWNLMISSLGKSGRD 213
F++ + V N I G + G VDK L +F +E++ VVSW +I+ ++G+D
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LF EM+ + + T+ ++LP C + A+ G+ H +A L V VG+A
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-HVGSA 428
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG ++ ++ VF +P KN+V WN++++G + +G+ + + ++E ++ + P+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+F +L+ C GL ++ + F M+ + I P LEHY CMV++LGR+G ++EAYDLI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M P++ +WG+LL+SCR +V+LAE A ++L +LEP N G YVLLSNIYA G W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+ +++R M +KK+PG S I+
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 198/437 (45%), Gaps = 42/437 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ HA L+ I A ++ N A + + +P++ F+S+I A +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + +F+ + + G+ PD + L K C + +VG+ +H SG + ++
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----E 194
+ +Y CG+M D KVFD MS +DV+ + ++ + +KG +++ + + EM E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
++VSWN ++S +SG EA+ +F ++ F D+ TV +VLP +++G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GI 283
H Y GL + + +A++D Y K G+
Sbjct: 275 HGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 284 LDTARNVFKEIPRK----NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+D A +F+ + NVVSW ++I+G A NG+ +EL+ +M GV PN T
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C + + R +H ++ N+ ++D+ + G + + ++ +M
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPT 451
Query: 400 PNAAIWGSLLSSCRTHG 416
N W SL++ HG
Sbjct: 452 KNLVCWNSLMNGFSMHG 468
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 101/265 (38%), Gaps = 76/265 (28%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L HGR+T ++H L +H + ++ + CG +N + +FN M +
Sbjct: 401 IAALGHGRSTHGFAVRVH---LLDNVHVGSALIDMYAK-CGRIN---LSQIVFNMMPTKN 453
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++ +NS++ +S++G ++E + +F L + PD +F LL AC G
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC-------------G 500
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++ G D+G K F MS
Sbjct: 501 QV----------------------GLTDEGWKYFKMMSEE-------------------- 518
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
Y + E ++ M++ LG++G+ EA L EM FE D A+L C
Sbjct: 519 --YGIKPRLEH----YSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSCRL 569
Query: 245 LGAVDIGQ-----WIHSYAESSGLY 264
VD+ + H E+ G Y
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTY 594
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 259/472 (54%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+N+ + +H + L Q + +++ L + +A K+F++ R ++ ++N++
Sbjct: 87 QNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAI 146
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC----LGVGDLRVGQCVHGEII 127
+A ++ E+ + L+ + +GI + +T+ +LKAC L + LR G+ +H I+
Sbjct: 147 FRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHIL 206
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R G+E + ++++Y G + VF M
Sbjct: 207 RHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP------------------------- 241
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL--DEATVVAVLPICARL 245
++++VSW+ MI+ K+ +AL LF M +A + + T+V+VL CA L
Sbjct: 242 ------DKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASL 295
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ +H+Y GL + V N L+ Y +CG + T + VF + +++V+SWN++
Sbjct: 296 AALEHGKLVHAYVLRRGL-DSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSL 354
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G+ ++++E MI +GVSP+ TF+ VL C+HAGLVE+A+ LF SM +
Sbjct: 355 ISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYR 414
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P +EHY CMVD+LGR+ + EA +LI++M +P +WGSLL SCR H +VELAE A
Sbjct: 415 IHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERAS 474
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L LEP N+GNYVLLS+IYA+ W+D +R + ++K P S IE
Sbjct: 475 AMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIE 526
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 203 MISSLGKSGRDSEALRLF---HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+I SL + G +A++L + FEL ++ C ++ G +H
Sbjct: 49 LIQSLCRGGNLKQAVQLLCCEPNPTKKTFEL-------LINSCIEQNSLSDGVDVHHRLV 101
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SGL + + L++ YC G +D A VF E K + WNA+ LA RGE +
Sbjct: 102 GSGLDQDPY-LATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLL 160
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGL----VEKARELFASMTGLHSIVPNLEHYGC 375
LY QM G+ N+ T+ VL C + L + K +E+ A + H ++
Sbjct: 161 VLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILR-HGYEGHVHVMTT 219
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
++DV R G V A + +M + N W +++ +C + + + +++ LE +
Sbjct: 220 LLDVYARFGYVSYASSVFGAMPDK-NIVSWSAMI-ACYAKNEMPMKALELFQIMMLEACD 277
Query: 436 S 436
+
Sbjct: 278 T 278
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 247/457 (54%), Gaps = 31/457 (6%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H ++R + + V + + A ++F M +V+ +N+++ YS +G
Sbjct: 144 VHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGF 203
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
SEE + LF L++ G+ D YT L+ A L VG L+VG +HG IIR+G+E I+
Sbjct: 204 SEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTA 263
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++++Y S +DD +VF EMS +DV LM+ GF D+ + F +M
Sbjct: 264 LMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM-------- 315
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
+ Q +LD ++ +L C+ GA+ G+ +H+ A
Sbjct: 316 ----------------------LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIK 353
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ + VG+A++D Y CG L+ A+ F + K+VV WNAMI+G NG G ++
Sbjct: 354 TCFANNIF-VGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAID 412
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ QM G+ P+++TFV VL C+HAG+V + ++F M ++PNL+HY C++D+L
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDIL 472
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
GR+G + AY I +M +P+ ++ +LL +CR HG+++L +++ +EP ++G YV
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYV 532
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LLSN+YA G W+ + R +R +KK PG S IE
Sbjct: 533 LLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIE 569
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 211/483 (43%), Gaps = 80/483 (16%)
Query: 18 LTQIHAHF----LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
L QIHA L H SN ++ +V CG L + A +IF+ +V+ + +I
Sbjct: 40 LQQIHAQIITSGLTHNTFLSNSLMNAYV-YCGLLAD---AKQIFHHTPYKNVVSWTILIS 95
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
+ N E + +F + P+ T + +L A +G +R+ + VH +R GFE
Sbjct: 96 GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155
Query: 134 FGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR 193
+ +V++Y+ G M ++F+ MS R+V+ N ++ G+ G F E
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHG--------FSE-- 205
Query: 194 ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
EA+ LF+ MR + +D T+++++P +G + +G
Sbjct: 206 ---------------------EAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTG 244
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
IH + +G Y + AL+D Y +D A VF E+ K+V +W M++G +
Sbjct: 245 IHGFIIRTG-YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGR 303
Query: 314 RGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFA-------------- 358
+ ++ + +M+ + + + +G+L+ C+H+G +++ R + A
Sbjct: 304 HWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG 363
Query: 359 -SMTGLHSIVPNLEH-----YG----------CMVDVLGRSGCVREAYDLIRSMS---IR 399
++ +++ NLE YG M+ G +G +A DL M +
Sbjct: 364 SAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLD 423
Query: 400 PNAAIWGSLLSSCRTHGHV----ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
P+ + + S+L +C G V ++ H VK ++ P N +Y + +I G+ D A
Sbjct: 424 PDESTFVSVLYACSHAGMVYEGLQIFYHMVKT-SHVIP-NLQHYACVIDILGRAGQLDAA 481
Query: 456 ETL 458
+
Sbjct: 482 YSF 484
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 46/324 (14%)
Query: 115 DLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
DL+ Q +H +II SG + ++ Y CG + D ++F +++V
Sbjct: 36 DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNV-------- 87
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
VSW ++IS L K+ EA+ +F EM F+ + T
Sbjct: 88 -----------------------VSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVT 124
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+ +VLP A LG + I + +H + G + V V ALVD Y K G + AR +F+ +
Sbjct: 125 ISSVLPAFANLGLIRIAKSVHCFWVRGG-FEGNVFVETALVDMYSKFGCMGVARQLFESM 183
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+NVV+WNA++SG + +G E ++L+ M KG+ + T + ++ G ++
Sbjct: 184 SERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG- 242
Query: 355 ELFASMTGLHSIV-----PNLEHY-GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
TG+H + N +H ++D+ CV +A+ + MS++ AA W +
Sbjct: 243 ------TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAA-WTLM 295
Query: 409 LSSCRTHGHVELAEHAVKELINLE 432
L+ + H + A +++ ++
Sbjct: 296 LTGFSSGRHWDRAIKHFNKMLGIQ 319
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 238/450 (52%), Gaps = 32/450 (7%)
Query: 28 HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKL 87
H + + + C +I+ ++F+ M +PS+ +N+++ YS N +E VKL
Sbjct: 318 HGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKL 377
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F ++ + PD T A +L + G+ L G+ VH ++ F + G++ +Y+
Sbjct: 378 FREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSK 437
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
CG+++ ++FD ++ D+ V WN M++ L
Sbjct: 438 CGKVEMAKRIFDRIAELDI-------------------------------VCWNSMMAGL 466
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+ D EA F +MR++ + + VL CA+L ++ G+ +HS G Y
Sbjct: 467 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREG-YMND 525
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
VG+AL+D Y KCG +D AR VF + KN V+WN MI G A NG G+ V LYE MI
Sbjct: 526 AFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIG 585
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
G P+ TFV VLT C+H+GLV+ ++F SM H + P ++HY C++D LGR+G +
Sbjct: 586 SGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLH 645
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA LI M + + IW LLSSCR + V LA A +EL +L+P NS YVLL+NIY+
Sbjct: 646 EAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYS 705
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRWDDA+ +R M N V K PG S IE
Sbjct: 706 SLGRWDDAKAVRELMSYNQVVKDPGYSWIE 735
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 181/420 (43%), Gaps = 58/420 (13%)
Query: 13 NTRTHLTQ--IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+ + HL IHAH LR +L + + N I + ++F+QM + +N+
Sbjct: 17 DKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNA 76
Query: 71 MIKAYSLNGPSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
++ AY E+ LFA + +N+ W + AC + D+ G+ HG I+
Sbjct: 77 ILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIK 136
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
G + + ++ +Y C + D ++ F GDV
Sbjct: 137 IGLDNNIYVGNALLGMYAKCRCIGDAIQAF---------------------GDVP----- 170
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
E + VS+ M+ L S + +EA RLF M +D ++ +VL +C+R G
Sbjct: 171 -----EPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCG 225
Query: 249 DI--------------GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI 294
+ GQ +H G + + + N+L+D Y K G +D+A +F +
Sbjct: 226 EFGLHDSNDVLSSDVHGQQVHCLTIKHG-FESDLHLNNSLLDMYAKNGNMDSAEMIFVNM 284
Query: 295 PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
P +VVSWN MI+G + +E ++M G P++ T+V +L C +G +E R
Sbjct: 285 PEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGR 344
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSS 411
++F M+ P+L + ++ ++ +EA L R M S+ P+ +LSS
Sbjct: 345 QMFDGMSS-----PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSS 399
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 30/249 (12%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
A LL+ C+ G+ +H ++RS + ++E Y C +D ++FD+M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
RD+ N ++ +CK +++ LF EM ER++VSWN +IS+L ++G
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG----------- 116
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
C L V+ G+ H + GL + VGNAL+ Y KC
Sbjct: 117 ------------------ACGALVDVECGRRCHGISIKIGLDNNIY-VGNALLGMYAKCR 157
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A F ++P N VS+ AM+ GLA + + L+ M+ + + + VL
Sbjct: 158 CIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLG 217
Query: 343 CCAHAGLVE 351
C+ G E
Sbjct: 218 VCSRGGCGE 226
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + + + +++ A +IF+++ ++ +NSM+ SLN
Sbjct: 411 QVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNS 470
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E F ++ G++P ++++A +L C + L G+ VH +I R G+ +
Sbjct: 471 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 530
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y+ CG +D VFD M ++ + N MIHG+ + G D
Sbjct: 531 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD---------------- 574
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
EA+ L+ +M + D T VAVL C+ G VD G I + +
Sbjct: 575 ---------------EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 619
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMIS 307
+V ++D + G L A + ++P K + + W ++S
Sbjct: 620 QEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 668
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
++ + NA++ YCK L+ A +F E+P +N+VSWN +IS L NG V++
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECG 127
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV-PNLEHYGCMVDVLGRS 383
G+S + A G+ K R + ++ + PN + M+ L S
Sbjct: 128 RRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADS 187
Query: 384 GCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV 440
V EA+ L R M I ++ S+L C G E H ++++ + +
Sbjct: 188 DQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHC 247
Query: 441 L---------------LSNIYAEGGRWDDAETLRMWMRENNV 467
L L ++YA+ G D AE + + M E +V
Sbjct: 248 LTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSV 289
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 248/458 (54%), Gaps = 46/458 (10%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IHA L+ + L H SVCG + + A +F ++ +NSMI Y
Sbjct: 31 KIHARILKFGFELDLFVRNSLIHMYSVCGRIGD---ARAMFEVCSISDLVTWNSMIDGYV 87
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
NG +LF + D +++ ++ +G GD+ +
Sbjct: 88 KNGEIGAARELFEEMPE----RDLFSWNSMIAGYVGNGDMTAAE---------------- 127
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+F++M RD++ N MI G+ + +++ LF M R+
Sbjct: 128 -------------------DLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRN 168
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VVSWN+M++ + E LR+F +M + +EAT+V+VL CA LG +D G+WIHS
Sbjct: 169 VVSWNIMLALYVRIKDYDECLRMFDKMMGETMP-NEATLVSVLTACAHLGRLDRGKWIHS 227
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y +++ + V + AL+ Y KCG +D AR+VF ++ ++VVSWN+MI G +G+ +
Sbjct: 228 YIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQAD 287
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+E++ M +G PN ATF+ VL+ CAH+G++ + F M + I P +EHYGCM
Sbjct: 288 KALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCM 347
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G +++ +LIR M + A+WG+LLS+CRTH + ELAE K LI LEP +
Sbjct: 348 VDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDI 407
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
G Y+LLSNIYA G+WDD E +R M+E + K+ G S
Sbjct: 408 GPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGLS 445
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 45/335 (13%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
P+ YTF L+K C +G + G+ +H I++ GFE +R ++ +Y+ CG++ D +
Sbjct: 8 PNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAM 67
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+ S D++ N MI G+ K G++ LF EM ER + SWN MI+ +G + A
Sbjct: 68 FEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAE 127
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
LF++M +R +VS N ++D
Sbjct: 128 DLFNKMP---------------------------------------FRDIVS-WNCMIDG 147
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y + ++ A +F +P +NVVSWN M++ + + ++++M+ + + PN+AT
Sbjct: 148 YAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETM-PNEATL 206
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
V VLT CAH G +++ + + + + I P++ ++ + + G + A D+ MS
Sbjct: 207 VSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMS 266
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
R + W S++ HG A+ A++ +++E
Sbjct: 267 NR-SVVSWNSMIMGYGMHGQ---ADKALEMFLDME 297
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 260/485 (53%), Gaps = 47/485 (9%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQM 60
R IL LL G N+ L +IHAH L + + I ++ C + YA +F+++
Sbjct: 6 RAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRI 65
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFA------LLKNLGIWPDEYTFAPLLKACLGVG 114
NP +NSMI+ +S S P++L A +L PD YTF+ LLKAC
Sbjct: 66 HNPQTPAWNSMIRGFS---QSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAK 122
Query: 115 DLRVGQC--VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
+ G+C VHG IIR G+++ DV++ +
Sbjct: 123 E--EGKCREVHGFIIRFGYDQ-------------------------------DVVLCTNL 149
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I + G ++ +F EM R +VSWN MIS ++G EAL+++ +MR D
Sbjct: 150 IRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDG 209
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T+V++L CA +GA+ +G +H +A L + VGNAL+D Y KCG L +A ++F
Sbjct: 210 FTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIF-VGNALIDMYAKCGSLASALSIFN 268
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P+++V +WN+MI G +GRG+ + + M+ GV PN TF+G+L C+H GLV++
Sbjct: 269 SMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKE 328
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
+ F M+ ++ P ++HYGCMVD+ GR+G ++EA ++IRS + + +W +LL SC
Sbjct: 329 GVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSC 388
Query: 413 RTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ H +VE+ E A++ L+ L +G+ VLLS IYAE +R ++ +K +PG
Sbjct: 389 KIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPG 448
Query: 473 QSLIE 477
S IE
Sbjct: 449 WSWIE 453
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 238/450 (52%), Gaps = 32/450 (7%)
Query: 28 HKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKL 87
H + + + C +I+ ++F+ M +PS+ +N+++ YS N +E VKL
Sbjct: 347 HGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKL 406
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTS 147
F ++ + PD T A +L + G+ L G+ VH ++ F + G++ +Y+
Sbjct: 407 FREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSK 466
Query: 148 CGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSL 207
CG+++ ++FD ++ D+ V WN M++ L
Sbjct: 467 CGKVEMAKRIFDRIAELDI-------------------------------VCWNSMMAGL 495
Query: 208 GKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV 267
+ D EA F +MR++ + + VL CA+L ++ G+ +HS G Y
Sbjct: 496 SLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREG-YMND 554
Query: 268 VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA 327
VG+AL+D Y KCG +D AR VF + KN V+WN MI G A NG G+ V LYE MI
Sbjct: 555 AFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIG 614
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
G P+ TFV VLT C+H+GLV+ ++F SM H + P ++HY C++D LGR+G +
Sbjct: 615 SGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLH 674
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYA 447
EA LI M + + IW LLSSCR + V LA A +EL +L+P NS YVLL+NIY+
Sbjct: 675 EAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYS 734
Query: 448 EGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
GRWDDA+ +R M N V K PG S IE
Sbjct: 735 SLGRWDDAKAVRELMSYNQVVKDPGYSWIE 764
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 187/449 (41%), Gaps = 87/449 (19%)
Query: 13 NTRTHLTQ--IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+ + HL IHAH LR +L + + N I + ++F+QM + +N+
Sbjct: 17 DKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNA 76
Query: 71 MIKAYSLNGPSEEPVKLFALL----------------------KNLGIW---------PD 99
++ AY E+ LFA + K LG++ P
Sbjct: 77 ILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPT 136
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
+T A +L AC + D+ G+ HG I+ G + + ++ +Y C + D ++ F
Sbjct: 137 HFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAF- 195
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
GDV E + VS+ M+ L S + +EA RL
Sbjct: 196 --------------------GDVP----------EPNEVSFTAMMGGLADSDQVNEAFRL 225
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIG--------------QWIHSYAESSGLYR 265
F M +D ++ +VL +C+R G + G Q +H G +
Sbjct: 226 FRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHG-FE 284
Query: 266 KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQM 325
+ + N+L+D Y K G +D+A +F +P +VVSWN MI+G + +E ++M
Sbjct: 285 SDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRM 344
Query: 326 IAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGC 385
G P++ T+V +L C +G +E R++F M+ P+L + ++ ++
Sbjct: 345 QYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS-----PSLSSWNTILSGYSQNEN 399
Query: 386 VREAYDLIRSM---SIRPNAAIWGSLLSS 411
+EA L R M S+ P+ +LSS
Sbjct: 400 HKEAVKLFREMQFRSVHPDRTTLAIILSS 428
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 1/249 (0%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
A LL+ C+ G+ +H ++RS + ++E Y C +D ++FD+M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
RD+ N ++ +CK +++ LF EM ER++VSWN +IS+L ++G + +AL +++
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 223 MRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
M + F T+ +VL C L V+ G+ H + GL + VGNAL+ Y KC
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIY-VGNALLGMYAKCR 186
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ A F ++P N VS+ AM+ GLA + + L+ M+ + + + VL
Sbjct: 187 CIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLG 246
Query: 343 CCAHAGLVE 351
C+ G E
Sbjct: 247 VCSRGGCGE 255
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + + + +++ A +IF+++ ++ +NSM+ SLN
Sbjct: 440 QVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNS 499
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E F ++ G++P ++++A +L C + L G+ VH +I R G+ +
Sbjct: 500 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 559
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y+ CG +D VFD M ++ + N MIHG+ + G D
Sbjct: 560 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD---------------- 603
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
EA+ L+ +M + D T VAVL C+ G VD G I + +
Sbjct: 604 ---------------EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 648
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMIS 307
+V ++D + G L A + ++P K + + W ++S
Sbjct: 649 QEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLS 697
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 239/441 (54%), Gaps = 39/441 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H S+CG + A K+F M V+ + +I Y G E + LF + +
Sbjct: 150 LVHVYSICG---DNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFL---RMNV 203
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P+ TF +L AC +G L +G+ +HG + + + + V+++Y C + D K
Sbjct: 204 EPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTDARK 263
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FDE M E+ ++SW MI L + E+
Sbjct: 264 MFDE-------------------------------MPEKDIISWTSMIGGLVQCQSPRES 292
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
L LF +M+ FE D + +VL CA LG +D G+W+H Y + + + V +G LVD
Sbjct: 293 LDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRI-KWDVHIGTTLVD 351
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG +D A+ +F +P KN+ +WNA I GLA NG G+ ++ +E ++ G PN+ T
Sbjct: 352 MYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVT 411
Query: 337 FVGVLTCCAHAGLVEKARELFASMTG-LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
F+ V T C H GLV++ R+ F MT L+++ P LEHYGCMVD+L R+G V EA +LI++
Sbjct: 412 FLAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKT 471
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + P+ I G+LLSS T+G+V + +K L N+E +SG YVLLSN+YA +W +
Sbjct: 472 MPMPPDVQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEV 531
Query: 456 ETLRMWMRENNVKKSPGQSLI 476
++R M++ + K+PG S+I
Sbjct: 532 RSVRRLMKQKGISKAPGSSII 552
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 40/303 (13%)
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
NL+IS A+ ++ F D T AVL CA+ + + HS +
Sbjct: 78 NLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVK 137
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+GL+ + V N LV Y CG A VF+++ ++VVSW +ISG G +
Sbjct: 138 TGLWCDIY-VQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAIS 196
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL----FASMTGLHSIVPN--LEHY- 373
L+ +M V PN TFV +L C G + + + F + G +V N L+ Y
Sbjct: 197 LFLRM---NVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYM 253
Query: 374 -----------------------GCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGS 407
M+ L + RE+ DL M P+ I S
Sbjct: 254 KCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTS 313
Query: 408 LLSSCRTHGHVELAEHAVKELINLE--PWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
+LS+C + G ++ V E I+ W+ L ++YA+ G D A+ + M
Sbjct: 314 VLSACASLGLLDCGRW-VHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSK 372
Query: 466 NVK 468
N++
Sbjct: 373 NIR 375
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
I H ++ +H ++ + CG I A +IFN M + ++ +N+ I ++NG
Sbjct: 334 IDCHRIKWDVHIGTTLVDMYAK-CGC---IDMAQRIFNGMPSKNIRTWNAYIGGLAINGY 389
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+E +K F L G P+E TF + AC
Sbjct: 390 GKEALKQFEDLVESGTRPNEVTFLAVFTAC 419
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 262/444 (59%), Gaps = 18/444 (4%)
Query: 45 GTLNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
G L E+ +I ++M + +++ +N ++ ++ +G +E V +F + +LG PD+
Sbjct: 196 GCLEEV---VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 101 YTFAPLLKACLGVGD---LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
T + +L + VGD L +G+ +HG +I+ G + + ++++Y G + + +
Sbjct: 253 VTVSSVLPS---VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS----VVSWNLMISSLGKSGRD 213
F++ + V N I G + G VDK L +F +E++ VVSW +I+ ++G+D
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LF EM+ + + T+ ++LP C + A+ G+ H +A L V VG+A
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-HVGSA 428
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG ++ ++ VF +P KN+V WN++++G + +G+ + + ++E ++ + P+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+F +L+ C GL ++ + F M+ + I P LEHY CMV++LGR+G ++EAYDLI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M P++ +WG+LL+SCR +V+LAE A ++L +LEP N G YVLLSNIYA G W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+ +++R M +KK+PG S I+
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 198/437 (45%), Gaps = 42/437 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ HA L+ I A ++ N A + + +P++ F+S+I A +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + +F+ + + G+ PD + L K C + +VG+ +H SG + ++
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----E 194
+ +Y CG+M D KVFD MS +DV+ + ++ + +KG +++ + + EM E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
++VSWN ++S +SG EA+ +F ++ F D+ TV +VLP +++G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GI 283
H Y GL + + +A++D Y K G+
Sbjct: 275 HGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 284 LDTARNVFKEIPRK----NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+D A +F+ + NVVSW ++I+G A NG+ +EL+ +M GV PN T
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C + + R +H ++ N+ ++D+ + G + + ++ +M
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPT 451
Query: 400 PNAAIWGSLLSSCRTHG 416
N W SL++ HG
Sbjct: 452 KNLVCWNSLMNGFSMHG 468
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 100/265 (37%), Gaps = 76/265 (28%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L HGR+T ++H L +H + ++ + CG +N + +FN M +
Sbjct: 401 IAALGHGRSTHGFAVRVH---LLDNVHVGSALIDMYAK-CGRIN---LSQIVFNMMPTKN 453
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++ +NS++ +S++G ++E + +F L + PD +F LL AC GQ
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC--------GQ---- 501
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
G D+G K F MS
Sbjct: 502 -----------------------VGLTDEGWKYFKMMSEE-------------------- 518
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
Y + E ++ M++ LG++G+ EA L EM FE D A+L C
Sbjct: 519 --YGIKPRLEH----YSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSCRL 569
Query: 245 LGAVDIGQ-----WIHSYAESSGLY 264
VD+ + H E+ G Y
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTY 594
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 247/440 (56%), Gaps = 34/440 (7%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWP 98
+++ L++ A K+F+ + V+ +N+M+KAY G + E ++F ++K + P
Sbjct: 193 LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAP 252
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ T A +L AC GDL +G+ V + E + ++ +Y CG++ + +VF
Sbjct: 253 NVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVF 312
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
D + +D+ V+WN MI+ ++G +EA+
Sbjct: 313 DTIIDKDI-------------------------------VAWNAMITGYAQNGMSNEAIS 341
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LFH MR D+ T+ VL C+ +GA+++G + YA GLY V VG ALVD Y
Sbjct: 342 LFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVY-VGTALVDMY 400
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATF 337
KCG LD A VF+++P KNV SWNA+I GLAFNGRG+ ++ ++ M +G+ P+ TF
Sbjct: 401 AKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITF 460
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+GVL+ C HAGLV+ + F S+T I+P +EHY CMVD+L RSG + EA+D I +
Sbjct: 461 IGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIP 520
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
+ +A + G+LL++CR +VE+ E + +I LEP NS NYV+ S IYA R DD+
Sbjct: 521 DKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Query: 458 LRMWMRENNVKKSPGQSLIE 477
+R MRE V K+PG S +E
Sbjct: 581 MRGLMRERGVNKTPGCSWVE 600
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 34/271 (12%)
Query: 29 KLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF 88
++ +L+ + + + EI A ++F+ + + ++ +N+MI Y+ NG S E + LF
Sbjct: 284 RMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLF 343
Query: 89 ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSC 148
++ G+ PD+ T A +L AC VG L +G + G R G + +V++Y C
Sbjct: 344 HSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKC 403
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G +D ++VF +M ++V N +I G L
Sbjct: 404 GDLDKAIEVFRKMPCKNVASWNALICG-------------------------------LA 432
Query: 209 KSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQ-WIHSYAESSGLYRK 266
+GR EA++ F MR ++ + D+ T + VL C G V G+ W +S + K
Sbjct: 433 FNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPK 492
Query: 267 VVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+ + +VD + G L+ A + ++IP K
Sbjct: 493 IEHY-SCMVDLLARSGHLEEAWDFIEKIPDK 522
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+++ + R L+ + + V + ++ A ++F +M +V +N++I + N
Sbjct: 375 SELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFN 434
Query: 79 GPSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G +E ++ F L++N G+ PD+ TF +L A CVH +++ G F S+
Sbjct: 435 GRGDEAIQHFQLMRNEEGLKPDDITFIGVLSA-----------CVHAGLVKDGKRWFNSL 483
Query: 138 RIG------------VVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDK 184
+V+L G +++ +++ + D ++ ++ K +V+
Sbjct: 484 TPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEI 543
Query: 185 GLYLF-REMRERSVVSWNLMISS--LGKSGRDSEALRLFHEMRDQ 226
G + R ++ SWN ++SS S R ++ ++ MR++
Sbjct: 544 GERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRER 588
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/476 (32%), Positives = 258/476 (54%), Gaps = 38/476 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH---FVSVCGTLNEIKYATKIFNQMR 61
I LL+ +N + Q+HA + + +NL +A+ +V V YA +F++M
Sbjct: 1086 ISTLLNCKNI-CQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYA--LFDEMP 1142
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ + ++ MI + G + K F L G+ PD YT ++KAC L +G+
Sbjct: 1143 QKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRL 1202
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+H +++ G + +V++Y C ++D +FD M +D+
Sbjct: 1203 IHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDL--------------- 1247
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V+W +MI + G E+L LF +R++ F D+ +V+++
Sbjct: 1248 ----------------VTWTVMIGGYAECGNAKESLVLFDHLREEGFVPDKIAMVSIVNA 1291
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA+LGA++ +++H Y + V+ +G A++D Y KCG +D+AR +F + KNV+S
Sbjct: 1292 CAKLGAMNKARFVHEYVNRNRFSLDVI-LGTAMIDMYAKCGDVDSAREIFDNMHHKNVIS 1350
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W+AMI+ ++G+G+ +EL+ M++ G+ PN TFV +L C+HAGLVE L + M
Sbjct: 1351 WSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMW 1410
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ P+++H+ CMVD+LGR+G + EA+ I +M++ + +W SLL +CR H ++LA
Sbjct: 1411 ESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLA 1470
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A K L+ L+P N GNY+LLSNIYA G+W D +R M + +KK PG + IE
Sbjct: 1471 EKAAKSLLELQPQNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPGYTWIE 1526
>gi|225431511|ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
gi|296088567|emb|CBI37558.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 249/477 (52%), Gaps = 41/477 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTLNEIKYATKIFNQ 59
ILR + + Q HA L H Q++L+L + S CG L + A K+F++
Sbjct: 12 ILRKCVPHSAISQAKQTHAQILVHGFIPNITLQTDLLLVY--SKCGVLQD---ARKVFDK 66
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M ++ +N +I +Y+ N + + +F +G PD +T P+ KAC G+GD +G
Sbjct: 67 MVERNMHSWNILIASYAHNCFFYDALGVFDSFLKMGFRPDHFTLPPVFKACAGIGDSYLG 126
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ +H +IR GFE + + V++ Y CG + D + F MS RD +V
Sbjct: 127 KMLHSWVIRIGFEEYVVVGSSVLDFYAKCGGLVDAWRCFVNMSWRDSVV----------- 175
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
WNLMI LGK+ +AL F +M + ++D TV ++L
Sbjct: 176 --------------------WNLMIVGLGKACFFRDALECFRDMLSEGVKMDSRTVPSIL 215
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+C G + G+ IH + ++ V++GN+L+D Y KCG L + VF + N+
Sbjct: 216 SVCGGEGDLMKGKEIHGQVVKNQIFGCEVAIGNSLIDMYAKCGCLHDSEKVFTTMSELNL 275
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V+W +MIS +G+G + L+++M G PN T +L C+H+GL+E+ R++F S
Sbjct: 276 VTWTSMISCYGVHGKGHEALALFKKMKYCGFQPNCVTITAILASCSHSGLIEQGRKIFYS 335
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ + P+ EHY CMVD+LGR G + EA++LI++M A++WG+LL+ C H ++E
Sbjct: 336 INLDYGFEPSAEHYACMVDLLGRFGYLEEAFELIKNMKSAATASVWGALLAGCLMHKNIE 395
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+ E A L LEP NS NY+ L ++Y G WD R MRE + K+PG S I
Sbjct: 396 IGEIAAHCLFELEPRNSSNYIALCSMYDSLGIWDGVSRTRAKMRELGLVKTPGCSWI 452
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 261/475 (54%), Gaps = 34/475 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
+LR + G N+ +H + KL L+ +S+ L + A K+F++M
Sbjct: 232 LLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKD 291
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+++N MI AY+ G E ++LF + GI D +T P++ + + + G+ H
Sbjct: 292 RVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHA 351
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I+R+G + S+ ++++Y C +D CK
Sbjct: 352 HILRNGSDSQVSVHNSLIDMYCECKILDSA----------------------CK------ 383
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
+F M ++SV+SW+ MI K+G+ AL LF +M+ + D ++ +LP
Sbjct: 384 ---IFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVH 440
Query: 245 LGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE--IPRKNVVSW 302
+GA++ +++H Y+ GL + S+ AL+ Y KCG ++ A+ +F+E I K+++ W
Sbjct: 441 IGALENVKYLHGYSMKLGL-TSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMW 499
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N+MIS A +G +LY +M P++ TF+G+LT C ++GLVEK +E F MT
Sbjct: 500 NSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTE 559
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ P+ EHY CMV++LGR+G + EA +L+++M I+P+A +WG LLS+C+ H +LAE
Sbjct: 560 SYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAE 619
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A ++LIN+EP N+GNY+LLSNIYA G+WD +R ++R +KK PG S +E
Sbjct: 620 FAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLE 674
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 166/355 (46%), Gaps = 35/355 (9%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L LL R N+ HL QIHA F+ H HQ+ + + + L + ++ ++F + +P+
Sbjct: 30 LSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPN 89
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ LFN++++ + G SE + ++ + + PDE T+ +L++C ++ G+ +HG
Sbjct: 90 LTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHG 149
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
+++ GF+ F + + E+Y C + ++ ++FD+ S +D
Sbjct: 150 YLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKD------------------- 190
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEAL-RLFHEMRDQAFELDEATVVAVLPICA 243
+ W +++ G + E + R+F M + D T +L A
Sbjct: 191 -------------LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIA 237
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L ++ + + +H A S L ++ V A++ Y K L AR +F ++P K+ V WN
Sbjct: 238 GLNSIQLAKIVHCIAIVSKLSGDLL-VNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWN 296
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
MI+ A G+ +EL++ M G+ + T + V++ A V+ ++ A
Sbjct: 297 IMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHA 351
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 237/457 (51%), Gaps = 53/457 (11%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + + +S+ LN ++ KIF++M+ ++ +N+MI A + N
Sbjct: 386 LHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTL 445
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ +LF ++ I P+ YT +L AC V L G+ +HG +++ E +R
Sbjct: 446 RAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTA 505
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ ++Y +CG DE + RD LF +R ++SW
Sbjct: 506 LADMYMNCG---------DEATARD----------------------LFEGCPDRDLISW 534
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N MI E + T++ VL L + GQ +H+Y
Sbjct: 535 NAMIXKA---------------------EPNSVTIINVLSSFTHLATLPQGQSLHAYVTR 573
Query: 261 SGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G + +S+ NA + Y +CG L +A N+FK +P++N++SWNAMI+G NGRG +
Sbjct: 574 RGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAM 633
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+ QM+ G PN TFV VL+ C+H+G +E +LF SM ++ P L HY C+VD+
Sbjct: 634 LAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDL 693
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
L R GC+ EA + I SM I P+A++W +LLSSCR + + A+ ++L LEP N+GNY
Sbjct: 694 LARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNY 753
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VLLSN+YA G W + +R W++E ++K PG S I
Sbjct: 754 VLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 790
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 42/365 (11%)
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
TKI Q+++P +NS+IK + + + + +++LG+ P+ T +LKAC
Sbjct: 18 TKI--QIKDPK--HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQ 73
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+ G+ +H I G + +R+G VV+ Y CG ++D VFD MS RDV++ N
Sbjct: 74 NAVERGKSIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNA 131
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
M++G+ G ++ + L REM GR++ +
Sbjct: 132 MVYGYVGWGCYEEAMLLVREM------------------GREN-------------LRPN 160
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
T+VA+L C + +G+ +H Y +G++ V AL+ FY + + +F
Sbjct: 161 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLF 219
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+ +N+VSWNAMISG G +EL+ QM+ V + T + + CA G ++
Sbjct: 220 DLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLK 279
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+++ + V +L ++++ +G + ++ L S+ R +A +W S++S+
Sbjct: 280 LGKQIH-QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR-DAPLWNSMISA 337
Query: 412 CRTHG 416
G
Sbjct: 338 YAAFG 342
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 178/414 (42%), Gaps = 83/414 (20%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
F CG + + A +F+ M + V+L+N+M+ Y G EE + L + + P+
Sbjct: 104 FYCKCGFVED---ARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPN 160
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKV- 157
T LL AC G +LR+G+ VHG +R+G F+ + ++ Y + M+V
Sbjct: 161 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY-----LRFDMRVL 215
Query: 158 ---FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
FD M R+++ N MI G+ GD K L LF +M
Sbjct: 216 PLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM---------------------- 253
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
L E++ D T++ + CA LG++ +G+ IH A + + NAL
Sbjct: 254 ----LVDEVK-----FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY-ILNAL 303
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
++ Y G L+++ +F+ +P ++ WN+MIS A G E ++L+ +M ++GV ++
Sbjct: 304 LNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 363
Query: 335 ATFVGVLTCC--------------AHA----------------------GLVEKARELFA 358
T V +L+ C AH VE +++F
Sbjct: 364 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 423
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
M G+ I N + L C E ++ +R I+PN+ S+L++C
Sbjct: 424 RMKGVDIISWNTMILALARNTLRAQAC--ELFERMRESEIKPNSYTIISILAAC 475
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 34/374 (9%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+H + LR+ + SN +A + +++ +F+ M +++ +N+MI Y G
Sbjct: 183 VHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGD 242
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ ++LF + + D T ++AC +G L++G+ +H I+ F I
Sbjct: 243 YFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 302
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ +Y++ G ++ ++F+ + +RD + W
Sbjct: 303 LLNMYSNNGSLESSHQLFESVPNRDAPL-------------------------------W 331
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA-VDIGQWIHSYAE 259
N MIS+ G EA+ LF M+ + + DE TVV +L +C L + + G+ +H++
Sbjct: 332 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 391
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SG+ R S+GNAL+ Y + +++ + +F + +++SWN MI LA N
Sbjct: 392 KSGM-RIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQAC 450
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
EL+E+M + PN T + +L C ++ R + + HSI N + D+
Sbjct: 451 ELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK-HSIEINQPLRTALADM 509
Query: 380 LGRSGCVREAYDLI 393
G A DL
Sbjct: 510 YMNCGDEATARDLF 523
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 253/466 (54%), Gaps = 5/466 (1%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ + ++H +R + + + G ++ A ++F+ + V+ + SM Y
Sbjct: 149 SRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCY 208
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
G + +F + G+ P+ T + +L AC + DL+ G+ +HG +R G
Sbjct: 209 VNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENV 268
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V LY C + VFD M HRDV+ N ++ + + DKGL LF +M +
Sbjct: 269 FVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSK 328
Query: 196 SV----VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
V +WN +I ++G+ +A+ + +M++ F+ ++ T+ + LP C+ L ++ +G
Sbjct: 329 GVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMG 388
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +H Y L + ++ ALV Y KCG L+ +RNVF I RK+VV+WN MI A
Sbjct: 389 KEVHCYVFRHWLIGDLTTM-TALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAM 447
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G G + L+E M+ G+ PN TF GVL+ C+H+ LVE+ ++F SM H + P+
Sbjct: 448 HGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDAN 507
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HY CMVDV R+G + EAY+ I+ M + P A+ WG+LL +CR + +VELA+ + +L +
Sbjct: 508 HYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEI 567
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
EP N GNYV L NI W +A R+ M+E + K+PG S ++
Sbjct: 568 EPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQ 613
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 32/317 (10%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ + + A ++F+ + P +++I A++ G E ++L+A L+ GI P F +
Sbjct: 79 VGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTV 138
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
KAC GD + VH + IR G + ++ Y C ++ +VFD++ +D
Sbjct: 139 AKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKD- 197
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
VVSW M S G L +F EM
Sbjct: 198 ------------------------------VVSWTSMSSCYVNCGLPRLGLAVFCEMGWN 227
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ + T+ ++LP C+ L + G+ IH +A G+ V V +ALV Y +C +
Sbjct: 228 GVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVF-VCSALVSLYARCLSVKQ 286
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR VF +P ++VVSWN +++ N + G+ L+ QM +KGV ++AT+ V+ C
Sbjct: 287 ARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCME 346
Query: 347 AGLVEKARELFASMTGL 363
G EKA E+ M L
Sbjct: 347 NGQTEKAVEMLRKMQNL 363
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G A+ +F IP+ + + + +IS G + LY + A+G+ P+ + F+ V
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 342 TCCAHAGLVEKARELF--ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
C +G + +E+ A G+ S + ++ G+ CV A + + ++
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMS---DAFLGNALIHAYGKCKCVEGARRVFDDLVVK 196
Query: 400 PNAAIWGSLLSSC 412
+ W S +SSC
Sbjct: 197 -DVVSWTS-MSSC 207
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 242/465 (52%), Gaps = 14/465 (3%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+Q H H L + + V ++ A F +M + N +I YS +
Sbjct: 194 SQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKS 253
Query: 79 GPSEEPVKLFALL--KNLGIWPDEYTFAPLLKACLG-VGDLRVGQCVHGEIIRSGFERFG 135
G EE +LF + + W + AC G+ R + +++R G
Sbjct: 254 GDVEEARRLFDSMPRRTSASWNS-------MIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 136 SIRIGVVELYTSCGQMDDGMKV---FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
V + G +D G + E ++VIV ++ + K +D+ + F M
Sbjct: 307 ITITTVFSICAKTGDLDTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDRM 366
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R VV+W+ MI+ ++GR E+L LF M+ + +E T+V VL CA+LG+ ++G+
Sbjct: 367 PRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 426
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
I +Y ES L +G+AL+D Y KCG + AR+VF + +K VV+WN+MI GLA N
Sbjct: 427 QIGNYIESQTLPLTSY-LGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALN 485
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G E + LY +M+ G+ PN+ TFV +LT C HAGLV+K F M + P +EH
Sbjct: 486 GFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEH 545
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
C+VD+L +SG + EAY I M + PNA IW +LLS+CR H VELA+ A +L+ LE
Sbjct: 546 CACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALE 605
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P NS YVLLSNIYA+ G W D +R MR N++K S IE
Sbjct: 606 PNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIE 650
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 243/439 (55%), Gaps = 38/439 (8%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWP 98
VS+ + A ++F++M +V+ + +++ A + +G EE ++ + G+ P
Sbjct: 121 LVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAP 180
Query: 99 DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
+ YTF+ +L AC G V +H ++ G +
Sbjct: 181 NAYTFSSVLGAC---GTPGVLAALHASTVKVGLDS------------------------- 212
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
DV VR+ +I + K GD+D G +F EM R +V WN +I+ +SG A+
Sbjct: 213 ------DVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIE 266
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
LF M+D F ++ T+ +VL C + ++ G+ +H++ Y + + + NAL+D Y
Sbjct: 267 LFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK---YERDLILHNALLDMY 323
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
CKCG L+ A +F +P+++V+SW+ MISGLA NG+ + +++ M ++GV+PN+ T V
Sbjct: 324 CKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMV 383
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
GVL C+HAGLVE F SM L I P EH+ CMVD+LGR+G + EA + IR M++
Sbjct: 384 GVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNL 443
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+A IW +LL +CR H LA +A +E++ LEP + G VLLSN YA+ +W DAE
Sbjct: 444 EPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKS 503
Query: 459 RMWMRENNVKKSPGQSLIE 477
MR+ +KK PG+S IE
Sbjct: 504 WKAMRDRGMKKEPGRSWIE 522
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 40/325 (12%)
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS-GRDSEALRLFHEMR 224
+ V N ++ + K G +D L LF M ER+VV+W ++++L + GR EALR M
Sbjct: 115 IFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMW 174
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ T +VL C G + +H+ GL V V ++L+D Y K G L
Sbjct: 175 RDGVAPNAYTFSSVLGACGTPGVLAA---LHASTVKVGLDSDVF-VRSSLIDAYMKLGDL 230
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
D R VF E+ +++V WN++I+G A +G G +EL+ +M G S N+ T VL C
Sbjct: 231 DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRAC 290
Query: 345 AHAGLVEKARELFA-------------SMTGLHSIVPNLEH---------------YGCM 376
++E R++ A ++ ++ +LE + M
Sbjct: 291 TGMVMLEAGRQVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTM 350
Query: 377 VDVLGRSGCVREA---YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH---AVKELIN 430
+ L ++G EA +DL++S + PN +L +C G VE + ++K+L
Sbjct: 351 ISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFG 410
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDA 455
++P ++ + ++ G+ D+A
Sbjct: 411 IQP-EREHHNCMVDLLGRAGKLDEA 434
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 132/303 (43%), Gaps = 34/303 (11%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +HA ++ L + + + L ++ ++F++M ++++NS+I ++
Sbjct: 198 LAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 257
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+G ++LF +K+ G ++ T +L+AC G+ L G+ VH +++ +ER +
Sbjct: 258 SGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLIL 315
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++D +F M RDVI + MI G
Sbjct: 316 HNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISG---------------------- 353
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
L ++G+ +EALR+F M+ + + T+V VL C+ G V+ G +
Sbjct: 354 ---------LAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRS 404
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGE 316
+ + N +VD + G LD A +++ + V W ++ + G
Sbjct: 405 MKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN 464
Query: 317 LGV 319
L
Sbjct: 465 LAA 467
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGI 283
D ++ ++ +C R G G+ IH + E+ G + V N+LV Y K G+
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLA-FNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
LD A +F +P +NVV+W +++ LA +GR E + M GV+PN TF VL
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLG 190
Query: 343 CCAHAGLV 350
C G++
Sbjct: 191 ACGTPGVL 198
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 256/459 (55%), Gaps = 33/459 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH++ ++H L + + + +K K+F++M ++ +NS+IKAY LN
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+ LF ++ I PD T L +G++R + V G +R G+
Sbjct: 329 PLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGW--------- 379
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
F E D+ + N ++ + K G VD +F + + V+SW
Sbjct: 380 -----------------FLE----DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISW 418
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFEL--DEATVVAVLPICARLGAVDIGQWIHSYA 258
N +IS ++G SEA+ +++ M ++ E+ ++ T V+VLP C++ GA+ G +H
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+GLY V VG +L D Y KCG LD A ++F +IPR N V WN +I+ F+G GE
Sbjct: 479 LKNGLYLDVF-VGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 537
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
V L+++M+ +GV P+ TFV +L+ C+H+GLV++ F M + I P+L+HYGCMVD
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVD 597
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+ GR+G + A + I+SM ++P+A+IWG+LLS+CR HG+V+L + A + L +EP + G
Sbjct: 598 LYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 657
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+VLLSN+YA G+W+ + +R ++K+PG S +E
Sbjct: 658 HVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSME 696
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 230/507 (45%), Gaps = 77/507 (15%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA + Q+ I A V++ L + A F+ + N V +N MI Y G
Sbjct: 73 LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132
Query: 81 SEEPVKLFAL-LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
S E ++ F+L + + G+ PD TF +LKAC V D G +H ++ GF +
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAA 189
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL---FREMRERS 196
++ LY G + + +FDEM RD+ N MI G+C+ G+ + L L R M +
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVT 249
Query: 197 VVSW--------------------------------NLMISSLGKSGRDSEALRLFHEM- 223
VVS N +I + G + ++F M
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMY 309
Query: 224 -RD--------QAFELDEATVVAVL-----------PIC----------ARLGAVDIGQW 253
RD +A+EL+E + A+L P C ++LG + +
Sbjct: 310 VRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRS 369
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
+ + G + + +++GNA+V Y K G++D+AR VF +P K+V+SWN +ISG A NG
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNG 429
Query: 314 RGELGVELYEQMIAKG--VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+E+Y M +G +S N+ T+V VL C+ AG + + +L + + + ++
Sbjct: 430 FASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVF 488
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN- 430
+ D+ G+ G + +A L + R N+ W +L++ HGH E A KE+++
Sbjct: 489 VGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 547
Query: 431 -LEPWNSGNYVLLSNIYAEGGRWDDAE 456
++P + +V L + + G D+ E
Sbjct: 548 GVKP-DHITFVTLLSACSHSGLVDEGE 573
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/476 (32%), Positives = 255/476 (53%), Gaps = 36/476 (7%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
L LL T +IH + +R+ + + + + + +++ A KIF+Q
Sbjct: 354 SFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPV 413
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+++ +MI Y LNG + +++F L + + T A +L AC G+ L +G+ +H
Sbjct: 414 DIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELH 473
Query: 124 GEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
G I+++G GS +G ++++Y CG++D + F +S +D
Sbjct: 474 GHILKNG--HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDA--------------- 516
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V WN MI+S ++G+ EA+ LF +M + D ++ A L
Sbjct: 517 ----------------VCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSA 560
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA L A+ G+ IH++ G +R + +AL+D Y KCG LD A VF + KN VS
Sbjct: 561 CANLPALHYGKEIHAFM-MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS 619
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN++I+ +GR + + L+ M+ G+ P+ TF+ +++ C HAG V++ F MT
Sbjct: 620 WNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMT 679
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
I+ +EHY CMVD+ GR+G + EA+ +I SM P+A +WG+LL +CR HG+VELA
Sbjct: 680 EELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELA 739
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E A + L +L+P NSG YVLLSN++A G+W+ +R M+E V+K PG S I+
Sbjct: 740 EVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWID 795
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 180/387 (46%), Gaps = 38/387 (9%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
+N +LA + CG L + A ++F+ M ++ +N MI Y NG +E LF +
Sbjct: 286 ANTLLAMYAK-CGHLFD---ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMI 341
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
+ + PD TF+ L LR G+ +H IIR+G ++ ++++Y C ++
Sbjct: 342 SARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVE 401
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
K+FD+ + D++V MI G+ +G
Sbjct: 402 MARKIFDQRTPVDIVVCTAMISGYV-------------------------------LNGM 430
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
++ AL +F + + + T+ +VLP CA L A+ +G+ +H + +G + VG+
Sbjct: 431 NNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG-HGGSCYVGS 489
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
A++D Y KCG LD A F I K+ V WN+MI+ + NG+ E ++L+ QM G
Sbjct: 490 AIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKY 549
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
+ + L+ CA+ + +E+ A M + +L ++D+ + G + A +
Sbjct: 550 DCVSISAALSACANLPALHYGKEIHAFMM-RGAFRSDLFAESALIDMYSKCGNLDLACRV 608
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+M + N W S++++ HG ++
Sbjct: 609 FDTMEEK-NEVSWNSIIAAYGNHGRLK 634
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
Q HA L + + + ++ L +CG + K IF Q+R +N MI+ ++
Sbjct: 67 QAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAK---NIFYQLRLWCSEPWNWMIRGFT 123
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+ G + + + + G PD+YTF ++KAC G+ + +G+ VH +I GFE
Sbjct: 124 MMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVF 183
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +++ Y+ G + D +FD M +D ++ N+M++G+ K GD D +F EMR
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE 243
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+ T VL +CA ++ G +H
Sbjct: 244 T-------------------------------NPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
SSGL V N L+ Y KCG L AR +F +P+ ++V+WN MISG NG +
Sbjct: 273 LVVSSGLEMD-SPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMD 331
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
L+ +MI+ + P+ TF L + + + +E+
Sbjct: 332 EASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEI 371
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 41/238 (17%)
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKE 293
+V++L C + G+ H+ +G+ Y ++ G L+ Y CG A+N+F +
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGIL--GTKLLGMYVLCGAFLDAKNIFYQ 106
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ WN MI G G+ + + Y +M+ G P+K TF V+ C
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACG-------- 158
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
GL+S+ LGR +D I+ M + + SL+
Sbjct: 159 --------GLNSVA------------LGRV-----VHDKIQFMGFELDVFVGSSLIKFYS 193
Query: 414 THGHVELAEHAVKELINLEPWNSGN-YVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+G + H + L + P G + ++ N Y + G WD+A + M MR +
Sbjct: 194 ENGCI----HDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPN 247
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 244/459 (53%), Gaps = 35/459 (7%)
Query: 21 IHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
IH+H + H S++ + + +S+ ++ A ++F M ++ +N++I Y+
Sbjct: 352 IHSH-ISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRE 410
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E ++L+ +++ G+ P TF LL AC G+ +H +I+RSG + G +
Sbjct: 411 DRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLAN 470
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + + VF+ RDVI S
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQARDVI-------------------------------S 499
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MI+ + G A +LF EM+++ E D T +VL C A+++G+ IH
Sbjct: 500 WNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT 559
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SGL V ++GNAL++ Y +CG L ARNVF + ++V+SW AMI G A G +
Sbjct: 560 ESGLQLDV-NLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAI 618
Query: 320 ELYEQMIAKGV-SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
EL+ QM +G P+ +TF +L+ C HAGLV + ++F+SM + ++P +EHYGC+V
Sbjct: 619 ELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVG 678
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+ +EA LI M P+AA+W +LL +CR HG++ LAEHA + L N
Sbjct: 679 LLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAV 738
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA GRWDD +R M ++K PG+S IE
Sbjct: 739 YILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 777
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 202/420 (48%), Gaps = 40/420 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH+ ++ + + +S+ G ++ A ++F + V+ +N+M+ Y+
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + LF + + GI PD+ T+ LL A L G+ +H + G IR+
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN--SDIRV 266
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
G L T C + GDVD F+ + +R VV
Sbjct: 267 GTA-LVTMC----------------------------VRCGDVDSAKQAFKGIADRDVVV 297
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N +I++L + G + EA ++ MR L+ T +++L C+ A++ G+ IHS+
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA-FNGRGELG 318
G + V +GNAL+ Y +CG L AR +F +P+++++SWNA+I+G A RGE
Sbjct: 358 EDG-HSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGE-A 415
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG-CMV 377
+ LY+QM ++GV P + TF+ +L+ CA++ + + + L S + + H ++
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI--LRSGIKSNGHLANALM 473
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWN 435
++ R G + EA ++ R + W S+++ HG E A +E+ N LEP N
Sbjct: 474 NMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 41/378 (10%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
SNL++ +V L+ A ++F +M V+ +NS+I Y+ G ++ +LF ++
Sbjct: 65 SNLLINMYVKCRSVLD----AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
N G P++ T+ +L AC +L G+ +H +II++G++R ++ ++ +Y CG +
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLP 180
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
+VF +S RDV+ N M+ + +K V
Sbjct: 181 RARQVFAGISPRDVVSYNTMLGLYAQKAYV------------------------------ 210
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
E L LF +M + D+ T + +L +D G+ IH GL + VG
Sbjct: 211 -KECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL-NSDIRVGT 268
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
ALV +CG +D+A+ FK I ++VV +NA+I+ LA +G E Y +M + GV+
Sbjct: 269 ALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVAL 328
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ T++ +L C+ + +E A +L S +++ ++ + R G + +A +L
Sbjct: 329 NRTTYLSILNACSTSKALE-AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387
Query: 393 IRSMSIRP----NAAIWG 406
+M R NA I G
Sbjct: 388 FYTMPKRDLISWNAIIAG 405
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 188/399 (47%), Gaps = 38/399 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH + L+ + V++C ++ A + F + + V+++N++I A + +G
Sbjct: 250 RIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHG 309
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + + +++ G+ + T+ +L AC L G+ +H I G I
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + ++F M RD+I N +I G+ ++ D
Sbjct: 370 ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARRED------------------ 411
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
EA+RL+ +M+ + + T + +L CA A G+ IH
Sbjct: 412 -------------RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDIL 458
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SG+ + + NAL++ Y +CG L A+NVF+ ++V+SWN+MI+G A +G E
Sbjct: 459 RSGI-KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAY 517
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHSIVPNLEHYGCMV 377
+L+++M + + P+ TF VL+ C + +E +++ +T GL V NL + ++
Sbjct: 518 KLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV-NLGN--ALI 574
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
++ R G +++A ++ S+ R + W +++ C G
Sbjct: 575 NMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCADQG 612
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 134/253 (52%), Gaps = 3/253 (1%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D+ + NL+I+ + K V +F+EM R V+SWN +IS + G +A +LF EM+
Sbjct: 61 DIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 120
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ F ++ T +++L C ++ G+ IHS +G Y++ V N+L+ Y KCG L
Sbjct: 121 NAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAG-YQRDPRVQNSLLSMYGKCGDL 179
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR VF I ++VVS+N M+ A + + L+ QM ++G+SP+K T++ +L
Sbjct: 180 PRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAF 239
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
++++ + + +T + ++ +V + R G V A + ++ R + +
Sbjct: 240 TTPSMLDEGKRIH-KLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DVVV 297
Query: 405 WGSLLSSCRTHGH 417
+ +L+++ HGH
Sbjct: 298 YNALIAALAQHGH 310
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 3/150 (2%)
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
G D E + H+ R E D AT VA+L C R + + IH+ +G+ + +
Sbjct: 8 GPDREDVSNTHQPRPT--ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIF-L 64
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
N L++ Y KC + A VFKE+PR++V+SWN++IS A G + +L+E+M G
Sbjct: 65 SNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGF 124
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASM 360
PNK T++ +LT C +E +++ + +
Sbjct: 125 IPNKITYISILTACYSPAELENGKKIHSQI 154
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 251/432 (58%), Gaps = 3/432 (0%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L + A K+F++M + +++L+N M++ Y G V L ++ G+ PD T
Sbjct: 97 LGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTA 156
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+ AC DL +G+ +H + + F + ++++YT +++ +K+F++M R++
Sbjct: 157 VTACSRARDLSLGRRIH-VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNI 215
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I +++ G+ G +DK LF + +E+ ++ W MI++ + G EAL LF +M+ Q
Sbjct: 216 ISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQ 275
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
E D TVV +L CA LGA+D G+WIH YAE + V +G AL+D Y KCG ++
Sbjct: 276 RVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAV-LGTALIDMYSKCGHIEK 334
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
+ VF + ++ +W A+I GLA NG+ +EL++ M V P+ TF+GVL+ C H
Sbjct: 335 SLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCH 394
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA-AIW 405
GLV++ R+ F +M ++ I P +EHY C+V++LGR+G + EA LI + I +A ++
Sbjct: 395 GGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLF 454
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
G+LL++C+ HG+VE++E K + + + +L+SN+YA RW+D +R M
Sbjct: 455 GALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHP 514
Query: 466 NVKKSPGQSLIE 477
VKK+ G SLIE
Sbjct: 515 TVKKTAGCSLIE 526
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 190/460 (41%), Gaps = 107/460 (23%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-GQCVHGEII 127
N +I+ + G + ++ L+ G+ D +T+ +L+A +GV L V G+ H I
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRA-VGVLKLSVEGRKAHAAAI 76
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++GF ++E+YT G++D KVFDEM R +++ N+M+ +
Sbjct: 77 KTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYI---------- 126
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+ GR S A+ L +M D T+V + C+R
Sbjct: 127 ---------------------RCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARD 165
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+ IH Y ++ ++ + V NAL+D Y K L+ A +F+++P +N++SW ++S
Sbjct: 166 LSLGRRIHVYMDN--VFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVS 223
Query: 308 GLAFNGR-------------------------------GELGVELYEQMIAKGVSPNKAT 336
G G+ E + L+ M + V P++ T
Sbjct: 224 GYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFT 283
Query: 337 FVGVLTCCAHAGL-----------------------------------VEKARELFASMT 361
V +LTCCA+ G +EK+ E+F M
Sbjct: 284 VVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQ 343
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
G + C + G++G E + ++ ++P+ + +LS+C G V+
Sbjct: 344 GRDATA--WTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 422 E---HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
HA++E+ +EP +Y L N+ G D+AE L
Sbjct: 402 RKQFHAMREVYQIEP-RVEHYSCLVNLLGRAGLLDEAERL 440
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/447 (35%), Positives = 252/447 (56%), Gaps = 12/447 (2%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H S +L + G +NE A ++F++M + V+ + +M+ Y G E LF
Sbjct: 143 HVSYTVLLGGLLDAGRVNE---ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDE 199
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ + ++ ++ G++ + + + + + ++ +G Y G
Sbjct: 200 MPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVG----YIQAGH 251
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
++D ++F+ M V N M+ GF ++G VD +F +MRER +W+ MI + ++
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQN 311
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
EAL F EM + + +V+++L +CA L +D G+ +H+ V +V
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+AL+ Y KCG LD A+ VF K++V WN+MI+G A +G GE + ++ M G+
Sbjct: 372 -SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
SP+ T++G LT C++ G V++ RE+F SMT SI P EHY CMVD+LGRSG V EA+
Sbjct: 431 SPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAF 490
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
DLI++M + P+A IWG+L+ +CR H + E+AE A K+L+ LEP N+G YVLLS+IY G
Sbjct: 491 DLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVG 550
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
RW+DA +R ++ N+ KSPG S IE
Sbjct: 551 RWEDASKMRKFISSRNLNKSPGCSWIE 577
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 54/266 (20%)
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V+ ++ G+ + G + + LF++M ER+ VS+ +++ L +GR +EA RLF EM D
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD 171
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ D+ W A++ YC+ G +
Sbjct: 172 R----------------------DVVAW------------------TAMLSGYCQAGRIT 191
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
AR +F E+P++NVVSW AMISG A NG L +L+E M + N+ ++ +L
Sbjct: 192 EARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYI 247
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGC--MVDVLGRSGCVREAYDLIRSMSIRPNAA 403
AG VE A ELF +M P C M+ G+ G V A + M R +
Sbjct: 248 QAGHVEDAAELFNAM-------PEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRER-DDG 299
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELI 429
W +++ + + + A +E++
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREML 325
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 140/299 (46%), Gaps = 24/299 (8%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y G + D +++F +M R+ + +++ G G V++ LF EM +R VV+W M+
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAML 181
Query: 205 SSLGKSGRDSEALRLFHEMRD--------------QAFELDEA-TVVAVLP-------IC 242
S ++GR +EA LF EM Q E++ A + V+P
Sbjct: 182 SGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTA 241
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G + G + + + V+ NA++ + + G++D A+ VF+++ ++ +W
Sbjct: 242 MLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTW 301
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI N + + +M+ +GV PN + + +LT CA +++ RE+ A+M
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
S ++ ++ + + G + +A + + + + +W S+++ HG E A
Sbjct: 362 C-SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHGLGEQA 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+ Y + + D A +F+ +P +++ S+NA+ISGL+ R + + + +
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSL--RRQTLPDAAAALASIPFP 109
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH--YGCMVDVLGRSGCVREA 389
P+ +F +L GL+ A LF M P H Y ++ L +G V EA
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGRVNEA 162
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
L M R + W ++LS G + A E+ N ++ + + YA+
Sbjct: 163 RRLFDEMPDR-DVVAWTAMLSGYCQAGRITEARALFDEMPKR---NVVSWTAMISGYAQN 218
Query: 450 GRWDDAETLRMWMRENN 466
G + A L M E N
Sbjct: 219 GEVNLARKLFEVMPERN 235
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++HA LR ++ +++ CG L++ K ++F+ ++++NSMI Y+
Sbjct: 354 EVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK---RVFHTFEPKDIVMWNSMITGYA 410
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGF 131
+G E+ + +F ++ G+ PD T+ L AC G ++ G+ + + IR G
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E + + V+L G +++ + M
Sbjct: 471 EHYSCM----VDLLGRSGLVEEAFDLIKNM 496
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 246/442 (55%), Gaps = 41/442 (9%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY-SLNGPSEEPVKLFALLKNLG 95
LA + G L++ A ++F+ M +V+ + +++ A S +G +E ++ ++ G
Sbjct: 110 LASMYAKFGLLDD---ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDG 166
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+ YTF+ +L AC G L VH +++G +
Sbjct: 167 VAPNAYTFSSVLGACTTPGML---TAVHASTVKAGLDS---------------------- 201
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
DV VR+ +I + K GD+D G +F EM R +V WN +I+ +SG
Sbjct: 202 ---------DVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVG 252
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ LF M+D F ++ T+ +VL C + ++ G+ +H++ Y + + + NAL+
Sbjct: 253 AIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK---YDRDLILHNALL 309
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D YCKCG L+ A +F +P+++V+SW+ M+SGLA NG+ + +++ M ++GV+PN
Sbjct: 310 DMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHV 369
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T VGVL C+HAGLVE F SM L I P EH+ CMVD+LGR+G + EA + I
Sbjct: 370 TMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHG 429
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
MS+ P++ IW +LL +CR H + LA +A +E++ LEP + G VLLSN YA+ +W DA
Sbjct: 430 MSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDA 489
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
E MR+ ++K PG+S IE
Sbjct: 490 EKPWKAMRDRGMRKEPGRSWIE 511
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
LT +HA ++ L + + + L ++ ++F++M ++++NS+I ++
Sbjct: 187 LTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQ 246
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+G ++LF +K+ G ++ T +L+AC G+ L G+ VH +++ ++R +
Sbjct: 247 SGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLIL 304
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++D +F M RDVI + M+ G
Sbjct: 305 HNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSG---------------------- 342
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
L ++G+ EALR+F M+ Q + T+V VL C+ G V+ G W H +
Sbjct: 343 ---------LAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDG-W-HYF 391
Query: 258 AESSGLY--RKVVSVGNALVDFYCKCGILDTA 287
L+ + N +VD + G LD A
Sbjct: 392 RSMKRLFGIQPEREHHNCMVDLLGRAGKLDEA 423
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKV----VSVGNALVDFYCKCGILDT 286
D ++ ++ +C R G D G+ IH + E+ G + V N+L Y K G+LD
Sbjct: 63 DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122
Query: 287 ARNVFKEIPRKNVVSWNAMISGLA-FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A +F +P +NVV+W +++ LA +GR + + M GV+PN TF VL C
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182
Query: 346 HAGLV 350
G++
Sbjct: 183 TPGML 187
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 33/175 (18%)
Query: 20 QIHAHFLRHK--LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
Q+HAH L++ L N +L + CG+L + A +F++M V+ +++M+ +
Sbjct: 290 QVHAHVLKYDRDLILHNALLDMYCK-CGSLED---ADALFHRMPQRDVISWSTMVSGLAQ 345
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG S E +++F L+K+ G+ P+ T +L A C H ++ G+ F S+
Sbjct: 346 NGKSVEALRVFDLMKSQGVAPNHVTMVGVLFA-----------CSHAGLVEDGWHYFRSM 394
Query: 138 R--IGV----------VELYTSCGQMDDGMKVFDEMS--HRDVIVRNLMIHGFCK 178
+ G+ V+L G++D+ ++ MS VI R L+ G C+
Sbjct: 395 KRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLL--GACR 447
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 262/478 (54%), Gaps = 10/478 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L T T +HAH ++ + Q + V+V G +A ++F++M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 66 LLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ + S++ A + N + ++ + G+ PD++ F+ L+KAC +G + G+ VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I S + ++ +V++Y CG ++ VFD + ++ I M+ G+ K G ++
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE-LDEATVVAVLPICA 243
L LFR + +++ SW +IS +SG+ EA +F EMR + + LD + +++ CA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L A G+ +H + G + V + NAL+D Y KC + A+++F + ++VVSW
Sbjct: 250 NLAASIAGRQVHGLVIALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
++I G+A +G+ E + LY+ M++ GV PN+ TFVG++ C+H G VEK RELF SMT
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH----VE 419
+ I P+L+HY C++D+LGRSG + EA +LI +M P+ W +LLS+C+ G +
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A+H V +P Y+LLSNIYA W R + E V+K PG S +E
Sbjct: 429 IADHLVSSFKLKDP---STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 242/442 (54%), Gaps = 36/442 (8%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL-G 95
L F CG+ A +F++ V+ +N MI A+ G SE+ L + L
Sbjct: 152 LIQFYHNCGSFG---CACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDN 208
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ PDE T L+ AC +G+L G+ +H Y+ +D+ +
Sbjct: 209 LRPDEVTMVSLVPACAQLGNLERGKFLHS--------------------YSKELGLDENL 248
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+V N ++ +CK D++ +F +RE+ V+SW M+S L KSG E
Sbjct: 249 RV-----------NNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQE 297
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL LF +M+ ELDE T+V VL CA+ GA+D G++IH + + +V + ALV
Sbjct: 298 ALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLV-LETALV 356
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D Y KCG +D A VF+ + +NV +WNA+I GLA +G GE + L++QM + P+
Sbjct: 357 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 416
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF+ +L C+HAGLV++ +F +M I P +EHYGC+VD+L R+ V +A I +
Sbjct: 417 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 476
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I+ N+ +W +LL +CR+ GH +LAE + +I LEP + G YV+LSN+YA +WD A
Sbjct: 477 MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHA 536
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR M+ ++K+PG S IE
Sbjct: 537 LKLRKQMKNKGIEKTPGCSWIE 558
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 209/411 (50%), Gaps = 36/411 (8%)
Query: 11 GRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+ + H + H L + L S LI +S G LN YA K+F QM+NP + N+
Sbjct: 25 SKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLN---YARKLFTQMQNPDPFICNT 81
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
MI+ Y+ + E V L+ + G+ D YT+ +L AC +G +++G+ H E++++G
Sbjct: 82 MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +++ Y +CG VFDE + RDV+ N+MI+ KG +K L
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
EM + +R DE T+V+++P CA+LG ++
Sbjct: 202 EMTK-------------------------LDNLRP-----DEVTMVSLVPACAQLGNLER 231
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+++HSY++ GL + V NA++D YCKC +++A+ VF I K+V+SW +M+SGLA
Sbjct: 232 GKFLHSYSKELGLDEN-LRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLA 290
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G + + L+++M + ++ T VGVL+ CA G +++ + + + I +L
Sbjct: 291 KSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKF-EINCDL 349
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+VD+ + G + A + R M +R N W +L+ HGH E A
Sbjct: 350 VLETALVDMYAKCGSIDLALQVFRRMRVR-NVFTWNALIGGLAMHGHGEDA 399
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 251/517 (48%), Gaps = 69/517 (13%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVS-VCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
QIH L Q + ++ +C LN + + ++N + P + N++++++
Sbjct: 73 QFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSLYNHIEEPDAFMCNTIMRSF 132
Query: 76 -SLNGPSEEPVKLFALLKNLGIW--PDEYTFAPLLKACLGVGDLRVGQCVHGEII----- 127
++N P F K + W P+ YTF + K C +G LR GQ VH ++
Sbjct: 133 VNVNDPFG--ALRFYYEKMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFGFE 190
Query: 128 -----RSGFERF------------------------------GSIRIGVVEL-------- 144
R+ F RF G ++ G + L
Sbjct: 191 LDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWNSMIDGYVKNGELGLAREIFDEM 250
Query: 145 --------------YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
Y G M+ +FD+M RDV+ N MI GF + DV F
Sbjct: 251 YERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVSWNCMIDGFARIKDVSMAAKFFD 310
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
EM R+VVSWN+M++ + + S+ LR F M F DEA++V+VL CA L +D
Sbjct: 311 EMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDFVPDEASLVSVLTACAELKMLDQ 370
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
G+W+HSY + +G+ ++ + AL+ Y KCG +D AR VF ++P K+VVSWN+MI G
Sbjct: 371 GKWVHSYMKDNGIKPDML-LSTALLTMYAKCGAMDLAREVFDKMPEKSVVSWNSMIIGYG 429
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
+G G+ +E++ +M G PN ATF+ VL+ C+H+G+V F M + I P
Sbjct: 430 IHGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFDLMHRKYRIQPKP 489
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EHYGC+VD+LG++G + DL R +WG LLS+CR H E E K+LI
Sbjct: 490 EHYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLLSACRAHCISEPGEILAKQLIK 549
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
L P + Y+LLSN Y GRWDD E LRM ++ +
Sbjct: 550 LFPNHVVPYLLLSNTYVAEGRWDDVENLRMTLKNKTL 586
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 246/458 (53%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QI H + + + +S+ +K A ++F ++ +V+ +N+MI AY +
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ + F L GI P+ TF +L C L +G+ VH I+++G E +
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V ++ +CG D MS ++ LF +M +R +VS
Sbjct: 554 ALVSMFVNCG---------DLMSAKN----------------------LFNDMPKRDLVS 582
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +I+ + G++ A F M++ + D+ T +L CA A+ G+ +H+
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V+ VG L+ Y KCG ++ A VF ++P+KNV SW +MI+G A +GRG+ +
Sbjct: 643 EAAFDCDVL-VGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEAL 701
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
EL+ QM +GV P+ TFVG L+ CAHAGL+E+ F SM +I P +EHYGCMVD+
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEF-NIEPRMEHYGCMVDL 760
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + EA + I M + P++ +WG+LL +C+ H +VELAE A ++ + L+P ++G +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIYA G W + +R M + V K PGQS IE
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 41/380 (10%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG + + ATK+F+ + ++ + SMI + +G ++ LF ++ G+ PD+ F
Sbjct: 259 CGDIGD---ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
LL+AC L G+ VH + G++ + ++ +YT CG M+D ++VFD +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V+ MI GF + G +D EA F++M
Sbjct: 376 RNVVSWTAMIAGFAQHGRID-------------------------------EAFLFFNKM 404
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ E + T +++L C+ A+ GQ I + +G Y V AL+ Y KCG
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG-YGSDDRVRTALLSMYAKCGS 463
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L A VF++I ++NVV+WNAMI+ + + + + ++ ++ +G+ PN +TF +L
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 344 CAHAGLVEKAR--ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C + +E + GL S +L +V + G + A +L M R +
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLES---DLHVSNALVSMFVNCGDLMSAKNLFNDMPKR-D 579
Query: 402 AAIWGSLLSSCRTHGHVELA 421
W ++++ HG ++A
Sbjct: 580 LVSWNTIIAGFVQHGKNQVA 599
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 56/414 (13%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +IF+ MR V +N ++ Y +G EE KL + + PD+ TF +L AC
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
++ G+ ++ I+++G++ + ++ ++ CG + D KVFD + RD++ M
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + G R +A LF M ++ + D+
Sbjct: 284 ITGLARHG-------------------------------RFKQACNLFQRMEEEGVQPDK 312
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
V++L C A++ G+ +H+ + G + + VG A++ Y KCG ++ A VF
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ +NVVSW AMI+G A +GR + + +MI G+ PN+ TF+ +L C+ +++
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 353 ARELFASMTGLHSIVPNLEHYG-------CMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+++ H I YG ++ + + G +++A+ + +S + N W
Sbjct: 432 GQQIQD-----HIIEAG---YGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAW 482
Query: 406 GSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYA-----EGGRW 452
+++++ H + A + L+ ++P NS + + N+ E G+W
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLELGKW 535
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 52/362 (14%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+++ S G E +++ + + I T++ LL+ C+ +L G+ ++ I +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
SG + D+ + N +I+ + K G+ +
Sbjct: 139 SGVQP-------------------------------DIFMWNTLINMYAKCGNTISAKQI 167
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +MRE+ V SWNL++ + G EA +L +M + + D+ T V++L CA V
Sbjct: 168 FDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNV 227
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
D G+ +++ +G + + VG AL++ + KCG + A VF +P +++V+W +MI+G
Sbjct: 228 DKGRELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL----- 363
LA +GR + L+++M +GV P+K FV +L C H +E+ +++ A M +
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 364 ----HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+I+ G M D L E +DL++ N W ++++ HG ++
Sbjct: 347 IYVGTAILSMYTKCGSMEDAL-------EVFDLVKGR----NVVSWTAMIAGFAQHGRID 395
Query: 420 LA 421
A
Sbjct: 396 EA 397
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 242/458 (52%), Gaps = 35/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH+ + + + +L F+S+ +IK + +F + R P ++ +N+MI Y+ NG
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + LF L G T L+ G L + +HG ++S F S+
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVST 358
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+ +Y+ +++ K+FDE E+S+ S
Sbjct: 359 ALTTVYSKLNEIESARKLFDESP-------------------------------EKSLPS 387
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MIS ++G +A+ LF EM+ F + T+ +L CA+LGA+ +G+W+H
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S+ + + V AL+ Y KCG + AR +F + +KN V+WN MISG +G+G+ +
Sbjct: 448 STD-FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ +M+ G++P TF+ VL C+HAGLV++ E+F SM + P+++HY CMVD+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++ A I +MSI P +++W +LL +CR H LA ++L L+P N G +
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNI++ + A T+R ++ + K+PG +LIE
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 204/489 (41%), Gaps = 75/489 (15%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+HL Q HA + H +L L I YA IF ++ P V LFN +++ +
Sbjct: 34 SHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 76 SLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
S+N + +FA L K+ + P+ T+A + A G D R G+ +HG+ + G +
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +V++Y +++D KVFD M +D I+ N MI G+ K + + +FR++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-- 211
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ + LD T++ +LP A L + +G I
Sbjct: 212 ----------------------------INESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
HS A +G Y V + Y KCG + +F+E + ++V++NAMI G NG
Sbjct: 244 HSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL------------------------- 349
EL + L+++++ G +T V ++ H L
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTT 362
Query: 350 -------VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IR 399
+E AR+LF S +L + M+ ++G +A L R M
Sbjct: 363 VYSKLNEIESARKLFD-----ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAET 457
PN +LS+C G + L + V +L+ + S YV L +YA+ G +A
Sbjct: 418 PNPVTITCILSACAQLGALSLGKW-VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 458 LRMWMRENN 466
L M + N
Sbjct: 477 LFDLMTKKN 485
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 246/460 (53%), Gaps = 34/460 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HAH ++ + + + + A ++ ++M +V+ + +MI YS G
Sbjct: 31 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 90
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + LF + G P+E+TFA +L +C ++G+ +H +I++ FE +
Sbjct: 91 YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 150
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y G++ + +VFD + RD VVS
Sbjct: 151 SLLDMYAKAGKICEARRVFDGLPERD-------------------------------VVS 179
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+IS + G D EAL LF ++ + + T +VL + L A+D G+ +HS+
Sbjct: 180 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 239
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ L VV + N+L+D Y KCG L +R +F +P + V+SWNAM+ G + +G G V
Sbjct: 240 RAKLPFYVV-LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298
Query: 320 ELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS-IVPNLEHYGCMV 377
EL++ M + V P+ TF+ VL+ C+H G+ ++ E+F M P +EHYGC+V
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+ GR+G V EA++ I+ M P AAIWGSLL +CR H +V + E + L+ +E N+G
Sbjct: 359 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 418
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV+LSN+YA GRWDD T+R M+E V K PG+S IE
Sbjct: 419 NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIE 458
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLH-----QSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+L L G H Q+H+H LR KL Q++LI S CG+L Y+ +IF+
Sbjct: 218 VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI--DMYSKCGSLT---YSRRIFDS 272
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRV 118
M +V+ +N+M+ YS +G E V+LF L+K + PD TF +L C G
Sbjct: 273 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDR 332
Query: 119 GQCVHGEII--RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
G + E++ + GFE VV+L+ G++++ + +M
Sbjct: 333 GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 377
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 240/428 (56%), Gaps = 32/428 (7%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A ++F M + + + +M+ ++ NG E +++F ++ GI D+YTF +L A
Sbjct: 222 VEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTA 281
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C + L G+ +H IIR+ ++ + +V++Y+ C + VF
Sbjct: 282 CGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVF----------- 330
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
R M ++++SW +I G++G EA+R+F EM+ +
Sbjct: 331 --------------------RRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
D+ T+ +V+ CA L +++ G H A SGL ++V NALV Y KCG ++ A
Sbjct: 371 PDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMH-YITVSNALVTLYGKCGSIEDAHR 429
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F E+ + VSW A++SG A GR + ++L+E+M+AKGV P+ TF+GVL+ C+ AG
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
VEK R F SM H IVP +HY CM+D+ RSG ++EA + I+ M + P+A WG+LL
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S+CR G +E+ + A + L+ ++P N +YVLL +++A G+W++ LR MR+ VKK
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKK 609
Query: 470 SPGQSLIE 477
PG S I+
Sbjct: 610 EPGCSWIK 617
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 215/444 (48%), Gaps = 50/444 (11%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLK-NLGIWPDEYTFAPLLKACLGV 113
+F M ++ +N++I +S G + V+++ ALL+ + + P T + ++ A +
Sbjct: 94 LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153
Query: 114 GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
GD +G+ H +I+R GF + +V++Y + D + FDE+ ++V++ N MI
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G + V++ LF M +R ++W M++ ++G +SEAL +F MR Q +D+
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
T ++L C L A++ G+ IH+Y + Y V VG+ALVD Y KC + A VF+
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRT-RYDDNVFVGSALVDMYSKCRSIKLAETVFRR 332
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ KN++SW A+I G NG E V ++ +M G+ P+ T V++ CA+ +E+
Sbjct: 333 MTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEG 392
Query: 354 RELFASMTGLHSIVPNLEHY----GCMVDVLGRSGCVREAYDLIRSMS------------ 397
+ ++V L HY +V + G+ G + +A+ L MS
Sbjct: 393 AQFHCL-----ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVS 447
Query: 398 ----------------------IRPNAAIWGSLLSSCRTHGHVELAE---HAVKELINLE 432
++P+ + +LS+C G VE H++++ +
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV 507
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAE 456
P + +Y + ++Y+ G+ +AE
Sbjct: 508 PIDD-HYTCMIDLYSRSGKLKEAE 530
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 154/386 (39%), Gaps = 78/386 (20%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y G+ +VFD M H ++ N ++ + LF M +R +VS+N +I
Sbjct: 51 YGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVI 110
Query: 205 SSLGKSGRDSEALRLFHEM--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG 262
+ G ++A+R++ + D + T+ ++ + LG +G+ H G
Sbjct: 111 AGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLG 170
Query: 263 LYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV---------------------- 300
VG+ LVD Y K ++ A+ F E+ KNVV
Sbjct: 171 FGANAF-VGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLF 229
Query: 301 ---------SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+W M++G NG +E++ +M +G++ ++ TF +LT C +E
Sbjct: 230 EVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALE 289
Query: 352 KARELFA---------------SMTGLHS---------------IVPNLEHYGCMVDVLG 381
+ +++ A ++ ++S N+ + ++ G
Sbjct: 290 QGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYG 349
Query: 382 RSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG- 437
++GC EA + M I P+ GS++SSC +E E A + L SG
Sbjct: 350 QNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLE--EGAQFHCLALV---SGL 404
Query: 438 -NYVLLSN----IYAEGGRWDDAETL 458
+Y+ +SN +Y + G +DA L
Sbjct: 405 MHYITVSNALVTLYGKCGSIEDAHRL 430
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 258/502 (51%), Gaps = 36/502 (7%)
Query: 11 GRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
G +T QIH ++H + + + + ++ A +F + SV+ +N
Sbjct: 263 GLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNI 322
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV-------- 122
MI Y SE+ ++ F ++ G PD+ T+ +L AC+ GD++VG+ +
Sbjct: 323 MISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPS 382
Query: 123 ----------------HGEII----RSGFERFGSIRIGVVELYTSCGQMD--DGMKVFDE 160
HGE + + F+ R + + +SC ++ + K
Sbjct: 383 LISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHA 442
Query: 161 MSHR-----DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+S + DV V + +I+ + K G ++ ++F ++ E VV WN MI+ + + +
Sbjct: 443 VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQD 502
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
AL F MR F E + + CA+L ++ GQ IH+ G Y V VG++LV
Sbjct: 503 ALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDG-YVDNVFVGSSLV 561
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ YCKCG + AR F +P KN+V+WN MI G A NG G V LY+ MI+ G P+
Sbjct: 562 EMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDI 621
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TFV VLT C+H+ LV++ E+F+SM +VP L+HY C++D LGR G E ++ +
Sbjct: 622 TFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDT 681
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M + + +W +LSSCR H +V LA+ A +EL L P NS YVLL+N+Y+ GRWDDA
Sbjct: 682 MPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDA 741
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
+ +R M +N + K PG S E
Sbjct: 742 QVVRDLMSDNQIHKDPGYSRSE 763
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 211/460 (45%), Gaps = 67/460 (14%)
Query: 17 HLTQIHAHF--LRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
+T H F + HK + N IL+ F C + N ++YA ++F QM + + N++I
Sbjct: 55 QITSAHHVFDKIPHKNIFSYNAILSAF---CKS-NNLQYACRLFLQMPERNTVSLNTIIT 110
Query: 74 AYSLNGPSEEPVKLFALLKNL-GIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
NG + + + L+ + P TFA + AC G+ D+ G+ HG +++ GF+
Sbjct: 111 TMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFD 170
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ +YT CG +D +VF+ + + + M+ G + V +GL LFR M
Sbjct: 171 SNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLM 230
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR---LGAVD 249
+ + +D ++ +L ICA+ G D
Sbjct: 231 LRKGIC-------------------------------VDSVSLSTILVICAKGVSFGVCD 259
Query: 250 ---------IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
G+ IH+ A G R + + N+L+D Y K G +D+A NVF+ + + +VV
Sbjct: 260 DSRGLSTNAQGKQIHTLAVKHGFERD-LHLCNSLLDMYAKTGDMDSAENVFENLDKHSVV 318
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWN MISG E +E +++M G P+ T++ +LT C +G V+ R++F M
Sbjct: 319 SWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCM 378
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR---PNAAIWGSLLSSCRTHGH 417
+ P+L + ++ +S EA +L R M + P+ +LSSC G
Sbjct: 379 SS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGL 433
Query: 418 VELAE--HAVKELINLEPWNSGNYVLLS--NIYAEGGRWD 453
+E + HAV + + + YV S N+Y++ G+ +
Sbjct: 434 LEAGKQVHAVSQKLG---FYDDVYVASSLINVYSKCGKME 470
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSH 163
LL++C+ L + +H I R F F + +++LY+ C Q+ VFD++ H
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFR--FTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPH 68
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+++ N ++ FCK ++ LF +M ER+ VS N +I+++ K+G + +AL + M
Sbjct: 69 KNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLM 128
Query: 224 R-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
++ + T V C L V+ G+ H G + + V NAL+ Y KCG
Sbjct: 129 MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVG-FDSNIYVSNALLCMYTKCG 187
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+ + A VF+ I N V++ M+ GL+ + + G+EL+ M+ KG+ + + +L
Sbjct: 188 LNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILV 247
Query: 343 CCAHA---GLVEKARELFASMTG--------LHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
CA G+ + +R L + G H +L ++D+ ++G + A +
Sbjct: 248 ICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAEN 307
Query: 392 LIRSMSIRPNAAIWGSLLS 410
+ ++ + + W ++S
Sbjct: 308 VFENLD-KHSVVSWNIMIS 325
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 246/458 (53%), Gaps = 33/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QI H + + + +S+ +K A ++F ++ +V+ +N+MI AY +
Sbjct: 434 QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHE 493
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ + F L GI P+ TF +L C L +G+ VH I+++G E +
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSN 553
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V ++ +CG D MS ++ LF +M +R +VS
Sbjct: 554 ALVSMFVNCG---------DLMSAKN----------------------LFNDMPKRDLVS 582
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +I+ + G++ A F M++ + D+ T +L CA A+ G+ +H+
Sbjct: 583 WNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALIT 642
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ V+ VG L+ Y KCG ++ A VF ++P+KNV SW +MI+G A +GRG+ +
Sbjct: 643 EAAFDCDVL-VGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEAL 701
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
EL+ QM +GV P+ TFVG L+ CAHAGL+E+ F SM +I P +EHYGCMVD+
Sbjct: 702 ELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEF-NIEPRMEHYGCMVDL 760
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
GR+G + EA + I M + P++ +WG+LL +C+ H +VELAE A ++ + L+P ++G +
Sbjct: 761 FGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVF 820
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSNIYA G W + +R M + V K PGQS IE
Sbjct: 821 VILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 41/380 (10%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG + + ATK+F+ + ++ + SMI + +G ++ LF ++ G+ PD+ F
Sbjct: 259 CGDIGD---ATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAF 315
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
LL+AC L G+ VH + G++ + ++ +YT CG M+D ++VFD +
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKG 375
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V+ MI GF + G +D EA F++M
Sbjct: 376 RNVVSWTAMIAGFAQHGRID-------------------------------EAFLFFNKM 404
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ E + T +++L C+ A+ GQ I + +G Y V AL+ Y KCG
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAG-YGSDDRVRTALLSMYAKCGS 463
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
L A VF++I ++NVV+WNAMI+ + + + + ++ ++ +G+ PN +TF +L
Sbjct: 464 LKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNV 523
Query: 344 CAHAGLVEKAR--ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C + +E + GL S +L +V + G + A +L M R +
Sbjct: 524 CKSSDSLELGKWVHFLIMKAGLES---DLHVSNALVSMFVNCGDLMSAKNLFNDMPKR-D 579
Query: 402 AAIWGSLLSSCRTHGHVELA 421
W ++++ HG ++A
Sbjct: 580 LVSWNTIIAGFVQHGKNQVA 599
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 191/414 (46%), Gaps = 56/414 (13%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +IF+ MR V +N ++ Y +G EE KL + + PD+ TF +L AC
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACAD 223
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
++ G+ ++ I+++G++ + ++ ++ CG + D KVFD + RD++ M
Sbjct: 224 ARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSM 283
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G + G R +A LF M ++ + D+
Sbjct: 284 ITGLARHG-------------------------------RFKQACNLFQRMEEEGVQPDK 312
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
V++L C A++ G+ +H+ + G + + VG A++ Y KCG ++ A VF
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVG-WDTEIYVGTAILSMYTKCGSMEDALEVFD 371
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+ +NVVSW AMI+G A +GR + + +MI G+ PN+ TF+ +L C+ +++
Sbjct: 372 LVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKR 431
Query: 353 ARELFASMTGLHSIVPNLEHYG-------CMVDVLGRSGCVREAYDLIRSMSIRPNAAIW 405
+++ H I YG ++ + + G +++A+ + +S + N W
Sbjct: 432 GQQIQD-----HIIEAG---YGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAW 482
Query: 406 GSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYA-----EGGRW 452
+++++ H + A + L+ ++P NS + + N+ E G+W
Sbjct: 483 NAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVCKSSDSLELGKW 535
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 52/362 (14%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIR 128
N+++ S G E +++ + + I T++ LL+ C+ +L G+ ++ I +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 129 SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL 188
SG + D+ +RN +I+ + K G+ +
Sbjct: 139 SGVQP-------------------------------DIFMRNTLINMYAKCGNTISAKQI 167
Query: 189 FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAV 248
F +MRE+ V SWNL++ + G EA +L +M + + D+ T V++L CA V
Sbjct: 168 FDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNV 227
Query: 249 DIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISG 308
D G+ +++ +G + + VG AL++ + KCG + A VF +P +++V+W +MI+G
Sbjct: 228 DKGRELYNLILKAG-WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITG 286
Query: 309 LAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM------TG 362
LA +GR + L+++M +GV P+K FV +L C H +E+ +++ A M T
Sbjct: 287 LARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 363 LHSIVPNLEHY---GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
++ L Y G M D L E +DL++ N W ++++ HG ++
Sbjct: 347 IYVGTAILSMYTKCGSMEDAL-------EVFDLVKGR----NVVSWTAMIAGFAQHGRID 395
Query: 420 LA 421
A
Sbjct: 396 EA 397
>gi|15239985|ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g43790
gi|10177948|dbj|BAB11307.1| unnamed protein product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 260/487 (53%), Gaps = 52/487 (10%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
+ L L+ + +L QIHA + L L+ + + T+ + YA I Q+ NP
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKAC-LGVGDL 116
SV L+N++I + N S + F+L + + P+E+T+ L KA
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 117 RVGQCVHGEIIR----SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
R G+ +H +++ +RF ++ +V Y +CG++ +
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRF--VQAALVGFYANCGKLREARS---------------- 171
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS---GRDSEALRLFHEMRDQAFE 229
LF +RE + +WN ++++ S D E L LF M+ + E
Sbjct: 172 ---------------LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNE 216
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
L ++VA++ CA LG G W H Y + L VG +L+D Y KCG L AR
Sbjct: 217 L---SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF-VGTSLIDLYSKCGCLSFARK 272
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF E+ +++V +NAMI GLA +G G+ G+ELY+ +I++G+ P+ ATFV ++ C+H+GL
Sbjct: 273 VFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V++ ++F SM ++ I P +EHYGC+VD+LGRSG + EA + I+ M ++PNA +W S L
Sbjct: 333 VDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S +THG E E A+K L+ LE NSGNYVLLSNIYA RW D E R M+++ V K
Sbjct: 393 GSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNK 452
Query: 470 SPGQSLI 476
SPG S +
Sbjct: 453 SPGISTL 459
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 225/398 (56%), Gaps = 13/398 (3%)
Query: 88 FALLKNLGIWPDEYTFAPLLKACLGVGDL-----RVGQCVHGEIIRSGFERFGSIRIG-- 140
F+ ++ G+ P+ TF LL G GDL +G +HG + G +R + +G
Sbjct: 2 FSGMRLAGVEPNHITFIALLS---GWGDLLSGSEALGDLLHGYACKLGLDR-AHVMVGTA 57
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
++ +Y+ G+ VFD M ++ + N MI G+ + G VD + LF EM ER ++SW
Sbjct: 58 ILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISW 117
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
MI+ K G EAL F EM+ + D ++A L C LGA+ G WIH Y S
Sbjct: 118 TAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVS 177
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
++ V V N+L+D YC+CG ++ AR VF ++ ++ VVSWN++I G A NG +
Sbjct: 178 QD-FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLV 236
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
+ +M +G PN TF G L C H GLVE+ F SM + I P +EHYGC+VD+
Sbjct: 237 YFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLY 296
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG-HVELAEHAVKELINLEPWNSGNY 439
R+G + +A +++SM ++PN + GSLL++CRT G + LAE +K L +L + NY
Sbjct: 297 SRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNY 356
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+LSN+YA G+W+ A +R M+ +KK PG S IE
Sbjct: 357 VILSNMYAADGKWEGASKMRRKMKGLGLKKEPGFSSIE 394
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 34/317 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 98 QVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALA 157
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G +H ++ F+ + +++LY CG ++ +VFD+M R V+
Sbjct: 158 ACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVS 217
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G + L FR+M+E + F
Sbjct: 218 WNSVIVGFAANGHAHESLVYFRKMQE-------------------------------EGF 246
Query: 229 ELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ + T L C +G V+ G ++ S + ++ G LVD Y + G L+ A
Sbjct: 247 KPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYG-CLVDLYSRAGRLEDA 305
Query: 288 RNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
V + +P K N V ++++ G + E + ++ + + +V + A
Sbjct: 306 LKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAA 365
Query: 347 AGLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 366 DGKWEGASKMRRKMKGL 382
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 248/461 (53%), Gaps = 32/461 (6%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+ Q+HA + ++ + +C ++ A +FN+M + ++ MI +
Sbjct: 18 QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFV 77
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
NG E + F L G PD ++ ++KAC L +G+ +H ++++G
Sbjct: 78 KNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNF 137
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +V++Y CG +D+ + LF M ++
Sbjct: 138 VCSTLVDMYAKCGMIDNAKQ-------------------------------LFDRMPKKD 166
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V+ +MI+ + G+ +E+ LF +MR F D+ +V ++ CA+LGA++ + +H
Sbjct: 167 LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHD 226
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + Y V +G A++D Y KCG +D++R +F + +KNV+SW+AMI ++G+G
Sbjct: 227 YV-CARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGR 285
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL+ M+ G+ PN+ TF+ +L C+HAGLV+ +LF+ M+ + + P+++HY CM
Sbjct: 286 EALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCM 345
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + +A LI +M + + IW + L +CR H V+LAE A K L++L+ N
Sbjct: 346 VDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNP 405
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+Y+LLSNIYA GRW D +R M + +KK PG + IE
Sbjct: 406 GHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIE 446
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 254/483 (52%), Gaps = 46/483 (9%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLR--------HKLHQSNLILAHFVSVCGTLNEIKYATKI 56
+LRL + Q+HA LR H L +L+ H ++ ++YA +
Sbjct: 24 LLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAKHLLF-HLAALKAP--PLRYAVAV 80
Query: 57 FNQM-RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
+ + +P N++++ ++ S P AL + PD +T+ PLL+AC +
Sbjct: 81 LSGLLPSPDPFSLNTVLRIFA---SSARPRVALALHRRHLAPPDTHTYPPLLQACARLLA 137
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
LR G+ +H E ++G ++ +V LY +CG + +VFDE+
Sbjct: 138 LRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIP------------- 184
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
ER++VSWN +++ +GR +E L +F EM + F D TV
Sbjct: 185 ----------------PPERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFAPDGFTV 228
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V+VL CA +G + +G+ +H + GL GNAL+D Y KCG +D AR +F E+
Sbjct: 229 VSVLTACAEIGVLALGRRVHVFVAKVGLVGNA-HAGNALIDLYAKCGGVDDARKMFGEMG 287
Query: 296 -RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+ VVSW ++I GLA NG G ++L+ M + + P + T VGVL C+H GLV+
Sbjct: 288 VGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGF 347
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F M + I P +EH GCMVD+LGR+G V EA++ I +M + PNA +W +LL +C
Sbjct: 348 RYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLEPNAVVWRTLLGACAM 407
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
H +E+ E A L+ L+P +SG+YVLLSN+YA GRW D LR M + V+K+PG S
Sbjct: 408 HKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHS 467
Query: 475 LIE 477
L+E
Sbjct: 468 LVE 470
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 252/471 (53%), Gaps = 39/471 (8%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
++ GR HL + +HFL + L N+I+ + CG L++ A ++F++M ++
Sbjct: 102 KVEQGRIVHAHL--VDSHFLDNHLVLQNIIVNMYAK-CGCLDD---ARRMFDEMPTKDMV 155
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ ++I +S N + + LF + LG P+ +T + LLKA L G +H
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
++ G++ + +V++Y CG MD FD M
Sbjct: 216 LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP------------------------ 251
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+S VSWN +IS + G AL L +M+ + F+ T +VL CA +G
Sbjct: 252 -------TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIG 304
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A++ G+W+H++ SGL + + +GN L+D Y K G +D A+ VF + + +VVSWN M+
Sbjct: 305 ALEQGKWVHAHMIKSGL-KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+G A +G G+ ++ +EQM+ G+ PN+ +F+ VLT C+H+GL+++ F M + +
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P++ HY VD+LGR G + A IR M I P AA+WG+LL +CR H ++EL +A +
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P +SG +LLSNIYA GRW D +R M+E+ VKK P S +E
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 162/332 (48%), Gaps = 43/332 (12%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGSIRIGVVELYTSC 148
L++ + PD ++ LLK C +G + G+ VH ++ S F + ++ +V +Y C
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G +DD ++FDEM +D++ +I GF
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGF-------------------------------S 165
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ R +AL LF +M F+ + T+ ++L +D G +H++ G Y+ V
Sbjct: 166 QNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG-YQSSV 224
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VG+ALVD Y +CG +D A+ F +P K+ VSWNA+ISG A G GE + L +M K
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSI--VPNLEHYGCMVDVLGRSG 384
P T+ VL+ CA G +E+ + + A M +GL I + N ++D+ ++G
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN-----TLLDMYAKAG 339
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ +A + + ++P+ W ++L+ C HG
Sbjct: 340 SIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+L C RLG V+ G+ +H++ S + + N +V+ Y KCG LD AR +F E+P K
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL- 356
++V+W A+I+G + N R + L+ QM+ G PN T +L ++ +L
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 357 -FASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F G S V + G +VD+ R G + A M + + W +L+S
Sbjct: 213 AFCLKYGYQSSV----YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHAR 267
Query: 415 HGHVELAEHAVKEL--INLEPWNSGNYVLLSNIYA----EGGRWDDAETLR 459
G E A H + ++ N +P + +LS + E G+W A ++
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIK 318
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 249/458 (54%), Gaps = 37/458 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H H + H + +++ N ++ A +F++M +V+ + +MI AYS
Sbjct: 306 RVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQ 365
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
++ ++L A + G+ P+ +TF+ +L+AC + DL+ +H I++ G E
Sbjct: 366 LNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ---LHSWIMKVGLES------ 416
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
DV VR+ +I + K G++ + L +FREM V
Sbjct: 417 -------------------------DVFVRSALIDVYSKMGELLEALKVFREMMTGDSVV 451
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN +I++ + EAL L+ MR F D++T+ +VL C L +++G+ H +
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + + + NAL+D YCKCG L+ A+ +F + +K+V+SW+ MI+GLA NG +
Sbjct: 512 K---FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEAL 568
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
L+E M +G PN T +GVL C+HAGLV + F SM L+ I P EHYGCM+D+
Sbjct: 569 NLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDL 628
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+ + + LI M+ P+ W +LL +CR +V+LA +A KE++ L+P ++G Y
Sbjct: 629 LGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAY 688
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNIYA RW+D +R M++ ++K PG S IE
Sbjct: 689 VLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIE 726
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 33/236 (13%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q+H+ ++ L + + + V + E+ A K+F +M +++NS+I A++
Sbjct: 402 LKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQ 461
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ +E + L+ ++ +G D+ T +L+AC + L +G+ H +++ F++ +
Sbjct: 462 HSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLIL 519
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++++Y CG ++D +F+ M+ +DVI + MI G
Sbjct: 520 NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAG---------------------- 557
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQW 253
L ++G EAL LF M+ Q + + T++ VL C+ G V+ G +
Sbjct: 558 ---------LAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWY 604
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ + M + D T ++ C GAV G+ +H + S+G + K + N L+
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTF-LTNILI 327
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ Y K +L+ A+ +F ++P +NVVSW MIS + + + L M GV PN
Sbjct: 328 NMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIV------PNLEHYGCMVDVLGRSGCVREA 389
TF VL C E + LHS + ++ ++DV + G + EA
Sbjct: 388 TFSSVLRAC----------ERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEA 437
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+ R M + ++ +W S++++ H + A H K +
Sbjct: 438 LKVFREM-MTGDSVVWNSIIAAFAQHSDGDEALHLYKSM 475
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 252/463 (54%), Gaps = 39/463 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+ ++H H + L + + FV + CG++++ A IF+++ +V +N+MI
Sbjct: 354 VKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD---AQLIFDKLAVRNVTTWNAMIGG 410
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ E + LF ++ G +PD TF +L A +G L + VH I +G
Sbjct: 411 VAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL--- 467
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
D+ V N ++H + K G+ +F +M E
Sbjct: 468 -----------------------------VDLRVGNALVHMYAKCGNTMYAKQVFDDMVE 498
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
R+V +W +MIS L + G EA LF +M + D T V++L CA GA++ + +
Sbjct: 499 RNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 558
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
HS+A ++GL + VGNALV Y KCG +D AR VF ++ ++V SW MI GLA +GR
Sbjct: 559 HSHAVNAGLVSDL-RVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGR 617
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G ++L+ +M +G PN +FV VL+ C+HAGLV++ R F S+T + I P +EHY
Sbjct: 618 GLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYT 677
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGR+G + EA I +M I P A WG+LL +C T+G++E+AE A KE + L+P
Sbjct: 678 CMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPK 737
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++ YVLLSNIYA G W+ +R M+ ++K PG+S IE
Sbjct: 738 SASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIE 780
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 185/400 (46%), Gaps = 50/400 (12%)
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
MI Y+ G +E+ +K+++ ++ G P+E T+ +LKAC L+ G+ +H II+SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F+ + +V +Y CG +DD +FD+M R+VI
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVI----------------------- 97
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
SW +MI L GR EA F +M+ + F + T V++L A GA++
Sbjct: 98 --------SWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
+ +HS+A ++GL + VGNALV Y K G +D AR VF + +++ SW MI GLA
Sbjct: 150 VKEVHSHAVNAGLALD-LRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLA 208
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA--HAGLVEKARELFASMTGLHSIVP 368
+GRG+ L+ QM G PN T++ +L A G +E +E+ G +
Sbjct: 209 QHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVH-KHAGKAGFIS 267
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP----NAAIWGSLLSSCRTHGHVELAEHA 424
+L ++ + + G + +A + M R NA I G + C GH
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGC---GHEAFTIFL 324
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
+ P +S Y+ L N + G W+ W++E
Sbjct: 325 KMQQEGFVP-DSTTYLSLLNTHVSTGAWE-------WVKE 356
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 205/473 (43%), Gaps = 84/473 (17%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H + G++++ A +F+ M + + MI + +G +E LF ++ G
Sbjct: 172 LVHMYAKSGSIDD---ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC 228
Query: 97 WPDEYTFAPLLKAC--LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDG 154
P+ T+ +L A G L + VH ++GF +R+G
Sbjct: 229 LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGF--ISDLRVG-------------- 272
Query: 155 MKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS 214
N +IH + K G +D +F M +R V+SWN MI L ++G
Sbjct: 273 ---------------NALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGH 317
Query: 215 EALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
EA +F +M+ + F D T +++L GA + + +H +A GL + VG+A
Sbjct: 318 EAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL-RVGSAF 376
Query: 275 VDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNK 334
V Y +CG +D A+ +F ++ +NV +WNAMI G+A G + L+ QM +G P+
Sbjct: 377 VHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDA 436
Query: 335 ATFVGVLTC----------------CAHAGLVE------------------KARELFASM 360
TFV +L+ AGLV+ A+++F M
Sbjct: 437 TTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDM 496
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGH 417
+ N+ + M+ L + GC EA+ L M I P+A + S+LS+C + G
Sbjct: 497 -----VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGA 551
Query: 418 VELAEHAVKELIN---LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
+E + +N + GN L ++YA+ G DDA + M E +V
Sbjct: 552 LEWVKEVHSHAVNAGLVSDLRVGN--ALVHMYAKCGSVDDARRVFDDMLERDV 602
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 178/395 (45%), Gaps = 42/395 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
+IHAH ++ + V++ CG++++ A IF++M +V+ + MI +
Sbjct: 51 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIDD---AQLIFDKMVERNVISWTVMIGGLA 107
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G +E F ++ G P+ YT+ +L A G L + VH + +G
Sbjct: 108 HYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL--- 164
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
D+ V N ++H + K G +D +F M ER
Sbjct: 165 ----------------------------DLRVGNALVHMYAKSGSIDDARVVFDGMVERD 196
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA--RLGAVDIGQWI 254
+ SW +MI L + GR EA LF +M + T +++L A GA++ + +
Sbjct: 197 IFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEV 256
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H +A +G + VGNAL+ Y KCG +D AR VF + ++V+SWNAMI GLA NG
Sbjct: 257 HKHAGKAGFISDL-RVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGC 315
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
G ++ +M +G P+ T++ +L G E +E+ + +V +L
Sbjct: 316 GHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV-GLVSDLRVGS 374
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V + R G + +A + +++R N W +++
Sbjct: 375 AFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMI 408
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 247/429 (57%), Gaps = 8/429 (1%)
Query: 52 YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL 111
YA +F+ + NPS FN++I+ ++L + LF+ L+ L + PD +TF +LKA
Sbjct: 61 YALSLFHSIPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASA 120
Query: 112 GVGDLRVGQCVHGEIIRSGF--ERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
+ L + Q +H + ++ G + F + IGV Y+ +++D K+F E H DV+
Sbjct: 121 QLHSLSLAQSLHSQALKFGLLPDLFSLNTLIGV---YSIHHRVNDAHKLFYECPHGDVVS 177
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +IHG K + + LF EM R +SW MI+ ++A+ LF+EM
Sbjct: 178 YNALIHGLVKTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEV 237
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D +V+VL CA+LG ++ G +H Y + + + R + LVD Y KCG ++TAR
Sbjct: 238 KPDNIALVSVLSACAQLGELEQGSIVHDYIKRNRI-RVDSYLATGLVDLYAKCGCVETAR 296
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAG 348
+VF+ K V +WNAM+ G A +G G + +E + +M+++GV P+ T +GVL C+HAG
Sbjct: 297 DVFESCMEKYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAG 356
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
LV +AR +F M ++ + +HYGCM D+L R+G + E +++++M + WG L
Sbjct: 357 LVLEARRIFDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGL 416
Query: 409 LSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN-V 467
L CR HG+VE+A+ A ++++ ++P + G Y +++NIYA +WDD +R + N
Sbjct: 417 LGGCRIHGNVEVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRA 476
Query: 468 KKSPGQSLI 476
KK G+SLI
Sbjct: 477 KKITGRSLI 485
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 166/503 (33%), Positives = 257/503 (51%), Gaps = 78/503 (15%)
Query: 50 IKYATKIFNQMRNPS---VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
+ Y+ IF+QM + S ++++N+MI+ Y+ NGP +E +++F + G+ P +T+ +
Sbjct: 1 MDYSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYV 60
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFER--------------------------------- 133
+ +C + G+ VH EI++SGFE
Sbjct: 61 INSCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYAR 120
Query: 134 --FGSIRIGVVEL-------YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD- 183
F + + VEL Y + G + ++FD M RD++ N MI G+ K G V
Sbjct: 121 KIFDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVAN 180
Query: 184 -KGLY-----------------------------LFREMRERSVVSWNLMISSLGKSGRD 213
+GL+ F M +R+VVSWN MISS K G+
Sbjct: 181 ARGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKF 240
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
E+L LF +M+ + D T V+VL C+ LG ++ G++IH S L + V VG A
Sbjct: 241 VESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYL--SGDLSQSEVMVGTA 298
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L + Y +CG +D A VF +I +++V WN +I LA +GR E ++++ M G+ PN
Sbjct: 299 LTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPN 358
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
TF L C+H GLVE+ +F SM + I+P + HYGC++D+L R+G + EA L+
Sbjct: 359 DFTFTSALFACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLV 418
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
M +P+ AIWG+LL CR G ++LAE V++ +E SG YVLLSNI+A G+W
Sbjct: 419 EDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWI 478
Query: 454 DAETLRMWMRENNVKKSPGQSLI 476
+A R M E + K G S++
Sbjct: 479 EAADARKKMDEKKISKKTGSSVV 501
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 42/309 (13%)
Query: 22 HAHFLRHKLHQSNLI-LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+A L K+ + N+I + ++++ A F M +V+ +NSMI +Y+ +G
Sbjct: 180 NARGLFEKMPEKNVISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGK 239
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH---GEIIRSGFERFGSI 137
E + LF +++ G+ PD YTF +L AC +GDL G+ +H G++ +S +
Sbjct: 240 FVESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEV----MV 295
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
+ E+Y CG +D VF ++ RDV FC
Sbjct: 296 GTALTEMYAQCGDVDKAFAVFIKIGKRDV---------FC-------------------- 326
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI-HS 256
WN++I +L GR EA+++F MR + ++ T + L C+ G V+ G I +S
Sbjct: 327 --WNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHIIFNS 384
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRG 315
+ + K+ G L+D C+ G L+ A + +++P + +V W A++ G G
Sbjct: 385 MEKDYKIIPKITHYG-CLIDMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTGDL 443
Query: 316 ELGVELYEQ 324
+L ++ E+
Sbjct: 444 KLAEKVVEK 452
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 44/253 (17%)
Query: 22 HAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+ H+L L QS ++ L + CG +++ A +F ++ V +N +IKA +L
Sbjct: 280 YIHYLSGDLSQSEVMVGTALTEMYAQCGDVDK---AFAVFIKIGKRDVFCWNVIIKALAL 336
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+G SEE +K+F L++ G+ P+++TF L A C HG ++ G F S
Sbjct: 337 HGRSEEAIKIFLLMRKTGLKPNDFTFTSALFA-----------CSHGGLVEEGHIIFNS- 384
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR-ERS 196
M+ K+ +++H ++ L C+ G +++ + L +M +
Sbjct: 385 -------------MEKDYKIIPKITHYGCLIDML-----CRNGQLEEAMLLVEDMPFQPD 426
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
V W ++ +G L+L ++ ++A E+ E V + + + A GQWI +
Sbjct: 427 VAIWGALLGGCRVTGD----LKLAEKVVEKATEM-ETNESGVYVLLSNIHA-SAGQWIEA 480
Query: 257 YAESSGLYRKVVS 269
+ K +S
Sbjct: 481 ADARKKMDEKKIS 493
>gi|357131027|ref|XP_003567145.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 487
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 166/477 (34%), Positives = 248/477 (51%), Gaps = 42/477 (8%)
Query: 5 ILRLLHGRNTRTH---LTQIHAHFLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+ R LH NT T L + LR L +S +++ F CG L + A +F +
Sbjct: 20 VTRTLHAINTCTSVAALAPLRGAILREPALLRSTAVVSAFFLACGRLRHLDPALSLFASL 79
Query: 61 RNPSVLLFNSMIKAYSLNGPS-EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
P V +FNS+++ SL+ S P+ LF LG+ P+ YTF LL + + DLR
Sbjct: 80 SRPHVFVFNSILR--SLHPASGSSPLPLFRRFLCLGVRPNRYTFPLLLTSLSSLCDLRA- 136
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VH ++ +SGF R +R ++ Y +C
Sbjct: 137 --VHSQVTKSGFARDLHVRNALLARYAACDP----------------------------- 165
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
DV LF EM VV+W +I+S GR +AL F M + + T+VA L
Sbjct: 166 -DVAHAEQLFDEMALPDVVAWTTVITSYKNRGRSFQALATFRRMLAASVAPNRVTMVAAL 224
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C GA++ G WIH Y E G VV +G ALVD Y KCG + A +F E+ +NV
Sbjct: 225 GACGAHGAIESGTWIHEYVEKQGWDLDVV-LGTALVDMYGKCGHVAEAARLFTEMVERNV 283
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+WNA+I L ++ + +M A GV P+ T + L CAHAG V+ R++F
Sbjct: 284 YTWNAIIGALVLAQDSTRALQWFYRMEADGVQPDAVTLICALCACAHAGFVDTGRKIFNL 343
Query: 360 MT-GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+ G + P ++H+GC+VD+L RSG + +A+ ++++M +P+A IWG LL C+ HG
Sbjct: 344 IAQGEYGFQPGVKHFGCLVDLLSRSGHLDDAFTVVQTMPSQPSAVIWGLLLRGCKAHGDS 403
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
L+EH + L+ LEP N+ +YVLLSN+YAE GRW +AE + +WM++N ++K G S+
Sbjct: 404 SLSEHVLTRLVELEPENASHYVLLSNLYAETGRWQEAEEVLLWMKKNGLRKDAGWSV 460
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
T IH + + ++ V + G + A ++F +M +V +N++I A L
Sbjct: 237 TWIHEYVEKQGWDLDVVLGTALVDMYGKCGHVAEAARLFTEMVERNVYTWNAIIGALVLA 296
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI------IRSGFE 132
S ++ F ++ G+ PD T L AC G + G+ + I + G +
Sbjct: 297 QDSTRALQWFYRMEADGVQPDAVTLICALCACAHAGFVDTGRKIFNLIAQGEYGFQPGVK 356
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEM-SHRDVIVRNLMIHGFCKKGDVDKGLYLFR- 190
FG + V+L + G +DD V M S ++ L++ G GD ++
Sbjct: 357 HFGCL----VDLLSRSGHLDDAFTVVQTMPSQPSAVIWGLLLRGCKAHGDSSLSEHVLTR 412
Query: 191 --EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
E+ + + L+ + ++GR EA + M+ D V +L
Sbjct: 413 LVELEPENASHYVLLSNLYAETGRWQEAEEVLLWMKKNGLRKDAGWSVRIL 463
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 249/467 (53%), Gaps = 43/467 (9%)
Query: 20 QIHAHFLR-------HKLHQSNLILAHFVSVCGTLNEIKYATKIFN-QMRNPSVLLFNSM 71
QIHA LR H L +L+ H S+ + YA + + + +P N++
Sbjct: 36 QIHARALRAAGVPLSHPLLAKHLLF-HLASLRAGPPPLLYAVTVLSCLLPDPDPFSLNTV 94
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
++ + S P AL + PD +T+ PLL+AC + LR G+ +H E ++G
Sbjct: 95 LR---IAASSAHPRIALALHRRRLAPPDTHTYPPLLQACTRLLALREGESLHAEAAKNGL 151
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ +V Y +CG + +VFDE+
Sbjct: 152 VALVFVKNSLVHHYGACGLFESAHRVFDEIP----------------------------- 182
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
+ ER++VSWN +++ +GR +E L +F E + D T+V+VL CA +GA+ +G
Sbjct: 183 VLERNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLG 242
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLA 310
+ +H +A GL VGNAL+D Y KCG ++ A VF+E+ + VVSW ++I GLA
Sbjct: 243 RRVHVFASKVGLVGNS-HVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLA 301
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG G+ +EL+ M + + P T VGVL C+H GLV+ F M + I P +
Sbjct: 302 GNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGI 361
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
EH GCMVD+LGR+G V EA++ I +M + PNA +W +LL +C H +EL E A L+
Sbjct: 362 EHLGCMVDLLGRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVE 421
Query: 431 LEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P +SG+YVLLSN+YA GRW DA LR M + V+K+PG SL+E
Sbjct: 422 LDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVE 468
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 243/462 (52%), Gaps = 5/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IHA + + ++ +++ G A ++F++M+ ++ +N MI Y NG
Sbjct: 228 KIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNG 287
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E ++L+ L G + TF +L AC V L G+ VH I+ G + ++
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG---DVDKGLYLFREMRERS 196
+V +Y CG +++ KVF+ M +RD + + +I + G D K +F + R
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIH 255
+ WN MI++ ++G A+++F EM A + D T +AVL CA LG + + +H
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ S L VV V N L++ Y +CG L+ A +F K VVSW AM++ + GR
Sbjct: 468 AQISESELESNVV-VTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRY 526
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+++M +GV P+ T+ +L C H G +E+ F M LH + P +H+
Sbjct: 527 AEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAA 586
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGRSG + +A +L+ SM P+ W + L++CR HG +EL E A + + L+P +
Sbjct: 587 MVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSS 646
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ Y+ +SNIYA G W+ ++R M E +KK PG S IE
Sbjct: 647 TAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIE 688
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 127/580 (21%), Positives = 226/580 (38%), Gaps = 147/580 (25%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--RNPSVLLFNSMIKAYSLN 78
+H + + ++ +S+ G + + A +F M R +V+ +N+MI AY+ N
Sbjct: 29 LHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQN 88
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
G S E + L+ + G+ D TF +L AC L G+ +H + SG + F S+
Sbjct: 89 GHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLA 145
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----- 193
+V +Y G + D ++F + RD N +I + GD L +F+EM+
Sbjct: 146 NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCDMKP 205
Query: 194 ---------------------------------ERSVVSWNLMISSLGKSGRDSEALRLF 220
+ +V +I+ GK G EA +F
Sbjct: 206 NSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVF 265
Query: 221 HEMRD-------------------------------QAFELDEATVVAVLPICARLGAVD 249
+M+ + F+ +AT V++L C+ + A+
Sbjct: 266 DKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALA 325
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+ +HS+ GL + V+V ALV+ Y KCG L+ AR VF + ++ V+W+ +I
Sbjct: 326 QGRLVHSHILERGLDSE-VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAY 384
Query: 310 AFNGRGE----------------------------------LGVELYEQMI-AKGVSPNK 334
A NG G+ ++++ +M A G+ P+
Sbjct: 385 ASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDA 444
Query: 335 ATFVGVLTCCAHAGLVEKARELFA---------------SMTGLHSIVPNLEH------- 372
TF+ VL CA G + + + L A ++ +++ +LE
Sbjct: 445 VTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504
Query: 373 --------YGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELA 421
+ MV + G EA DL + M ++P+ + S+L C G +E
Sbjct: 505 AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQG 564
Query: 422 EH---AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+ EL L P + ++ + ++ GR DA+ L
Sbjct: 565 WRYFTDMAELHGLAP-TADHFAAMVDLLGRSGRLFDAKEL 603
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 35/302 (11%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
PD TF +L +C GD+ G+ +H I S FER + ++ +Y C + D V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEAL 217
F+ M + R+R+VVSWN MI++ ++G +EAL
Sbjct: 65 FESM-----------------------------DWRQRNVVSWNAMIAAYAQNGHSTEAL 95
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
L+ M Q D T V+VL C+ L G+ IH+ SGL S+ NALV
Sbjct: 96 VLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGL-DSFQSLANALVTM 151
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y + G + A+ +F+ + ++ SWNA+I + +G + ++++M + PN T+
Sbjct: 152 YARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTY 210
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
+ V++ + ++ + R++ A + + +L ++++ G+ G EA ++ M
Sbjct: 211 INVISGFSTPEVLPEGRKIHAEIVA-NGFDSDLVVATALINMYGKCGSSHEAREVFDKMK 269
Query: 398 IR 399
R
Sbjct: 270 KR 271
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 251/432 (58%), Gaps = 3/432 (0%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L + A K+F++M + +++L+N M++ Y G V L ++ G+ PD T
Sbjct: 97 LGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTA 156
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
+ AC DL +G+ +H + + F + ++++YT +++ +K+F++M R++
Sbjct: 157 VTACSRARDLSLGRRIH-VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNI 215
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I +++ G+ G +DK LF + +E+ ++ W MI++ + G EAL LF +M+ Q
Sbjct: 216 ISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQ 275
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
E D TVV +L CA LGA+D G+WIH YAE + V +G AL+D Y KCG ++
Sbjct: 276 RVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAV-LGTALIDMYSKCGHIEK 334
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
+ VF + ++ +W A+I GLA NG+ +EL++ M V P+ TF+GVL+ C H
Sbjct: 335 SLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCH 394
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA-AIW 405
GLV++ R+ F +M ++ I P +EHY C+V++LGR+G + EA LI + I +A ++
Sbjct: 395 GGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLF 454
Query: 406 GSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMREN 465
G+LL++C+ HG+VE++E K + + + +L+SN+YA RW+D +R M
Sbjct: 455 GALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHP 514
Query: 466 NVKKSPGQSLIE 477
VKK+ G SLIE
Sbjct: 515 TVKKNAGCSLIE 526
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 189/460 (41%), Gaps = 107/460 (23%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-GQCVHGEII 127
N +I+ + G + ++ L+ G+ D +T+ +L+A +GV L V G+ H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRA-VGVLKLSVEGRKAHAAAV 76
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++GF ++E+YT G++D KVFDEM R
Sbjct: 77 KTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSR----------------------- 113
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
++V WN+M+ + G S A+ L +M D T+V + C+R
Sbjct: 114 --------ALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARD 165
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+ IH Y ++ ++ + V NAL+D Y K L+ A +F+++P +N++SW ++S
Sbjct: 166 LSLGRRIHVYMDN--VFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVS 223
Query: 308 GLAFNGR-------------------------------GELGVELYEQMIAKGVSPNKAT 336
G G+ E + L+ M + V P++ T
Sbjct: 224 GYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFT 283
Query: 337 FVGVLTCCAHAGL-----------------------------------VEKARELFASMT 361
V +LTCCA+ G +EK+ E+F M
Sbjct: 284 VVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQ 343
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
G + C + G++G E + ++ ++P+ + +LS+C G V+
Sbjct: 344 GRDATA--WTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 422 E---HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
HA++E+ +EP +Y L N+ G D+AE L
Sbjct: 402 RKQFHAMREVYQIEP-RVEHYSCLVNLLGRAGLLDEAERL 440
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/460 (33%), Positives = 244/460 (53%), Gaps = 34/460 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL--LFNSMIKAYSL 77
Q+H H +R +L +S+ ++ A K+F + + S L +N++I Y+
Sbjct: 71 QLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTA 130
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
N + +F +K G+ D T L+ C L +G+ +HGE ++ G
Sbjct: 131 NSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGG------- 183
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ +V V N I + K G V+ G LF EM + +
Sbjct: 184 ------------------------TYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGL 219
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
++WN +IS ++G + L LF +M+ D T+V+VL CA LGA IGQ +
Sbjct: 220 ITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGEL 279
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
E++G V + NAL+ Y +CG L AR VF +P K++VSW AMI +G GE
Sbjct: 280 VEANGFAPNVF-LSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGET 338
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
G+ L++ MI +G+ P+ A FV VL+ C+H+GL +K ELF +M + + P EHY C+V
Sbjct: 339 GLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 398
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + EA + I SM + P+ A+WG+LL +C+ H +V++AE A ++I EP N G
Sbjct: 399 DLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIG 458
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVL+SNIY++ + +R+ MRE +K PG S +E
Sbjct: 459 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 498
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 150/426 (35%), Positives = 231/426 (54%), Gaps = 32/426 (7%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F+++ V+ +N+MI Y +G EE + F ++ + P++ T +L AC
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSAC-- 273
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
G R G + + D+G ++ + N +
Sbjct: 274 ----------------------GHTRSGELGKWIGSWVRDNGFG-------SNLQLTNAL 304
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I +CK G+ D LF + E+ V+SWN MI EAL LF M + ++
Sbjct: 305 IDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPND 364
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T + +L CA LGA+D+G+W+H+Y + + S+ +L+D Y KCG ++ A VF+
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV-SPNKATFVGVLTCCAHAGLVE 351
+ +N+ SWNAM+SG A +G E + L+ +M+ KG+ P+ TFVGVL+ C AGLV+
Sbjct: 425 SMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVD 484
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SM + I P L+HYGCM+D+L R+ EA L+++M + P+ AIWGSLLS+
Sbjct: 485 LGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSA 544
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
C+ HG VE E+ + L LEP N+G +VLLSNIYA GRWDD +R + + +KK P
Sbjct: 545 CKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVP 604
Query: 472 GQSLIE 477
G + IE
Sbjct: 605 GCTSIE 610
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 222/435 (51%), Gaps = 9/435 (2%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIF- 57
+ L LL QIH+ ++ L+ + + L HF +V + ++ YA +F
Sbjct: 28 QHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPS-GDLSYALSLFE 86
Query: 58 --NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
Q +V ++NS+I+ YSL+ + LF+ + G+ P+ +TF L K+C
Sbjct: 87 ENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKA 146
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHG 175
G+ +H ++ + V+ +Y S G+MD VFD+ S RD + +I G
Sbjct: 147 THEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITG 206
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ +G +D LF E+ + VVSWN MIS +SGR EA+ F+EM++ +++T+
Sbjct: 207 YVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTM 266
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V VL C + ++G+WI S+ +G + + + NAL+D YCKCG D AR +F I
Sbjct: 267 VVVLSACGHTRSGELGKWIGSWVRDNG-FGSNLQLTNALIDMYCKCGETDIARELFDGIE 325
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
K+V+SWN MI G ++ E + L+E M+ V PN TF+G+L CA G ++ +
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
+ A + N + ++D+ + GC+ A + RSM R N A W ++LS H
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMH 444
Query: 416 GHVELAEHAVKELIN 430
GH E A E++N
Sbjct: 445 GHAERALALFSEMVN 459
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 21 IHAHFLRHKLHQSNLIL-AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+HA+ ++ + SN L + + I+ A ++F M + ++ +N+M+ ++++G
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHG 445
Query: 80 PSEEPVKLFALLKNLGIW-PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+E + LF+ + N G++ PD+ TF +L AC G + +G + RS + +G
Sbjct: 446 HAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGH----QYFRSMIQDYG 498
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 251/475 (52%), Gaps = 49/475 (10%)
Query: 16 THLTQIHAHFLRHKLHQS----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
+ QI A + + S NLI + C ++ A IF + +P++ N+
Sbjct: 2 AQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNAT 61
Query: 72 IKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
+KA + N ++ F + PDE+TF +LKAC G+ + GQ +H + +
Sbjct: 62 LKALAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQ 121
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
GFE ++ VRN +I + K G + +LF
Sbjct: 122 GFES-------------------------------NLFVRNSLIDMYFKAGYLLLARHLF 150
Query: 190 REM--RERSVVSWNLMISSLGKSGRDSEALRLFHEMRD-QAFELDEATVVAVLPICARLG 246
EM R+R+VV WN MI+ ++ + S+A+ +F M+ ++ T+V+VLP CA LG
Sbjct: 151 DEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPACAHLG 210
Query: 247 AVDIGQWIHSYAE----SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+D+G+WI + + GL+ +GNAL D Y KCG + AR VF ++ ++V+SW
Sbjct: 211 ALDLGKWIDGFISRREMALGLF-----LGNALADMYAKCGCITEARRVFNKMEERDVISW 265
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+ +I GLA G + + +M+ G PN F+G+LT C HAGLV+K F +M
Sbjct: 266 SIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDK 325
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ + P +EHYGC+VD+L R+G + +A D+I SM ++PN IWG+LL CR + +
Sbjct: 326 EYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQ 385
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
V+ ++ L+ +SG+YV L+N+Y+ GR DDA R+ MREN V K+PG S IE
Sbjct: 386 RVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIE 440
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/453 (33%), Positives = 239/453 (52%), Gaps = 37/453 (8%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPV 85
L ++ N +LA + ++ A +F++M + +N+MI Y+ N S
Sbjct: 192 LESDIYVGNSLLAMY----AKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAF 247
Query: 86 KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI-GVVEL 144
+F L+ G++ D T LL AC + ++ G+ +HG +R+ + ++E+
Sbjct: 248 LVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEM 307
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y +C M D + LF +R + VSWN MI
Sbjct: 308 YCNCNCMVDARR-------------------------------LFERVRWKDTVSWNSMI 336
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
++G E+LRLF M D+ T +AVL C ++ A+ G IHSY G
Sbjct: 337 LGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFD 396
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
+ VG ALVD Y KCG L +R VF E+P K++VSW+AM++G +GRG + + +
Sbjct: 397 ANTI-VGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDG 455
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M A V P+ F +L+ C+HAGLV + +E+F M +++ P L HY CMVD+LGR+G
Sbjct: 456 MKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAG 515
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSN 444
+ EAY +IR+M I+P + IW +LL++ R H +++LAE + +++ ++ P +Y+ LSN
Sbjct: 516 HLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSN 575
Query: 445 IYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
IYA RWDD E +R +R +KKSPG S IE
Sbjct: 576 IYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIE 608
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 215/483 (44%), Gaps = 89/483 (18%)
Query: 20 QIHAHFLRHKLHQSNLIL----AHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
Q+HAH + + ++N L A F + CG +++ A IF+ + + L+N MI+ Y
Sbjct: 80 QLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQ---AEVIFDGIVLKNSFLWNFMIRGY 136
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ NG + + L+ + G D +T+ +LKAC + + +G+ VH E++ G E
Sbjct: 137 ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ +Y G M VFD M+ RD+ N MI G+ K D +F M
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLM--- 253
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
GK+G LF D T++ +L CA L AV G+ IH
Sbjct: 254 ------------GKAG-------LF---------ADCTTLLGLLSACADLKAVKEGKVIH 285
Query: 256 SYA--ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNG 313
YA S G Y K + N+L++ YC C + AR +F+ + K+ VSWN+MI G A NG
Sbjct: 286 GYAVRNSIGNYNKFFT--NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCC-----------AHAGLVEK---------- 352
+ L+ +M G P++ TF+ VL C H+ LV+K
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 353 --------------ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM-- 396
+R +F M +L + MV G G REA ++ M
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPD-----KSLVSWSAMVAGYGLHGRGREAISILDGMKA 458
Query: 397 -SIRPNAAIWGSLLSSCRTHGHVELAE---HAVKELINLEPWNSGNYVLLSNIYAEGGRW 452
S+ P+ ++ S+LS+C G V + + +++ N++P S +Y + ++ G
Sbjct: 459 NSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALS-HYSCMVDLLGRAGHL 517
Query: 453 DDA 455
D+A
Sbjct: 518 DEA 520
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 24/235 (10%)
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
Q + L A+L + GQ +H++ S + + L FY CG++
Sbjct: 53 QQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMS 112
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
A +F I KN WN MI G A NG + LY +M+ G + T+ VL C
Sbjct: 113 QAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACG 172
Query: 346 HAGLVEKARELFASMT--GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
LVE R + + + GL S + M G G R +D + +
Sbjct: 173 DLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTS--- 229
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
W +++S G+ + A+ SG L+ ++ + G + D TL
Sbjct: 230 -WNTMIS-----GYAKNAD-------------SGTAFLVFDLMGKAGLFADCTTL 265
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 249/462 (53%), Gaps = 41/462 (8%)
Query: 20 QIHAHFLRHKLHQSNL----ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+H LR ++ ++L L F + C +I K+ + N SV+ +N++I Y
Sbjct: 325 SVHCFILRREMDGADLDLGPALMDFYAACW---KISSCEKLLCLIGNSSVVSWNTLISIY 381
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ G +EE + LF + G+ PD ++ A + AC G +R GQ +HG + + GF
Sbjct: 382 AREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFA--- 438
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
D V+N ++ + K G VD +F ++ E+
Sbjct: 439 -----------------------------DEFVQNSLMDMYSKCGFVDLAYTIFDKIWEK 469
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
S+V+WN MI ++G EAL+LF EM +++E T ++ + C+ G + G+WIH
Sbjct: 470 SIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIH 529
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
SG+ +K + + ALVD Y KCG L TA+ VF +P K+VVSW+AMI+ +G+
Sbjct: 530 HKLVVSGV-QKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQI 588
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
L+ +M+ + PN+ TF+ +L+ C HAG VE+ + F SM + IVPN EH+
Sbjct: 589 TAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRD-YGIVPNAEHFAS 647
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+VD+L R+G + AY++I+S +A+IWG+LL+ CR HG ++L + KEL + +
Sbjct: 648 IVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTND 707
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+G Y LLSNIYAEGG W ++ +R M +KK PG S IE
Sbjct: 708 TGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIE 749
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 160/342 (46%), Gaps = 31/342 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++H ++ L ++I + + G L + A K+F+++R ++ ++S++ Y NG
Sbjct: 123 KVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENG 182
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E +++ + + G+ PD T + +AC VG LR+ + VHG +IR S+R
Sbjct: 183 RPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRN 242
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y C + +F+ +S + S
Sbjct: 243 SLIVMYGQCSYLRGAKGMFESVS-------------------------------DPSTAC 271
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W MISS ++G EA+ F +M++ E++ T+++VL CARLG + G+ +H +
Sbjct: 272 WTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFIL 331
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ + +G AL+DFY C + + + I +VVSWN +IS A G E +
Sbjct: 332 RREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAM 391
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
L+ M+ KG+ P+ + ++ CA A V +++ +T
Sbjct: 392 VLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVT 433
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 154/359 (42%), Gaps = 45/359 (12%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
+ L +T L+Q+HAH + LH L + + + + +F +P
Sbjct: 5 MPLFRSCSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDS 64
Query: 66 LLFNSMIKAYSLNGPSEEPVKLF--------ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+F +IK Y + ++ V L+ L +N + + ++KA VG L
Sbjct: 65 FMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNC-----TFLYPSVIKAISVVGGLV 119
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
VG+ VHG I+++G I ++ +Y G + D KVFDE+
Sbjct: 120 VGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEI---------------- 163
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
R R +VSW+ +++ ++GR E L + M + D T+++
Sbjct: 164 ---------------RVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLS 208
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
V C ++G + + + +H Y + S+ N+L+ Y +C L A+ +F+ +
Sbjct: 209 VAEACGKVGCLRLAKSVHGYVIRKEMAGD-ASLRNSLIVMYGQCSYLRGAKGMFESVSDP 267
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+ W +MIS NG E ++ +++M V N T + VL CCA G +++ + +
Sbjct: 268 STACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSV 326
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 123/275 (44%), Gaps = 18/275 (6%)
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
H D + ++ + + G + +F + ++I + + L+H
Sbjct: 30 HSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHHLFDQVVSLYHH 89
Query: 223 MRDQAFELDEATVV---AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
+ L + +V+ + +G + +G+ +H +GL V +G +L+ Y
Sbjct: 90 HIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHV-IGTSLLGMYG 148
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+ G L AR VF EI +++VSW+++++ NGR G+E+ M+++GV P+ T +
Sbjct: 149 ELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLS 208
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG------CMVDVLGRSGCVREAYDLI 393
V C G + A+ + H V E G ++ + G+ +R A +
Sbjct: 209 VAEACGKVGCLRLAKSV-------HGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMF 261
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
S+S P+ A W S++SSC +G E A A K++
Sbjct: 262 ESVS-DPSTACWTSMISSCNQNGCFEEAIDAFKKM 295
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 146/431 (33%), Positives = 236/431 (54%), Gaps = 38/431 (8%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L+E+K+ Q P ++ +N ++ ++ G + ++ F + ++G+ P+ T +
Sbjct: 452 LSEMKF------QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDV 166
L AC V +L++G+ +HG ++R+ E + ++ +Y+ C ++ VF E+S RDV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
V WN +IS+ +SGR AL L EM
Sbjct: 566 -------------------------------VVWNSIISACAQSGRSVNALDLLREMNLS 594
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
E++ T+V+ LP C++L A+ G+ IH + GL + N+L+D Y +CG +
Sbjct: 595 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL-DTCNFILNSLIDMYGRCGSIQK 653
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
+R +F +P++++VSWN MIS +G G V L++ G+ PN TF +L+ C+H
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSH 713
Query: 347 AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
+GL+E+ + F M +++ P +E Y CMVD+L R+G E + I M PNAA+WG
Sbjct: 714 SGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWG 773
Query: 407 SLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENN 466
SLL +CR H + +LAE+A + L LEP +SGNYVL++NIY+ GRW+DA +R M+E
Sbjct: 774 SLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERG 833
Query: 467 VKKSPGQSLIE 477
V K PG S IE
Sbjct: 834 VTKPPGCSWIE 844
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 40/381 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q+HA + + + + + + V ++ A ++F++M +V + ++++ Y G
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +KLF L+ N G+ PD + F + KAC + + RVG+ V+ ++ GFE ++
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV-- 197
+++++ CG+MD + F+E+ +DV + N+M+ G+ KG+ K L +M+ V
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 198 --VSWNLMISSLGKSGR------------------------------------DSEALRL 219
V+WN +IS +SG+ D EAL +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F +M + + + T+ + + C L + G+ IH Y + VGN+LVD+Y
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KC ++ AR F I + ++VSWNAM++G A G E +EL +M +G+ P+ T+ G
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 340 VLTCCAHAGLVEKARELFASM 360
++T G + A E F M
Sbjct: 470 LVTGFTQYGDGKAALEFFQRM 490
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 188/415 (45%), Gaps = 46/415 (11%)
Query: 49 EIKYATKIFNQMR-----NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
+ + A+K F +M P+V+ + ++I NG E + +F + G+ P+ T
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEM 161
A + AC + LR G+ +HG I+ E + +G +V+ Y C ++ + F +
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----ERSVVSWNLMISSLGKSGRDSEAL 217
D++ N M+ G+ +G ++ + L EM+ E +++WN +++ + G AL
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484
Query: 218 RLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDF 277
F M + + T+ L C ++ + +G+ IH Y + + VG+AL+
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI-ELSTGVGSALISM 543
Query: 278 YCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATF 337
Y C L+ A +VF E+ ++VV WN++IS A +GR ++L +M V N T
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 338 VGVLTCCAHAGLVEKAREL--FASMTGLHS--------------------------IVP- 368
V L C+ + + +E+ F GL + ++P
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 369 -NLEHYGCMVDVLGRSGCVREAYDL---IRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+L + M+ V G G +A +L R+M ++PN + +LLS+C G +E
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIE 718
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 98 PDE--YTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
PDE +A +L+ C + +LR+G VH +++ +G + + ++E+Y G ++D
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FD+MS R+V ++ +C GD + E
Sbjct: 145 RMFDKMSERNVFSWTAIMEMYCGLGDYE-------------------------------E 173
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
++LF+ M ++ D V C+ L +G+ ++ Y S G + V +++
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSIL 232
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D + KCG +D AR F+EI K+V WN M+SG G + ++ M GV P++
Sbjct: 233 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV 292
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
T+ +++ A +G E+A + F M GL PN+ + ++ ++G EA + R
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 396 M---SIRPNAAIWGSLLSSC 412
M ++PN+ S +S+C
Sbjct: 353 MVLEGVKPNSITIASAVSAC 372
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 237/460 (51%), Gaps = 35/460 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q HAH L+ + +S ++ +++F+ + V+ + +MI + N
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRND 183
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
S E + F +K G+ +E T +LKA D+R G+ +HG + +G R + I
Sbjct: 184 SSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVR-CDVFI 242
Query: 140 G--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G +V++Y CG DD KVFD EM R+V
Sbjct: 243 GSSLVDMYGKCGCYDDAQKVFD-------------------------------EMPSRNV 271
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W +I+ + + + +F EM +E T+ +VL CA +GA+ G+ +H Y
Sbjct: 272 VTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + +VG L+DFY KCG L+ A VF+ + KNV +W AMI+G A +G
Sbjct: 332 VIKNSIEINT-TVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIG 390
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
V+L+ M++ VSPN+ TF+ VL+ CAH GLVE+ R LF SM ++ P +HY CMV
Sbjct: 391 AVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMV 450
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+ GR G + EA LI M + P A+WG+L SC H EL ++A +I L+P +SG
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSG 510
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y LL+N+Y+E WDD +R M++ V KSPG S IE
Sbjct: 511 RYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIE 550
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 219/490 (44%), Gaps = 77/490 (15%)
Query: 20 QIHAHFLRHKLHQS--NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
QIH L + + +L L+ + C + +YA ++ Q++ PS+ L++S++ +S
Sbjct: 20 QIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFSG 79
Query: 78 NGPSEEPVKLFAL--LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ + ++ G+ P +TF PLLKA + D Q H I++ GF+
Sbjct: 80 RVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQ-FHAHILKFGFDSDL 138
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+R ++ Y++CG + G +VFD +DV+ MI GF + + + F EM+
Sbjct: 139 FVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRS 198
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
V + +E TVV+VL + V G+ IH
Sbjct: 199 GVAA-------------------------------NEMTVVSVLKATRKAEDVRFGRSIH 227
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ +G R V +G++LVD Y KCG D A+ VF E+P +NVV+W A+I+G
Sbjct: 228 GFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCF 287
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
E G+ ++E+M+ V+PN+ T VL+ CAH G + + R + + +SI N
Sbjct: 288 EKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIK-NSIEINTTVGTT 346
Query: 376 MVDVLGRSGCVRE-------------------------------AYDLIRSM---SIRPN 401
++D + GC+ E A DL +M + PN
Sbjct: 347 LIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPN 406
Query: 402 AAIWGSLLSSCRTHGHVELAEH---AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
+ +LS+C G VE ++KE NLEP + +Y + +++ G ++A+ L
Sbjct: 407 EVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEP-KADHYACMVDLFGRKGLLEEAKAL 465
Query: 459 --RMWMRENN 466
RM M N
Sbjct: 466 IERMPMEPTN 475
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 225/402 (55%), Gaps = 25/402 (6%)
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGM 155
P +TF LL + C H +++SG G +G +V Y +D+
Sbjct: 87 PLSFTF--LLSSPAAASHAPFALCSHALLVKSGHFASGDPFLGSALVSFYAKSRLLDEAR 144
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VFDEM RD V N ++ + + G VD LF EM ER+VVSW M+S ++GR
Sbjct: 145 RVFDEMPRRDTAVYNALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHEA 204
Query: 216 ALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNAL 274
A+ F EM + A + +E TV +VLP CA +GA+++G + YA G V V NAL
Sbjct: 205 AVETFLEMWEGAGVQPNELTVSSVLPACAAVGAMELGTKVEEYARGKGHLGNVF-VTNAL 263
Query: 275 VDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAK----- 328
++ Y KCG + A VF+ I R+++ SWN MI A +G + L+ ++ +
Sbjct: 264 LEMYAKCGSIQRAWQVFQGIGHRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISCSN 323
Query: 329 -------------GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
GV P+ TFVGV+ C H GLV++ + +F SM SI P +EHYGC
Sbjct: 324 SLVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHYGC 383
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G ++EAY +I SM P+A IWG+LL +C HG++ELAE AV +L+ LEP N
Sbjct: 384 MVDLLGRAGLLKEAYSMIISMPAEPDAVIWGALLGACSFHGNIELAETAVDKLMYLEPQN 443
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ N V+LSNIYA G+WD + ++E + KKS G S IE
Sbjct: 444 TANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIE 485
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 261/462 (56%), Gaps = 6/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA ++ L + F+ + L ++ T++F +M + + +N MI Y
Sbjct: 129 KVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCK 188
Query: 80 PSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
EE V ++ + P+E T L AC + +L +G+ +H + I S + +
Sbjct: 189 RFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIH-DYIASELDLTTIMG 247
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++Y CG + ++FD M+ ++V M+ G+ G +D+ LF R +V
Sbjct: 248 NALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIV 307
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
W MI+ + R E + LF EM+ + + D+ VV +L CA+ GA++ G+WIH+Y
Sbjct: 308 LWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYI 367
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ + + V VG AL++ Y KCG ++ + +F + K+ SW ++I GLA NG+
Sbjct: 368 DENRIKVDAV-VGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEA 426
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL++ M G+ P+ TFV VL+ C+HAGLVE+ R+LF SM+ ++ I PNLEHYGC +D
Sbjct: 427 LELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFID 486
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAI---WGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+LGR+G ++EA +L++ + + N I +G+LLS+CRT+G++++ E L ++ +
Sbjct: 487 LLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSD 546
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
S + LL++IYA RW+D +R M++ +KK PG S IE
Sbjct: 547 SSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIE 588
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 242/540 (44%), Gaps = 114/540 (21%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFV--SVCGTLNEIKYATKIFNQMRNP 63
+ LL + + L QI AH L Q L + S+ +L + YA +IFN + +P
Sbjct: 12 ISLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDP 71
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
S+ ++N MIKA+ +G + LF L+ G+WPD YT+ +LK +G++R G+ VH
Sbjct: 72 SLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVH 131
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
++++G E + +++Y G ++ +VF+EM RD + N+MI G+ + +
Sbjct: 132 AFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFE 191
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+ + ++R R++ E ++ +EATVV+ L CA
Sbjct: 192 EAVDVYR---------------------------RMWTESNEKP---NEATVVSTLSACA 221
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK----------------------- 280
L +++G+ IH Y S + +GNAL+D YCK
Sbjct: 222 VLRNLELGKEIHDYIASELDLTTI--MGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWT 279
Query: 281 --------CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
CG LD ARN+F+ P +++V W AMI+G R E + L+ +M +GV P
Sbjct: 280 SMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKP 339
Query: 333 NKATFVGVLTCCAHAGLVEKAR----------------------ELFAS----------M 360
+K V +LT CA +G +E+ + E++A
Sbjct: 340 DKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIF 399
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHGH 417
GL + + ++ L +G EA +L ++M ++P+ + ++LS+C G
Sbjct: 400 NGLKE--KDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGL 457
Query: 418 VELAE---HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
VE H++ + ++EP N +Y ++ G +AE L VKK P Q+
Sbjct: 458 VEEGRKLFHSMSSMYHIEP-NLEHYGCFIDLLGRAGLLQEAEEL--------VKKLPAQN 508
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 246/460 (53%), Gaps = 34/460 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HAH ++ + + + + A ++ ++M +V+ + +MI YS G
Sbjct: 498 RVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRG 557
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + LF + G P+E+TFA +L +C ++G+ +H +I++ FE +
Sbjct: 558 YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGS 617
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y G++ + +VFD + ER VVS
Sbjct: 618 SLLDMYAKAGKICEARRVFDGLP-------------------------------ERDVVS 646
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+IS + G D EAL LF ++ + + T +VL + L A+D G+ +HS+
Sbjct: 647 CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 706
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ L VV + N+L+D Y KCG L +R +F +P + V+SWNAM+ G + +G G V
Sbjct: 707 RAKLPFYVV-LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 765
Query: 320 ELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS-IVPNLEHYGCMV 377
EL++ M + V P+ TF+ VL+ C+H G+ ++ E+F M P +EHYGC+V
Sbjct: 766 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 825
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+ GR+G V EA++ I+ M P AAIWGSLL +CR H +V + E + L+ +E N+G
Sbjct: 826 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAG 885
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV+LSN+YA GRWDD T+R M+E V K PG+S IE
Sbjct: 886 NYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIE 925
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLH-----QSNLILAHFVSVCGTLNEIKYATKIFNQ 59
+L L G H Q+H+H LR KL Q++LI S CG+L Y+ +IF+
Sbjct: 685 VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI--DMYSKCGSLT---YSRRIFDS 739
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRV 118
M +V+ +N+M+ YS +G E V+LF L+K + PD TF +L C G
Sbjct: 740 MPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDR 799
Query: 119 GQCVHGEII--RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
G + E++ + GFE VV+L+ G++++ + +M
Sbjct: 800 GLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844
>gi|297797141|ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
gi|297312290|gb|EFH42714.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
Length = 1401
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/474 (33%), Positives = 254/474 (53%), Gaps = 21/474 (4%)
Query: 14 TRTHLTQIHAHFL-----RHKLHQSNL---ILAHFVSVCGTLNE----IKYATKIFNQMR 61
T HL Q HA F+ L+Q+++ +L S+ + + + YAT + +
Sbjct: 430 TLKHLHQFHAQFITSGRISSSLNQNSVFANVLFAITSISPSASTSNVVVSYATSVLRFIT 489
Query: 62 NPSVLLFNSMIKAYSLNGP-SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV--GDLRV 118
NPS FN++I+ Y+L+ P S + F ++ + PD +T+ + KAC GDL +
Sbjct: 490 NPSTFCFNTIIRIYTLHEPLSLSSQRFFVEMRRRSVPPDFHTYPFVFKACAAKKNGDLSL 549
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ +H + +R G ++ Y+ + +++FDE RDV+ N++I G K
Sbjct: 550 VKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNVLIDGLVK 609
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
++ + LF M R +VSWN +I+ + + EA+ LF EM + D +V+
Sbjct: 610 ACEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEMIGLGLKPDNVAIVST 669
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+ G ++ G+ IH Y + L+ + LVDFY KCG +DTA +F K
Sbjct: 670 LSACAQSGDLEKGKAIHDYTKKKRLFIDSF-LATGLVDFYAKCGFIDTAMEIFHLSSDKT 728
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+ +WNAMI+GLA +G GEL V+ + +M++ G+ P+ +F+ VL C+H+GLV +AR+LF
Sbjct: 729 LFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSGLVGEARKLFD 788
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS----IRPNAAIWGSLLSSCRT 414
M L+ + ++HYGCM D+LGR+G + EA ++I M R W LL CR
Sbjct: 789 QMRSLYDVDREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGKREKLLAWSGLLGGCRI 848
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR-MWMRENNV 467
HG++E+AE A K + L P + G Y ++ +YA RW+D +R M R+ V
Sbjct: 849 HGNIEVAEKAAKRVKALSPEDGGVYKVMVEMYANAERWEDVVKVREMIERDKKV 902
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 252/447 (56%), Gaps = 43/447 (9%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ L+ + A ++F++ ++ ++N+M+KA +L EE + A + LG+ D
Sbjct: 290 LIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLADMGRLGVPVD 349
Query: 100 EYTFAPLLKACLGV------GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
Y++A LKAC+ RV + +H IR G+ L+T
Sbjct: 350 SYSYAHGLKACIAASASHLPASARVRE-MHAHAIRRGYG-----------LHTH------ 391
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
V +I + K G V +F M +R++VSW+ MI K+ R
Sbjct: 392 --------------VATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERP 437
Query: 214 SEALRLFHEM--RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+A+++F EM D + T+V+VL CA + A+ G+ +H+Y G + +VSV
Sbjct: 438 GDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRG-FDLLVSVL 496
Query: 272 NALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+ Y KCG L+T R +F I R+NVVSWN++ISG +G G ++++E+MI +G+
Sbjct: 497 NALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGI 556
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
SPN TFV VL C+H GLVE+ ++LF SM +++ P EHY CMVD+LGR+G + EA
Sbjct: 557 SPNIITFVSVLGACSHVGLVEQGKKLFESMVE-YNVTPRAEHYACMVDLLGRAGRLDEAV 615
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
+LI+SM I+P+ +WGSLL +CR HGHVE AE A L +LEP N+GNYVLL++IYA
Sbjct: 616 ELIQSMRIQPSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAK 675
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + L+ + E+ ++K PG S IE
Sbjct: 676 LQNQVDVLKELLEEHALEKVPGCSWIE 702
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 38/302 (12%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HAH +R + + L + YA ++F M + +++ +++MI Y+ N
Sbjct: 376 EMHAHAIRRGYGLHTHVATTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNE 435
Query: 80 PSEEPVKLFA--LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ +++F + + + P+ T +L AC GV L G+ +H I+R GF+ S+
Sbjct: 436 RPGDAIQIFQEMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSV 495
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ +Y CG ++ G +F+ + R R+V
Sbjct: 496 LNALMAMYMKCGCLETGRYIFNWIG------------------------------RRRNV 525
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN +IS G G E+L++F EM ++ + T V+VL C+ +G V+ G+ +
Sbjct: 526 VSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQGKKLFES 585
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI---PRKNVVSWNAMISGLAFNGR 314
+ + +VD + G LD A + + + P V W +++ +G
Sbjct: 586 MVEYNVTPRAEHYA-CMVDLLGRAGRLDEAVELIQSMRIQPSPQV--WGSLLGACRIHGH 642
Query: 315 GE 316
E
Sbjct: 643 VE 644
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 186/478 (38%), Gaps = 105/478 (21%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEP------------VKLFALLKNLGIWPDEYTF 103
+F + R + F S+ A S P+ + + ALL+ L P + T+
Sbjct: 193 VFRRPRLSRLRCFASLAPASSGASPANDDHLIQMLCAHGRLAQATALLQGLPA-PTQRTY 251
Query: 104 APLLKACLGVGDLRVGQCVH-----GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVF 158
LL A D + VH + RS + F S R+ +E Y + + +VF
Sbjct: 252 ESLLLAAARARDTALAAAVHRRLEADPVFRS--DPFLSTRL--IEAYAALSALPAARQVF 307
Query: 159 DEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
DE +++ V WN M+ +L + EAL
Sbjct: 308 DEAPVKNIFV-------------------------------WNAMLKALALADHGEEALT 336
Query: 219 LFHEMRDQAFELDEATVVAVLPIC-----ARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
+M +D + L C + L A + +H++A G Y V
Sbjct: 337 CLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRG-YGLHTHVATT 395
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS-- 331
L+D Y K GI+ A VF +P +N+VSW+AMI A N R ++++++M+A
Sbjct: 396 LIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLV 455
Query: 332 PNKATFVGVLTCCA-----------HAGLVEKARELFASMTGLHSIVPNLEHYGC----- 375
PN T V VL CA HA ++ + +L S+ L++++ GC
Sbjct: 456 PNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSV--LNALMAMYMKCGCLETGR 513
Query: 376 -----------------MVDVLGRSGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTH 415
++ G G RE+ + M I PN + S+L +C
Sbjct: 514 YIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHV 573
Query: 416 GHVELAEHAVKELI--NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
G VE + + ++ N+ P + +Y + ++ GR D+A L MR ++ SP
Sbjct: 574 GLVEQGKKLFESMVEYNVTP-RAEHYACMVDLLGRAGRLDEAVELIQSMR---IQPSP 627
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 256/461 (55%), Gaps = 6/461 (1%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA ++ + + + L + +A K+F++M ++L+N M++ Y G
Sbjct: 67 KVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCG 126
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG-SIR 138
V L ++ G PD T + AC GDL +G+ + + G F +
Sbjct: 127 RFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYM--DGVFGFSLPVA 184
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
++++YT G +++ +K+F +M R++I +++ G+ G +DK LF + ++ ++
Sbjct: 185 NALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLI 244
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
W MI++ + G EAL LF +M+ Q E D+ TVV +L CA +GA+D G+WIH YA
Sbjct: 245 LWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYA 304
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
E + V +G AL++ Y KCG +D + +F + ++ +W A+I GLA NG+
Sbjct: 305 EGRNMKIDAV-LGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKA 363
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL+E+M P+ TF+GVL C H GLV++ R F +M ++ I P +EHY C+V+
Sbjct: 364 LELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVN 423
Query: 379 VLGRSGCVREAYDLIRSMSIRPNA-AIWGSLLSSCRTHGHVELAEHAVKELINLE-PWNS 436
+LG +G + EA LIR M + + ++G+LL++C+ +G+VE++E K + + N
Sbjct: 424 LLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNP 483
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VL+SN+YA RW+++ +R M VKK+ G S+IE
Sbjct: 484 DVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTAGCSMIE 524
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 188/429 (43%), Gaps = 69/429 (16%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-GQCVHGEII 127
N +I+ + G + ++ L+ G+ D YT+ +L+A +GV L V G+ VH +
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRA-IGVMKLSVEGRKVHAAAV 73
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++GF ++E+YT G++D KVFDEM R +++ N+M+ +
Sbjct: 74 KTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYI---------- 123
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+ GR + A+ L EM D T+V + C+R G
Sbjct: 124 ---------------------RCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAGD 162
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+ I +Y + G++ + V NAL+D Y K G L+ A +F+++P +N++SW ++S
Sbjct: 163 LSLGRRIRAYMD--GVFGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVS 220
Query: 308 GLAFNGR-------------------------------GELGVELYEQMIAKGVSPNKAT 336
G A G+ E + L+ M + V P+K T
Sbjct: 221 GYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFT 280
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM 396
V +LTCCA+ G +++ + G + + + ++++ + G V ++ + M
Sbjct: 281 VVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTA-LIEMYSKCGHVDKSLQIFGRM 339
Query: 397 SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG-NYVLLSNIYAEGGRWDDA 455
R +AA W +++ T+G A +E+ + G ++ + N GG D+
Sbjct: 340 QGR-DAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEG 398
Query: 456 ETLRMWMRE 464
M+E
Sbjct: 399 RRHFQAMKE 407
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 240/427 (56%), Gaps = 14/427 (3%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWP--DEYTFAPLLKAC 110
A +F++M + +N MI Y+ NG E +LF L P D + + ++
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGF 287
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+ G L + E+ + ++ G Y Q++ ++FD+M R+ N
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAG----YVQSQQIEKARELFDQMPSRNTSSWN 343
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
M+ G+ + G++D+ LF EM +R +SW MIS +SG+ EAL LF +M+ L
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGIL 403
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+ + + L CA + A+++G+ +H +G ++ GNAL+ Y KCG ++ A +V
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIA-GNALLAMYGKCGSIEEAFDV 462
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F++I K++VSWN MI+G A +G G+ + L+E M + P+ T VGVL+ C+H GLV
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLV 521
Query: 351 EKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+K E F SM + I N +HY CM+D+LGR+G + EA +L++SM P+AA WG+LL
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLG 581
Query: 411 SCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+ R HG EL E A +++ +EP NSG YVLLSN+YA GRW + +R MR+ VKK
Sbjct: 582 ASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKV 641
Query: 471 PGQSLIE 477
PG S +E
Sbjct: 642 PGYSWVE 648
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 31/370 (8%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKAC 110
A +FNQM V+ +N+M+ ++ NG EE K+F L+KN E ++ LL A
Sbjct: 141 ARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKN------EISWNGLLSAY 194
Query: 111 LGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRN 170
+ G + + + + + + G Y ++DD +FD M RD I N
Sbjct: 195 VQNGRIEDARRLFDSKMDWEIVSWNCLMGG----YVRKKRLDDARSLFDRMPVRDKISWN 250
Query: 171 LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFEL 230
+MI G+ + G + + LF E+ R V +W M+S ++G EA R+F EM E
Sbjct: 251 IMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EK 306
Query: 231 DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNV 290
+E + A++ G V Q + + + S N +V Y +CG +D A+ +
Sbjct: 307 NEVSWNAMIA-----GYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKIL 361
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLV 350
F E+P+++ +SW AMISG A +G+ E + L+ +M G N++ L+ CA +
Sbjct: 362 FDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAAL 421
Query: 351 EKARELFASM--TGLHS--IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG 406
E ++L + G + I N ++ + G+ G + EA+D+ ++ + W
Sbjct: 422 ELGKQLHGRLVKAGFQTGYIAGN-----ALLAMYGKCGSIEEAFDVFEDIT-EKDIVSWN 475
Query: 407 SLLSSCRTHG 416
++++ HG
Sbjct: 476 TMIAGYARHG 485
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 41/335 (12%)
Query: 116 LRVGQCVHGEIIRSGFERFGSIRI-GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+R GQC + +G R ++ ++ Y S + D KVF++M RD+I N+M+
Sbjct: 71 MRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLS 130
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+ K G++ LF +M E+ VVSWN M+S ++G EA ++F DQ +E +
Sbjct: 131 GYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF----DQMLVKNEIS 186
Query: 235 VVAVLPICARLGAVDIGQ--------W-IHSYAESSGLYRKVVSVGNA------------ 273
+L + G ++ + W I S+ G Y + + +A
Sbjct: 187 WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDK 246
Query: 274 -----LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
++ Y + G+L AR +F+E+P ++V +W AM+SG NG + ++E+M K
Sbjct: 247 ISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK 306
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
N+ ++ ++ + +EKARELF M N + MV + G + +
Sbjct: 307 ----NEVSWNAMIAGYVQSQQIEKARELFDQMPS-----RNTSSWNTMVTGYAQCGNIDQ 357
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
A L M R + W +++S G E A H
Sbjct: 358 AKILFDEMPQR-DCISWAAMISGYAQSGQSEEALH 391
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 41/320 (12%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +++ K +F++M + + +MI Y+ +G SEE + LF +K G +
Sbjct: 352 CGNIDQAKI---LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSAL 408
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A L +C + L +G+ +HG ++++GF+ ++ +Y CG +++ VF++++
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE 468
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+D++ N MI G+ + G GK EAL LF M
Sbjct: 469 KDIVSWNTMIAGYARHG--------------------------FGK-----EALALFESM 497
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
+ + D+ T+V VL C+ G VD G ++ +S ++ G+ ++D + G
Sbjct: 498 K-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHY-TCMIDLLGRAG 555
Query: 283 ILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATFVGV 340
LD A N+ K +P + +W A++ +G ELG + E++ + P N +V +
Sbjct: 556 RLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFE--MEPDNSGMYVLL 613
Query: 341 LTCCAHAGLVEKARELFASM 360
A +G + RE+ + M
Sbjct: 614 SNLYAASGRWREVREMRSKM 633
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 24/318 (7%)
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ Y GQ + + VF+ M R + N MI G+ D +F +M +R ++SWN
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
+M+S K+G S A LF++M E D + A+L A+ G V+ + I
Sbjct: 127 VMLSGYVKNGNLSAARALFNQMP----EKDVVSWNAMLSGFAQNGFVEEARKIFDQM--- 179
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
L + +S N L+ Y + G ++ AR +F +VSWN ++ G R + L
Sbjct: 180 -LVKNEIS-WNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+++M + +K ++ ++T A GL+ +AR LF + + ++ + MV
Sbjct: 238 FDRMPVR----DKISWNIMITGYAQNGLLSEARRLFEELP-----IRDVFAWTAMVSGFV 288
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW-NSGNYV 440
++G + EA + M N W ++++ +E A +EL + P N+ ++
Sbjct: 289 QNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIEKA----RELFDQMPSRNTSSWN 343
Query: 441 LLSNIYAEGGRWDDAETL 458
+ YA+ G D A+ L
Sbjct: 344 TMVTGYAQCGNIDQAKIL 361
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 50/264 (18%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D++ N I + +KG + L +F MR RS V++N MIS + + A ++F +M
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
D+ D+ W N ++ Y K G L
Sbjct: 119 DR----------------------DLISW------------------NVMLSGYVKNGNL 138
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
AR +F ++P K+VVSWNAM+SG A NG E ++++QM+ K N+ ++ G+L+
Sbjct: 139 SAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAY 194
Query: 345 AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAI 404
G +E AR LF S + + C++ R + +A L M +R +
Sbjct: 195 VQNGRIEDARRLFDSKMDWEIV-----SWNCLMGGYVRKKRLDDARSLFDRMPVRDKIS- 248
Query: 405 WGSLLSSCRTHGHVELAEHAVKEL 428
W +++ +G + A +EL
Sbjct: 249 WNIMITGYAQNGLLSEARRLFEEL 272
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 245/462 (53%), Gaps = 34/462 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L QIHA + L ++ ++ +S + I Y ++F + P LF+S+I S
Sbjct: 35 LQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLITLTS 94
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+E + + + I YTF+ ++K+ + +G+ +H + G+
Sbjct: 95 KFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAY 154
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ +V Y G + KVFD+ M E++
Sbjct: 155 VQAALVSFYAKSGHVMIARKVFDK-------------------------------MPEKT 183
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VV+WN MIS ++G EA+ LF M+D + D +T V++L CA++GA+ +G W+H
Sbjct: 184 VVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHE 243
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y + VV +G AL++ Y +CG + AR VF + KN+V+W AMISG +G G
Sbjct: 244 YIARNCFDLNVV-LGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGS 302
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+EL+ +M G PN TFV VL+ CAHAGLV++ R++F +M + +VP++EH CM
Sbjct: 303 QAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCM 362
Query: 377 VDVLGRSGCVREAYDLIRSMSIR-PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
VD+LGR+G + EAY I++ S + P A+W ++L +C+ H + +L + L+++EP N
Sbjct: 363 VDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPEN 422
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G+YV+LSNIYA GR D E +R M N +KK G S I+
Sbjct: 423 PGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTID 464
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 246/438 (56%), Gaps = 2/438 (0%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
+ V L ++ A ++ + M + + + ++I + G + E +KL++ + G P+
Sbjct: 319 LLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPN 378
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
F+ +L AC + DLR G +H ++ G + ++++Y C Q +VF+
Sbjct: 379 ISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFN 438
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+ ++ + N +I G+ G + + LF +M R+ VSWN MIS ++ R +AL
Sbjct: 439 SLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNY 498
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F+ M E T+ +VL CA L ++++G+ +H+ G+ + +G AL D Y
Sbjct: 499 FYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIF-MGTALCDMYA 557
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
K G LD++R VF ++P KN ++W AM+ GLA NG E + L+E MI G++PN+ TF+
Sbjct: 558 KSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLA 617
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C+H GLVE+A F +M H I P +HY CMVDVL R+GC+ EA +L+ +S
Sbjct: 618 ILFACSHCGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSE 676
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
+ + W SLLS+C T+ + E+ E A K+L LE N+ YVLLSN+YA G+W DA R
Sbjct: 677 LDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETR 736
Query: 460 MWMRENNVKKSPGQSLIE 477
+ M+ ++KK G S ++
Sbjct: 737 ILMQGASLKKDAGCSWLQ 754
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 201/483 (41%), Gaps = 79/483 (16%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
++ A +++ + SV F +MI + N ++ +F + + P+ T ++KA
Sbjct: 196 VRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKA 255
Query: 110 CLGVGDLRVGQCVHGEIIRSG-FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
C+G G+ + V G ++ FE+ + ++ LY G +VFD+M RDV+
Sbjct: 256 CVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVS 315
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
++ + GD+D + M R+ VSW +I+ + G +EAL+L+ +M
Sbjct: 316 WTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGC 375
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ + +VL CA L + G IH+ A G + V ++L+D YCKC A+
Sbjct: 376 RPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLF-VSSSLIDMYCKCKQCTYAQ 434
Query: 289 NVFKEIPRKNVVSWNAMISGLAFNGR--------------------------------GE 316
VF +P KN V WN++ISG ++NG+ G+
Sbjct: 435 RVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGD 494
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAH------------------------------ 346
+ + M+A G P + T VL CA+
Sbjct: 495 -ALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALC 553
Query: 347 -----AGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSM---SI 398
+G ++ +R +F M ++I + MV L +G E+ L M I
Sbjct: 554 DMYAKSGDLDSSRRVFYQMPEKNNIT-----WTAMVQGLAENGFAEESISLFEDMIENGI 608
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKEL-INLEPWNSGNYVLLSNIYAEGGRWDDAET 457
PN + ++L +C G VE A H + + + P S +Y + ++ A G +AE
Sbjct: 609 APNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEE 668
Query: 458 LRM 460
L M
Sbjct: 669 LLM 671
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 182/477 (38%), Gaps = 98/477 (20%)
Query: 62 NPSVLLFNSMIKAYSL---NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV----- 113
+PS L IKA+ L NGP P K+ + + T A LL+ C +
Sbjct: 34 DPSPLTLP--IKAFKLRLANGPPLAPTA-----KDFKTYSE--TCASLLRLCRAMSATST 84
Query: 114 ---------GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
G L + +H +RSG S+ ++ Y + + D + F +
Sbjct: 85 TMPSYAPSSGCLPLVLSLHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAA 144
Query: 165 DV---IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLF- 220
D + M+ K GD+ LF M E+SVVS+ M+ +L K G +A+ L+
Sbjct: 145 DAASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYE 204
Query: 221 -------------------HEMRDQAFEL-----------DEATVVAVLPICARLGAVDI 250
+E+ AF + + T++ V+ C G D+
Sbjct: 205 RCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDL 264
Query: 251 GQWIHSYAESSGLYRKVVSVGN-------------------------------ALVDFYC 279
+ A L+ K + V N AL+D Y
Sbjct: 265 AMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYA 324
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
G LD AR V +P +N VSW +I+ G ++LY QM+A G PN + F
Sbjct: 325 DLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSS 384
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL+ CA + + A+ + S NL ++D+ + A + S+ +
Sbjct: 385 VLSACATLQDLRGGTRIHANALKMGSST-NLFVSSSLIDMYCKCKQCTYAQRVFNSLPEK 443
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDA 455
N W SL+S +G + AE L N P NS ++ + + YAE R+ DA
Sbjct: 444 -NTVCWNSLISGYSWNGKMVEAEG----LFNKMPARNSVSWNTMISGYAENRRFGDA 495
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HA ++ + + + + ++ + ++F QM + + + +M++ + NG
Sbjct: 533 VHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGF 592
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+EE + LF + GI P+E+TF +L AC G V Q +H
Sbjct: 593 AEESISLFEDMIENGIAPNEHTFLAILFACSHCG--LVEQAIH 633
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 223/410 (54%), Gaps = 32/410 (7%)
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I G E+ + F +++ + DEYT +L + + ++ VH II
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++GFE + +V N +I + K+G +D +
Sbjct: 69 KTGFEAYK-------------------------------LVNNALIDMYAKQGKLDCAIM 97
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+F +M ++ VVSW +++ +G EA++LF +MR D+ V +VL CA L
Sbjct: 98 VFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTV 157
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+D GQ IH+ SGL +SV N+LV Y KCG + A F +P ++V+SW A+I
Sbjct: 158 MDFGQQIHATLVKSGL-ESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIV 216
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G A NGRG+ ++ Y+QMIA G P+ TF+G+L C+H GL+ R F +M ++ I
Sbjct: 217 GYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIK 276
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P EHY CM+D+LGRSG + EA L+ M + P+A +W +LL++CR H +EL E A K
Sbjct: 277 PGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKN 336
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L LEP NS YV+LSN+Y+ G+W+DA +R MR + K PG S IE
Sbjct: 337 LFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIE 386
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 131/306 (42%), Gaps = 44/306 (14%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+H ++ L+ + + ++ A +F++M + V+ + S++ YS NG
Sbjct: 62 SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE +KLF ++ G++PD+ A +L AC + + GQ +H +++SG E S+
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V +Y CG + D + FD M RDVI S
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVI-------------------------------S 210
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W +I ++GR +L+ + +M + D T + +L C+ G + G+ +Y E
Sbjct: 211 WTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGR---AYFE 267
Query: 260 SSGLYRKVVSVGNA------LVDFYCKCGILDTARNVFKE-IPRKNVVSWNAMISGLAFN 312
+ KV + ++D + G L A+ + + + + V W A+++ +
Sbjct: 268 A---MDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVH 324
Query: 313 GRGELG 318
ELG
Sbjct: 325 KELELG 330
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN +I + G + +AL F +MR + ++DE T+ +VL A + + +H
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+G + V NAL+D Y K G LD A VF ++ K+VVSW ++++G + NG E
Sbjct: 67 IIKTG-FEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEE 125
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYGC 375
++L+ +M GV P++ VL+ CA +++ +++ A++ +GL S +L
Sbjct: 126 AIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLES---SLSVDNS 182
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
+V + + G + +A +M R + W +L+
Sbjct: 183 LVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIHA ++ L S + V++ I A + F+ M V+ + ++I Y+ NG
Sbjct: 163 QIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNG 222
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC-------VHGEIIRSGFE 132
+ ++ + + G PD TF LL AC G L G+ V+G I+ G E
Sbjct: 223 RGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG--IKPGPE 280
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEM--SHRDVIVRNLM----IHGFCKKGDV-DKG 185
+ + ++L G++ + + ++M + V+ + L+ +H + G++ K
Sbjct: 281 HYACM----IDLLGRSGKLAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKN 336
Query: 186 LYLFREMRERSVVSWNLMISSLGK 209
L+ M V + M S+ GK
Sbjct: 337 LFELEPMNSMPYVMLSNMYSAAGK 360
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 242/460 (52%), Gaps = 32/460 (6%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L ++H + +RH L+ FV+ + A ++F M +V +N++I +
Sbjct: 255 LKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQ 314
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG + + L+ + G+ PD +T LL A + LR G+ VHG ++R G E I
Sbjct: 315 NGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFI 374
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
I ++ LY CG+ +FD M E+S
Sbjct: 375 GISLLSLYIHCGESSSARLLFDGM-------------------------------EEKSS 403
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
VSWN MIS ++G +AL LF ++ F+ + VV+VL C++ A+ +G+ H Y
Sbjct: 404 VSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCY 463
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
A + L V V + +D Y K G + +R+VF + K++ SWNA+I+ +G GE
Sbjct: 464 ALKALLMEDVF-VACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEE 522
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+EL+E+M G P+ TF+G+LT C+HAGLVE+ + F M H I P LEHY C++
Sbjct: 523 SIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVM 582
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+LGR+G + +A L+ M +P++ +W SLLS CR G +E+ + ++L+ LEP N
Sbjct: 583 DMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVE 642
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
NYV LSN+YA GRWDD +R +++ ++K G S IE
Sbjct: 643 NYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIE 682
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 156/340 (45%), Gaps = 37/340 (10%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++ L + +++ G + A K+F+ M +++ +NS+I +S NG
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGF 112
Query: 81 SEEPVKLFA--LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
S++ + + G+ PD T +L C D+++G +HG ++ G +
Sbjct: 113 SKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVN 172
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVV 198
+V++Y+ CG + + +FD+ + ++ + N MI G C KG Y+F
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKG------YIF--------- 217
Query: 199 SWNLMISSLGKSGRDSEALRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSY 257
EA LF EM+ Q E++E TV+ +LP C + + + +H Y
Sbjct: 218 ----------------EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGY 261
Query: 258 AESSGL-YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+ G Y ++V+ N V Y KCG+L A VF + K V SWNA+I G A NG
Sbjct: 262 SIRHGFQYDELVA--NGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPR 319
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
+ LY QM G+ P+ T +L AH + +E+
Sbjct: 320 KALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 128/278 (46%), Gaps = 36/278 (12%)
Query: 83 EPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGV 141
+ + +F L+ + D +TF ++KAC G D +G+ +HG +I+ G + +
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNAL 72
Query: 142 VELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWN 201
+ +Y G +D +KVF M VRNL VSWN
Sbjct: 73 IAMYGKFGFVDAAVKVFHYMP-----VRNL--------------------------VSWN 101
Query: 202 LMISSLGKSGRDSEALRLFHEMR--DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+IS ++G + + EM ++ D AT+V VLP+CAR V +G IH A
Sbjct: 102 SIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAV 161
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
GL V V N+LVD Y KCG L A+ +F + RKN VSWN MI GL G
Sbjct: 162 KLGLSED-VRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAF 220
Query: 320 ELYEQM-IAKGVSPNKATFVGVLTCCAHAGLVEKAREL 356
L+ +M + + + N+ T + +L C + +EL
Sbjct: 221 NLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKEL 258
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 10/220 (4%)
Query: 214 SEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVD--IGQWIHSYAESSGLYRKVVSV 270
S+A+ +F ++ D F D T V+ C G++D +G+ IH GL V V
Sbjct: 12 SDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLLDVF-V 68
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIA--K 328
GNAL+ Y K G +D A VF +P +N+VSWN++ISG + NG + ++ +M+A +
Sbjct: 69 GNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEE 128
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
G+ P+ AT V VL CA V+ + L + ++ +VD+ + G + E
Sbjct: 129 GLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKL-GLSEDVRVNNSLVDMYSKCGYLTE 187
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
A ++ + R NA W +++ T G++ A + +E+
Sbjct: 188 A-QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREM 226
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 266/534 (49%), Gaps = 85/534 (15%)
Query: 21 IHAHFLRHKL----HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
IH LR + H +N ++ + CG++ E A +F R ++ +NSMI ++
Sbjct: 508 IHEDILRSGIKSNGHLANALM-NMYRRCGSIME---AQNVFEGTRARDIISWNSMIAGHA 563
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
+G E KLF +K G+ PD+ TFA +L C L +G+ +H II SG + +
Sbjct: 564 QHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVN 623
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE-- 194
+ ++ +Y CG + D +VF + HR+V+ MI GF +G+ K LF +M+
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDG 683
Query: 195 ----RSVVS---------------------------------WNLMISSLGKSGRDSEAL 217
+S S N +IS+ KSG ++A
Sbjct: 684 FKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDAR 743
Query: 218 RLF-------------------------------HEMRDQAFELDEATVVAVLPICARLG 246
++F ++M++Q L++ + V++L C+
Sbjct: 744 KVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFS 803
Query: 247 AVDIGQWIHSYAESSGLYRKV---VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
A++ G+ +H+ + RK+ V VG AL+ Y KCG L+ A+ VF KNVV+WN
Sbjct: 804 ALEEGKRVHAEI----VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWN 859
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
AMI+ A +G ++ + M +G+ P+ +TF +L+ C H+GLV + +F+S+
Sbjct: 860 AMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQ 919
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEH 423
H + P +EHYGC+V +LGR+G +EA LI M P+AA+W +LL +CR HG+V LAEH
Sbjct: 920 HGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEH 979
Query: 424 AVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A + L N YVLLSN+YA GRWDD +R M ++K PG+S IE
Sbjct: 980 AANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 1033
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 186/403 (46%), Gaps = 48/403 (11%)
Query: 21 IHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
IH+H + H S++ + + +S+ ++ A ++FN M ++ +N++I Y+
Sbjct: 407 IHSH-ISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARRE 465
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
E +KL+ +++ G+ P TF LL AC G+ +H +I+RSG + G +
Sbjct: 466 DRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLAN 525
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++ +Y CG + + VF+ RD+I N MI G + G +
Sbjct: 526 ALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA--------------- 570
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
A +LF EM+ + E D+ T +VL C A+++G+ IH
Sbjct: 571 ----------------AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLII 614
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
SGL V++GNAL++ Y +CG L A VF + +NV+SW AMI G A G
Sbjct: 615 ESGLQLD-VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAF 673
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG----LHSIVPNLEHYGC 375
EL+ QM G P K+TF +L C + +++ +++ A + L + V N
Sbjct: 674 ELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN-----A 728
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAI--WGSLLSSCRTHG 416
++ +SG + +A + M PN I W +++ +G
Sbjct: 729 LISAYSKSGSMTDARKVFDKM---PNRDIMSWNKMIAGYAQNG 768
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 194/420 (46%), Gaps = 44/420 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH+ + + + +++ G ++ A ++F+ + V+ +N+M+ Y+
Sbjct: 204 KIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKA 263
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
EE + LF + + GI PD+ T+ LL A L G+ +H + G IR+
Sbjct: 264 YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLN--SDIRV 321
Query: 140 G--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G + ++ CG + + + + RDV+V N +I + G +
Sbjct: 322 GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYE-------------- 367
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
EA +++MR ++ T ++VL C+ A+ G+ IHS+
Sbjct: 368 -----------------EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSH 410
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA-FNGRGE 316
G + V +GN+L+ Y +CG L AR +F +P+++++SWNA+I+G A RGE
Sbjct: 411 ISEVG-HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGE 469
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG-C 375
++LY+QM ++GV P + TF+ +L+ C ++ + + + L S + + H
Sbjct: 470 -AMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDI--LRSGIKSNGHLANA 526
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEP 433
++++ R G + EA ++ R + W S+++ HG E A E+ LEP
Sbjct: 527 LMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEP 585
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 174/378 (46%), Gaps = 41/378 (10%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
SNL++ +V C ++++ A ++F +M V+ +NS+I Y+ G ++ +LF ++
Sbjct: 120 SNLLINMYVK-CRSVSD---AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 175
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
G P + T+ +L AC +L G+ +H +II +G++R ++ ++ +Y C +
Sbjct: 176 TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLP 235
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
+VF + RDV+ N M+ + +K V+
Sbjct: 236 SARQVFSGIYRRDVVSYNTMLGLYAQKAYVE----------------------------- 266
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
E + LF +M + D+ T + +L +D G+ IH A + GL + VG
Sbjct: 267 --ECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL-NSDIRVGT 323
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
AL + +CG + A+ + ++VV +NA+I+ LA +G E E Y QM + GV
Sbjct: 324 ALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ T++ VL C+ + + A EL S +++ ++ + R G + A +L
Sbjct: 384 NRTTYLSVLNACSTSKAL-GAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAREL 442
Query: 393 IRSMSIRP----NAAIWG 406
+M R NA I G
Sbjct: 443 FNTMPKRDLISWNAIIAG 460
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 135/259 (52%), Gaps = 7/259 (2%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
D+ + NL+I+ + K V +F +M R V+SWN +IS + G +A +LF EM+
Sbjct: 116 DIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQ 175
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
F + T +++L C ++ G+ IHS +G Y++ V N+L++ Y KC L
Sbjct: 176 TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAG-YQRDPRVQNSLLNMYGKCEDL 234
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCC 344
+AR VF I R++VVS+N M+ A E + L+ QM ++G+ P+K T++ +L
Sbjct: 235 PSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAF 294
Query: 345 AHAGLVEKAREL--FASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA 402
++++ + + A GL+S ++ + + R G V A + + + R +
Sbjct: 295 TTPSMLDEGKRIHKLAVNEGLNS---DIRVGTALATMFVRCGDVAGAKQALEAFADR-DV 350
Query: 403 AIWGSLLSSCRTHGHVELA 421
++ +L+++ HGH E A
Sbjct: 351 VVYNALIAALAQHGHYEEA 369
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
R SE L + + + E + A V ++ C R ++ + IH+ +G+ + +
Sbjct: 62 RGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIF-LS 120
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N L++ Y KC + A VF ++PR++V+SWN++IS A G + +L+E+M G
Sbjct: 121 NLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI 180
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASM 360
P+K T++ +LT C +E +++ + +
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKI 209
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++HA ++ K+ + A +S+ CG+L E A ++F+ +V+ +N+MI AY+
Sbjct: 810 RVHAEIVKRKMQGDVRVGAALISMYAKCGSLEE---AQEVFDNFTEKNVVTWNAMINAYA 866
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC 110
+G + + + F + GI PD TF +L AC
Sbjct: 867 QHGLASKALDFFNCMDKEGIKPDGSTFTSILSAC 900
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 252/472 (53%), Gaps = 64/472 (13%)
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++++ ++ P + F+ ++ + + PD YTF +LKAC RVG VHGE +
Sbjct: 85 WNTLVRLHAAASPRRS-LLYFSRMRRVAVAPDAYTFPAVLKACGCAPGCRVGLVVHGEAV 143
Query: 128 RSGFE--------------RFGSIRIG----------------VVELYTSCGQMD----- 152
R+G + R G R G +V Y CG++D
Sbjct: 144 RTGLDADLFTRNALISFYCRIGDCRSGRKVFDHGVRDLVSWNSMVAGYVGCGEVDLAQDL 203
Query: 153 ----------------DGM-----------KVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
DG ++FD+M RD++ N MI G+ + G +D+
Sbjct: 204 FDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMPDRDLVCWNSMIDGYARHGRMDEA 263
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF EM ER+V+SW+++I + G +EAL F M + D V + CA+L
Sbjct: 264 RVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQRMLSCGIKPDRVAAVGAVAACAQL 323
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
GA++ G+W+HSY E + VV V AL+D Y KCG LD A+ +F+ +P+K+VV+WN M
Sbjct: 324 GALEQGRWLHSYLEKKKVLFDVV-VQTALIDMYVKCGRLDLAKLIFESMPKKSVVTWNVM 382
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I GL +G G ++L+ QM + + + + VLT C HAGLV + +F M
Sbjct: 383 IVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYRMEKDLG 442
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
+ P +EHYG ++D+LGR+G V +A + I +M + P +WGSLL+SCR+H VELAE +V
Sbjct: 443 LEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSLLASCRSHRCVELAELSV 502
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L +L +SG YVLLSNIYA+ G WDD +R M +KK+ G+S+IE
Sbjct: 503 ERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMSAEGMKKNIGRSVIE 554
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 250/436 (57%), Gaps = 7/436 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAP 105
+ ++ A F QM ++ +NSMI ++ G + +F+ +L++ + PD +T A
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+L AC + L +G+ +H I+ +GF+ G + ++ +Y+ CG ++ ++ ++ +D
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 166 VIVRNL--MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
+ + ++ G+ K GD+++ +F +++R VV+W MI + G EA+ LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSG-LYRKVVSVGNALVDFYCKCG 282
+ T+ A+L + + L ++ G+ IH A SG +Y VSV NAL+ Y K G
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS--VSVSNALITMYAKAG 462
Query: 283 ILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
+ +A F I ++ VSW +MI LA +G E +EL+E M+ +G+ P+ T+VGV
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
+ C HAGLV + R+ F M + I+P L HY CMVD+ GR+G ++EA + I M I P+
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMW 461
WGSLLS+CR H +++L + A + L+ LEP NSG Y L+N+Y+ G+W++A +R
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 462 MRENNVKKSPGQSLIE 477
M++ VKK G S IE
Sbjct: 643 MKDGRVKKEQGFSWIE 658
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 200/477 (41%), Gaps = 73/477 (15%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
N R +H ++ L S ++ + ++V +A K+F++M + +N+++
Sbjct: 28 NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87
Query: 73 KAYSLNGPSEEPVKLFALL---------------KNL----------------GIWPDEY 101
AYS G + + F L KN+ GI P ++
Sbjct: 88 SAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
T +L + + G+ VH I++ G S+ ++ +Y CG VFD M
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
RD+ N MI + G +D + F +M ER +V+WN MIS + G D AL +F
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 222 EM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M RD D T+ +VL CA L + IG+ IHS+ ++G + V NAL+ Y +
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGI-VLNALISMYSR 326
Query: 281 CGILDTAR---------------------------------NVFKEIPRKNVVSWNAMIS 307
CG ++TAR N+F + ++VV+W AMI
Sbjct: 327 CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIV 386
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
G +G + L+ M+ G PN T +L+ + + +++ S I
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 368 PNLEHYGCMVDVLGRSGCV---REAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
++ ++ + ++G + A+DLIR + W S++ + HGH E A
Sbjct: 447 -SVSVSNALITMYAKAGNITSASRAFDLIRC---ERDTVSWTSMIIALAQHGHAEEA 499
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N ++ Y K G +D+ F ++P+++ VSW MI G G+ + + M+ +G+
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P + T VL A +E +++ + + L + N+ ++++ + G A
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKL-GLRGNVSVSNSLLNMYAKCGDPMMAKF 202
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNS 436
+ M +R + + W ++++ G ++LA +++ ++ WNS
Sbjct: 203 VFDRMVVR-DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 257/531 (48%), Gaps = 71/531 (13%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
HL +HAH + + + + V + + + YA K+F+ M +L+N+MI
Sbjct: 126 HLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
N ++ ++LF + G+ D T +L A + +L+VG + ++ GF
Sbjct: 186 KNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDY 245
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI----------------------- 173
+ G++ LY+ CG ++ +F ++ D+I N MI
Sbjct: 246 VLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSG 305
Query: 174 ---------------------------HGFCKKG--------------------DVDKGL 186
HGFC K ++D
Sbjct: 306 ERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLAR 365
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+LF E E++VV+WN MIS ++G A+ LF EM F + T+ +L CA+LG
Sbjct: 366 HLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLG 425
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
++ G+W+H +S L + V ALVD Y KCG + A +F + KN V+WN MI
Sbjct: 426 SLSFGKWVHHLIKSENLEPNIY-VSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMI 484
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
G +G G ++LY +M+ G +P+ TF+ VL C+HAGLV + E+F +M + I
Sbjct: 485 FGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRI 544
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P +EHY CMVD+LGRSG + +A + I+ M + P A+WG+LL +C H ++A A +
Sbjct: 545 EPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASE 604
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L L+P + G YVLLSNIY+ + A ++R +++ + KSPG +LIE
Sbjct: 605 RLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIE 655
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 32/288 (11%)
Query: 9 LHGRNTRTHLT-QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
LH HL IH ++ + + + F ++ LNEI A +F++ +V+
Sbjct: 319 LHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVA 378
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N+MI Y+ NG +E + LF + P+ T +L AC +G L G+ VH I
Sbjct: 379 WNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIK 438
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
E + +V++Y CG + + ++FD MS ++ + N MI G+
Sbjct: 439 SENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGY----------- 487
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
G G EAL+L++EM + T ++VL C+ G
Sbjct: 488 --------------------GLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGL 527
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
V G+ I + ++ +VD + G L+ A K++P
Sbjct: 528 VGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMP 575
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLF-HEMRDQAFELDEATVVAVLPICARLG 246
LF + + + +N+++ + S ++ L+ H R+ D T + C+
Sbjct: 66 LFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDK 125
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
+ +H+++ G Y V VG+ALVD YCK + AR VF +P ++ V WN MI
Sbjct: 126 HL---MLLHAHSIIDG-YGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMI 181
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+GL N + ++L+ +M+A GV + +T VL A + +EL M G+ +
Sbjct: 182 NGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA------ELQELKVGM-GIQCL 234
Query: 367 VPNLEHYGC------MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ C ++ + + G V A L R ++ RP+ + +++S +G E
Sbjct: 235 ALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRIN-RPDLIAYNAMISGFTANGGTEC 293
Query: 421 AEHAVKELI 429
+ +EL+
Sbjct: 294 SVKLFRELL 302
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 225/386 (58%), Gaps = 6/386 (1%)
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
L I PD F LL+AC D+R H IIR G+ SI ++ Y +C Q++
Sbjct: 5 LKILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNL 64
Query: 154 GMKVFDEMSHRDVIVR--NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
+V ++ V + NL+I F + G+ + +F +M +R VV+WN MI ++G
Sbjct: 65 AYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNG 124
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+ EALR F M E D+ T +V+ CARLGA++ QW+H + + +
Sbjct: 125 KFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFI-LS 183
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
+AL+D Y KCG ++TA+ VF+ + R +V WN++I+GLA +G + ++ +M A+ V
Sbjct: 184 SALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVL 243
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P+ TF+G+L C+H GLV++ R+ F M +SI P LEHYG MVD+LGR+G + EAY
Sbjct: 244 PDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYA 303
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+I +M + P+ +W LLS+CRTH + EL E AV N+ SG+YVLLSNIY R
Sbjct: 304 MITAMPMEPDVIVWRILLSACRTHRNTELGEVAVA---NISGPKSGDYVLLSNIYCSQNR 360
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WD+A+ +R M+E V+K G+S E
Sbjct: 361 WDNAQEVREMMKEEGVRKRRGKSWFE 386
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 40/306 (13%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
NL++ F+ + E + A K+F +M + V+ +NSMI Y NG EE ++ F + +
Sbjct: 83 NLVIDSFMRI----GEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLS 138
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ PD++TFA ++ AC +G L Q +H +++ E + ++++Y+ CG+++
Sbjct: 139 SNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIET 198
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
+VF+ + DV V N +I+G G + +F +M +V+
Sbjct: 199 AKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLP-------------- 244
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
D T + +L C+ G V G+ E+ + + A
Sbjct: 245 -----------------DSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGA 287
Query: 274 LVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
+VD + G+LD A + +P + +V+ W ++S + ELG E +A P
Sbjct: 288 MVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELG----EVAVANISGP 343
Query: 333 NKATFV 338
+V
Sbjct: 344 KSGDYV 349
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H +H ++ ++ + ++ + + + I+ A ++F + V ++NS+I +
Sbjct: 163 HAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLA 222
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGF 131
++G + + + +F+ ++ + PD TF +LKAC G ++ G+ + I+
Sbjct: 223 VHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQL 282
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMI 173
E +G++ V+L G +D+ + M DVIV +++
Sbjct: 283 EHYGAM----VDLLGRAGLLDEAYAMITAMPMEPDVIVWRILL 321
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 264/470 (56%), Gaps = 17/470 (3%)
Query: 15 RTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+TH I + H + + L+ ++ C +L+ YA K+F+Q+ P + ++N+MIKA
Sbjct: 34 QTHAQLITTALISHPVSANKLLK---LAACASLS---YAHKLFDQIPQPDLFIYNTMIKA 87
Query: 75 YSLNGPS--EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+SL+ S + +L ++LG++P+ Y+F AC ++ G+ V ++ G E
Sbjct: 88 HSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLE 147
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ ++ +Y G + + KVF RD+ N +I + G++ LF M
Sbjct: 148 NNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGM 207
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
RER VVSW+ +I+ + G EAL FH+M + +E T+V+ L C+ L A+D G+
Sbjct: 208 RERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGK 267
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAF 311
WIH+Y G + + +++D Y KCG +++A VF E ++ V WNAMI G A
Sbjct: 268 WIHAYI-GKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAM 326
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+G + ++EQM + +SPNK TF+ +L C+H +VE+ + F M ++I P +E
Sbjct: 327 HGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIE 386
Query: 372 HYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINL 431
HYGCMVD+L RSG ++EA D+I SM + P+ AIWG+LL++CR + +E + + +
Sbjct: 387 HYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGM 446
Query: 432 EPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV----KKSPGQSLIE 477
+P + G +VLLSNIY+ GRW++A LR +N + KK PG S IE
Sbjct: 447 DPNHIGCHVLLSNIYSTSGRWNEARILR---EKNEISRDRKKIPGCSSIE 493
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 263/486 (54%), Gaps = 20/486 (4%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHF---------VSVCGTLNE--IK 51
R++ + RN + + + + + ++ + H V + G L E +
Sbjct: 106 RRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVD 165
Query: 52 YATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL 111
A K+F+ M V+ +MI Y G +E LF + + T+ ++
Sbjct: 166 DARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV----VTWTAMVSGYA 221
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
G + V + + + + ++ +G YT G+M + +FD M + V+V N
Sbjct: 222 RNGKVDVARKLFEVMPERNEVSWTAMLLG----YTHSGRMREASSLFDAMPVKPVVVCNE 277
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
MI GF G+VDK +F+ M+ER +W+ MI + G + EAL LF M+ + L+
Sbjct: 278 MIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALN 337
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
++++VL +C L ++D G+ +H+ S + + + V + L+ Y KCG L A+ VF
Sbjct: 338 FPSLISVLSVCVSLASLDHGKQVHAQLVRSE-FDQDLYVASVLITMYVKCGNLVRAKQVF 396
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
P K+VV WN+MI+G + +G GE + ++ M + GV P+ TF+GVL+ C+++G V+
Sbjct: 397 NRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ ELF +M + + P +EHY C+VD+LGR+ V EA L+ M + P+A +WG+LL +
Sbjct: 457 EGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CRTH ++LAE AV++L LEP N+G YVLLSN+YA GRW D E LR ++ +V K P
Sbjct: 517 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLP 576
Query: 472 GQSLIE 477
G S IE
Sbjct: 577 GCSWIE 582
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 50/278 (17%)
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
G++ + G + + +VFD M R+V+ M+ G+ + GDV + LF M ++VVS
Sbjct: 91 GLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVS 150
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
W +M+ L + GR +A +LF M +
Sbjct: 151 WTVMLGGLLQEGRVDDARKLFDMMPE---------------------------------- 176
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
+ VV+V N ++ YC+ G LD AR +F E+P++NVV+W AM+SG A NG+ ++
Sbjct: 177 -----KDVVAVTN-MIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVAR 230
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
+L+E M + N+ ++ +L H+G + +A LF +M +V N M+
Sbjct: 231 KLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNE-----MIMG 281
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
G +G V +A + + M R N W +++ G+
Sbjct: 282 FGLNGEVDKARRVFKGMKERDNGT-WSAMIKVYERKGY 318
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 243/458 (53%), Gaps = 51/458 (11%)
Query: 47 LNEIKYATKIF--NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
L + YA IF M NP V N+MI+AY+ + + + L+ + I D + +
Sbjct: 53 LGSLVYAQAIFEDTTMDNPFVC--NTMIRAYAKSVFPIKAIYLYNFMHRKDIKSDHFMYP 110
Query: 105 PLLKACLGV-----GDLRVGQC--------VHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
LKAC V GD++ Q +H + R G ++ I+ +V LY+ CG +
Sbjct: 111 FGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFL 170
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYL----------------------- 188
D +VFDEM+ + + N+MI + + D D L
Sbjct: 171 DLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIRLG 230
Query: 189 --------FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
F+EM ER VSWN MI+ + + AL LF EM E + T+++VL
Sbjct: 231 KIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIANVEATDITLISVLG 290
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA GA++IG+ IH + Y+ + NALVD Y KCG L+ A VF E+ K++
Sbjct: 291 ACAETGALEIGRKIHLSLKQRE-YKIEGYLSNALVDMYAKCGHLNLAWEVFSELKMKHIS 349
Query: 301 SWNAMISGLAFNGRGELGVELYE--QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
WNAMI LA +G E + L+ +M G PN+ TF+GVL C+H GLV++ R+ F
Sbjct: 350 CWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEGRKFFN 409
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
M + I+P+++HYGCMVD+L R G ++EA+ +I++M N+ +W +LL +CR H HV
Sbjct: 410 RMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHV 469
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAE 456
+LAE + ++L +EP G+YVLLSNIYAE RW+D E
Sbjct: 470 DLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVE 507
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 270/548 (49%), Gaps = 80/548 (14%)
Query: 5 ILRLLHGRNTRTHLTQIHA------HFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFN 58
+L L + +H Q HA H L SNL+L SV G A +F
Sbjct: 13 LLSRLRACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAIASVPGA---APLADAVFA 69
Query: 59 QMRNPSV---LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
++ P+ +N+ I+ ++ P + FA +++ G+ PD YTF +LKAC
Sbjct: 70 RLPEPAARDPFPWNTAIRLHAPGRP-RAALLYFARMRSCGVRPDAYTFPAVLKACGCAPG 128
Query: 116 LRVGQCVHGEIIRSG---------------------------FERFGSIRIGVVEL---- 144
R G VH E +R G F+ G + +V
Sbjct: 129 CRAGLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMV 188
Query: 145 --YTSCGQM---------------------------------DDGMKVFDEMSHRDVIVR 169
Y CG+M D ++FD+M+ RD++
Sbjct: 189 AGYVGCGEMGLAQELFDEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCW 248
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N MI G+ + G +D+ LF EM ER+V+SW+++I + G EAL F M
Sbjct: 249 NSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIR 308
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
D V + CA+LGA++ G+W+HSY E + VV V AL+D Y KCG +D A
Sbjct: 309 PDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVV-VQTALIDMYMKCGRMDLAML 367
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
+F+ +P ++VV+WN MI GL +G G V L+ +M A+ V+ + + + +LT C HAGL
Sbjct: 368 IFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGL 427
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V + E+F M I P +EHYG +VD+LGR+G + +A I +M + P +WGSLL
Sbjct: 428 VSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLL 487
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
++CR+H VELAE +V+ L NL +SG YVLLSNIYA+ G W D +R M + ++K
Sbjct: 488 AACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRK 547
Query: 470 SPGQSLIE 477
G+S+IE
Sbjct: 548 DIGRSVIE 555
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 273/533 (51%), Gaps = 80/533 (15%)
Query: 20 QIHAHFLRHKLHQS----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
++HA L+ + + N +L+ + CG+L + A ++F+ +R+ +++ + +MI+A+
Sbjct: 68 EVHAAILKSGIQPNRYLENTLLSMYAK-CGSLTD---ARRVFDSIRDRNIVSWTAMIEAF 123
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE--- 132
+ E K + +K G PD+ TF LL A L++GQ VH EI+ +G E
Sbjct: 124 VAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEP 183
Query: 133 RFGSIRIG----------------------------VVELYTSCGQMDDGMKVFDEMS-- 162
R G+ +G ++ Y GQ+D +++ + M
Sbjct: 184 RVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQA 243
Query: 163 ----------------------------HRDVI---------VRNLMIHGFCKKGDVDKG 185
HR +I V N +I +CK G +++
Sbjct: 244 EVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEA 303
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
LF ++ R VV+W M++ + G EA+ LF M+ Q + D+ T +VL C+
Sbjct: 304 RKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSP 363
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
+ G+ IH +G Y V + +ALV Y KCG +D A VF ++ +NVV+W A+
Sbjct: 364 AFLQEGKRIHQQLVHAG-YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAI 422
Query: 306 ISGL-AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLH 364
I+G A +GR +E ++QM +G+ P+K TF VL+ C H GLVE+ R+ F SM +
Sbjct: 423 ITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDY 482
Query: 365 SIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHA 424
I P +EHY C VD+LGR+G + EA ++I SM P ++WG+LLS+CR H VE E A
Sbjct: 483 GIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERA 542
Query: 425 VKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ ++ L+P + G YV LS+IYA GR++DAE +R M + +V K PGQS IE
Sbjct: 543 AENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 595
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 182/413 (44%), Gaps = 70/413 (16%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCG 149
+L+ ++ D F LL+ C + L G+ VH I++SG + + ++ +Y CG
Sbjct: 39 ILQGTRVYSD--VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG 96
Query: 150 QMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGK 209
+ D +VFD +R+R++VSW MI +
Sbjct: 97 SLTDARRVFD-------------------------------SIRDRNIVSWTAMIEAFVA 125
Query: 210 SGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
++ EA + + M+ + D+ T V++L + +GQ +H +GL +
Sbjct: 126 GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELE-PR 184
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
VG +LV Y KCG + AR +F +P KNVV+W +I+G A G+ ++ +EL E M
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARE----------------------LFASMTGLH--- 364
V+PNK TF +L C +E ++ ++ GL
Sbjct: 245 VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR 304
Query: 365 SIVPNLEH-----YGCMVDVLGRSGCVREAYDLIRSMS---IRPNAAIWGSLLSSCRTHG 416
+ +L H + MV + G EA +L R M I+P+ + S+L+SC +
Sbjct: 305 KLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPA 364
Query: 417 HVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAETLRMWMRENNV 467
++ + ++L++ +N Y+ L ++YA+ G DDA + M E NV
Sbjct: 365 FLQEGKRIHQQLVH-AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 34/249 (13%)
Query: 204 ISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
+S L K+GR EAL + + M Q + +L CARL +++ G+ +H+ SG+
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
+ + N L+ Y KCG L AR VF I +N+VSW AMI + + YE
Sbjct: 79 -QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 324 QMIAKGVSPNKATFVGVLTCCA-----------HAGLVEKARELF----ASMTGLHSIVP 368
M G P+K TFV +L H +VE EL S+ G+++
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197
Query: 369 NLEHYGCMVDVL---------------GRSGCVREAYDLIRSMS---IRPNAAIWGSLLS 410
++ + D L + G V A +L+ +M + PN + S+L
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257
Query: 411 SCRTHGHVE 419
C T +E
Sbjct: 258 GCTTPAALE 266
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/386 (39%), Positives = 224/386 (58%), Gaps = 6/386 (1%)
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
LGI D +L+AC D R H +II+ G+ + S+ +V Y C +D
Sbjct: 14 LGILSDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDL 73
Query: 154 GMKVFDEMSH--RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
++ DEM + D+I NL+I K G+ D +FR+M R VV+WN MI ++
Sbjct: 74 AHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNE 133
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
R EALR F EM + E D T +V+ CARLG+ + +H + + +
Sbjct: 134 RFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFI-LS 192
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
+AL+D Y KCG ++TA+ VF I +V WN+MI+GLA +G + ++ QM + VS
Sbjct: 193 SALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVS 252
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
P+ TF+G+LT C+H GLVE+ R F M +SI P LEHYG MVD+LGR+G V EAY
Sbjct: 253 PDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYA 312
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+I++M + P+ IW +LLS+CR + EL E A+ ++ +L NSG+Y+LLSN+Y +
Sbjct: 313 MIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHL---NSGDYILLSNMYCSLEK 369
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WD AE +R M+ + V+K+ G+S +E
Sbjct: 370 WDSAERVREMMKRDGVRKNRGRSWVE 395
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 40/307 (13%)
Query: 33 SNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLK 92
+NLI+A + V E +A ++F +M V+ +NSMI N EE ++ F +
Sbjct: 91 ANLIIASLMKV----GEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREML 146
Query: 93 NLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMD 152
N + PD +TFA ++ C +G + VHG +I + + +++LY+ CG+++
Sbjct: 147 NSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRIN 206
Query: 153 DGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGR 212
KVF+ + H DV V N MI+G L G
Sbjct: 207 TAKKVFNSIQHDDVSVWNSMING-------------------------------LAIHGL 235
Query: 213 DSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
+A+ +F +M ++ D T + +L C+ G V+ G+ + +
Sbjct: 236 ALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYG 295
Query: 273 ALVDFYCKCGILDTARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
A+VD + G+++ A + K +P + ++V W A++S ELG E IAK
Sbjct: 296 AMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELG----EVAIAKISH 351
Query: 332 PNKATFV 338
N ++
Sbjct: 352 LNSGDYI 358
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILA----HFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMI 72
H +H + K+ Q N IL+ S CG +N A K+FN +++ V ++NSMI
Sbjct: 172 HAELVHGLMIEKKI-QLNFILSSALIDLYSKCGRINT---AKKVFNSIQHDDVSVWNSMI 227
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+++G + + + +F+ ++ + PD TF +L AC G + G+
Sbjct: 228 NGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGR 275
>gi|242038163|ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
gi|241920330|gb|EER93474.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
Length = 599
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 256/471 (54%), Gaps = 3/471 (0%)
Query: 2 ERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
E+ L LL + Q+HAH + H + + + +++ A +F
Sbjct: 127 EQTFLALLRSVERLSAGRQVHAHVVVSGFHSRVYLRNSLIKMYIDAGDVETAELMFRSAL 186
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ N M+ Y G S + + F + + GI D YT LL C + + +G+
Sbjct: 187 VLDTVSCNIMLSGYVNEGCSLKALCFFRDMASRGIVADRYTAVALLTCCGRLKTVLLGRS 246
Query: 122 VHGEIIR--SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG I+R + + + ++++Y CG+M+ +VF E S +D I N M+ GF
Sbjct: 247 VHGVIVRRMDAGDNWLILVNALLDMYAKCGRMNAAERVFGEASEKDGISWNTMVSGFANA 306
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G +D F E R ++SWN +++ + +E ++LFH+M D+ T V ++
Sbjct: 307 GMLDLASRFFSEAPSRDLISWNALLAGYARYKGFNEVMKLFHDMLASCVNPDKVTAVTLI 366
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+ A G+++ + IH + ++ + +ALVD +CKCG + A VF++ K+V
Sbjct: 367 SVAAGKGSLNHAKSIHGWVVKQFGHQDAF-LASALVDMHCKCGNVKVAYYVFEKALDKDV 425
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
W AMISGLAFNG G +EL+ +M + ++PN T + VL+ C+HAGL+++ + +
Sbjct: 426 TLWTAMISGLAFNGHGTEALELFWKMQTEAIAPNGVTLLAVLSACSHAGLLDEGCRILDA 485
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M +SI P +EH+GCMVD+L RSG + +A L R M +RP+ +IWGS+L++ + E
Sbjct: 486 MKQKYSIEPGIEHFGCMVDLLARSGKLIDALALARRMPMRPSRSIWGSILNASLAGQNTE 545
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKS 470
+AE A KEL+ L+P + G YVLLSN+YA GG W+ ++ +R M+ VKKS
Sbjct: 546 VAEIASKELLRLDPEDEGGYVLLSNLYAAGGHWNHSDEVRQNMKRKGVKKS 596
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/500 (32%), Positives = 266/500 (53%), Gaps = 43/500 (8%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
++HA + + NLI ++ +++ T ++ A K+F+++ ++ + ++I + G
Sbjct: 50 KLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCG 109
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFA--PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ +++F+ ++ L F +LKAC VGD G+ VH +++ FE +
Sbjct: 110 FHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFV 169
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---- 193
++ +Y+ CG++ D KVFD M +D++ N ++ G+ ++G ++ L L M+
Sbjct: 170 SSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGV 229
Query: 194 -----------------------------------ERSVVSWNLMISSLGKSGRDSEALR 218
E VVSW ++S ++ R+ EA
Sbjct: 230 NPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFD 289
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
F +M F AT+ A+LP CA V G+ IH YA G+ + V +ALVD Y
Sbjct: 290 AFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLY-VRSALVDMY 348
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATF 337
KCG + AR +F ++P KN V+ N+MI G A +G E +EL+ QM +GV + TF
Sbjct: 349 AKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTF 408
Query: 338 VGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS 397
LT C+H G +E + LF M + I P LEHY CMVD+ GR+G + EAY +I+SM
Sbjct: 409 TAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMP 468
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAET 457
++P+ +WG+LL++CR HGHVELAE A K L LEP ++GN +LLS++YA+ G W E
Sbjct: 469 VKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVER 528
Query: 458 LRMWMRENNVKKSPGQSLIE 477
++ +++ ++K G S I+
Sbjct: 529 IKRRIKKGKLRKLQGLSWID 548
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 162/375 (43%), Gaps = 45/375 (12%)
Query: 102 TFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
++A L++ L+ G+ +H + +G+ RF I ++ LYT+CGQ+ K+FD++
Sbjct: 31 SYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKI 90
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
+ IH W +I++ + G AL +F
Sbjct: 91 PQTN-------IH------------------------RWIALIATCARCGFHDHALEVFS 119
Query: 222 EMRDQAFELDEATVV--AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
EM+ + + V +VL C +G G+ +H + V +AL+ Y
Sbjct: 120 EMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCS-FEIDAFVSSALIVMYS 178
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG + AR VF + K++V+ NA++SG A G + L E M GV+PN T+
Sbjct: 179 KCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNA 238
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+++ A E E+F M + P++ + ++ ++ EA+D + M +
Sbjct: 239 LISGFAQKCDREMVSEIFRLMNE-DRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLL 297
Query: 400 ---PNAAIWGSLLSSCRTHGHVELAE--HAVKELINLEPWNSGNYV--LLSNIYAEGGRW 452
P +A +LL +C T V + H +I +E YV L ++YA+ G
Sbjct: 298 GFCPTSATISALLPACATEARVRFGKEIHGYALVIGVE---DDLYVRSALVDMYAKCGFI 354
Query: 453 DDAETLRMWMRENNV 467
+A TL M E N
Sbjct: 355 SEARTLFYKMPEKNT 369
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 249/433 (57%), Gaps = 5/433 (1%)
Query: 47 LNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPL 106
L A K+F++M + +++++N MI+ Y G + L ++ G+ PD+ T
Sbjct: 94 LGRADVARKLFDEMPHRALVVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTS 153
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
+ C GDL +G+ +H + G F + ++++Y G +++ +K+F++M R+
Sbjct: 154 VTVCSRAGDLSLGRRIHAYM--DGVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRN 211
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+I +++ G+ G +DK LF + E+ ++ W MI++ + G EAL LF EM+
Sbjct: 212 IISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQM 271
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
Q E D T+V +L CA LGA+D G+WIH +A + V +G AL+D Y KCG +
Sbjct: 272 QRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAV-LGTALIDMYAKCGHVK 330
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
+ VF+++ ++ +W ++I GLA NG+ +EL+E M V P+ TF+GVL+ C
Sbjct: 331 KSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACC 390
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNA-AI 404
H GLV++ R+ F +M ++ I P +EHY C+V++LGR+G + EA LIR + I +A +
Sbjct: 391 HGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPL 450
Query: 405 WGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRE 464
+G+LL++C+ G+VE++E K + +L+SN+YA RW+DA +R M
Sbjct: 451 FGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRSKMAH 510
Query: 465 NNVKKSPGQSLIE 477
+KK+ G SLIE
Sbjct: 511 PTIKKTAGCSLIE 523
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 198/460 (43%), Gaps = 107/460 (23%)
Query: 69 NSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV-GQCVHGEII 127
N +I+ + G + ++ L+ G+ D +T+ +L+A +GV L V G+ H +
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRA-IGVLKLSVEGRKAHAAAM 73
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
++GF ++++YT G+ D K+FDEM HR ++V N+MI +
Sbjct: 74 KTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYV---------- 123
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
+ GR + A+ L EM D+ T+V + +C+R G
Sbjct: 124 ---------------------RCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGD 162
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
+ +G+ IH+Y + G++ + V NAL+D Y K G L+ A +F+++P +N++SW ++S
Sbjct: 163 LSLGRRIHAYMD--GVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVS 220
Query: 308 GLAFNGR-------------------------------GELGVELYEQMIAKGVSPNKAT 336
G AF G+ E + L+ +M + V P++ T
Sbjct: 221 GYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFT 280
Query: 337 FVGVLTCCAHAGL-----------------------------------VEKARELFASMT 361
V +LTCCA+ G V+K+ E+F M
Sbjct: 281 IVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQ 340
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
G + C + G++G E ++ + ++P++ + +LS+C G V+
Sbjct: 341 GRDTTA--WTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEG 398
Query: 422 E---HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
HA+K++ + P +Y L N+ G D+AE L
Sbjct: 399 RKQFHAMKDVYRIPP-RIEHYSCLVNLLGRAGLLDEAEKL 437
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH + K+ ++ + + +K + ++F QM+ + S+I + NG
Sbjct: 300 IHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQ 359
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR-- 138
+ ++LF ++ + PD TF +L A C HG ++ G ++F +++
Sbjct: 360 AGRALELFEDMERSKVKPDSITFIGVLSA-----------CCHGGLVDEGRKQFHAMKDV 408
Query: 139 ----------IGVVELYTSCGQMDDGMKVFDEMS-HRDVIVRNLMIHGFCK-KGDVDKGL 186
+V L G +D+ K+ ++ ++D + + CK +G+V+
Sbjct: 409 YRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSE 468
Query: 187 YLFREMRER--SVVSWNLMISSL-GKSGRDSEALRLFHEM 223
L + + E+ + NL++S++ + R +A+R+ +M
Sbjct: 469 RLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRSKM 508
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 240/430 (55%), Gaps = 32/430 (7%)
Query: 48 NEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLL 107
+ I+ + ++F M+ + + +MI ++ NG E + LF ++ + D+YTF +L
Sbjct: 222 SRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVL 281
Query: 108 KACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI 167
AC GV L+ G+ VH IIR+ ++ ++
Sbjct: 282 TACGGVMALQEGKQVHAYIIRTDYQD-------------------------------NIF 310
Query: 168 VRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
V + ++ +CK + +FR+M ++VVSW M+ G++G EA+++F +M++
Sbjct: 311 VGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNG 370
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
E D+ T+ +V+ CA L +++ G H A SGL ++V NALV Y KCG ++ +
Sbjct: 371 IEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI-SFITVSNALVTLYGKCGSIEDS 429
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+F E+ + VSW A++SG A G+ + L+E M+A G P+K TF+GVL+ C+ A
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
GLV+K ++F SM H I+P +HY CM+D+ R+G + EA I M P+A W S
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549
Query: 408 LLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNV 467
LLSSCR H ++E+ + A + L+ LEP N+ +Y+LLS+IYA G+W++ LR MR+ +
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609
Query: 468 KKSPGQSLIE 477
+K PG S I+
Sbjct: 610 RKEPGCSWIK 619
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 221/437 (50%), Gaps = 43/437 (9%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM--RN--- 62
L H R+T+ +IH H ++ + +L + VS + I YA ++F+QM RN
Sbjct: 22 LKHCRDTK----KIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYS 77
Query: 63 ------------------------PS--VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
P+ ++ +NS+I AY+ G + VK + L+ G
Sbjct: 78 WNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGP 137
Query: 97 WP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ + + +L G + +G VHG +++ GF+ + + +V++Y+ G +
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+ FDEM ++V++ N +I G + ++ LF +M+E+ +SW MI+ ++G D E
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A+ LF EMR + E+D+ T +VL C + A+ G+ +H+Y + Y+ + VG+ALV
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD-YQDNIFVGSALV 316
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
D YCKC + +A VF+++ KNVVSW AM+ G NG E V+++ M G+ P+
Sbjct: 317 DMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDF 376
Query: 336 TFVGVLTCCAHAGLVEKARELF--ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
T V++ CA+ +E+ + A ++GL S + +V + G+ G + +++ L
Sbjct: 377 TLGSVISSCANLASLEEGAQFHCRALVSGLISFITV---SNALVTLYGKCGSIEDSHRLF 433
Query: 394 RSMSIRPNAAIWGSLLS 410
MS + W +L+S
Sbjct: 434 SEMSYVDEVS-WTALVS 449
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 162/362 (44%), Gaps = 44/362 (12%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS 162
+ LLK C R + +H II++ + +V Y ++ +VFD+M
Sbjct: 18 YCELLKHC------RDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
R++ N ++ + K + + +F M R +VSWN +IS+ G ++++ ++
Sbjct: 72 QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131
Query: 223 M-RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKC 281
M + F L+ + +L + ++ G V +G +H + G ++ V VG+ LVD Y K
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFG-FQSYVFVGSPLVDMYSKT 190
Query: 282 GILDTARNVFKEIPRKNVV-------------------------------SWNAMISGLA 310
G++ AR F E+P KNVV SW AMI+G
Sbjct: 191 GLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFT 250
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNL 370
NG ++L+ +M + + ++ TF VLT C +++ +++ A + N+
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYQDNI 309
Query: 371 EHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN 430
+VD+ + ++ A + R M+ + N W ++L +G+ +E AVK +
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVGYGQNGY---SEEAVKIFCD 365
Query: 431 LE 432
++
Sbjct: 366 MQ 367
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 247/448 (55%), Gaps = 5/448 (1%)
Query: 32 QSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL 91
+S ++ V++ ++ A +F+ + + +MI + N E + +F+ +
Sbjct: 201 RSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDM 260
Query: 92 KNLGIWP-DEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ G WP DE ++ AC ++ G+ HG ++R+G +++ ++ +Y+SC
Sbjct: 261 REEG-WPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLD 319
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
+ ++FD D N MI G+ K G V+ LF M ++ VSW+ MI+ ++
Sbjct: 320 VVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQN 379
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
+ SEAL +F MR + DE T+V+V+ C L A++ G+ +H Y Y + +
Sbjct: 380 NQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQ-YNITIVL 438
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
G +L+D Y KCG ++ A VF + K WNA+I GLA NG ++++ +M G+
Sbjct: 439 GTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGI 498
Query: 331 S-PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
+ P++ TF GVL+ C H GLVE+ R+ F M + I+PN+ HYGCMVD+LGR+G VREA
Sbjct: 499 AVPSEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREA 558
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
DLI+SM + P+ WG+LL +C H E+ E K+L+ L+P + G +LSNIYA
Sbjct: 559 EDLIQSMPMSPDVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASE 618
Query: 450 GRWDDAETLRMWMRENNVKKSPGQSLIE 477
G W + LR M++ +V K G S++E
Sbjct: 619 GMWQCVKDLRGSMKQ-HVAKVAGCSVVE 645
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 183/412 (44%), Gaps = 74/412 (17%)
Query: 12 RNTRTHLTQIHAHFLRHKL-----HQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNPS 64
R+ R HL +IHA FL L S L+L + L + ++ ++F +R+P+
Sbjct: 15 RSAR-HLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLPQPLHHSLQLFRLVRSPN 73
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
N++I+A G P F L ++ PD YT L AC GD R G+ VH
Sbjct: 74 AFTCNTLIRAALRQGL---PHLCFPLYASMPAAPDTYTHPLLAAACAARGDAREGRQVHS 130
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++ GF +R ++ +Y++CG + +VFD D + N ++ + + GDV++
Sbjct: 131 HAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILATYVRDGDVEQ 190
Query: 185 GLYLFREMRERSVV-------------------------------SWNLMISSLGKSGRD 213
+ +F M ERS +W MIS ++
Sbjct: 191 AVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLF 250
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL +F +MR++ + +DEA +V+V+ CA+ + G+ H +GL + V+V NA
Sbjct: 251 VEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSR-VNVQNA 309
Query: 274 LVDFYCKC-------------------------------GILDTARNVFKEIPRKNVVSW 302
L+ Y C G ++ A+ +F +P K+ VSW
Sbjct: 310 LIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSW 369
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+AMI+G N + + +++ M A + P++ T V V++ C + +E+ +
Sbjct: 370 SAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGK 421
>gi|116309337|emb|CAH66421.1| H0622F05.4 [Oryza sativa Indica Group]
gi|116309402|emb|CAH66479.1| OSIGBa0137L20.8 [Oryza sativa Indica Group]
Length = 545
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 257/521 (49%), Gaps = 64/521 (12%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q+HA +R LH + +LA F + C TL+ + + V L N+++ + +
Sbjct: 25 LAQLHARIVRLGLHNHHALLARFAAACDTLSCPSVVASLLSVAV--PVRLRNAVLASLAR 82
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ P + + F LL+ PD ++F PLL AC L G +H IR G + +
Sbjct: 83 HAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTGASLHAAAIRLGVDADLFV 142
Query: 138 RIGVVELYTSCG-------------------------------QMDDGMKVFDEMSHRDV 166
R +++ Y CG + ++FD++ HR+V
Sbjct: 143 RTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNSGDILTARELFDQIPHRNV 202
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERS------------------------------ 196
+ N M+ G+ K GD++ LF EM ER+
Sbjct: 203 VHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYLNAGNMGAARTLFDKLEDR 262
Query: 197 -VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ +W+ MIS ++G EALR+F+E + Q DE +V ++ C++LG + + +WI
Sbjct: 263 DLFAWSTMISGCAQNGYPGEALRIFNEFQKQEICPDELVIVGLMSACSQLGNITLARWIE 322
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + V V L++ KCG ++ A +F+ + ++V S+ +M+ G +G
Sbjct: 323 GYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVRDVFSYCSMMQGHCLHGSA 382
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
VEL+ QM+ +G++P+ A F VLT C+HAGLVE+ + F M + IVP+ +HY C
Sbjct: 383 SKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYFDMMKNEYMIVPSGDHYAC 442
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+V +LGR G +R+AY+LI+SM P+ WG+LL C+ H +EL + A K+L +EP N
Sbjct: 443 LVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKIAAKKLFEIEPEN 502
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+GNYV LSNIYA RW + R M + K G +L+
Sbjct: 503 AGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCTLV 543
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/319 (45%), Positives = 202/319 (63%), Gaps = 7/319 (2%)
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREM-RERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
DV+ N ++ + K GD L FR M +++V+WN MIS+ ++G EAL LF EM
Sbjct: 198 DVVACNALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREM 257
Query: 224 RDQ-----AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFY 278
Q + D+AT VAVL CARLGA+D G+W+H+Y +G VGNAL+D Y
Sbjct: 258 LQQQGCTSSPLPDDATFVAVLGACARLGALDAGRWVHAYIVRTGRDAAAGVVGNALIDMY 317
Query: 279 CKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFV 338
KCG ++ A VF + R++V ++ +MISGLA +GRGE + L+ M V PN+ TF+
Sbjct: 318 AKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAMHGRGEEALALFGDMRQARVRPNEVTFL 377
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
GVL+ C HAG +E F +M LH + P +EHYGC+VD+LGR+G + EA +L+ M I
Sbjct: 378 GVLSACCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAGRLDEAEELVSVMPI 437
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
RP+A IWGSLL++CR HGHV+ AE ++ + E ++G+YVL+SN+YA+ GR A +
Sbjct: 438 RPDAIIWGSLLAACRAHGHVDRAERVMRRMAEDED-DAGDYVLMSNMYAQEGRHGKAVQV 496
Query: 459 RMWMRENNVKKSPGQSLIE 477
R MR V K PG SLIE
Sbjct: 497 RRQMRRGKVDKVPGCSLIE 515
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 41/270 (15%)
Query: 53 ATKIFNQM-RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGI----WPDEYTFAPL 106
A + F M +++ +N+MI A++ G +E ++LF +L+ G PD+ TF +
Sbjct: 218 ALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREMLQQQGCTSSPLPDDATFVAV 277
Query: 107 LKACLGVGDLRVGQCVHGEIIRSGFERF-GSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
L AC +G L G+ VH I+R+G + G + ++++Y CG ++ +VFD M+ RD
Sbjct: 278 LGACARLGALDAGRWVHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVFDAMTRRD 337
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V MI G G ++ L LF +MR+ V
Sbjct: 338 VYTYTSMISGLAMHGRGEEALALFGDMRQARV---------------------------- 369
Query: 226 QAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+E T + VL C G ++ G + + AE G+ + G +VD + G L
Sbjct: 370 ---RPNEVTFLGVLSACCHAGNIEDGLRHFDAMAELHGVTPGIEHYG-CVVDMLGRAGRL 425
Query: 285 DTARNVFKEIP-RKNVVSWNAMISGLAFNG 313
D A + +P R + + W ++++ +G
Sbjct: 426 DEAEELVSVMPIRPDAIIWGSLLAACRAHG 455
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 21 IHAHFLRHKLHQSNLILAH-FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+HA+ +R + ++ + + + ++ A ++F+ M V + SMI +++G
Sbjct: 293 VHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAMHG 352
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG-------QCVHGEIIRSGFE 132
EE + LF ++ + P+E TF +L AC G++ G +HG + G E
Sbjct: 353 RGEEALALFGDMRQARVRPNEVTFLGVLSACCHAGNIEDGLRHFDAMAELHG--VTPGIE 410
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR-DVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+G VV++ G++D+ ++ M R D I+ ++ G VD+ + R
Sbjct: 411 HYGC----VVDMLGRAGRLDEAEELVSVMPIRPDAIIWGSLLAACRAHGHVDRAERVMRR 466
Query: 192 MR--ERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
M E + LM + + GR +A+++ +MR
Sbjct: 467 MAEDEDDAGDYVLMSNMYAQEGRHGKAVQVRRQMR 501
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 43/209 (20%)
Query: 254 IHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI---PRKNVVSWNAMISGLA 310
+H+++ GLYR V +ALV Y CG A ++F P +VVSW AM++ A
Sbjct: 80 LHAHSAKLGLYRHHRGVRDALVALYLACGRRGVASDLFAGAGGGPAPDVVSWTAMVTWHA 139
Query: 311 FNGRGELGVELY---------------------------EQMIAKGVSP---NKATFVGV 340
G EL+ E ++A+ V + V
Sbjct: 140 RLGLFREAAELFLAMADDGAVVVDAVAAAAAFAACAGAGELVLAREVHRRVLEAGVALDV 199
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVP--NLEHYGCMVDVLGRSGCVREAYDLIRSM-- 396
+ C A + K + A++ ++VP NL + M+ R+G ++EA +L R M
Sbjct: 200 VACNALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHARAGELQEALELFREMLQ 259
Query: 397 ------SIRPNAAIWGSLLSSCRTHGHVE 419
S P+ A + ++L +C G ++
Sbjct: 260 QQGCTSSPLPDDATFVAVLGACARLGALD 288
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 246/432 (56%), Gaps = 13/432 (3%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N++L+ +V ++++ A +F +M + + + +M+ + +G +E + + + +
Sbjct: 264 NVLLSGYVQ----FSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPS 319
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
+ LK+ L + D R Q G ++R ++ Y CG +D+
Sbjct: 320 DNVGAKTALMHGYLKSNL-IDDAR--QLFDGIVVRDAV-----CWNTMISGYVQCGMLDE 371
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
M +F +M ++D+I N MI G + G + K +FR+M+ R+ VSWN +IS ++G
Sbjct: 372 AMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLF 431
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL+ F MR A D T L A L + IG+ HS +G S GNA
Sbjct: 432 VEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGFISDS-SPGNA 490
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+ Y KCG + AR VF E+ +++VSWNA+I G A NG G + ++ +M A V P+
Sbjct: 491 LISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPD 550
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+ T V VL+ C+HAGL+++ F SM L+S+ P EHY CMVD+LGR+G +REA++L+
Sbjct: 551 EITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELV 610
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M I+PNA +WG+LL +CR H + E+A A ++L LEP + NYVLLSNI E G+WD
Sbjct: 611 QGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWD 670
Query: 454 DAETLRMWMREN 465
DA+ +R+ M+E+
Sbjct: 671 DADKVRVLMKES 682
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 181/401 (45%), Gaps = 58/401 (14%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A ++F++M + + +N+M+ A S +G E+ LF + +EY++ ++ +
Sbjct: 61 ARRLFDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAMPA----RNEYSWTIMVSCYVR 116
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
G+L + + + + R E+ + ++ Y G+ +D + + EM D++ N +
Sbjct: 117 AGELTLAREL---LDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSV 173
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
+ G + ++ + + F EM ++ +VSWNLM+ ++G +LD
Sbjct: 174 LGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAG-----------------DLDV 216
Query: 233 ATVVAVLPICARLGAVDIGQWIH---------SYAESSGLYRKV----VSVGNALVDFYC 279
A+ +R+ + ++ W++ E+ L+ ++ V N L+ Y
Sbjct: 217 ASA-----FFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYV 271
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+ ++ A N+F E+P KN +SW M+SG +G+ + ++ +M + V A G
Sbjct: 272 QFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHG 331
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
L + L++ AR+LF + +V + + M+ + G + EA L + M
Sbjct: 332 YL----KSNLIDDARQLFDGI-----VVRDAVCWNTMISGYVQCGMLDEAMVLFQQM--- 379
Query: 400 PNAAI--WGSLLSSCRTHGHVELAEHAVKELI--NLEPWNS 436
PN + W ++++ C G + A +++ N WNS
Sbjct: 380 PNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNS 420
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 139/308 (45%), Gaps = 21/308 (6%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A + +M P ++ +NS++ N V+ F + + D ++ +L+ +
Sbjct: 155 AIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPD----KDLVSWNLMLEGYVR 210
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
GDL V I + + +V Y G+M + ++FD M R+V+ N++
Sbjct: 211 AGDLDVASAFFSRIPSPNVISW----VNLVNGYCQAGRMGEARELFDRMPERNVVAWNVL 266
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
+ G+ + V+ LF EM E++ +SW M+S +SG+ EA + +M
Sbjct: 267 LSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKT 326
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
A + L + +D + + G+ + N ++ Y +CG+LD A +F+
Sbjct: 327 ALMHGYL----KSNLIDDARQLF-----DGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQ 377
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
++P K+++SWN MI+G A G+ ++ +M + N ++ +++ GL +
Sbjct: 378 QMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRR----NTVSWNSIISGFVQNGLFVE 433
Query: 353 ARELFASM 360
A + F M
Sbjct: 434 ALQHFMLM 441
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 145/321 (45%), Gaps = 25/321 (7%)
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
GQ+ ++F+EM R+V+ N M+ G + + LF EM R+ VSWN M+ +
Sbjct: 25 GQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNPVSWNTMMVACS 84
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
+ GR +A LF M + +E + ++ R G + + + + K
Sbjct: 85 QHGRVEDARGLFDAMPAR----NEYSWTIMVSCYVRAGELTLARELLDRMPG----EKCA 136
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
+ N ++ Y K G + A + +E+P ++VSWN+++ GL N V+ +++M K
Sbjct: 137 ACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDK 196
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+ G + AG ++ A F+ + PN+ + +V+ ++G + E
Sbjct: 197 DLVSWNLMLEGYV----RAGDLDVASAFFSRIPS-----PNVISWVNLVNGYCQAGRMGE 247
Query: 389 AYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA--EHAVKELINLEPWNSGNYVLLSNIY 446
A +L M R N W LLS G+V+ + E A I + NS ++ + + +
Sbjct: 248 ARELFDRMPER-NVVAWNVLLS-----GYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGF 301
Query: 447 AEGGRWDDAETLRMWMRENNV 467
G+ +A+ + M +NV
Sbjct: 302 VRSGKLQEAKDVLSKMPSDNV 322
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+ G L AR +F+E+PR+NVVS+NAM+S LA +GR L+++M + N ++
Sbjct: 23 RSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRR----NPVSWNT 78
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
++ C+ G VE AR LF +M N + MV R+G + A +L+ M
Sbjct: 79 MMVACSQHGRVEDARGLFDAMPA-----RNEYSWTIMVSCYVRAGELTLARELLDRMPGE 133
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKEL--INLEPWNS 436
AA + +++S +G E A ++E+ ++ WNS
Sbjct: 134 KCAACYNTMISGYAKNGRFEDAIALLQEMPAPDIVSWNS 172
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 238/460 (51%), Gaps = 35/460 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
Q HAH ++ L + +S + +A+++F+ + V+ + +MI + NG
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + F +K G+ +E T +LKA V D+R G+ VHG + +G + + I
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVK-CDVFI 242
Query: 140 G--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
G +V++Y C DD KVFDE M R+V
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDE-------------------------------MPSRNV 271
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W +I+ +S + + +F EM +E T+ +VL CA +GA+ G+ +H Y
Sbjct: 272 VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCY 331
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+ + + G L+D Y KCG L+ A VF+ + KNV +W AMI+G A +G
Sbjct: 332 MIKNSIEINT-TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
+L+ M++ VSPN+ TF+ VL+ CAH GLVE+ R LF SM G ++ P +HY CMV
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG 437
D+ GR G + EA LI M + P +WG+L SC H EL ++A +I L+P +SG
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 438 NYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y LL+N+Y+E WD+ +R M++ V KSPG S IE
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 224/495 (45%), Gaps = 78/495 (15%)
Query: 17 HLTQIHAHFLRHKLHQS--NLILAHFVSVCGTL-NEIKYATKIFNQMRNPSVLLFNSMIK 73
HL QIH L + + +L L+ + C T + +YA ++ Q++ S+ L++S+I
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIG 75
Query: 74 AYSLNGPSEEPVKLFAL--LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF 131
+S + A ++ G+ P +TF PLLKA + D Q H I++ G
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGL 134
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ +R ++ Y+S G D ++FD +DV+ MI GF + G + + F E
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
M++ V + +E TVV+VL ++ V G
Sbjct: 195 MKKTGVAA-------------------------------NEMTVVSVLKAAGKVEDVRFG 223
Query: 252 QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAF 311
+ +H +G + V +G++LVD Y KC D A+ VF E+P +NVV+W A+I+G
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 312 NGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE 371
+ + G+ ++E+M+ V+PN+ T VL+ CAH G + + R + M +SI N
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK-NSIEINTT 342
Query: 372 HYGCMVDVLGRSGCV-------------------------------REAYDLIRSM---S 397
++D+ + GC+ R+A+DL +M
Sbjct: 343 AGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSH 402
Query: 398 IRPNAAIWGSLLSSCRTHGHVELAEH---AVKELINLEPWNSGNYVLLSNIYAEGGRWDD 454
+ PN + ++LS+C G VE ++K N+EP + +Y + +++ G ++
Sbjct: 403 VSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP-KADHYACMVDLFGRKGLLEE 461
Query: 455 AETL--RMWMRENNV 467
A+ L RM M NV
Sbjct: 462 AKALIERMPMEPTNV 476
>gi|414587316|tpg|DAA37887.1| TPA: hypothetical protein ZEAMMB73_488455 [Zea mays]
Length = 622
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 256/524 (48%), Gaps = 66/524 (12%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN---PSVLLFNSMIKA 74
L Q+HA + LH + +LA F + C L A + + + L N+++ +
Sbjct: 98 LAQLHARIILLGLHNHHALLARFTTACDALECPSVAASFIAALTDSHAAPLRLRNAVLAS 157
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
+ + P + F LL+ + PD ++F LL+AC V L G+ +H IR G
Sbjct: 158 LARHAPLHAALTEFNLLRQAAL-PDSFSFPCLLRACARVSCLPAGRALHAAAIRLGVHAD 216
Query: 135 GSIRIGVVELYTSCGQMD-------------------------------DGMKVFDEMSH 163
IR +++ Y CG D D +FD M
Sbjct: 217 LFIRTALIQFYGRCGVADAARALFYQIDIPSEVSWTAIIVAYVNNGGIIDARALFDTMPQ 276
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS--------------------------- 196
R+V+ N+M+ G+ K GD++ LF EM ER+
Sbjct: 277 RNVVHWNVMVDGYVKCGDLEGARRLFDEMPERTATACTSLIGGYAKAGNMEAARLLFDKL 336
Query: 197 ----VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
V SW+ MIS ++G EALR F E + Q DE VV ++ C++LG + +
Sbjct: 337 EDRDVFSWSAMISGYAQNGYPGEALRTFDEFQGQGIHPDELVVVGLMSACSQLGNIRLAS 396
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
WI Y + V LV+ KCG L+ A +F+ +P ++V S+ +++ G +
Sbjct: 397 WIEDYITKYSIDMNNAHVLAGLVNMNAKCGNLERATFLFESMPVRDVFSYCSLMQGYCLH 456
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G + V+L+ +M+ +G++P+ A F VLT C HAGLVE+ ++ F M ++ +VP+ EH
Sbjct: 457 GSADKAVKLFSRMLLEGLTPDNAVFTIVLTACCHAGLVEEGKKFFDIMKNVYLMVPSGEH 516
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y C+V++LGR G + +AY LI SM +P+ WG+LL C+ H ++EL + A K+L +E
Sbjct: 517 YACLVNLLGRCGMLEDAYWLIMSMPGKPHPGAWGALLGGCKLHCNIELGKIAAKKLFEIE 576
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
P N+GNYV LSN+YA RW D +R M + K G++L+
Sbjct: 577 PDNAGNYVSLSNMYANIDRWGDVSEVRAEMTGKRITKIAGRTLV 620
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 256/483 (53%), Gaps = 53/483 (10%)
Query: 14 TRTHLTQIHAHFLR--HKLHQSNL-----ILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
T L QIHA LR + H + + IL H+ S+ T + YAT++F+ NP+
Sbjct: 34 TMPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSL--TQPNLTYATRVFHHFPNPNSF 91
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIW------PDEYTFAPLLKACLGVGDLRVGQ 120
++N++I+ Y+ + + K L K + PD +TF +LKAC L G+
Sbjct: 92 MWNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGK 151
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH +++ GFE I +V Y +CG +D K
Sbjct: 152 QVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEK------------------------ 187
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+F +M ER+ VSWN+MI S K G ALR+F EM+ + + D T+ +V+
Sbjct: 188 -------MFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQ-RVHDPDGYTMQSVIS 239
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKV--VSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
CA LGA+ +G W+H+Y V V V LVD YCK G L+ A+ VF+ + ++
Sbjct: 240 ACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRD 299
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+ +WN+MI GLA +G + + Y +M+ + + PN TFVGVL+ C H G+V++ F
Sbjct: 300 LNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDEGIVHF 359
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS-CRTHG 416
MT +++ P LEHYGC+VD+ R+G + EA +L+ MSI+P+A IW SLL + C+ +
Sbjct: 360 DMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDACCKQYA 419
Query: 417 HVELAEHAVKELINLE--PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
VEL+E K++ E +SG YVLLS +YA RW+D LR M E V K PG S
Sbjct: 420 SVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCS 479
Query: 475 LIE 477
+IE
Sbjct: 480 IIE 482
>gi|115458312|ref|NP_001052756.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|32479728|emb|CAE01515.1| OJ991214_12.4 [Oryza sativa Japonica Group]
gi|113564327|dbj|BAF14670.1| Os04g0414800 [Oryza sativa Japonica Group]
gi|125590342|gb|EAZ30692.1| hypothetical protein OsJ_14749 [Oryza sativa Japonica Group]
Length = 545
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 257/521 (49%), Gaps = 64/521 (12%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L Q+HA +R LH + +LA F + C L+ A + + V L N+++ + +
Sbjct: 25 LAQLHARIVRLGLHNHHALLARFAAACDALSCPSVAASLLSVAV--PVRLRNAVLASLAR 82
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ P + + F LL+ PD ++F PLL AC L G +H IR G + +
Sbjct: 83 HAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASSLPTGASLHAAAIRLGVDADLFV 142
Query: 138 RIGVVELYTSCG-------------------------------QMDDGMKVFDEMSHRDV 166
R +++ Y CG + ++FD++ HR+V
Sbjct: 143 RTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTAYVNSGDILTARELFDQIPHRNV 202
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERS------------------------------ 196
+ N M+ G+ K GD++ LF EM ER+
Sbjct: 203 VHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLIGGYLNAGNMGAARTLFDKLEDR 262
Query: 197 -VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ +W+ MIS ++G EALR+F+E + Q DE +V ++ C++LG + + +WI
Sbjct: 263 DLFAWSTMISGCAQNGYPGEALRIFNEFQKQEICPDELVIVGLMSACSQLGNITLARWIE 322
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y + V V L++ KCG ++ A +F+ + ++V S+ +M+ G +G
Sbjct: 323 GYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFESMSVRDVFSYCSMMQGHCLHGSA 382
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
VEL+ QM+ +G++P+ A F VLT C+HAGLVE+ + F M + IVP+ +HY C
Sbjct: 383 SKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEGKRYFDMMKNEYMIVPSGDHYAC 442
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+V +LGR G +R+AY+LI+SM P+ WG+LL C+ H +EL + A K+L +EP N
Sbjct: 443 LVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCKFHCDIELGKIAAKKLFEIEPEN 502
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+GNYV LSNIYA RW + R M + K G +L+
Sbjct: 503 AGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGCTLV 543
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/462 (32%), Positives = 250/462 (54%), Gaps = 13/462 (2%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
IH ++H + + + V++ ++ A +F+ M + +V+ +NS+ Y G
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
++ + +F + G+ PD T +L AC + DL+ G+ +HG +R G +
Sbjct: 425 PQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA 484
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV--- 197
++ LY C + + VFD + HR+V N ++ + + +KGLY+F +M V
Sbjct: 485 LLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKAD 544
Query: 198 -VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
++W+++I K+ R EA+ +F +M+ F+ DE T+ ++L C+ + +G+ IH
Sbjct: 545 EITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHC 604
Query: 257 YA----ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFN 312
Y + L R NALVD Y KCG L +RNVF +P K+V SWN MI +
Sbjct: 605 YVFRHWKDWDLART-----NALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMH 659
Query: 313 GRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH 372
G G+ + L+E+M+ V P+ ATF VL+ C+H+ LVE+ ++F SM+ H + P EH
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719
Query: 373 YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
Y C+VD+ R+GC+ EAY I+ M + P A W + L+ CR + +VELA+ + K+L ++
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEID 779
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
P S NYV L NI W +A +R M+E + K+PG S
Sbjct: 780 PNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCS 821
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 187/403 (46%), Gaps = 40/403 (9%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+IH +RH + + + + FV+ ++ A +F+ M + V+ +NS+ Y G
Sbjct: 162 EIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCG 221
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
++ + +F + G+ PD T + +L AC + DL+ G+ +HG ++ G +
Sbjct: 222 FPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSN 281
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+V LY SC + + VFD M HR+VI N + + G KGL +FREM
Sbjct: 282 ALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREM------- 334
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
G +G + D + ++LP C++L + G+ IH +A
Sbjct: 335 --------GLNG----------------VKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G+ V V ALV+ Y C + A+ VF +P +NVV+WN++ S G + G+
Sbjct: 371 KHGMVEDVF-VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGL 429
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ +M+ GV P+ T + +L C+ + K+ ++ H +V ++ ++ +
Sbjct: 430 NVFREMVLNGVKPDLVTMLSILHACSDLQDL-KSGKVIHGFAVRHGMVEDVFVCNALLSL 488
Query: 380 LGRSGCVREA---YDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
+ CVREA +DLI + A W +L++ T+ E
Sbjct: 489 YAKCVCVREAQVVFDLIPHREV----ASWNGILTAYFTNKEYE 527
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 166/395 (42%), Gaps = 35/395 (8%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+ Q H R + I F+ G ++ A ++F+ + V+ +NS+ Y
Sbjct: 59 VKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVN 118
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
G ++ + +F + + + T + +L C + DL+ G+ +HG ++R G +
Sbjct: 119 CGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFV 178
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
V Y C + + VFD M HRDV
Sbjct: 179 SSAFVNFYAKCLCVREAQTVFDLMPHRDV------------------------------- 207
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+WN + S G + L +F EM + D TV +L C+ L + G+ IH +
Sbjct: 208 VTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGF 267
Query: 258 AESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
A G+ V V NALV+ Y C + A+ VF +P +NV++WN++ S G +
Sbjct: 268 ALKHGMVENVF-VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMV 377
G+ ++ +M GV P+ +L C+ ++ + + H +V ++ +V
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK-HGMVEDVFVCTALV 385
Query: 378 DVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSC 412
++ CVREA + M R N W S LSSC
Sbjct: 386 NLYANCLCVREAQTVFDLMPHR-NVVTWNS-LSSC 418
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 45/358 (12%)
Query: 54 TKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGV 113
T I N+ ++PS + +G E +K++ + GI PD+ F + KAC
Sbjct: 3 TSIKNKKKSPSFGI---------PHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAAS 53
Query: 114 GD-LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
D L+V Q H + R CG M D V + N
Sbjct: 54 RDALKVKQ-FHDDATR-------------------CGVMSD------------VSIGNAF 81
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
IH + K V+ +F ++ R VV+WN + + G + L +F +M + +
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
TV ++LP C+ L + G+ IH + G+ V V +A V+FY KC + A+ VF
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVF-VSSAFVNFYAKCLCVREAQTVFD 200
Query: 293 EIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEK 352
+P ++VV+WN++ S G + G+ ++ +M+ GV P+ T +L+ C+ ++
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 353 ARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLS 410
+ + H +V N+ +V++ CVREA + M R N W SL S
Sbjct: 261 GKAIHG-FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR-NVITWNSLAS 316
>gi|356546597|ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial-like [Glycine max]
Length = 525
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 263/480 (54%), Gaps = 12/480 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L T +H +IH+ L+ + I + + N ++YA ++F+ +R+ ++
Sbjct: 43 LQLYINSETPSHGQKIHSSILKSGFVPNTNISIKLLILYLKCNCLRYARQVFDDLRDRTL 102
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG------VGDLRVG 119
+N MI Y EE + L L G PD +TF+ +LKA +GDL G
Sbjct: 103 SAYNYMISGYLKQDQVEESLGLVHRLLVSGEKPDGFTFSMILKASTSGCNVALLGDL--G 160
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VH +I++S ER + +++ Y G++ VFD MS ++V+ +I G+ +
Sbjct: 161 RMVHTQILKSDIERDEVLCTALIDSYVKNGRVAYARTVFDVMSEKNVVCSTSLISGYMNQ 220
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDS-EALRLFHEMRDQAFELDEATVVAV 238
G ++ +F + ++ VV++N MI K+ + +L ++ +M+ F + +T +V
Sbjct: 221 GSIEDAECIFLKTMDKDVVAFNAMIEGYSKTSEYAMRSLEVYIDMQRLNFRPNVSTFASV 280
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+ C+ L A +IGQ + S + Y + +G+AL+D Y KCG + AR VF + +KN
Sbjct: 281 IGACSMLAAFEIGQQVQSQLMKTPFYADI-KLGSALIDMYAKCGRVVDARRVFDCMLKKN 339
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELF 357
V SW +MI G NG + ++L+ ++ + G+ PN TF+ L+ CAHAGLV+K E+F
Sbjct: 340 VFSWTSMIDGYGKNGFPDEALQLFGKIQTEYGIVPNYVTFLSALSACAHAGLVDKGWEIF 399
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
SM + + P +EHY CMVD+LGR+G + +A++ + M RPN +W +LLSSCR HG+
Sbjct: 400 QSMENEYLVKPGMEHYACMVDLLGRAGMLNQAWEFVMRMPERPNLDVWAALLSSCRLHGN 459
Query: 418 VELAEHAVKELINLEPWN-SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+E+A+ A EL L G YV LSN A G+W+ LR M+E + K G+S +
Sbjct: 460 LEMAKLAANELFKLNATGRPGAYVALSNTLAAAGKWESVTELREIMKERGISKDTGRSWV 519
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 163/423 (38%), Gaps = 60/423 (14%)
Query: 92 KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
+N P +F+ L+ + GQ +H I++SGF +I I ++ LY C +
Sbjct: 28 QNHDFIPPSTSFSNALQLYINSETPSHGQKIHSSILKSGFVPNTNISIKLLILYLKCNCL 87
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---ERSVVSWNLMISSLG 208
+VFD++ R + N MI G+ K+ V++ L L + E+ MI
Sbjct: 88 RYARQVFDDLRDRTLSAYNYMISGYLKQDQVEESLGLVHRLLVSGEKPDGFTFSMILKAS 147
Query: 209 KSGRDSEAL----RLFH-EMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGL 263
SG + L R+ H ++ E DE A++ + G V + + +
Sbjct: 148 TSGCNVALLGDLGRMVHTQILKSDIERDEVLCTALIDSYVKNGRVAYARTVFDV-----M 202
Query: 264 YRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL-GVELY 322
K V +L+ Y G ++ A +F + K+VV++NAMI G + + +E+Y
Sbjct: 203 SEKNVVCSTSLISGYMNQGSIEDAECIFLKTMDKDVVAFNAMIEGYSKTSEYAMRSLEVY 262
Query: 323 EQMIAKGVSPNKATFVGVLTCC-----------------------------------AHA 347
M PN +TF V+ C A
Sbjct: 263 IDMQRLNFRPNVSTFASVIGACSMLAAFEIGQQVQSQLMKTPFYADIKLGSALIDMYAKC 322
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS----IRPNAA 403
G V AR +F M + N+ + M+D G++G EA L + I PN
Sbjct: 323 GRVVDARRVFDCM-----LKKNVFSWTSMIDGYGKNGFPDEALQLFGKIQTEYGIVPNYV 377
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSG--NYVLLSNIYAEGGRWDDAETLRMW 461
+ S LS+C G V+ + + N G +Y + ++ G + A M
Sbjct: 378 TFLSALSACAHAGLVDKGWEIFQSMENEYLVKPGMEHYACMVDLLGRAGMLNQAWEFVMR 437
Query: 462 MRE 464
M E
Sbjct: 438 MPE 440
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/485 (35%), Positives = 267/485 (55%), Gaps = 43/485 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKL--HQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+L+ L+ + L QIHA LR L H + L L + +L+++ YA ++F+Q+ N
Sbjct: 25 LLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLHDLNYAYRVFDQVDN 84
Query: 63 PSVLLFNSMIKAYSLNGP---SEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
P+ ++N +I+A + + E + L+ +L+ +PD +TF +LKAC + L
Sbjct: 85 PNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFE 144
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H +++ GF+ DV + N +IH +
Sbjct: 145 GKQAHAHLLKLGFQS-------------------------------DVYINNSLIHFYAS 173
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G ++ +F +M +RS+VSWN MI + G AL+LF + + Q FE D T+ +V
Sbjct: 174 CGSLESAKNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSV 233
Query: 239 LPICARLGAVDIGQWIHSYAESS---GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ CA L A+ +G W H++ + + R V V N+L+D YCKCG LD A +F+ +
Sbjct: 234 INACAGLCALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQ 293
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKAR 354
+ +V SWN+MI G A +G+GEL +E +E+MI PN TFVGVL+ C H +V + R
Sbjct: 294 KHDVTSWNSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGR 353
Query: 355 ELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS-CR 413
+ F M + I P LEHYGC+VD+L R+G + EA +L+ SM ++P+ IW SLL S C+
Sbjct: 354 KYFDMMVNEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCK 413
Query: 414 THGHVELAEHAVKELINLEPWN-SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
+ VEL+E+ ++++ E + SG YVLLS +YA RW+D +R M N + K PG
Sbjct: 414 KNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPG 473
Query: 473 QSLIE 477
SLIE
Sbjct: 474 CSLIE 478
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 237/434 (54%), Gaps = 36/434 (8%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG + + A ++F M SV + +MIK + NG ++E ++ F +K G+ D+Y F
Sbjct: 218 CGMIED---ALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
+L AC G+G + G+ +H IIR+ F+ + ++++Y C + VFD M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM-- 331
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
++++VVSW M+ G++GR EA+++F +M
Sbjct: 332 -----------------------------KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D T+ + CA + +++ G H A +SGL V+V N+LV Y KCG
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH-YVTVSNSLVTLYGKCGD 421
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+D + +F E+ ++ VSW AM+S A GR ++L+++M+ G+ P+ T GV++
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+ AGLVEK + F MT + IVP++ HY CM+D+ RSG + EA I M P+A
Sbjct: 482 CSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
W +LLS+CR G++E+ + A + LI L+P + Y LLS+IYA G+WD LR MR
Sbjct: 542 GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMR 601
Query: 464 ENNVKKSPGQSLIE 477
E NVKK PGQS I+
Sbjct: 602 EKNVKKEPGQSWIK 615
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 213/444 (47%), Gaps = 44/444 (9%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
L RN ++ IH + +R + + + V + YA ++F+++ P++ +
Sbjct: 16 LGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSW 75
Query: 69 NSM-------------------------------IKAYSLNGPSEEPVKLF-ALLKNLGI 96
N++ I+ YSL+G VK + ++++
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSA 135
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
T +LK G + +G+ +HG++I+ GFE + + ++ +Y + G + D K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VF + R+ ++ N ++ G G ++ L LFR M E+ VSW MI L ++G EA
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEA 254
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+ F EM+ Q ++D+ +VLP C LGA++ G+ IH+ + ++ + VG+AL+D
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDHIYVGSALID 313
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
YCKC L A+ VF + +KNVVSW AM+ G GR E V+++ M G+ P+ T
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYT 373
Query: 337 FVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY----GCMVDVLGRSGCVREAYDL 392
++ CA+ +E+ + +I L HY +V + G+ G + ++ L
Sbjct: 374 LGQAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHG 416
M++R +A W +++S+ G
Sbjct: 429 FNEMNVR-DAVSWTAMVSAYAQFG 451
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
+Q H + L + V++ G +I +T++FN+M + + +M+ AY+
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQF 450
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI- 137
G + E ++LF + G+ PD T ++ AC G + GQ + +++ S + SI
Sbjct: 451 GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ-RYFKLMTSEYGIVPSIG 509
Query: 138 -RIGVVELYTSCGQMDDGMKVFDEMSH-RDVIVRNLMIHGFCKKGDVDKGLYLFR---EM 192
+++L++ G++++ M+ + M D I ++ KG+++ G + E+
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
+ L+ S G+ +L MR++
Sbjct: 570 DPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 252/471 (53%), Gaps = 39/471 (8%)
Query: 7 RLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
++ GR HL + +HFL + L N+I+ + CG L++ A ++F++M ++
Sbjct: 102 KVEQGRIVHAHL--VDSHFLDNHLVLQNIIVNMYAK-CGCLDD---ARRMFDEMPTKDMV 155
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ ++I +S N + + LF + LG+ P+ +T + LLKA L G +H
Sbjct: 156 TWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFC 215
Query: 127 IRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGL 186
++ G++ + +V++Y CG MD FD M
Sbjct: 216 LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP------------------------ 251
Query: 187 YLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLG 246
+S VSWN +IS + G AL L +M+ + F+ T +V CA +G
Sbjct: 252 -------TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIG 304
Query: 247 AVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMI 306
A++ G+W+H++ SGL + + +GN L+D Y K G +D A+ VF + + +VVSWN M+
Sbjct: 305 ALEQGKWVHAHMIKSGL-KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 307 SGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSI 366
+G A +G G+ ++ +EQM+ G+ PN+ +F+ VLT C+H+GL+++ F M + +
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422
Query: 367 VPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVK 426
P++ HY VD+LGR G + A IR M I P AA+WG+LL +CR H ++EL +A +
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482
Query: 427 ELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P +SG +LLSNIYA GRW D +R M+E+ VKK P S +E
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 43/332 (12%)
Query: 90 LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGF-ERFGSIRIGVVELYTSC 148
L++ + PD ++ LLK C +G + G+ VH ++ S F + ++ +V +Y C
Sbjct: 77 LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136
Query: 149 GQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLG 208
G +DD ++FDEM +D++ +I GF
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGF-------------------------------S 165
Query: 209 KSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVV 268
++ R +AL LF +M + + T+ ++L +D G +H++ G Y+ V
Sbjct: 166 QNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYG-YQSSV 224
Query: 269 SVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK 328
VG+ALVD Y +CG +D A+ F +P K+ VSWNA+ISG A G GE + L +M K
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284
Query: 329 GVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSI--VPNLEHYGCMVDVLGRSG 384
P T+ V + CA G +E+ + + A M +GL I + N ++D+ ++G
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN-----TLLDMYAKAG 339
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
+ +A + + ++P+ W ++L+ C HG
Sbjct: 340 SIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 14/231 (6%)
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
+L C RLG V+ G+ +H++ S + + N +V+ Y KCG LD AR +F E+P K
Sbjct: 93 LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAREL- 356
++V+W A+I+G + N R + L+ QM+ G+ PN T +L ++ +L
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 357 -FASMTGLHSIVPNLEHYG-CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRT 414
F G S V + G +VD+ R G + A M + + W +L+S
Sbjct: 213 AFCLKYGYQSSV----YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHAR 267
Query: 415 HGHVELAEHAVKEL--INLEPWN---SGNYVLLSNIYA-EGGRWDDAETLR 459
G E A H + ++ N +P + S + ++I A E G+W A ++
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIK 318
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 251/447 (56%), Gaps = 12/447 (2%)
Query: 31 HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFAL 90
H S +L + G +NE A ++F++M + V+ + +M+ Y G E LF
Sbjct: 143 HVSYTVLLGGLLDAGRVNE---ARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDE 199
Query: 91 LKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQ 150
+ + ++ ++ G++ + + + + + ++ +G Y G
Sbjct: 200 MPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVG----YIQAGH 251
Query: 151 MDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS 210
++D ++F+ M V N M+ GF ++G VD +F +M ER +W+ MI + ++
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQN 311
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSV 270
EAL F EM + + +V+++L +CA L +D G+ +H+ V +V
Sbjct: 312 EFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAV 371
Query: 271 GNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
+AL+ Y KCG LD A+ VF K++V WN+MI+G A +G GE + ++ M G+
Sbjct: 372 -SALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
SP+ T++G LT C++ G V++ RE+F SMT SI P EHY CMVD+LGRSG V EA+
Sbjct: 431 SPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAF 490
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
DLI++M + P+A IWG+L+ +CR H + E+AE A K+L+ LEP N+G YVLLS+IY G
Sbjct: 491 DLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVG 550
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
RW+DA +R ++ N+ KSPG S IE
Sbjct: 551 RWEDASKMRKFISSRNLNKSPGCSWIE 577
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 54/266 (20%)
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
V+ ++ G+ + G + + LF++M ER+ VS+ +++ L +GR +EA RLF EM D
Sbjct: 112 VVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPD 171
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ D+ W A++ YC+ G +
Sbjct: 172 R----------------------DVVAW------------------TAMLSGYCQAGRIT 191
Query: 286 TARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA 345
AR +F E+P++NVVSW AMISG A NG L +L+E M + N+ ++ +L
Sbjct: 192 EARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYI 247
Query: 346 HAGLVEKARELFASMTGLHSIVPNLEHYGC--MVDVLGRSGCVREAYDLIRSMSIRPNAA 403
AG VE A ELF +M P C M+ G+ G V A + M R +
Sbjct: 248 QAGHVEDAAELFNAM-------PEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGT 300
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELI 429
W +++ + + + A +E++
Sbjct: 301 -WSAMIKAYEQNEFLMEALSTFREML 325
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 140/299 (46%), Gaps = 24/299 (8%)
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y G + D +++F +M R+ + +++ G G V++ LF EM +R VV+W M+
Sbjct: 122 YVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAML 181
Query: 205 SSLGKSGRDSEALRLFHEMRD--------------QAFELDEA-TVVAVLP-------IC 242
S ++GR +EA LF EM Q E++ A + V+P
Sbjct: 182 SGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTA 241
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G + G + + + V+ NA++ + + G++D A+ VF+++ ++ +W
Sbjct: 242 MLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTW 301
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+AMI N + + +M+ +GV PN + + +LT CA +++ RE+ A+M
Sbjct: 302 SAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLR 361
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
S ++ ++ + + G + +A + + + + +W S+++ HG E A
Sbjct: 362 C-SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHGLGEQA 418
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 15/150 (10%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSV---CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
++HA LR ++ +++ CG L++ K ++F+ ++++NSMI Y+
Sbjct: 354 EVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK---RVFHTFEPKDIVMWNSMITGYA 410
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI-----IRSGF 131
+G E+ + +F ++ G+ PD T+ L AC G ++ G+ + + IR G
Sbjct: 411 QHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGA 470
Query: 132 ERFGSIRIGVVELYTSCGQMDDGMKVFDEM 161
E + + V+L G +++ + M
Sbjct: 471 EHYSCM----VDLLGRSGLVEEAFDLIKNM 496
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+ Y + + D A +F+ +P +++ S+NA+ISGL+ R + + + +
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGLSL--RRQTLPDAAAALASIPFP 109
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEH--YGCMVDVLGRSGCVREA 389
P+ +F +L GL+ A LF M P H Y ++ L +G V EA
Sbjct: 110 PSVVSFTSLLRGYVRHGLLADAIRLFQQM-------PERNHVSYTVLLGGLLDAGRVNEA 162
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
L M R + W ++LS G + A E+ N ++ + + YA+
Sbjct: 163 RRLFDEMPDR-DVVAWTAMLSGYCQAGRITEARALFDEMPKR---NVVSWTAMISGYAQN 218
Query: 450 GRWDDAETLRMWMRENN 466
G + A L M E N
Sbjct: 219 GEVNLARKLFEVMPERN 235
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/419 (36%), Positives = 220/419 (52%), Gaps = 33/419 (7%)
Query: 60 MRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
M +PS + + ++I AY G + E + + G+ PD +T +L AC V DL G
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETG 60
Query: 120 QCVHGEIIRS-GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ V + G + ++LY CG+M+
Sbjct: 61 EAVWAAARQEEGVAESVFVATAALDLYVKCGEME-------------------------- 94
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
K +F EM+ R V+W M+ +G EAL LF M+ + + D TVV
Sbjct: 95 -----KARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGA 149
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L C RLGA+D+G+ + V +G AL+D Y KCG A VF+++ ++
Sbjct: 150 LSACTRLGALDLGRQAVGMVHWDEVLGNPV-LGTALIDMYAKCGSTSEAWMVFQQMLERD 208
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
++ WNAMI GL G ++ L QM GV N TF+G+L C H GLV R+ F
Sbjct: 209 IIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFH 268
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+MT ++ I P +EHYGCMVD+ R+G + EA+ LI M + NA +WG+LL C+ H +
Sbjct: 269 NMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNA 328
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+LAEHA+K+LI LEPWNSGNYV+LSNIY+ GRW+DA LR+ M+ ++K P S +E
Sbjct: 329 DLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVE 387
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 44/322 (13%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG E++ A +F++M+N + + +M+ Y+ NG E + LF ++ G PD YT
Sbjct: 90 CG---EMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTV 146
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEM 161
L AC +G L +G+ G + E G+ +G ++++Y CG + VF +M
Sbjct: 147 VGALSACTRLGALDLGRQAVGMVHWD--EVLGNPVLGTALIDMYAKCGSTSEAWMVFQQM 204
Query: 162 SHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFH 221
RD+IV WN MI LG +G + A L
Sbjct: 205 LERDIIV-------------------------------WNAMILGLGMTGHEKIAFALVG 233
Query: 222 EMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNALVDFYCK 280
+M+ +L++ T + +L C G V+ G Q+ H+ + ++ G +VD + +
Sbjct: 234 QMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYG-CMVDLFSR 292
Query: 281 CGILDTARNVFKEIPR-KNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP-NKATFV 338
G+L+ A + ++P N V W A++ G + +L +Q+I + P N +V
Sbjct: 293 AGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIR--LEPWNSGNYV 350
Query: 339 GVLTCCAHAGLVEKARELFASM 360
+ +++G E A +L M
Sbjct: 351 MLSNIYSNSGRWEDAAKLRLEM 372
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 246/516 (47%), Gaps = 72/516 (13%)
Query: 33 SNLILAHFVSVC-GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALL 91
S+L + + C + + A K+F+ M +L+N+M+ N +E + +F +
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDM 198
Query: 92 KNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQM 151
GI D T A +L + DL +G + ++ GF + G+ LY+ CG++
Sbjct: 199 VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEI 258
Query: 152 DDGMKVFDEMSHRDVIVRNLMI-------------------------------------- 173
+ +F ++ D++ N MI
Sbjct: 259 ETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVF 318
Query: 174 ------------HGFCKK--------------------GDVDKGLYLFREMRERSVVSWN 201
HGFC K +++ LF E E+S+ SWN
Sbjct: 319 FPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWN 378
Query: 202 LMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESS 261
MIS ++G +A+ LF EM+ + TV ++L CA+LGA+ +G+W+H
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438
Query: 262 GLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVEL 321
+ + V AL+D Y KCG + A+ +F +P KN V+WNAMISG +G G + L
Sbjct: 439 S-FESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNL 497
Query: 322 YEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLG 381
+ +M+ VSP TF+ VL C+HAGLV + E+F SM H P EHY CMVD+LG
Sbjct: 498 FNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLG 557
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL 441
R+G + +A D IR M + P +WG+LL +C H LA A +L L+P N G YVL
Sbjct: 558 RAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVL 617
Query: 442 LSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
LSNIY+ G + +A ++R ++ + K+PG +LIE
Sbjct: 618 LSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIE 653
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 209/503 (41%), Gaps = 82/503 (16%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
L L++ +T L Q HA + + LH + + L I A+ +F+ + NP
Sbjct: 13 FLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPD 72
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+ L+N +I+A+SLN V L+ L K+ + PD +T+A ++ +G +
Sbjct: 73 LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS 132
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
I +GF + +V Y ++ KVFD M RD ++ N M+ G K D
Sbjct: 133 ---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
EA+ +F +M D TV AVLP A
Sbjct: 190 -------------------------------EAILIFGDMVKGGIGFDSTTVAAVLPGVA 218
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L + +G I A G + + L Y KCG ++TAR +F +I + ++VS+N
Sbjct: 219 ELQDLALGMGIQCLAMKVGFHSHAYVI-TGLACLYSKCGEIETARLLFGQIGQPDLVSYN 277
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV-----------LTCCAHA----- 347
AMISG N E V L+++++ G N ++ VG+ LT C H
Sbjct: 278 AMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKS 337
Query: 348 -------------------GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVRE 388
+E AR LF S +L + M+ ++G +
Sbjct: 338 GVVSNSSVSTALTTVYSRLNEIESARLLFD-----ESSEKSLASWNAMISGYAQNGLTEK 392
Query: 389 AYDLIRSMS---IRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLS 443
A L + M +RPN S+LS+C G + L + V +LIN E + S +V L
Sbjct: 393 AISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNIFVSTALI 451
Query: 444 NIYAEGGRWDDAETLRMWMRENN 466
++YA+ G +A+ L M E N
Sbjct: 452 DMYAKCGSITEAQRLFSMMPEKN 474
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 17 HLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HLT+ IH + + ++ + +V LNEI+ A +F++ S+ +N+MI Y
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ NG +E+ + LF ++ + P+ T +L AC +G L +G+ VH I R FE
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNI 444
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++++Y CG + + ++F M ++ + N MI G+
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGY------------------- 485
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
G G EAL LF+EM T ++VL C+ G V G I
Sbjct: 486 ------------GLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIF 533
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ + +VD + G LD A + +++P
Sbjct: 534 RSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP 573
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 260/537 (48%), Gaps = 76/537 (14%)
Query: 13 NTRTHLTQIHAHFLRHKL--HQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNS 70
+++ Q+HA F+R + H S I+ +S+ L + A +F + +P VL + S
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIV---ISIYTNLKLLHEALLVFKTLESPPVLAWKS 75
Query: 71 MIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
+I+ ++ + F ++ G PD F +LK+C + DLR G+ VHG I+R G
Sbjct: 76 VIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM------------------ 172
+ ++ +Y+ +D KVF+ M +DV+ N +
Sbjct: 136 MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVR 195
Query: 173 --------------------------------IHGFCKKGDVDKGLYL------------ 188
IHG+ + +D +Y+
Sbjct: 196 EMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA 255
Query: 189 --------FREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
F + R +SWN +++ ++GR +EALRLF +M +V+P
Sbjct: 256 RIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIP 315
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA L + +G+ +H Y G R + + +ALVD Y KCG + AR +F + + V
Sbjct: 316 ACAHLATLHLGKQLHGYVLRGGFGRNIF-IASALVDMYSKCGNIQAARKIFDRMNLHDEV 374
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SW A+I G A +G G V L+E+M +GV PN+ FV VLT C+H GLV++A F SM
Sbjct: 375 SWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 434
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
T ++ + LEHY + D+LGR+G + EAYD I M + P ++W +LLSSC H ++EL
Sbjct: 435 TKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLEL 494
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
AE +++ ++ N G YVL+ N+YA GRW + LR+ +R+ ++K P S IE
Sbjct: 495 AEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIE 551
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 249/462 (53%), Gaps = 36/462 (7%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY- 75
Q+H+ +RH L + L + + C + A KIF+Q+ + +V + +MI Y
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
G EE + LF + + P+ +TF+ LKAC + LR+G+ V ++ GF
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ ++ +Y G++DD K F D++ E+
Sbjct: 412 CVANSLISMYARSGRIDDARKAF------DILF-------------------------EK 440
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+++S+N +I + K+ EAL LF+E+ DQ T ++L A +G + G+ IH
Sbjct: 441 NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ SGL + SV NAL+ Y +CG +++A VF+++ +NV+SW ++I+G A +G
Sbjct: 501 ARVIKSGL-KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFA 559
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+EL+ +M+ +GV PN+ T++ VL+ C+H GLV + + F SM H ++P +EHY C
Sbjct: 560 TQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYAC 619
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
+VD+LGRSG + EA I SM + +A +W + L +CR HG++EL +HA K +I EP +
Sbjct: 620 IVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHD 679
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y+LLSN+YA +WD+ +R M+E + K G S +E
Sbjct: 680 PAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVE 721
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 175/387 (45%), Gaps = 47/387 (12%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL-FNSMIKAYSL 77
T +H + L ++ L +S+ + + AT IF M + L+ +++M+ ++
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN 145
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
N + F + G +P+EY FA +AC + VG + G +I++G+ +
Sbjct: 146 NNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ---- 201
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ CG +D + + G +GD+ +F +M ER+
Sbjct: 202 ----SDVCVGCGLID------------------MFVKG---RGDLVSAFKVFEKMPERNA 236
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
V+W LMI+ L + G EA+ LF +M +E D T+ V+ CA + + +GQ +HS
Sbjct: 237 VTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQ 296
Query: 258 AESSGLYRKVVSVGNALVDFYCKC---GILDTARNVFKEIPRKNVVSWNAMISG-LAFNG 313
A GL VG L++ Y KC G + AR +F +I NV SW AMI+G + G
Sbjct: 297 AIRHGLTLDRC-VGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGG 355
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHY 373
E ++L+ MI V PN TF L CA+ + ++F H++
Sbjct: 356 YDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT-----HAVKLGFSSV 410
Query: 374 GCMVDVL-------GRSGCVREAYDLI 393
C+ + L GR R+A+D++
Sbjct: 411 NCVANSLISMYARSGRIDDARKAFDIL 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 167/430 (38%), Gaps = 71/430 (16%)
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG + + + + G PD T++ LK C+ +G VH ++ +S +
Sbjct: 44 NGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVT 103
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ LY+ CGQ + +F M R +
Sbjct: 104 LNSLISLYSKCGQWEKATSIFRLMG------------------------------SSRDL 133
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSY 257
+SW+ M+S + AL F +M + + +E A C+ V +G I +
Sbjct: 134 ISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGF 193
Query: 258 AESSGLYRKVVSVGNALVDFYCKC-GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
+G + V VG L+D + K G L +A VF+++P +N V+W MI+ L G
Sbjct: 194 VIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAG 253
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA------------------ 358
++L+ MI G P++ T GV++ CA+ L+ ++L +
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLI 313
Query: 359 ----------SMTGLHSIVPN-LEH-----YGCMVDVLGRSGCVREAYDLIRSM---SIR 399
SM I L+H + + + G EA DL R M +
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVL--LSNIYAEGGRWDDAET 457
PN + S L +C + + E + L ++S N V L ++YA GR DDA
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVFTHAVKL-GFSSVNCVANSLISMYARSGRIDDARK 432
Query: 458 LRMWMRENNV 467
+ E N+
Sbjct: 433 AFDILFEKNL 442
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,483,250,214
Number of Sequences: 23463169
Number of extensions: 311617126
Number of successful extensions: 847715
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8211
Number of HSP's successfully gapped in prelim test: 3410
Number of HSP's that attempted gapping in prelim test: 675613
Number of HSP's gapped (non-prelim): 56595
length of query: 477
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 331
effective length of database: 8,933,572,693
effective search space: 2957012561383
effective search space used: 2957012561383
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)