BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042503
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80488|PPR23_ARATH Pentatricopeptide repeat-containing protein At1g09190
OS=Arabidopsis thaliana GN=PCMP-E70 PE=2 SV=1
Length = 484
Score = 616 bits (1589), Expect = e-175, Method: Compositional matrix adjust.
Identities = 288/477 (60%), Positives = 369/477 (77%), Gaps = 1/477 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
IERK+LRLLHG NTRT L +IHAH LRH LH SNL+LAHF+S+CG+L+ YA ++F+ +
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI 62
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+NP+VL+FN+MIK YSL GP E + F+ +K+ GIW DEYT+APLLK+C + DLR G+
Sbjct: 63 QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGK 122
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
CVHGE+IR+GF R G IRIGVVELYTS G+M D KVFDEMS R+V+V NLMI GFC G
Sbjct: 123 CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSG 182
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
DV++GL+LF++M ERS+VSWN MISSL K GRD EAL LF EM DQ F+ DEATVV VLP
Sbjct: 183 DVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLP 242
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
I A LG +D G+WIHS AESSGL++ ++VGNALVDFYCK G L+ A +F+++ R+NVV
Sbjct: 243 ISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVV 302
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFAS 359
SWN +ISG A NG+GE G++L++ MI +G V+PN+ATF+GVL CC++ G VE+ ELF
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGL 362
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + EHYG MVD++ RSG + EA+ +++M + NAA+WGSLLS+CR+HG V+
Sbjct: 363 MMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVK 422
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LAE A EL+ +EP NSGNYVLLSN+YAE GRW D E +R M++N ++KS GQS I
Sbjct: 423 LAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/478 (38%), Positives = 294/478 (61%), Gaps = 2/478 (0%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQM 60
+E + L +R +I+A + H L QS+ ++ V C + ++ YAT++FNQ+
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV 68
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
NP+V L+NS+I+AY+ N + ++++ LL+ PD +TF + K+C +G +G
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 120 QCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
+ VHG + + G ++++Y + D KVFDEM RDVI N ++ G+ +
Sbjct: 129 KQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
G + K LF M ++++VSW MIS G EA+ F EM+ E DE ++++VL
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
P CA+LG++++G+WIH YAE G + K V NAL++ Y KCG++ A +F ++ K+V
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRG-FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDV 307
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
+SW+ MISG A++G +E + +M V PN TF+G+L+ C+H G+ ++ F
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I P +EHYGC++DVL R+G + A ++ ++M ++P++ IWGSLLSSCRT G+++
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLD 427
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A A+ L+ LEP + GNYVLL+NIYA+ G+W+D LR +R N+KK+PG SLIE
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIE 485
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/478 (40%), Positives = 296/478 (61%), Gaps = 15/478 (3%)
Query: 9 LHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF 68
+HG N +T L Q H + + L++ NL +A F+ C ++YA +F P+ L
Sbjct: 23 IHGNNLKT-LKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH 81
Query: 69 NSMIKAYSL-NGPSEEPV------KLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
N+MI+A SL + P+ + KL+AL PD +TF +LK + V D+ G+
Sbjct: 82 NTMIRALSLLDEPNAHSIAITVYRKLWALCAK----PDTFTFPFVLKIAVRVSDVWFGRQ 137
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG+++ GF+ + G++++Y SCG + D K+FDEM +DV V N ++ G+ K G+
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 182 VDKGLYLFREMR--ERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+D+ L M R+ VSW +IS KSGR SEA+ +F M + E DE T++AVL
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
CA LG++++G+ I SY + G+ R VS+ NA++D Y K G + A +VF+ + +NV
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMYAKSGNITKALDVFECVNERNV 316
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V+W +I+GLA +G G + ++ +M+ GV PN TF+ +L+ C+H G V+ + LF S
Sbjct: 317 VTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNS 376
Query: 360 MTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVE 419
M + I PN+EHYGCM+D+LGR+G +REA ++I+SM + NAAIWGSLL++ H +E
Sbjct: 377 MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLE 436
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L E A+ ELI LEP NSGNY+LL+N+Y+ GRWD++ +R M+ VKK G+S IE
Sbjct: 437 LGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 349 bits (895), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/488 (36%), Positives = 291/488 (59%), Gaps = 24/488 (4%)
Query: 13 NTRT--HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLN----EIKYATKIFNQMRNPSVL 66
N RT L+QIHA F++ + L A + C T + ++ YA KIFNQM +
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 67 LFNSMIKAYSLNGPSEEPVKL---FALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
+N++I+ +S + + + + + ++ + + P+ +TF +LKAC G ++ G+ +H
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDG------------MKVFDEMSHRD--VIVR 169
G ++ GF + +V +Y CG M D M V + RD +++
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
N+MI G+ + GD LF +MR+RSVVSWN MIS +G +A+ +F EM+
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
+ T+V+VLP +RLG++++G+W+H YAE SG+ V +G+AL+D Y KCGI++ A +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSALIDMYSKCGIIEKAIH 330
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF+ +PR+NV++W+AMI+G A +G+ ++ + +M GV P+ ++ +LT C+H GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
VE+ R F+ M + + P +EHYGCMVD+LGRSG + EA + I +M I+P+ IW +LL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
+CR G+VE+ + L+++ P +SG YV LSN+YA G W + +R+ M+E +++K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510
Query: 470 SPGQSLIE 477
PG SLI+
Sbjct: 511 DPGCSLID 518
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 348 bits (893), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 279/459 (60%), Gaps = 7/459 (1%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
+ Q+HAH LR + ++ +L + + + YA K+F+ +N L+N +I+AY +
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
+ E + L+ LL G+ P +TF + A R + +H + RSGFE
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSV 197
++ Y G + +VFDEMS RDV V N MI G+ ++GD+ + LF M ++V
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 198 VSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
SW +IS ++G SEAL++F M +D++ + + TVV+VLP CA LG ++IG+ +
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRG 315
YA +G + + V NA ++ Y KCG++D A+ +F+E+ ++N+ SWN+MI LA +G+
Sbjct: 240 YARENGFFDNIY-VCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ + L+ QM+ +G P+ TFVG+L C H G+V K +ELF SM +H I P LEHYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
M+D+LGR G ++EAYDLI++M ++P+A +WG+LL +C HG+VE+AE A + L LEP N
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQS 474
GN V++SNIYA +WD +R M++ + K+ G S
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 345 bits (886), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 285/475 (60%), Gaps = 5/475 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
+ ++ +L H+ IHA +R Q ++ + VC TL+ + YA +F+ + N
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V L+ +MI + +G S + V L+ + + + PD Y +LKAC DL+V + +
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H ++++ GF S+ + ++E+Y G++ + K+FDEM RD + +MI+ + + G +
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ L LF++++ + V W MI L ++ ++AL LF EM+ + +E T V VL C
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+ LGA+++G+W+HS+ E+ + VGNAL++ Y +CG ++ AR VF+ + K+V+S+
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNF-VGNALINMYSRCGDINEARRVFRVMRDKDVISY 324
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
N MISGLA +G + + M+ +G PN+ T V +L C+H GL++ E+F SM
Sbjct: 325 NTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ ++ P +EHYGC+VD+LGR G + EAY I ++ I P+ + G+LLS+C+ HG++EL E
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
K L E +SG YVLLSN+YA G+W ++ +R MR++ ++K PG S IE
Sbjct: 445 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 265/438 (60%), Gaps = 1/438 (0%)
Query: 40 FVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPD 99
F+ + + I YA +F++M + V+ +N+MI+ Y G +E KLF +K+ + PD
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 100 EYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFD 159
E ++ AC G++R + ++ +I + + +V +Y G MD + F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
+MS R++ V M+ G+ K G +D +F + ++ +V W MIS+ +S EALR+
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 220 FHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYC 279
F EM + D ++ +V+ CA LG +D +W+HS +GL ++ S+ NAL++ Y
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL-SINNALINMYA 390
Query: 280 KCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
KCG LD R+VF+++PR+NVVSW++MI+ L+ +G + L+ +M + V PN+ TFVG
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
VL C+H+GLVE+ +++FASMT ++I P LEHYGCMVD+ GR+ +REA ++I SM +
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLR 459
N IWGSL+S+CR HG +EL + A K ++ LEP + G VL+SNIYA RW+D +R
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 460 MWMRENNVKKSPGQSLIE 477
M E NV K G S I+
Sbjct: 571 RVMEEKNVFKEKGLSRID 588
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 215/438 (49%), Gaps = 18/438 (4%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP- 63
IL L + H+ Q+HAH LR ++ +SV + + YA +F+ + +P
Sbjct: 15 ILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVH 123
++FN ++ S + + + ++++G D+++F P+LKA V L G +H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
G + + G +++Y SCG+++ VFDEMSHRDV+ N MI +C+ G VD
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 184 KGLYLFREMRERSVVSWNL----MISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVL 239
+ LF EM++ +V+ + ++S+ G++G ++ + + +D + A++
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
+ A G +D+ + L+ V A+V Y KCG LD A+ +F + +K++
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLF-----VSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFAS 359
V W MIS + + + ++E+M G+ P+ + V++ CA+ G+++KA+ + +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 360 M--TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
+ GL S L ++++ + G + D+ M R N W S++++ HG
Sbjct: 370 IHVNGLES---ELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Query: 418 VE--LAEHAVKELINLEP 433
L+ A + N+EP
Sbjct: 426 ASDALSLFARMKQENVEP 443
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 332 bits (852), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 266/497 (53%), Gaps = 38/497 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSL 77
L +H+ + L ++ + + +L ++ A K+F+++ +V++ N MI++Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 78 NGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSI 137
NG E VK+F + + PD YTF +LKAC G + +G+ +HG + G +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 138 RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR---- 193
G+V +Y CG + + V DEMS RDV+ N ++ G+ + D L + REM
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 194 ---------------------------------ERSVVSWNLMISSLGKSGRDSEALRLF 220
++S+VSWN+MI K+ EA+ L+
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 221 HEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
M FE D ++ +VLP C A+ +G+ IH Y E L ++ + NAL+D Y K
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL-LENALIDMYAK 356
Query: 281 CGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGV 340
CG L+ AR+VF+ + ++VVSW AMIS F+GRG V L+ ++ G+ P+ FV
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTT 416
Query: 341 LTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
L C+HAGL+E+ R F MT + I P LEH CMVD+LGR+G V+EAY I+ MS+ P
Sbjct: 417 LAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP 476
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRM 460
N +WG+LL +CR H ++ A +L L P SG YVLLSNIYA+ GRW++ +R
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRN 536
Query: 461 WMRENNVKKSPGQSLIE 477
M+ +KK+PG S +E
Sbjct: 537 IMKSKGLKKNPGASNVE 553
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 167/387 (43%), Gaps = 66/387 (17%)
Query: 98 PDEYTFAPLLKACLGV-GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
P E F LL L D+R + VH II S+ + ++ Y S + K
Sbjct: 38 PQETVF--LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARK 95
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
VFDE+ R+VI+ N+MI + V+ G Y E
Sbjct: 96 VFDEIPERNVIIINVMIRSY-----VNNGFY--------------------------GEG 124
Query: 217 LRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVD 276
+++F M D T VL C+ G + IG+ IH A GL + VGN LV
Sbjct: 125 VKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGL-SSTLFVGNGLVS 183
Query: 277 FYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKAT 336
Y KCG L AR V E+ R++VVSWN+++ G A N R + +E+ +M + +S + T
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 337 FVGVLTCCAHAGL--VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIR 394
+L ++ V +++F M G S+V + M+ V ++ EA +L
Sbjct: 244 MASLLPAVSNTTTENVMYVKDMFFKM-GKKSLVS----WNVMIGVYMKNAMPVEAVELYS 298
Query: 395 SMS---IRPNAAIWGSLLSSC----------RTHGHVELAEHAVKELI-NLEPWNSGNYV 440
M P+A S+L +C + HG++E K+LI NL N+
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER-----KKLIPNLLLENA---- 349
Query: 441 LLSNIYAEGGRWDDAETLRMWMRENNV 467
L ++YA+ G + A + M+ +V
Sbjct: 350 -LIDMYAKCGCLEKARDVFENMKSRDV 375
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 174/479 (36%), Positives = 279/479 (58%), Gaps = 8/479 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNE----IKYATKIFN 58
L LL ++ + L IH LR L + + +++C T N+ + YA IF+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 59 QMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRV 118
Q++NP++ +FN +I+ +S + + + IWPD TF L+KA + + V
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
G+ H +I+R GF+ + +V +Y +CG + ++F +M RDV+ M+ G+CK
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
G V+ +F EM R++ +W++MI+ K+ +A+ LF M+ + +E +V+V
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
+ CA LGA++ G+ + Y S + ++ +G ALVD + +CG ++ A +VF+ +P +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLI-LGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+SW+++I GLA +G + + QMI+ G P TF VL+ C+H GLVEK E++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
+M H I P LEHYGC+VD+LGR+G + EA + I M ++PNA I G+LL +C+ + +
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
E+AE LI ++P +SG YVLLSNIYA G+WD E+LR M+E VKK PG SLIE
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/459 (34%), Positives = 273/459 (59%), Gaps = 2/459 (0%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
+++A + ++L+++ V + N I A ++F++ ++ L N+M Y G
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 316
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+ E + +F L+ + G+ PD + + +C + ++ G+ HG ++R+GFE + +I
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
++++Y C + D ++FD MS++ V+ N ++ G+ + G+VD F M E+++VS
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQ-AFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN +IS L + EA+ +F M+ Q D T++++ C LGA+D+ +WI+ Y
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
E +G+ V +G LVD + +CG ++A ++F + ++V +W A I +A G E
Sbjct: 497 EKNGIQLDV-RLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
+EL++ MI +G+ P+ FVG LT C+H GLV++ +E+F SM LH + P HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G + EA LI M + PN IW SLL++CR G+VE+A +A +++ L P +G+
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLLSN+YA GRW+D +R+ M+E ++K PG S I+
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 34/304 (11%)
Query: 45 GTLNEIKYATKIF-NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
GT + +A ++F N + ++NS+I+ Y+ +G E + LF + N GI PD+YTF
Sbjct: 78 GTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTF 137
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
L AC G +HG I++ G+ + ++ +V Y CG++D KVFDEMS
Sbjct: 138 PFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
R+V VSW MI + +A+ LF M
Sbjct: 198 RNV-------------------------------VSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 224 -RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCG 282
RD+ + T+V V+ CA+L ++ G+ ++++ +SG+ + V +ALVD Y KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCN 285
Query: 283 ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLT 342
+D A+ +F E N+ NAM S G + ++ M+ GV P++ + + ++
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 343 CCAH 346
C+
Sbjct: 346 SCSQ 349
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 161/345 (46%), Gaps = 43/345 (12%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
QIH ++ + + L HF + CG E+ A K+F++M +V+ + SMI Y+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECG---ELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 77 LNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+++ V LF ++++ + P+ T ++ AC + DL G+ V+ I SG E
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V++Y C +D ++FDE ++ + N M + ++G L R
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG-------LTR----- 319
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
EAL +F+ M D D ++++ + C++L + G+ H
Sbjct: 320 -------------------EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCH 360
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
Y +G + ++ NAL+D Y KC DTA +F + K VV+WN++++G NG
Sbjct: 361 GYVLRNG-FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEV 419
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+ E +E M K N ++ +++ L E+A E+F SM
Sbjct: 420 DAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
+N +I SG +EA+ LF M + D+ T L CA+ A G IH
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
G Y K + V N+LV FY +CG LD+AR VF E+ +NVVSW +MI G A + V
Sbjct: 162 KMG-YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 320 ELYEQMI-AKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+L+ +M+ + V+PN T V V++ CA +E +++A
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 262/467 (56%), Gaps = 4/467 (0%)
Query: 13 NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRNPSVLLFN 69
+ + L QIHA L+ L Q + + F+S C + + + YA +F+ P L+N
Sbjct: 25 SKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWN 84
Query: 70 SMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRS 129
MI+ +S + E + L+ + + YTF LLKAC + +H +I +
Sbjct: 85 LMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKL 144
Query: 130 GFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLF 189
G+E ++ Y G +FD + D + N +I G+ K G +D L LF
Sbjct: 145 GYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 190 REMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
R+M E++ +SW MIS ++ + EAL+LFHEM++ E D ++ L CA+LGA++
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
G+WIHSY + + V +G L+D Y KCG ++ A VFK I +K+V +W A+ISG
Sbjct: 265 QGKWIHSYLNKTRIRMDSV-LGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY 323
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
A++G G + + +M G+ PN TF VLT C++ GLVE+ + +F SM +++ P
Sbjct: 324 AYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+LGR+G + EA I+ M ++PNA IWG+LL +CR H ++EL E + LI
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
++P++ G YV +NI+A +WD A R M+E V K PG S I
Sbjct: 444 AIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 271/482 (56%), Gaps = 12/482 (2%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMR 61
+L G N Q+H+ + I L S CG +N+ A ++F++M
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND---AQRVFDEMG 214
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ +V+ +NS+I + NGP+ E + +F ++ + PDE T A ++ AC + ++VGQ
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 122 VHGEIIRSGFERFGSI-RIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VHG ++++ R I V++Y C ++ + +FD M R+VI MI G+
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+F +M ER+VVSWN +I+ ++G + EAL LF ++ ++ + +L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKV-----VSVGNALVDFYCKCGILDTARNVFKEIP 295
CA L + +G H + G + + VGN+L+D Y KCG ++ VF+++
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++ VSWNAMI G A NG G +EL+ +M+ G P+ T +GVL+ C HAG VE+ R
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F+SMT + P +HY CMVD+LGR+G + EA +I M ++P++ IWGSLL++C+ H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
++ L ++ ++L+ +EP NSG YVLLSN+YAE G+W+D +R MR+ V K PG S
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSW 634
Query: 476 IE 477
I+
Sbjct: 635 IK 636
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 192/385 (49%), Gaps = 12/385 (3%)
Query: 87 LFALLKNLGIWPDEYTFAPLLKACLG--VGDLRVGQCVHGEIIRSGFERFGSIRIGVVEL 144
L +L + D FA LL +C+ + + V + VH +I+SGF I+ +++
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDA 64
Query: 145 YTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMI 204
Y+ CG ++DG +VFD+M R++ N ++ G K G +D+ LFR M ER +WN M+
Sbjct: 65 YSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMV 124
Query: 205 SSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLY 264
S + R EAL F M + F L+E + +VL C+ L ++ G +HS S
Sbjct: 125 SGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFL 184
Query: 265 RKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQ 324
V +G+ALVD Y KCG ++ A+ VF E+ +NVVSWN++I+ NG +++++
Sbjct: 185 SDVY-IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQM 243
Query: 325 MIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSG 384
M+ V P++ T V++ CA ++ +E+ + + ++ VD+ +
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303
Query: 385 CVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI--NLEPWNSGNYVLL 442
++EA + SM IR N S++S + A ++ N+ WN+ L
Sbjct: 304 RIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA-----L 357
Query: 443 SNIYAEGGRWDDAETLRMWMRENNV 467
Y + G ++A +L ++ +V
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESV 382
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 178/421 (42%), Gaps = 71/421 (16%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G L+E A +F M +NSM+ ++ + EE + FA++ G +EY+FA
Sbjct: 100 GFLDE---ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHR 164
+L AC G+ D+ G VH I +S F I +V++Y+ CG ++D +VFDEM R
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR 216
Query: 165 DVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR 224
+V+ N +I F ++G EAL +F M
Sbjct: 217 NVVSWNSLITCF-------------------------------EQNGPAVEALDVFQMML 245
Query: 225 DQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
+ E DE T+ +V+ CA L A+ +GQ +H + R + + NA VD Y KC +
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 285 DTARNVFKEIP-------------------------------RKNVVSWNAMISGLAFNG 313
AR +F +P +NVVSWNA+I+G NG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 314 RGELGVELYEQMIAKGVSPNKATFVGVLTCCA-----HAGLVEKARELFASMTGLHSIVP 368
E + L+ + + V P +F +L CA H G+ L
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
++ ++D+ + GCV E Y + R M R + W +++ +G+ A +E+
Sbjct: 426 DIFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 429 I 429
+
Sbjct: 485 L 485
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 286/506 (56%), Gaps = 45/506 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQS-----NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVL 66
+N RT L QIHA + + L + LI + +SV G L KYA K+F+++ P V
Sbjct: 23 KNIRT-LKQIHASMVVNGLMSNLSVVGELIYSASLSVPGAL---KYAHKLFDEIPKPDVS 78
Query: 67 LFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEI 126
+ N +++ + + E+ V L+ ++ G+ PD YTF +LKAC + G HG++
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 127 IRSGFERFGSIRIGVVELYTSC-------------------------------GQMDDGM 155
+R GF ++ ++ + +C G++D+ M
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
++FDEM ++D + N+MI G K ++D LF E+ VV+WN MIS G E
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG---- 271
AL +F EMRD D T++++L CA LG ++ G+ +H Y + + VG
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIW 318
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
NAL+D Y KCG +D A VF+ + +++ +WN +I GLA + E +E++E+M V
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVW 377
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYD 391
PN+ TF+GV+ C+H+G V++ R+ F+ M +++I PN++HYGCMVD+LGR+G + EA+
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 392 LIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGR 451
+ SM I PNA +W +LL +C+ +G+VEL ++A ++L+++ SG+YVLLSNIYA G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 452 WDDAETLRMWMRENNVKKSPGQSLIE 477
WD + +R + VKK G SLIE
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIE 523
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 321 bits (823), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 274/479 (57%), Gaps = 10/479 (2%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKL--HQSNLIL-AHFVSVCGTLNEIKYATKIFNQM 60
K+ L+ + + QIHA LRH L H +L + +I+++ +F+Q
Sbjct: 31 KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQT 90
Query: 61 RNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
+P + LF + I S+NG ++ L+ L + I P+E+TF+ LLK+C + G+
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGK 146
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+H +++ G + G+V++Y G + KVFD M R ++ MI + K+G
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF-ELDEATVVAVL 239
+V+ LF M ER +VSWN+MI + G ++AL LF ++ + + DE TVVA L
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 240 PICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNV 299
C+++GA++ G+WIH + +SS + R V V L+D Y KCG L+ A VF + PRK++
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRI-RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 300 VSWNAMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
V+WNAMI+G A +G + + L+ +M G+ P TF+G L CAHAGLV + +F
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHV 418
SM + I P +EHYGC+V +LGR+G ++ AY+ I++M++ ++ +W S+L SC+ HG
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDF 445
Query: 419 ELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L + + LI L NSG YVLLSNIYA G ++ +R M+E + K PG S IE
Sbjct: 446 VLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIE 504
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 318 bits (815), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 262/468 (55%), Gaps = 12/468 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEI--KYATKIFN--QMRNPSVLLFNSMI 72
+ QIH H LR L QS IL + L YA ++ Q RNP L+ ++I
Sbjct: 64 QIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP--FLWTAVI 121
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+ Y++ G +E + ++ ++ I P +TF+ LLKAC + DL +G+ H + R
Sbjct: 122 RGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFR--LR 179
Query: 133 RFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
F + +G ++++Y C +D KVFDEM RDVI +I + + G+++ LF
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+ + +V+W M++ ++ + EAL F M DE TV + CA+LGA
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 251 GQWIHSYAESSGLYRKV-VSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
A+ SG V +G+AL+D Y KCG ++ A NVF + KNV ++++MI GL
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 310 AFNGRGELGVELYEQMIAKG-VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVP 368
A +GR + + L+ M+ + + PN TFVG L C+H+GLV++ R++F SM + P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 369 NLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+HY CMVD+LGR+G ++EA +LI++MS+ P+ +WG+LL +CR H + E+AE A + L
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 429 INLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
LEP GNY+LLSN+YA G W +R ++E +KK+P S +
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 281/475 (59%), Gaps = 39/475 (8%)
Query: 10 HGRNTRTHLTQIHAHFLRHKLHQSNLILA-HFVSVCGTLNE---IKYATKIFNQMRNP-S 64
+G ++ T L QIHA +RH + S+ L H + +L + YA K+F+++ P +
Sbjct: 25 YGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCVH 123
V ++N++I+ Y+ G S L+ ++ G + PD +T+ L+KA + D+R+G+ +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 124 GEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVD 183
+IRSGF GS+ + V+N ++H + GDV
Sbjct: 145 SVVIRSGF---GSL----------------------------IYVQNSLLHLYANCGDVA 173
Query: 184 KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICA 243
+F +M E+ +V+WN +I+ ++G+ EAL L+ EM + + D T+V++L CA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
++GA+ +G+ +H Y GL R + S N L+D Y +CG ++ A+ +F E+ KN VSW
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHS-SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 304 AMISGLAFNGRGELGVELYEQMIA-KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
++I GLA NG G+ +EL++ M + +G+ P + TFVG+L C+H G+V++ E F M
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAE 422
+ I P +EH+GCMVD+L R+G V++AY+ I+SM ++PN IW +LL +C HG +LAE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 423 HAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +++ LEP +SG+YVLLSN+YA RW D + +R M + VKK PG SL+E
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 272/528 (51%), Gaps = 67/528 (12%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+ Q+HA +R LH+ I +S + A ++FNQ++ P+V L NS+I+A+
Sbjct: 33 NQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAH 92
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ N + +F+ ++ G++ D +T+ LLKAC G L V + +H I + G
Sbjct: 93 AQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDI 152
Query: 136 SIRIGVVELYTSCG---------------------------------QMDDGMKVFDEMS 162
+ +++ Y+ CG ++ D ++FDEM
Sbjct: 153 YVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP 212
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD--------- 213
RD+I N M+ G+ + ++ K LF +M ER+ VSW+ M+ K+G
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDK 272
Query: 214 ------------------------SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVD 249
EA RL +M + D A V+++L C G +
Sbjct: 273 MPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332
Query: 250 IGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGL 309
+G IHS + S L V NAL+D Y KCG L A +VF +IP+K++VSWN M+ GL
Sbjct: 333 LGMRIHSILKRSNLGSNAY-VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGL 391
Query: 310 AFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPN 369
+G G+ +EL+ +M +G+ P+K TF+ VL C HAGL+++ + F SM ++ +VP
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 370 LEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELI 429
+EHYGC+VD+LGR G ++EA ++++M + PN IWG+LL +CR H V++A+ + L+
Sbjct: 452 VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLV 511
Query: 430 NLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+P + GNY LLSNIYA W+ +R M+ V+K G S +E
Sbjct: 512 KLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVE 559
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 260/442 (58%), Gaps = 5/442 (1%)
Query: 37 LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGI 96
L H CG L+ A K+F ++ V+ +NSMI + G ++ ++LF +++ +
Sbjct: 172 LIHCYFSCGDLDS---ACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 97 WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMK 156
T +L AC + +L G+ V I + ++ ++++YT CG ++D +
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 157 VFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEA 216
+FD M +D + M+ G+ D + + M ++ +V+WN +IS+ ++G+ +EA
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 217 LRLFHEMRDQA-FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
L +FHE++ Q +L++ T+V+ L CA++GA+++G+WIHSY + G+ R V +AL+
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI-RMNFHVTSALI 407
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
Y KCG L+ +R VF + +++V W+AMI GLA +G G V+++ +M V PN
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGV 467
Query: 336 TFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRS 395
TF V C+H GLV++A LF M + IVP +HY C+VDVLGRSG + +A I +
Sbjct: 468 TFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEA 527
Query: 396 MSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDA 455
M I P+ ++WG+LL +C+ H ++ LAE A L+ LEP N G +VLLSNIYA+ G+W++
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 456 ETLRMWMRENNVKKSPGQSLIE 477
LR MR +KK PG S IE
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIE 609
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 223/491 (45%), Gaps = 82/491 (16%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCG--TLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
L Q H H +R + ++ + ++YA K+F+++ P+ +N++I+A
Sbjct: 45 QLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRA 104
Query: 75 YSLNGPSEEPV-KLFALLKNLG---IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSG 130
Y+ +GP +PV ++A L + +P++YTF L+KA V L +GQ +HG ++S
Sbjct: 105 YA-SGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
+ ++ Y SCG +D KVF + +DV+ N MI+GF +KG DK L LF+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 191 EMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDI 250
+M +SE ++ H T+V VL CA++ ++
Sbjct: 222 KM--------------------ESEDVKASH-----------VTMVGVLSACAKIRNLEF 250
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL-------------------------- 284
G+ + SY E + + +++ NA++D Y KCG +
Sbjct: 251 GRQVCSYIEENRVNVN-LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 285 -----DTARNVFKEIPRKNVVSWNAMISGLAFNGR-GELGVELYEQMIAKGVSPNKATFV 338
+ AR V +P+K++V+WNA+IS NG+ E + +E + K + N+ T V
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
L+ CA G +E R + S H I N ++ + + G + ++ ++ S+
Sbjct: 370 STLSACAQVGALELGRWIH-SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN-SGNYVLLSNIY---AEGGRWDD 454
R + +W +++ HG AV ++ N N V +N++ + G D+
Sbjct: 429 R-DVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDE 484
Query: 455 AETLRMWMREN 465
AE+L M N
Sbjct: 485 AESLFHQMESN 495
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 271/461 (58%), Gaps = 8/461 (1%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
H+ ++ + H +H +++ H + CG +++ A K+F++ ++ +N +I Y
Sbjct: 181 HVLKLRLELVSH-VHNASI---HMFASCG---DMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
G +E+ + ++ L+++ G+ PD+ T L+ +C +GDL G+ + + +G
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ ++++++ CG + + ++FD + R ++ MI G+ + G +D LF +M E+
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
VV WN MI ++ R +AL LF EM+ + DE T++ L C++LGA+D+G WIH
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y E L V++G +LVD Y KCG + A +VF I +N +++ A+I GLA +G
Sbjct: 414 YIEKYSLSLN-VALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCM 376
+ + +MI G++P++ TF+G+L+ C H G+++ R+ F+ M ++ P L+HY M
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 377 VDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNS 436
VD+LGR+G + EA L+ SM + +AA+WG+LL CR HG+VEL E A K+L+ L+P +S
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 437 GNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
G YVLL +Y E W+DA+ R M E V+K PG S IE
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 205/443 (46%), Gaps = 24/443 (5%)
Query: 1 IERKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE---IKYATKIF 57
+ +L LL HL QI A + + L + ++ C L+E + Y+ KI
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCA-LSESRYLDYSVKIL 110
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKACL 111
+ NP++ +N I+ +S SE P + F L K + PD +T+ L K C
Sbjct: 111 KGIENPNIFSWNVTIRGFS---ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 112 GVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNL 171
+ +G + G +++ E + + ++ SCG M++ KVFDE RD++ N
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSV----VSWNLMISSLGKSGRDSEALRLFHEMRDQA 227
+I+G+ K G+ +K +Y+++ M V V+ ++SS G + + +++
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 228 FELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTA 287
+ V A++ + ++ G + + I E R +VS ++ Y +CG+LD +
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK----RTIVS-WTTMISGYARCGLLDVS 342
Query: 288 RNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
R +F ++ K+VV WNAMI G RG+ + L+++M P++ T + L+ C+
Sbjct: 343 RKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 348 GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGS 407
G ++ + + +S+ N+ +VD+ + G + EA + + R N+ + +
Sbjct: 403 GALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTA 460
Query: 408 LLSSCRTHGHVELAEHAVKELIN 430
++ HG A E+I+
Sbjct: 461 IIGGLALHGDASTAISYFNEMID 483
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 269/462 (58%), Gaps = 9/462 (1%)
Query: 20 QIHAHFLRHKLHQSNLI----LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
++H H ++ L SNL L S+CG ++ A +F++ V +N MI Y
Sbjct: 156 KLHCHVVKFGLG-SNLYVQNALVKMYSLCGLMD---MARGVFDRRCKEDVFSWNLMISGY 211
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
+ EE ++L ++ + P T +L AC V D + + VH + E
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +V Y +CG+MD +++F M RDVI ++ G+ ++G++ F +M R
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+SW +MI ++G +E+L +F EM+ DE T+V+VL CA LG+++IG+WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+Y + + + VV VGNAL+D Y KCG + A+ VF ++ +++ +W AM+ GLA NG+G
Sbjct: 392 TYIDKNKIKNDVV-VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
+ ++++ QM + P+ T++GVL+ C H+G+V++AR+ FA M H I P+L HYGC
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR+G V+EAY+++R M + PN+ +WG+LL + R H +AE A K+++ LEP N
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
Y LL NIYA RW D +R + + +KK+PG SLIE
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 199/431 (46%), Gaps = 27/431 (6%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAH-FVSVCGTLN-EIKYATKIFNQMRNPSVLLFNSM 71
T Q+H+ + + + FV C L + YA K+F ++ P V+++N+M
Sbjct: 46 TTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNM 105
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACL-GVGDLRVGQCVHGEIIRSG 130
IK +S E V+L+ + G+ PD +TF LL G L G+ +H +++ G
Sbjct: 106 IKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFG 165
Query: 131 FERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFR 190
++ +V++Y+ CG MD VFD DV NLMI G+ + + ++ + L
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 191 EMRERSVVSWN----LMISSLGKSGRDSEALRLFHEM-----RDQAFELDEATVVAVLPI 241
EM ER++VS L++ S +D + + HE + + L+ A V A
Sbjct: 226 EM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY--- 281
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
A G +DI I ++ R V+S ++V Y + G L AR F ++P ++ +S
Sbjct: 282 -AACGEMDIAVRIFRSMKA----RDVIS-WTSIVKGYVERGNLKLARTYFDQMPVRDRIS 335
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W MI G G +E++ +M + G+ P++ T V VLT CAH G +E E +
Sbjct: 336 WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYI 394
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I ++ ++D+ + GC +A + M R + W +++ +G
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR-DKFTWTAMVVGLANNGQ---G 450
Query: 422 EHAVKELINLE 432
+ A+K ++
Sbjct: 451 QEAIKVFFQMQ 461
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 265/476 (55%), Gaps = 5/476 (1%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNE--IKYATKIFNQMRNP 63
+ LL T + QIHA + + ++ HFV + + YA +I ++ P
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG--IWPDEYTFAPLLKACLGVGDLRVGQC 121
++ NSMI+A+ + E+ + + + G + PD YT L++AC G+ G
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
VHG IR GF+ ++ G++ LY G +D KVF+ + D + R M+ + GD
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
V LF M ER ++WN MIS + G EAL +FH M+ + +++ +++VL
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
C +LGA+D G+W HSY E + + + V + LVD Y KCG ++ A VF + KNV +
Sbjct: 250 CTQLGALDQGRWAHSYIERNKI-KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
W++ ++GLA NG GE +EL+ M GV+PN TFV VL C+ G V++ + F SM
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
I P LEHYGC+VD+ R+G + +A +I+ M ++P+AA+W SLL + R + ++EL
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A K+++ LE N G YVLLSNIYA+ WD+ +R M+ V+K PG S++E
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVME 484
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 277/507 (54%), Gaps = 36/507 (7%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTL--NEIKYATKIFNQMRNP 63
L LL+ LTQIH F+++ + + + C + + YA ++ P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG-IWPDEYTFAPLLKACLGVGDLRVGQCV 122
+FN++++ YS + V +F + G ++PD ++FA ++KA LR G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVI--------------- 167
H + ++ G E + ++ +Y CG ++ KVFDEM +++
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 168 -----------VRN-----LMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSG 211
VRN +M+ G+ K G+++ +F EM R VSW+ MI + +G
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 212 RDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVG 271
+E+ F E++ +E ++ VL C++ G+ + G+ +H + E +G Y +VSV
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG-YSWIVSVN 307
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKN-VVSWNAMISGLAFNGRGELGVELYEQMIAKGV 330
NAL+D Y +CG + AR VF+ + K +VSW +MI+GLA +G+GE V L+ +M A GV
Sbjct: 308 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 331 SPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAY 390
+P+ +F+ +L C+HAGL+E+ + F+ M ++ I P +EHYGCMVD+ GRSG +++AY
Sbjct: 368 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 427
Query: 391 DLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGG 450
D I M I P A +W +LL +C +HG++ELAE + L L+P NSG+ VLLSN YA G
Sbjct: 428 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 487
Query: 451 RWDDAETLRMWMRENNVKKSPGQSLIE 477
+W D ++R M +KK+ SL+E
Sbjct: 488 KWKDVASIRKSMIVQRIKKTTAWSLVE 514
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 311 bits (797), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 279/476 (58%), Gaps = 5/476 (1%)
Query: 6 LRLLHGR-NTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC-GTLNEIKYATKIFNQMRNP 63
LRL+ + +T L QIHA ++ L + + ++ C + +++ YA +F ++ +
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK 87
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLF--ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+ ++N++I+ +S + E + +F L + + P T+ + KA +G R G+
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG +I+ G E IR ++ +Y +CG + + ++F M DV+ N MI GF K G
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
+D+ LF EM +R+ VSWN MIS ++GR +AL +F EM+++ + D T+V++L
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 242 CARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVS 301
CA LGA + G+WIH Y + + V AL+D YCKCG ++ NVF+ P+K +
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVV-TALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 302 WNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT 361
WN+MI GLA NG E ++L+ ++ G+ P+ +F+GVLT CAH+G V +A E F M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 362 GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ I P+++HY MV+VLG +G + EA LI++M + + IW SLLS+CR G+VE+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 422 EHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ A K L L+P + YVLLSN YA G +++A R+ M+E ++K G S IE
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIE 502
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/481 (35%), Positives = 264/481 (54%), Gaps = 40/481 (8%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCG---TLNEIKYATKIFNQMR 61
+L L+ + HL QIHA LR L +++ + HF+S +I Y+ ++F+Q
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQ 120
NP++ N+MI+A+SL+ E +LF +L +N + + + + LK C+ GDL G
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 121 CVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
+HG+I GF + +++LY++C D KVFDE+ RD
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT-------------- 179
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR---DQAFELDEATVVA 237
VSWN++ S ++ R + L LF +M+ D + D T +
Sbjct: 180 -----------------VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLL 222
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
L CA LGA+D G+ +H + + +GL +++ N LV Y +CG +D A VF + +
Sbjct: 223 ALQACANLGALDFGKQVHDFIDENGL-SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
NVVSW A+ISGLA NG G+ +E + +M+ G+SP + T G+L+ C+H+GLV + F
Sbjct: 282 NVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFF 341
Query: 358 ASM-TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHG 416
M +G I PNL HYGC+VD+LGR+ + +AY LI+SM ++P++ IW +LL +CR HG
Sbjct: 342 DRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
VEL E + LI L+ +G+YVLL N Y+ G+W+ LR M+E + PG S I
Sbjct: 402 DVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAI 461
Query: 477 E 477
E
Sbjct: 462 E 462
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/519 (35%), Positives = 266/519 (51%), Gaps = 71/519 (13%)
Query: 26 LRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQ--MRNPSVLLFNSMIKAYSLNGPSEE 83
LRH + + I F+ + + I YA K+F+Q R+ S L NSMIKAY +
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDS-FLSNSMIKAYLETRQYPD 60
Query: 84 PVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
L+ L K PD +TF L K+C + G +H +I R GF + GVV
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 143 EL-------------------------------YTSCGQMD------------------- 152
++ Y CG++D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 153 ---DGM----------KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
DG ++FDEM+H+ VI MIHG+C D+D LF M ER++VS
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 200 WNLMISSLGKSGRDSEALRLFHEMR-DQAFELDEATVVAVLPICARLGAVDIGQWIHSYA 258
WN MI ++ + E +RLF EM+ + + D+ T+++VLP + GA+ +G+W H +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 259 ESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELG 318
+ L +KV V A++D Y KCG ++ A+ +F E+P K V SWNAMI G A NG
Sbjct: 301 QRKKLDKKV-KVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAA 359
Query: 319 VELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD 378
++L+ M+ + P++ T + V+T C H GLVE+ R+ F M + + +EHYGCMVD
Sbjct: 360 LDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVD 417
Query: 379 VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGN 438
+LGR+G ++EA DLI +M PN I S LS+C + +E AE +K+ + LEP N GN
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGN 477
Query: 439 YVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
YVLL N+YA RWDD ++ MR+N KK G SLIE
Sbjct: 478 YVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 22 HAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPS 81
H R KL + + + + EI+ A +IF++M V +N+MI Y+LNG +
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 82 EEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ LF + + PDE T ++ A C HG ++ G + F +R
Sbjct: 357 RAALDLFVTMM-IEEKPDEITMLAVITA-----------CNHGGLVEEGRKWFHVMR 401
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 304 bits (779), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 162/486 (33%), Positives = 263/486 (54%), Gaps = 35/486 (7%)
Query: 23 AHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSE 82
A ++ L+Q ++ F++ C + + A QM+ P+V ++N++ K +
Sbjct: 49 AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 108
Query: 83 EPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVV 142
++L+ + + P YT++ L+KA R G+ + I + GF I+ ++
Sbjct: 109 RSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLI 166
Query: 143 ELYTSCGQMDDGMKVFDEMSHRDVI-------------------------------VRNL 171
+ Y++ G++ + KVFDEM RD I N
Sbjct: 167 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 226
Query: 172 MIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELD 231
+I+G+ G++++ LF +M + ++SW MI ++ R EA+ +F++M ++ D
Sbjct: 227 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 286
Query: 232 EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVF 291
E T+ V+ CA LG ++IG+ +H Y +G V +G+ALVD Y KCG L+ A VF
Sbjct: 287 EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY-IGSALVDMYSKCGSLERALLVF 345
Query: 292 KEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
+P+KN+ WN++I GLA +G + ++++ +M + V PN TFV V T C HAGLV+
Sbjct: 346 FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVD 405
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ R ++ SM +SIV N+EHYG MV + ++G + EA +LI +M PNA IWG+LL
Sbjct: 406 EGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDG 465
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK-S 470
CR H ++ +AE A +L+ LEP NSG Y LL ++YAE RW D +R MRE ++K
Sbjct: 466 CRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKIC 525
Query: 471 PGQSLI 476
PG S I
Sbjct: 526 PGTSSI 531
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 304 bits (779), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 176/480 (36%), Positives = 268/480 (55%), Gaps = 7/480 (1%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHK-LHQSNLILAHFVSVCGTLNEIKYATKIFNQMR 61
+ L L+ + + + QIH H + L N + V L A K+F +M
Sbjct: 134 QTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMP 193
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P V FN MI Y+ G S E +KL+ + + GI PDEYT LL C + D+R+G+
Sbjct: 194 HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKG 253
Query: 122 VHGEIIRSGFERFGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKK 179
VHG I R G ++ + ++++Y C + + FD M +D+ N M+ GF +
Sbjct: 254 VHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRL 313
Query: 180 GDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR-LFHEMRD-QAFELDEATVVA 237
GD++ +F +M +R +VSWN ++ K G D +R LF+EM + + D T+V+
Sbjct: 314 GDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVS 373
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRK 297
++ A G + G+W+H L + + +AL+D YCKCGI++ A VFK K
Sbjct: 374 LISGAANNGELSHGRWVHGLVIRLQL-KGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 298 NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELF 357
+V W +MI+GLAF+G G+ ++L+ +M +GV+PN T + VLT C+H+GLVE+ +F
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVF 492
Query: 358 ASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI-RSMSIRPNAAIWGSLLSSCRTHG 416
M P EHYG +VD+L R+G V EA D++ + M +RP+ ++WGS+LS+CR
Sbjct: 493 NHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGE 552
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLI 476
+E AE A+ EL+ LEP G YVLLSNIYA GRW ++ R M VKK+ G S +
Sbjct: 553 DIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 201/460 (43%), Gaps = 88/460 (19%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAH--FVSVCGTLNEIKYATKIF-NQMRN 62
L LL N+R Q+ A +R L ++ F S + A +F N N
Sbjct: 38 LVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPN 97
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P+V ++N+MI A S E L++ + + PD TF L+KA + +++ +
Sbjct: 98 PNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---I 152
Query: 123 HGEIIRSGFERFGS-IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
H II SG G+ + +V+ Y G KVF M H DV N+MI G+ K+G
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG- 211
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPI 241
++L EAL+L+ +M E DE TV+++L
Sbjct: 212 ------------------FSL------------EALKLYFKMVSDGIEPDEYTVLSLLVC 241
Query: 242 CARLGAVDIGQWIHSYAESSG-LYRKVVSVGNALVDFYCKC------------------- 281
C L + +G+ +H + E G +Y + + NAL+D Y KC
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 282 ------------GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE--LYEQMIA 327
G ++ A+ VF ++P++++VSWN+++ G + G + V YE I
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 328 KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG------CMVDVLG 381
+ V P++ T V +++ A+ G + R +H +V L+ G ++D+
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGR-------WVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 382 RSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ G + A+ + ++ + + A+W S+++ HG+ + A
Sbjct: 415 KCGIIERAFMVFKT-ATEKDVALWTSMITGLAFHGNGQQA 453
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 260/472 (55%), Gaps = 38/472 (8%)
Query: 12 RNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSM 71
R++ + ++H H L + Q + + + L + YA K+F++ R ++ ++N++
Sbjct: 90 RSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 72 IKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG----VGDLRVGQCVHGEII 127
+A +L G EE + L+ + +G+ D +T+ +LKAC+ V L G+ +H +
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
R G+ I +V++Y + G VD Y
Sbjct: 210 RRGYSSHVYIMTTLVDMYA-------------------------------RFGCVDYASY 238
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE--LDEATVVAVLPICARL 245
+F M R+VVSW+ MI+ K+G+ EALR F EM + + + T+V+VL CA L
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
A++ G+ IH Y GL ++ V +ALV Y +CG L+ + VF + ++VVSWN++
Sbjct: 299 AALEQGKLIHGYILRRGL-DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
IS +G G+ ++++E+M+A G SP TFV VL C+H GLVE+ + LF +M H
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
I P +EHY CMVD+LGR+ + EA +++ M P +WGSLL SCR HG+VELAE A
Sbjct: 418 IKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERAS 477
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ L LEP N+GNYVLL++IYAE WD+ + ++ + ++K PG+ +E
Sbjct: 478 RRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 46/285 (16%)
Query: 167 IVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQ 226
I N +I CK+G + + + + + S ++ L+I G S+ALR+ + D
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDN 106
Query: 227 AFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDT 286
+ D ++ + + LG+VD
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDY------------------------------------ 130
Query: 287 ARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAH 346
AR VF + ++ + WNA+ L G GE + LY +M GV ++ T+ VL C
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 347 AGL----VEKARELFASMT--GLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRP 400
+ + K +E+ A +T G S V + +VD+ R GCV A + M +R
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMT---TLVDMYARFGCVDYASYVFGGMPVR- 246
Query: 401 NAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNI 445
N W ++++ +G A +E++ +S N V + ++
Sbjct: 247 NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 265/470 (56%), Gaps = 10/470 (2%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGT-LNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
HL Q+ + + L S+ + + C L + YA IF++ P+ L+ +++ AY
Sbjct: 39 HLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAY 98
Query: 76 SLNGP--SEEPVKLFALLKNLGI-WPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
S + P + F L+ N + P+ + + +LK+ + VH + +SGF
Sbjct: 99 SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFH 158
Query: 133 RFGSIRIGVVELY-TSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
+ ++ ++ Y +S + ++FDEMS R+V+ M+ G+ + GD+ + LF +
Sbjct: 159 LYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFED 218
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEM-RDQAFELDEATVVAVLPICARLGAVDI 250
M ER V SWN ++++ ++G EA+ LF M + + +E TVV VL CA+ G + +
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 251 GQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
+ IH++A L V V N+LVD Y KCG L+ A +VFK +K++ +WN+MI+ A
Sbjct: 279 AKGIHAFAYRRDLSSDVF-VSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 311 FNGRGELGVELYEQMIA---KGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIV 367
+GR E + ++E+M+ + P+ TF+G+L C H GLV K R F MT I
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 368 PNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKE 427
P +EHYGC++D+LGR+G EA +++ +M ++ + AIWGSLL++C+ HGH++LAE AVK
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 428 LINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
L+ L P N G +++N+Y E G W++A R ++ N K PG S IE
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIE 507
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 249/417 (59%), Gaps = 4/417 (0%)
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
N ++ +N+MI Y G +E +++ + + GI DE+T+ +++AC G L++G+
Sbjct: 248 NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ 307
Query: 122 VHGEIIRSGFERFG-SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKG 180
VH ++R E F +V LY CG+ D+ +F++M +D++ N ++ G+ G
Sbjct: 308 VHAYVLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSG 365
Query: 181 DVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLP 240
+ + +F+EM+E++++SW +MIS L ++G E L+LF M+ + FE + +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 241 ICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVV 300
CA LGA GQ H+ G + +S GNAL+ Y KCG+++ AR VF+ +P + V
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 301 SWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
SWNA+I+ L +G G V++YE+M+ KG+ P++ T + VLT C+HAGLV++ R+ F SM
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
++ I P +HY ++D+L RSG +A +I S+ +P A IW +LLS CR HG++EL
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 421 AEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
A +L L P + G Y+LLSN++A G+W++ +R MR+ VKK S IE
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 234/564 (41%), Gaps = 130/564 (23%)
Query: 12 RNTRTHLTQ-IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS------ 64
R T L + +H + + IL + V +E+ YA ++F+++ P
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 65 ---------------------------VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIW 97
+++N+MI +S N + LF +K+ G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 98 PDEYTFAPLLKACLGVGDLRVGQCV--HGEIIRSGFERFGSIRIGVVELYTSCGQ----M 151
PD +TFA +L V D QCV H ++SG S+ +V +Y+ C +
Sbjct: 146 PDNFTFASVLAGLALVADDE-KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 152 DDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER-SVVSWNLMISSLGKS 210
KVFDE+ +D M+ G+ K G D G L M + +V++N MIS
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264
Query: 211 GRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS- 269
G EAL + M ELDE T +V+ CA G + +G+ +H+Y L R+ S
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV----LRREDFSF 320
Query: 270 -VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNA------------------------ 304
N+LV Y KCG D AR +F+++P K++VSWNA
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 305 -------MISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA-----------H 346
MISGLA NG GE G++L+ M +G P F G + CA H
Sbjct: 381 NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 347 A------------------------GLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGR 382
A G+VE+AR++F +M L S+ N ++ LG+
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWN-----ALIAALGQ 495
Query: 383 SGCVREAYDLIRSM---SIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE-----PW 434
G EA D+ M IRP+ ++L++C H L + K ++E P
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC---SHAGLVDQGRKYFDSMETVYRIPP 552
Query: 435 NSGNYVLLSNIYAEGGRWDDAETL 458
+ +Y L ++ G++ DAE++
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESV 576
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 103 FAPLLKACLGV--GDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDE 160
+A L+ CL + L++ + VHG II GF+ I ++++Y +++ ++FDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 161 MSHRDVIVRNLMIHGFCKKGDVD--KGLYLFREMRERSVVSWNLMISSLGKSGRDSEALR 218
+S D I R M+ G+C GD+ +G++ + R V +N MI+ + A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 219 LFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI--HSYAESSGLYRKVVSVGNALVD 276
LF +M+ + F+ D T +VL A L A D Q + H+ A SG + SV NALV
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGA-GYITSVSNALVS 192
Query: 277 FYCKCG----ILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYE--------- 323
Y KC +L +AR VF EI K+ SW M++G NG +LG EL E
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 324 -----------------------QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
+M++ G+ ++ T+ V+ CA AGL++ +++ A +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 361 TGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVEL 420
+ ++ +V + + G EA + M + + W +LLS + GH+
Sbjct: 313 LRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGE 369
Query: 421 AEHAVKEL 428
A+ KE+
Sbjct: 370 AKLIFKEM 377
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 298 bits (763), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 251/465 (53%), Gaps = 36/465 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L Q+HAH + +S +L +++ + I Y +F + P LFNS+IK+ S
Sbjct: 24 QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
V + + + + P YTF ++K+C + LR+G+ VH + SGF
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
++ +V Y+ CG M+ +V F M E+S
Sbjct: 144 VQAALVTFYSKCGDMEGARQV-------------------------------FDRMPEKS 172
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V+WN ++S ++G EA+++F++MR+ FE D AT V++L CA+ GAV +G W+H
Sbjct: 173 IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ 232
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
Y S GL V +G AL++ Y +CG + AR VF ++ NV +W AMIS +G G+
Sbjct: 233 YIISEGLDLN-VKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 317 LGVELYEQMIAK-GVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
VEL+ +M G PN TFV VL+ CAHAGLVE+ R ++ MT + ++P +EH+ C
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNA---AIWGSLLSSCRTHGHVELAEHAVKELINLE 432
MVD+LGR+G + EAY I + A A+W ++L +C+ H + +L K LI LE
Sbjct: 352 MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALE 411
Query: 433 PWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
P N G++V+LSNIYA G+ D+ +R M NN++K G S+IE
Sbjct: 412 PDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 258/444 (58%), Gaps = 13/444 (2%)
Query: 34 NLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKN 93
N +L FV +I A + F+ M V+ +N++I Y+ +G +E +LF +
Sbjct: 223 NCLLGGFVKK----KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----D 274
Query: 94 LGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDD 153
D +T+ ++ + + + + ++ + ++ G Y +M+
Sbjct: 275 ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG----YVQGERMEM 330
Query: 154 GMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRD 213
++FD M R+V N MI G+ + G + + LF +M +R VSW MI+ +SG
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EALRLF +M + L+ ++ + L CA + A+++G+ +H G Y VGNA
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG-YETGCFVGNA 449
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+ YCKCG ++ A ++FKE+ K++VSWN MI+G + +G GE+ + +E M +G+ P+
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
AT V VL+ C+H GLV+K R+ F +MT + ++PN +HY CMVD+LGR+G + +A++L+
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
++M P+AAIWG+LL + R HG+ ELAE A ++ +EP NSG YVLLSN+YA GRW
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWG 629
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
D LR+ MR+ VKK PG S IE
Sbjct: 630 DVGKLRVRMRDKGVKKVPGYSWIE 653
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 176/406 (43%), Gaps = 54/406 (13%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E + A K+F++M ++ +N MIK Y N +NLG + + P
Sbjct: 110 EFELARKLFDEMPERDLVSWNVMIKGYVRN-------------RNLGKARELFEIMPERD 156
Query: 109 ACLGVGDLRVGQCVHG--EIIRSGFERFGSIRI----GVVELYTSCGQMDDGMKVFDEMS 162
C + G +G + RS F+R ++ Y +M++ +F
Sbjct: 157 VC-SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 163 HRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHE 222
+ ++ N ++ GF KK + + F M R VVSWN +I+ +SG+ EA +LF E
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 223 --------------------MRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESS 261
M ++A EL D+ + A L G+ + E
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 262 GLYR-KVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
+ + VS N ++ Y +CG + A+N+F ++P+++ VSW AMI+G + +G +
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVD-- 378
L+ QM +G N+++F L+ CA +E ++L +V GC V
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHG------RLVKGGYETGCFVGNA 449
Query: 379 ---VLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
+ + G + EA DL + M+ + + W ++++ HG E+A
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 33/325 (10%)
Query: 116 LRVGQCVHGEIIRSGFERFGSIRI-GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
+R G+C + R+ S+ G++ Y G+ + K+FDEM RD++ N+MI
Sbjct: 75 MRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIK 134
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD--------- 225
G+ + ++ K LF M ER V SWN M+S ++G +A +F M +
Sbjct: 135 GYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 226 -----QAFELDEATVV--------AVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGN 272
Q +++EA ++ V C G V + + + + + V N
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN 254
Query: 273 ALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSP 332
++ Y + G +D AR +F E P ++V +W AM+SG N E EL+++M +
Sbjct: 255 TIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER---- 310
Query: 333 NKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDL 392
N+ ++ +L +E A+ELF M N+ + M+ + G + EA +L
Sbjct: 311 NEVSWNAMLAGYVQGERMEMAKELFDVMP-----CRNVSTWNTMITGYAQCGKISEAKNL 365
Query: 393 IRSMSIRPNAAIWGSLLSSCRTHGH 417
M R + W ++++ GH
Sbjct: 366 FDKMPKR-DPVSWAAMIAGYSQSGH 389
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 78/346 (22%)
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y G+ ++ ++VF M + N MI G+ + G+ + LF EM ER +VSW
Sbjct: 70 AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW 129
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N+MI ++ +A LF M ++ D+ W
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPER----------------------DVCSW------- 160
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
N ++ Y + G +D AR+VF +P KN VSWNA++S N + E
Sbjct: 161 -----------NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 321 LYEQ-----------MIAKGVSPNK----------------ATFVGVLTCCAHAGLVEKA 353
L++ ++ V K ++ ++T A +G +++A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
R+LF S V ++ + MV ++ V EA +L M R N W ++L+
Sbjct: 270 RQLFD-----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER-NEVSWNAMLAGYV 323
Query: 414 THGHVELAEHAVKELINLEPW-NSGNYVLLSNIYAEGGRWDDAETL 458
+E+A KEL ++ P N + + YA+ G+ +A+ L
Sbjct: 324 QGERMEMA----KELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 272 NALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVS 331
N + Y + G + A VFK +PR + VS+N MISG NG EL +L+++M + +
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 332 PNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLE--HYGCMVDVLGRSGCVREA 389
G + + KARELF I+P + + M+ ++GCV +A
Sbjct: 128 SWNVMIKGYV----RNRNLGKARELF-------EIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWN 435
+ M + N W +LLS+ + +E A K N L WN
Sbjct: 177 RSVFDRMPEK-NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN 223
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 256/439 (58%), Gaps = 12/439 (2%)
Query: 50 IKYATKIFN-QMRNPSVLLFNSMIKAYSLNGPSEE---PVKLFALLKNLGIWPDEYTFAP 105
I YA IF+ + L+N +I+A N S + P+ ++ ++N + PD +TF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
LL + L +GQ H +I+ G ++ +R ++ +Y+SCG + +VFD+ +D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMR- 224
+ N +++ + K G +D LF EM ER+V+SW+ +I+ G+ EAL LF EM+
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 225 ---DQAF-ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCK 280
++AF +E T+ VL C RLGA++ G+W+H+Y + + +V +G AL+D Y K
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIV-LGTALIDMYAK 246
Query: 281 CGILDTARNVFKEI-PRKNVVSWNAMISGLAFNGRGELGVELYEQMI-AKGVSPNKATFV 338
CG L+ A+ VF + +K+V +++AMI LA G + +L+ +M + ++PN TFV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 339 GVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI 398
G+L C H GL+ + + F M I P+++HYGCMVD+ GRSG ++EA I SM +
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 399 RPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETL 458
P+ IWGSLLS R G ++ E A+K LI L+P NSG YVLLSN+YA+ GRW + + +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 459 RMWMRENNVKKSPGQSLIE 477
R M + K PG S +E
Sbjct: 427 RHEMEVKGINKVPGCSYVE 445
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 244/434 (56%), Gaps = 37/434 (8%)
Query: 45 GTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFA 104
G LN+ A K+F+++ + SV+ + ++ Y+ +G E + LF + +G+ PD Y
Sbjct: 160 GRLND---AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIV 216
Query: 105 PLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMS-H 163
+L AC+ VGDL G+ + +K +EM
Sbjct: 217 QVLSACVHVGDLDSGEWI--------------------------------VKYMEEMEMQ 244
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
++ VR +++ + K G ++K +F M E+ +V+W+ MI + E + LF +M
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
+ + D+ ++V L CA LGA+D+G+W S + + + NAL+D Y KCG
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF-MANALIDMYAKCGA 363
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
+ VFKE+ K++V NA ISGLA NG +L ++ Q G+SP+ +TF+G+L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C HAGL++ F +++ ++++ +EHYGCMVD+ GR+G + +AY LI M +RPNA
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+WG+LLS CR +LAE +KELI LEPWN+GNYV LSNIY+ GGRWD+A +R M
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 544 KKGMKKIPGYSWIE 557
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 34/419 (8%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRN 62
++I L+ T HL QIH + H LH ++ + + KY+ +F+ +
Sbjct: 14 QQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF 73
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++ L+NS+I + N E + LF ++ G++ +TF +LKAC ++G +
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
H +++ GF + ++ +Y+ G+++D K+FDE+ R V+ + G+
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT----- 188
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
SGR EA+ LF +M + + D +V VL C
Sbjct: 189 --------------------------TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
+G +D G+WI Y E + +K V LV+ Y KCG ++ AR+VF + K++V+W
Sbjct: 223 VHVGDLDSGEWIVKYMEEMEM-QKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTG 362
+ MI G A N + G+EL+ QM+ + + P++ + VG L+ CA G ++ E S+
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLID 340
Query: 363 LHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELA 421
H + NL ++D+ + G + +++ + M + I + +S +GHV+L+
Sbjct: 341 RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 295 bits (755), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 246/431 (57%), Gaps = 5/431 (1%)
Query: 44 CGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTF 103
CG +NE + +F++ N V+L+NSMI Y N E + LF ++N D T
Sbjct: 266 CGRVNE---SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTL 321
Query: 104 APLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSH 163
A ++ AC+G+G L G+ +H + G + ++++Y+ CG + K+F E+
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 164 RDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEM 223
D I+ N MI + G +D +F + +S++SWN M + ++G E L FH+M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 224 RDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI 283
DE ++ +V+ CA + ++++G+ + + A GL V V ++L+D YCKCG
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGF 500
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ R VF + + + V WN+MISG A NG+G ++L+++M G+ P + TF+ VLT
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTA 560
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C + GLVE+ R+LF SM H VP+ EH+ CMVD+L R+G V EA +L+ M + +
Sbjct: 561 CNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGS 620
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
+W S+L C +G+ + + A +++I LEP NS YV LS I+A G W+ + +R MR
Sbjct: 621 MWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMR 680
Query: 464 ENNVKKSPGQS 474
ENNV K+PG S
Sbjct: 681 ENNVTKNPGSS 691
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 191/404 (47%), Gaps = 46/404 (11%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
E+ A ++FN M V+ NS++ Y LNG +EE ++LF K L D T +LK
Sbjct: 139 ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF---KELNFSADAITLTTVLK 195
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC + L+ G+ +H +I+ G E + +V +Y CG + + +++ D
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
+ +I G+ G V++ LF R V+ WN MIS + EAL LF+EMR++
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR 315
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGI----- 283
E D T+ AV+ C LG ++ G+ +H +A GL +V V + L+D Y KCG
Sbjct: 316 E-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV-VASTLLDMYSKCGSPMEAC 373
Query: 284 --------------------------LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGEL 317
+D A+ VF+ I K+++SWN+M +G + NG
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 318 GVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMT--GLHS--IVPNLEHY 373
+E + QM + ++ + V++ CA +E ++FA T GL S +V +
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS---- 489
Query: 374 GCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH 417
++D+ + G V + +M ++ + W S++S T+G
Sbjct: 490 -SLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ 531
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 164/411 (39%), Gaps = 73/411 (17%)
Query: 103 FAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI---GVVELYTSCGQMDDGMKVFD 159
+ LL++C + + +G +++ GF SI I ++++Y+ G+M +FD
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGF--LSSIVIVANHLLQMYSRSGKMGIARNLFD 86
Query: 160 EMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRL 219
EM R+ N MI G+ G+ L F M ER SWN+++S K+G S A RL
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 220 FHEM----------------------------RDQAFELDEATVVAVLPICARLGAVDIG 251
F+ M ++ F D T+ VL CA L A+ G
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCG 206
Query: 252 QWIHSY----------AESSGLYRKVVSVGN--------------------ALVDFYCKC 281
+ IH+ +S L G+ AL+ Y C
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 282 GILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVL 341
G ++ +R +F + V+ WN+MISG N + L+ +M + T V+
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVI 325
Query: 342 TCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPN 401
C G +E +++ ++ ++ ++D+ + G EA L + +
Sbjct: 326 NACIGLGFLETGKQMHCHACKF-GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYD 383
Query: 402 AAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVLLSNIYAEGG 450
+ S++ + G ++ A+ + + N L WNS ++N +++ G
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS-----MTNGFSQNG 429
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 69/342 (20%)
Query: 20 QIHAHFLRHKLHQSNLI---LAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY- 75
Q+H H + L ++ L S CG+ E A K+F+++ + +L NSMIK Y
Sbjct: 339 QMHCHACKFGLIDDIVVASTLLDMYSKCGSPME---ACKLFSEVESYDTILLNSMIKVYF 395
Query: 76 ------------------------------SLNGPSEEPVKLFALLKNLGIWPDEYTFAP 105
S NG + E ++ F + L + DE + +
Sbjct: 396 SCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSS 455
Query: 106 LLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRD 165
++ AC + L +G+ V G + + +++LY CG ++ G +VFD M D
Sbjct: 456 VISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSD 515
Query: 166 VIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRD 225
+ N MI G+ +G+ EA+ LF +M
Sbjct: 516 EVPWNSMISGY-------------------------------ATNGQGFEAIDLFKKMSV 544
Query: 226 QAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILD 285
+ T + VL C G V+ G+ + + + + +VD + G ++
Sbjct: 545 AGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVE 604
Query: 286 TARNVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMI 326
A N+ +E+P + W++++ G NG +G + E++I
Sbjct: 605 EAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKII 646
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 226 QAFELD-EATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGIL 284
QA E+D V +L C+ + + + G +V V N L+ Y + G +
Sbjct: 19 QAMEVDCRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKM 78
Query: 285 DTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK-GVSPNKATFVGVLTC 343
ARN+F E+P +N SWN MI G +G + ++ M + G S N V++
Sbjct: 79 GIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNV-----VVSG 133
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
A AG + AR LF +M + N +G +++ G EA L + ++ +A
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAI 188
Query: 404 IWGSLLSSC 412
++L +C
Sbjct: 189 TLTTVLKAC 197
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 273/542 (50%), Gaps = 74/542 (13%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
L+ + L QIHA L L S ++ + + +I +A ++F+ + P +
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+N++I+ YS N ++ + +++ ++ + PD +TF LLKAC G+ L++G+ VH ++
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 128 RSGFE-----------------RFGSIRI----------------GVVELYTSCGQMDDG 154
R GF+ R GS R +V Y G+ +
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 155 MKVFDEMSHRDV-------------------IVRNLMIHG-------------------- 175
+++F +M DV + + IH
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 176 FCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATV 235
+ K G V LF +M+ +++ WN MIS K+G EA+ +FHEM ++ D ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 236 VAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIP 295
+ + CA++G+++ + ++ Y S YR V + +AL+D + KCG ++ AR VF
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSD-YRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 296 RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARE 355
++VV W+AMI G +GR + LY M GV PN TF+G+L C H+G+V +
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445
Query: 356 LFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTH 415
F M H I P +HY C++D+LGR+G + +AY++I+ M ++P +WG+LLS+C+ H
Sbjct: 446 FFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 416 GHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSL 475
HVEL E+A ++L +++P N+G+YV LSN+YA WD +R+ M+E + K G S
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 476 IE 477
+E
Sbjct: 565 VE 566
>sp|Q9FLS9|PP441_ARATH Pentatricopeptide repeat-containing protein At5g61800
OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1
Length = 499
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 256/483 (53%), Gaps = 21/483 (4%)
Query: 14 TRTHLTQIHAHFLRH----KLHQSNLILAHFV--------SVCGTLNEIKYATKIFNQMR 61
T HL Q HA F+ + N + A+ + S + + YAT +F +
Sbjct: 16 TLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFIT 75
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVK-LFALLKNLGIWPDEYTFAPLLKACLGV--GDLRV 118
NPS FN++I+ +L+ PS K F ++ + PD +TF + KAC GDL +
Sbjct: 76 NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 119 GQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCK 178
+ +H + +R G ++ +Y+ +D +++FDE RDV+ N++I G K
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 179 KGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAV 238
++ + LF M R +VSWN +IS + EA++LF EM + D +V+
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 239 LPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKN 298
L CA+ G G+ IH Y + L+ + LVDFY KCG +DTA +F+ K
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSF-LATGLVDFYAKCGFIDTAMEIFELCSDKT 314
Query: 299 VVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFA 358
+ +WNAMI+GLA +G GEL V+ + +M++ G+ P+ TF+ VL C+H+GLV++AR LF
Sbjct: 315 LFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD 374
Query: 359 SMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSI----RPNAAIWGSLLSSCRT 414
M L+ + ++HYGCM D+LGR+G + EA ++I M R W LL CR
Sbjct: 375 QMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 415 HGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWM-RENNVKKSPGQ 473
HG++E+AE A + L P + G Y ++ +YA RW++ +R + R+ VKK+ G
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGF 494
Query: 474 SLI 476
S +
Sbjct: 495 SKV 497
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 291 bits (744), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 234/425 (55%), Gaps = 7/425 (1%)
Query: 58 NQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKAC--LGVGD 115
NQ + + + + S I + NG E K F+ + G+ P+ TF LL C G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG--VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMI 173
+G +HG + G +R + +G ++ +Y+ G+ VFD M ++ + N MI
Sbjct: 89 EALGDLLHGYACKLGLDR-NHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 174 HGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEA 233
G+ + G VD +F +M ER ++SW MI+ K G EAL F EM+ + D
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 234 TVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKE 293
++A L C LGA+ G W+H Y S ++ V V N+L+D YC+CG ++ AR VF
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQD-FKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 294 IPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKA 353
+ ++ VVSWN++I G A NG + + +M KG P+ TF G LT C+H GLVE+
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 354 RELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCR 413
F M + I P +EHYGC+VD+ R+G + +A L++SM ++PN + GSLL++C
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 414 THG-HVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPG 472
HG ++ LAE +K L +L + NYV+LSN+YA G+W+ A +R M+ +KK PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 473 QSLIE 477
S IE
Sbjct: 447 FSSIE 451
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 32/316 (10%)
Query: 49 EIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLK 108
++ A K+F++M ++ + +MI + G EE + F ++ G+ PD L
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 109 ACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIV 168
AC +G L G VH ++ F+ + +++LY CG ++ +VF M R V+
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 169 RNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAF 228
N +I GF G+ + L FR+M+E+ F
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEK-------------------------------GF 303
Query: 229 ELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTAR 288
+ D T L C+ +G V+ G + + LVD Y + G L+ A
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 289 NVFKEIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHA 347
+ + +P K N V ++++ + +G + E + + + + +V + A
Sbjct: 364 KLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAAD 423
Query: 348 GLVEKARELFASMTGL 363
G E A ++ M GL
Sbjct: 424 GKWEGASKMRRKMKGL 439
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 257/472 (54%), Gaps = 34/472 (7%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLI--LAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+ N+ L QI A+ ++ + + + L +F + T + + YA +F M P +
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94
Query: 66 LLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGE 125
++FNSM + YS E LF + GI PD YTF LLKAC L G+ +H
Sbjct: 95 VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154
Query: 126 IIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKG 185
++ G + + ++ +YT C +D VFD +
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV----------------------- 191
Query: 186 LYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARL 245
E VV +N MI+ + R +EAL LF EM+ + + +E T+++VL CA L
Sbjct: 192 --------EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 246 GAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAM 305
G++D+G+WIH YA+ + K V V AL+D + KCG LD A ++F+++ K+ +W+AM
Sbjct: 244 GSLDLGKWIHKYAKKHS-FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAM 302
Query: 306 ISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHS 365
I A +G+ E + ++E+M ++ V P++ TF+G+L C+H G VE+ R+ F+ M
Sbjct: 303 IVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFG 362
Query: 366 IVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAV 425
IVP+++HYG MVD+L R+G + +AY+ I + I P +W LL++C +H +++LAE
Sbjct: 363 IVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVS 422
Query: 426 KELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ + L+ + G+YV+LSN+YA +W+ ++LR M++ K PG S IE
Sbjct: 423 ERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIE 474
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 262/501 (52%), Gaps = 36/501 (7%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIK---YATKIFNQMR 61
IL + T + Q HA L+ L + V+ T E K YA I N++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 62 NPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQC 121
+P+ NS+I+AY+ + E + +F + ++PD+Y+F +LKAC G+
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 122 VHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGD 181
+HG I+SG + +V +Y G + KV D M RD + N ++ + +KG
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 182 VDKGLYLFREMRERSVVSWNLMISSLGKSG--------------RD-------------- 213
VD+ LF EM ER+V SWN MIS +G RD
Sbjct: 222 VDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHV 281
Query: 214 ---SEALRLFHEMRDQAFEL-DEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVS 269
+E L +F++M D + E D T+V+VL CA LG++ G+W+H Y + G+ +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF- 340
Query: 270 VGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKG 329
+ ALVD Y KCG +D A VF+ +++V +WN++IS L+ +G G+ +E++ +M+ +G
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG 400
Query: 330 VSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREA 389
PN TF+GVL+ C H G++++AR+LF M+ ++ + P +EHYGCMVD+LGR G + EA
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 390 YDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEG 449
+L+ + + + SLL +C+ G +E AE L+ L +S Y +SN+YA
Sbjct: 461 EELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Query: 450 GRWDDAETLRMWMRENNVKKS 470
GRW+ R MR V +S
Sbjct: 521 GRWEKVIDGRRNMRAERVNRS 541
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 288 bits (737), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 244/462 (52%), Gaps = 33/462 (7%)
Query: 18 LTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMR--NPSVLLFNSMIKAY 75
L +HA +R + + ++S G ++ A +F + + +V+ +NSM KAY
Sbjct: 172 LEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAY 231
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFG 135
S+ G + + L+ L+ PD TF L +C L G+ +H I G
Sbjct: 232 SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG----- 286
Query: 136 SIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRER 195
+ +D+ N I + K D LF M R
Sbjct: 287 --------------------------TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 196 SVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIH 255
+ VSW +MIS + G EAL LFH M + D T+++++ C + G+++ G+WI
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 256 SYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRG 315
+ A+ G R V + NAL+D Y KCG + AR++F P K VV+W MI+G A NG
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 316 ELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGC 375
++L+ +MI PN TF+ VL CAH+G +EK E F M +++I P L+HY C
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC 500
Query: 376 MVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWN 435
MVD+LGR G + EA +LIR+MS +P+A IWG+LL++C+ H +V++AE A + L NLEP
Sbjct: 501 MVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQM 560
Query: 436 SGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+ YV ++NIYA G WD +R M++ N+KK PG+S+I+
Sbjct: 561 AAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQ 602
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 73 KAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFE 132
+A + N P E + LF +K G P+ +TF + KAC + D+ + VH +I+S F
Sbjct: 26 EAVNRNDPVES-LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW 84
Query: 133 RFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREM 192
+ V+++ C +D KVF+ M RD N M+ GFC+ G DK LFREM
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Query: 193 RERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQ 252
R + ++ + +L +S ++L+L M + RLG VD+
Sbjct: 145 RLNEITPDSVTVMTLIQSASFEKSLKLLEAMH---------------AVGIRLG-VDVQ- 187
Query: 253 WIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPR--KNVVSWNAMISGLA 310
V+V N + Y KCG LD+A+ VF+ I R + VVSWN+M +
Sbjct: 188 ---------------VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR 354
G LY M+ + P+ +TF+ + C + + + R
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR 276
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 174/412 (42%), Gaps = 31/412 (7%)
Query: 21 IHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGP 80
+HAH ++ + V + N + YA K+F +M +N+M+ + +G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 81 SEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIG 140
+++ LF ++ I PD T L+++ L++ + +H IR G + ++
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 141 VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSW 200
+ Y CG +D VF+ +D+G +R+VVSW
Sbjct: 194 WISTYGKCGDLDSAKLVFEA---------------------IDRG--------DRTVVSW 224
Query: 201 NLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAES 260
N M + G +A L+ M + F+ D +T + + C + G+ IHS+A
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 261 SGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVE 320
G + + ++ N + Y K +AR +F + + VSW MISG A G + +
Sbjct: 285 LGTDQDIEAI-NTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 321 LYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVL 380
L+ MI G P+ T + +++ C G +E + + A N+ ++D+
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 381 GRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLE 432
+ G + EA D+ + + W ++++ +G A ++I+L+
Sbjct: 404 SKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 454
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
L+R SV +WNL I E+L LF EM+ FE + T V CARL
Sbjct: 8 LYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAD 67
Query: 248 VDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMIS 307
V + +H++ S + V VG A VD + KC +D A VF+ +P ++ +WNAM+S
Sbjct: 68 VGCCEMVHAHLIKSPFWSDVF-VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 308 GLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM 360
G +G + L+ +M ++P+ T V+T A EK+ +L +M
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVT---VMTLIQSASF-EKSLKLLEAM 175
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 177/452 (39%), Gaps = 92/452 (20%)
Query: 14 TRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIK 73
T T IH+H + Q + F+S+ + A +F+ M + + + + MI
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 74 AYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFER 133
Y+ G +E + LF + G PD T L+ C G L G+ + G +R
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR 390
Query: 134 FGSIRI--GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFRE 191
++ I ++++Y+ CG + + +FD + V+ MI G+ G++L
Sbjct: 391 -DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYAL-----NGIFL--- 441
Query: 192 MRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG 251
EAL+LF +M D ++ + T +AVL CA G+++ G
Sbjct: 442 -----------------------EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG 478
Query: 252 -QWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLA 310
++ H + ++V ++ L + C M+ L
Sbjct: 479 WEYFH-------IMKQVYNISPGLDHYSC-------------------------MVDLLG 506
Query: 311 FNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCA---HAGLVEKARELFASMTGLHSIV 367
G+ E +EL M AK P+ + +L C + + E+A E L ++
Sbjct: 507 RKGKLEEALELIRNMSAK---PDAGIWGALLNACKIHRNVKIAEQAAE------SLFNLE 557
Query: 368 PNLEH-YGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWG--SLLS--------SCRTHG 416
P + Y M ++ +G + + + IRS+ + N + S++ + HG
Sbjct: 558 PQMAAPYVEMANIYAAAG-MWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHG 616
Query: 417 HVELAEHAVKELINLEPWNSGNYVLLSNIYAE 448
HVE E L L + +VL ++Y E
Sbjct: 617 HVE-NEVIYFTLNGLSLFAKDKHVLYKDVYKE 647
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 249/463 (53%), Gaps = 52/463 (11%)
Query: 30 LHQSNLILAHF---------------VSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKA 74
+H+ NLI H +++ N + A ++F+QM +V+ + +MI A
Sbjct: 77 VHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISA 136
Query: 75 YSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
YS ++ ++L L+ + P+ YT++ +L++C G+ D+R+ +H II+ G E
Sbjct: 137 YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLES- 192
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
DV VR+ +I F K G+ + L +F EM
Sbjct: 193 ------------------------------DVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ WN +I ++ R AL LF M+ F ++AT+ +VL C L +++G
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
H + Y + + + NALVD YCKCG L+ A VF ++ ++V++W+ MISGLA NG
Sbjct: 283 HVHIVK---YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYG 374
+ ++L+E+M + G PN T VGVL C+HAGL+E F SM L+ I P EHYG
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYG 399
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CM+D+LG++G + +A L+ M P+A W +LL +CR ++ LAE+A K++I L+P
Sbjct: 400 CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE 459
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
++G Y LLSNIYA +WD E +R MR+ +KK PG S IE
Sbjct: 460 DAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 38/304 (12%)
Query: 8 LLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLL 67
+L N + + +H ++ L + + + V L E + A +F++M ++
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 68 FNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEII 127
+NS+I ++ N S+ ++LF +K G ++ T +L+AC G+ L +G H I+
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 128 RSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLY 187
+ +++ + +V++Y CG ++D ++VF++M RDVI + MI G
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGL----------- 334
Query: 188 LFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGA 247
++G EAL+LF M+ + + T+V VL C+ G
Sbjct: 335 --------------------AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 248 VDIGQWIHSYAESSGLY--RKVVSVGNALVDFYCKCGILDTARNVFKEIP-RKNVVSWNA 304
++ G W + + LY V ++D K G LD A + E+ + V+W
Sbjct: 375 LEDG-WYY-FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 305 MISG 308
++
Sbjct: 433 LLGA 436
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 22/221 (9%)
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALV 275
A++ ++ D AT ++ C AV G I + +G +R ++ + N L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNG-HRPMMFLVNVLI 103
Query: 276 DFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKA 335
+ Y K +L+ A +F ++P++NV+SW MIS + + +EL M+ V PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 336 TFVGVLTCC--------AHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVR 387
T+ VL C H G++++ GL S ++ ++DV + G
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGIIKE---------GLES---DVFVRSALIDVFAKLGEPE 211
Query: 388 EAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
+A + M + +A +W S++ + ++A K +
Sbjct: 212 DALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 239/434 (55%), Gaps = 42/434 (9%)
Query: 50 IKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKA 109
I+ A K+F+++ V+ +N+MI Y+ G +E ++LF + + PDE T ++ A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 110 CLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVR 169
C G + +G+ VH I GF I +++LY+ CG+++
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG------------- 322
Query: 170 NLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE 229
LF + + V+SWN +I EAL LF EM
Sbjct: 323 ------------------LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 364
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA------LVDFYCKCGI 283
++ T++++LP CA LGA+DIG+WIH Y + +++ V NA L+D Y KCG
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYID-----KRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 284 LDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTC 343
++ A VF I K++ SWNAMI G A +GR + +L+ +M G+ P+ TFVG+L+
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 344 CAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAA 403
C+H+G+++ R +F +MT + + P LEHYGCM+D+LG SG +EA ++I M + P+
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 404 IWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMR 463
IW SLL +C+ HG+VEL E + LI +EP N G+YVLLSNIYA GRW++ R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 464 ENNVKKSPGQSLIE 477
+ +KK PG S IE
Sbjct: 600 DKGMKKVPGCSSIE 613
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 236/461 (51%), Gaps = 39/461 (8%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVC---GTLNEIKYATKIFNQMRN 62
L LLH T L IHA ++ LH +N L+ + C + YA +F ++
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 63 PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCV 122
P++L++N+M + ++L+ +KL+ + +LG+ P+ YTF +LK+C + GQ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 123 HGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDV 182
HG +++ G + + ++ +Y G+++D KVFD+ HRDV+ +I G+ +G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 183 DKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPIC 242
+ LF E+ + VVSWN MIS ++G EAL LF +M DE+T+V V+ C
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 243 ARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSW 302
A+ G++++G+ +H + + G + + + NAL+D Y KCG L+TA +F+ +P K+V+SW
Sbjct: 277 AQSGSIELGRQVHLWIDDHG-FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335
Query: 303 NAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKAR-------- 354
N +I G + + L+++M+ G +PN T + +L CAH G ++ R
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 355 ----------------ELFA---SMTGLHSIVPNLEH-----YGCMVDVLGRSGCVREAY 390
+++A + H + ++ H + M+ G ++
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 391 DL---IRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKEL 428
DL +R + I+P+ + LLS+C G ++L H + +
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 265/497 (53%), Gaps = 59/497 (11%)
Query: 3 RKILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLIL---AHFVSVCGTLNEIKYATKIFNQ 59
++I L + + L Q+HA LR + L + + + +++ YA ++F+
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 60 MRNPSVLLFNSMIKAYSLN-GPSEEPVKLF-ALLKNLGIWPDEYTFAPLLKACLGVGDLR 117
+ N S ++N++I+A + + EE L+ +L+ PD++TF +LKAC +
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 118 VGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFC 177
G+ VH +I++ GF + G++ LY SC
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC----------------------------- 199
Query: 178 KKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVA 237
G +D +F EM ERS+VSWN MI +L + G AL+LF EM+ ++FE D T+ +
Sbjct: 200 --GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQS 256
Query: 238 VLPICARLGAVDIGQWIHSYAESSGLYRKV-------VSVGNALVDFYCKCGILDTARNV 290
VL CA LG++ +G W H++ L RK V V N+L++ YCKCG L A V
Sbjct: 257 VLSACAGLGSLSLGTWAHAF-----LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 291 FKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAK--GVSPNKATFVGVLTCCAHAG 348
F+ + ++++ SWNAMI G A +GR E + +++M+ K V PN TFVG+L C H G
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 371
Query: 349 LVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSL 408
V K R+ F M + I P LEHYGC+VD++ R+G + EA D++ SM ++P+A IW SL
Sbjct: 372 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 409 LSSCRTHG-HVELAEHAVKELINLEPWN-------SGNYVLLSNIYAEGGRWDDAETLRM 460
L +C G VEL+E + +I + N SG YVLLS +YA RW+D +R
Sbjct: 432 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 491
Query: 461 WMRENNVKKSPGQSLIE 477
M E+ ++K PG S IE
Sbjct: 492 LMSEHGIRKEPGCSSIE 508
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 240/426 (56%), Gaps = 2/426 (0%)
Query: 53 ATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLG 112
A +F+ M V+ +N+M+ Y+ +G E + + + GI +E++FA LL AC+
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 113 VGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
L++ + HG+++ +GF + +++ Y CGQM+ + FDEM+ +D+ + +
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDE 232
I G+ K GD++ LF EM E++ VSW +I+ + G + AL LF +M + ++
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 233 ATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK 292
T + L A + ++ G+ IH Y + + + + ++L+D Y K G L+ + VF+
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI-SSLIDMYSKSGSLEASERVFR 370
Query: 293 EIPRK-NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVE 351
K + V WN MIS LA +G G + + + MI V PN+ T V +L C+H+GLVE
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 352 KARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSS 411
+ F SMT H IVP+ EHY C++D+LGR+GC +E I M P+ IW ++L
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 412 CRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSP 471
CR HG+ EL + A ELI L+P +S Y+LLS+IYA+ G+W+ E LR M++ V K
Sbjct: 491 CRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEK 550
Query: 472 GQSLIE 477
S IE
Sbjct: 551 AVSWIE 556
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 195/443 (44%), Gaps = 42/443 (9%)
Query: 56 IFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGD 115
I N + P + + S + ++ + V L GI A LL+ C
Sbjct: 3 ISNPRKRP-ICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKS 61
Query: 116 LRVGQCVHGEIIRSGFERFGSIRIG-VVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIH 174
L+ G+ +H + +GF+R ++ ++ +Y CG+ D KVFD+M R++ N M+
Sbjct: 62 LKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVS 121
Query: 175 GFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEAT 234
G+ K G + + +F M ER VVSWN M+ + G EAL + E R + +E +
Sbjct: 122 GYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFS 181
Query: 235 VVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFK-- 292
+L C + + + + H +G VV + +++D Y KCG +++A+ F
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV-LSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 293 -----------------------------EIPRKNVVSWNAMISGLAFNGRGELGVELYE 323
E+P KN VSW A+I+G G G ++L+
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 324 QMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRS 383
+MIA GV P + TF L A + +E+ M ++ PN ++D+ +S
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKS 359
Query: 384 GCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELIN--LEPWNSGNYVL 441
G + + + R + + W +++S+ HG A + ++I ++P + V+
Sbjct: 360 GSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVI 419
Query: 442 L-----SNIYAEGGRWDDAETLR 459
L S + EG RW ++ T++
Sbjct: 420 LNACSHSGLVEEGLRWFESMTVQ 442
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 37/324 (11%)
Query: 36 ILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLG 95
I +S L +++ A K+F +M + + + ++I Y G + LF + LG
Sbjct: 247 IWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG 306
Query: 96 IWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGM 155
+ P+++TF+ L A + LR G+ +HG +IR+ + ++++Y+ G ++
Sbjct: 307 VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 156 KVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKSGRDSE 215
+VF C DK V WN MIS+L + G +
Sbjct: 367 RVFR----------------ICD----DK----------HDCVFWNTMISALAQHGLGHK 396
Query: 216 ALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIG-QWIHSYAESSGLYRKVVSVGNAL 274
ALR+ +M + + T+V +L C+ G V+ G +W S G+ L
Sbjct: 397 ALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYA-CL 455
Query: 275 VDFYCKCGILDTARNVFKEIP-RKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
+D + G +E+P + WNA++ +G ELG + +++I K +
Sbjct: 456 IDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELI-KLDPES 514
Query: 334 KATFVGVLTCCAHAG---LVEKAR 354
A ++ + + A G LVEK R
Sbjct: 515 SAPYILLSSIYADHGKWELVEKLR 538
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/104 (17%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLF-NSMIKAY 75
H +IH + +R + + ++++ + + ++ + ++F + +F N+MI A
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 76 SLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVG 119
+ +G + +++ + + P+ T +L AC G + G
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEG 432
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 262/444 (59%), Gaps = 18/444 (4%)
Query: 45 GTLNEIKYATKIFNQMRN----PSVLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDE 100
G L E+ +I ++M + +++ +N ++ ++ +G +E V +F + +LG PD+
Sbjct: 196 GCLEEV---VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 101 YTFAPLLKACLGVGD---LRVGQCVHGEIIRSGFERFGSIRIGVVELYTSCGQMDDGMKV 157
T + +L + VGD L +G+ +HG +I+ G + + ++++Y G + + +
Sbjct: 253 VTVSSVLPS---VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 158 FDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS----VVSWNLMISSLGKSGRD 213
F++ + V N I G + G VDK L +F +E++ VVSW +I+ ++G+D
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNA 273
EAL LF EM+ + + T+ ++LP C + A+ G+ H +A L V VG+A
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-HVGSA 428
Query: 274 LVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPN 333
L+D Y KCG ++ ++ VF +P KN+V WN++++G + +G+ + + ++E ++ + P+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 KATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLI 393
+F +L+ C GL ++ + F M+ + I P LEHY CMV++LGR+G ++EAYDLI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 RSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWD 453
+ M P++ +WG+LL+SCR +V+LAE A ++L +LEP N G YVLLSNIYA G W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DAETLRMWMRENNVKKSPGQSLIE 477
+ +++R M +KK+PG S I+
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 198/437 (45%), Gaps = 42/437 (9%)
Query: 19 TQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLN 78
TQ HA L+ I A ++ N A + + +P++ F+S+I A +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 79 GPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIR 138
+ + +F+ + + G+ PD + L K C + +VG+ +H SG + ++
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 139 IGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMR----E 194
+ +Y CG+M D KVFD MS +DV+ + ++ + +KG +++ + + EM E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
++VSWN ++S +SG EA+ +F ++ F D+ TV +VLP +++G+ I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKC-------------------------------GI 283
H Y GL + + +A++D Y K G+
Sbjct: 275 HGYVIKQGLLKDKCVI-SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 284 LDTARNVFKEIPRK----NVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVG 339
+D A +F+ + NVVSW ++I+G A NG+ +EL+ +M GV PN T
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIR 399
+L C + + R +H ++ N+ ++D+ + G + + ++ +M
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPT 451
Query: 400 PNAAIWGSLLSSCRTHG 416
N W SL++ HG
Sbjct: 452 KNLVCWNSLMNGFSMHG 468
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 101/265 (38%), Gaps = 76/265 (28%)
Query: 5 ILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPS 64
I L HGR+T ++H L +H + ++ + CG +N + +FN M +
Sbjct: 401 IAALGHGRSTHGFAVRVH---LLDNVHVGSALIDMYAK-CGRIN---LSQIVFNMMPTKN 453
Query: 65 VLLFNSMIKAYSLNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
++ +NS++ +S++G ++E + +F L + PD +F LL AC G
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC-------------G 500
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
++ G D+G K F MS
Sbjct: 501 QV----------------------GLTDEGWKYFKMMSEE-------------------- 518
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICAR 244
Y + E ++ M++ LG++G+ EA L EM FE D A+L C
Sbjct: 519 --YGIKPRLEH----YSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLNSCRL 569
Query: 245 LGAVDIGQ-----WIHSYAESSGLY 264
VD+ + H E+ G Y
Sbjct: 570 QNNVDLAEIAAEKLFHLEPENPGTY 594
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 281 bits (720), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/478 (32%), Positives = 262/478 (54%), Gaps = 10/478 (2%)
Query: 6 LRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSV 65
L+L T T +HAH ++ + Q + V+V G +A ++F++M +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 66 LLFNSMIKAYS-LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHG 124
+ + S++ A + N + ++ + G+ PD++ F+ L+KAC +G + G+ VH
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 125 EIIRSGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDK 184
I S + ++ +V++Y CG ++ VFD + ++ I M+ G+ K G ++
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 185 GLYLFREMRERSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFE-LDEATVVAVLPICA 243
L LFR + +++ SW +IS +SG+ EA +F EMR + + LD + +++ CA
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 244 RLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWN 303
L A G+ +H + G + V + NAL+D Y KC + A+++F + ++VVSW
Sbjct: 250 NLAASIAGRQVHGLVIALG-FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 304 AMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGL 363
++I G+A +G+ E + LY+ M++ GV PN+ TFVG++ C+H G VEK RELF SMT
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 364 HSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGH----VE 419
+ I P+L+HY C++D+LGRSG + EA +LI +M P+ W +LLS+C+ G +
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 420 LAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+A+H V +P Y+LLSNIYA W R + E V+K PG S +E
Sbjct: 429 IADHLVSSFKLKDP---STYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVE 483
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 281 bits (720), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 242/458 (52%), Gaps = 35/458 (7%)
Query: 20 QIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYSLNG 79
QIH+ + + + +L F+S+ +IK + +F + R P ++ +N+MI Y+ NG
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNG 301
Query: 80 PSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGSIRI 139
+E + LF L G T L+ G L + +HG ++S F S+
Sbjct: 302 ETELSLSLFKELMLSGARLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVST 358
Query: 140 GVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERSVVS 199
+ +Y+ +++ K+FDE E+S+ S
Sbjct: 359 ALTTVYSKLNEIESARKLFDESP-------------------------------EKSLPS 387
Query: 200 WNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHSYAE 259
WN MIS ++G +A+ LF EM+ F + T+ +L CA+LGA+ +G+W+H
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 260 SSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGELGV 319
S+ + + V AL+ Y KCG + AR +F + +KN V+WN MISG +G+G+ +
Sbjct: 448 STD-FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEAL 506
Query: 320 ELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASMTGLHSIVPNLEHYGCMVDV 379
++ +M+ G++P TF+ VL C+HAGLV++ E+F SM + P+++HY CMVD+
Sbjct: 507 NIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDI 566
Query: 380 LGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNY 439
LGR+G ++ A I +MSI P +++W +LL +CR H LA ++L L+P N G +
Sbjct: 567 LGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYH 626
Query: 440 VLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
VLLSNI++ + A T+R ++ + K+PG +LIE
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 204/489 (41%), Gaps = 75/489 (15%)
Query: 16 THLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAY 75
+HL Q HA + H +L L I YA IF ++ P V LFN +++ +
Sbjct: 34 SHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGF 93
Query: 76 SLNGPSEEPVKLFA-LLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERF 134
S+N + +FA L K+ + P+ T+A + A G D R G+ +HG+ + G +
Sbjct: 94 SVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSE 153
Query: 135 GSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRE 194
+ +V++Y +++D KVFD M +D I+ N MI G+ K + + +FR++
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-- 211
Query: 195 RSVVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWI 254
+ + LD T++ +LP A L + +G I
Sbjct: 212 ----------------------------INESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 255 HSYAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGR 314
HS A +G Y V + Y KCG + +F+E + ++V++NAMI G NG
Sbjct: 244 HSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 315 GELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL------------------------- 349
EL + L+++++ G +T V ++ H L
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTT 362
Query: 350 -------VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMS---IR 399
+E AR+LF S +L + M+ ++G +A L R M
Sbjct: 363 VYSKLNEIESARKLFD-----ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 400 PNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPWNSGNYV--LLSNIYAEGGRWDDAET 457
PN +LS+C G + L + V +L+ + S YV L +YA+ G +A
Sbjct: 418 PNPVTITCILSACAQLGALSLGKW-VHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 458 LRMWMRENN 466
L M + N
Sbjct: 477 LFDLMTKKN 485
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/487 (34%), Positives = 260/487 (53%), Gaps = 52/487 (10%)
Query: 4 KILRLLHGRNTRTHLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNP 63
+ L L+ + +L QIHA + L L+ + + T+ + YA I Q+ NP
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNP 69
Query: 64 SVLLFNSMIKAYSLNGPSEEPVKLFALLKNL------GIWPDEYTFAPLLKAC-LGVGDL 116
SV L+N++I + N S + F+L + + P+E+T+ L KA
Sbjct: 70 SVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH 129
Query: 117 RVGQCVHGEIIR----SGFERFGSIRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLM 172
R G+ +H +++ +RF ++ +V Y +CG++ +
Sbjct: 130 RHGRALHAHVLKFLEPVNHDRF--VQAALVGFYANCGKLREARS---------------- 171
Query: 173 IHGFCKKGDVDKGLYLFREMRERSVVSWNLMISSLGKS---GRDSEALRLFHEMRDQAFE 229
LF +RE + +WN ++++ S D E L LF M+ + E
Sbjct: 172 ---------------LFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNE 216
Query: 230 LDEATVVAVLPICARLGAVDIGQWIHSYAESSGLYRKVVSVGNALVDFYCKCGILDTARN 289
L ++VA++ CA LG G W H Y + L VG +L+D Y KCG L AR
Sbjct: 217 L---SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF-VGTSLIDLYSKCGCLSFARK 272
Query: 290 VFKEIPRKNVVSWNAMISGLAFNGRGELGVELYEQMIAKGVSPNKATFVGVLTCCAHAGL 349
VF E+ +++V +NAMI GLA +G G+ G+ELY+ +I++G+ P+ ATFV ++ C+H+GL
Sbjct: 273 VFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGL 332
Query: 350 VEKARELFASMTGLHSIVPNLEHYGCMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLL 409
V++ ++F SM ++ I P +EHYGC+VD+LGRSG + EA + I+ M ++PNA +W S L
Sbjct: 333 VDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFL 392
Query: 410 SSCRTHGHVELAEHAVKELINLEPWNSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKK 469
S +THG E E A+K L+ LE NSGNYVLLSNIYA RW D E R M+++ V K
Sbjct: 393 GSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNK 452
Query: 470 SPGQSLI 476
SPG S +
Sbjct: 453 SPGISTL 459
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 281 bits (719), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 248/463 (53%), Gaps = 34/463 (7%)
Query: 17 HLTQIHAHFLRHKLHQSNLILAHFVSVCGTLNEIKYATKIFNQMRNPSVLLFNSMIKAYS 76
L +IHA LR + N +L + + ++ YA ++F++M P + L+N++ K Y
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 77 LNGPSEEPVKLFALLKNLGIWPDEYTFAPLLKACLGVGDLRVGQCVHGEIIRSGFERFGS 136
N E + L+ +++LG+ PDE+T+ ++KA +GD G +H +++ GF G
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 137 IRIGVVELYTSCGQMDDGMKVFDEMSHRDVIVRNLMIHGFCKKGDVDKGLYLFREMRERS 196
+ +V +Y K G++ +LF M+ +
Sbjct: 146 VATELVMMYM-------------------------------KFGELSSAEFLFESMQVKD 174
Query: 197 VVSWNLMISSLGKSGRDSEALRLFHEMRDQAFELDEATVVAVLPICARLGAVDIGQWIHS 256
+V+WN ++ ++G + AL F++M A + D TVV++L C +LG+++IG+ I+
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 257 YAESSGLYRKVVSVGNALVDFYCKCGILDTARNVFKEIPRKNVVSWNAMISGLAFNGRGE 316
A + ++ V NA +D + KCG + AR +F+E+ ++NVVSW+ MI G A NG
Sbjct: 235 RARKEEIDCNII-VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSR 293
Query: 317 LGVELYEQMIAKGVSPNKATFVGVLTCCAHAGLVEKARELFASM--TGLHSIVPNLEHYG 374
+ L+ M +G+ PN TF+GVL+ C+HAGLV + + F+ M + ++ P EHY
Sbjct: 294 EALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYA 353
Query: 375 CMVDVLGRSGCVREAYDLIRSMSIRPNAAIWGSLLSSCRTHGHVELAEHAVKELINLEPW 434
CMVD+LGRSG + EAY+ I+ M + P+ IWG+LL +C H + L + L+ P
Sbjct: 354 CMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPD 413
Query: 435 NSGNYVLLSNIYAEGGRWDDAETLRMWMRENNVKKSPGQSLIE 477
+VLLSNIYA G+WD + +R MR+ KK S +E
Sbjct: 414 IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,419,120
Number of Sequences: 539616
Number of extensions: 7509040
Number of successful extensions: 24020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 16371
Number of HSP's gapped (non-prelim): 2153
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)