Query 042504
Match_columns 286
No_of_seqs 245 out of 1394
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 11:38:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042504.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042504hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 6.6E-66 2.3E-70 473.7 22.5 256 25-286 5-276 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 3.9E-60 1.3E-64 428.5 17.9 229 53-286 4-236 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 3E-59 1E-63 423.3 14.2 217 54-286 2-222 (319)
4 1odm_A Isopenicillin N synthas 100.0 3.7E-57 1.3E-61 412.0 15.7 222 53-286 6-258 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 6.1E-56 2.1E-60 400.6 14.8 209 54-286 3-231 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 7.7E-55 2.6E-59 387.8 16.8 206 54-286 2-219 (280)
7 3dkq_A PKHD-type hydroxylase S 88.2 1.9 6.3E-05 36.6 8.1 83 195-283 74-173 (243)
8 3itq_A Prolyl 4-hydroxylase, a 79.7 3.4 0.00012 34.3 6.0 72 195-281 94-179 (216)
9 2jig_A Prolyl-4 hydroxylase; h 74.9 4.8 0.00016 33.3 5.6 54 221-280 99-183 (224)
10 2da7_A Zinc finger homeobox pr 62.9 4.4 0.00015 27.4 2.2 41 176-216 14-54 (71)
11 1m5a_B Insulin B chain; alpha 56.4 12 0.00041 20.7 2.9 18 74-91 10-27 (30)
12 2dbn_A Hypothetical protein YB 46.9 6.6 0.00023 36.3 1.4 54 53-113 98-151 (461)
13 3o2g_A Gamma-butyrobetaine dio 45.8 7.1 0.00024 35.3 1.4 52 55-114 122-173 (388)
14 4ay7_A Methylcobalamin\: coenz 43.9 35 0.0012 29.9 5.7 47 64-113 298-348 (348)
15 2opi_A L-fuculose-1-phosphate 43.3 14 0.00049 30.1 2.9 36 55-96 125-160 (212)
16 1otf_A 4-oxalocrotonate tautom 38.9 21 0.0007 22.3 2.5 29 57-85 1-29 (62)
17 1zav_A 50S ribosomal protein L 38.8 72 0.0025 25.2 6.3 41 70-110 6-47 (180)
18 2j01_J 50S ribosomal protein L 38.1 72 0.0025 25.0 6.2 40 70-109 4-45 (173)
19 2opa_A Probable tautomerase YW 37.8 22 0.00075 22.1 2.5 29 57-85 1-29 (61)
20 1e4c_P L-fuculose 1-phosphate 37.6 19 0.00066 29.4 2.8 36 55-96 122-157 (215)
21 2hbt_A EGL nine homolog 1; pro 37.1 54 0.0018 27.4 5.5 35 76-111 16-50 (247)
22 3jsy_A Acidic ribosomal protei 36.7 55 0.0019 26.8 5.4 41 70-110 3-44 (213)
23 2ww6_A Fibritin, T4 fibritin; 35.4 32 0.0011 18.3 2.4 14 258-271 11-24 (27)
24 1pvt_A Sugar-phosphate aldolas 34.9 26 0.0009 29.0 3.2 36 55-96 161-196 (238)
25 3m20_A 4-oxalocrotonate tautom 34.2 40 0.0014 21.3 3.4 28 57-85 1-28 (62)
26 2fk5_A Fuculose-1-phosphate al 33.1 24 0.00083 28.5 2.6 36 55-96 117-153 (200)
27 1otj_A Alpha-ketoglutarate-dep 32.9 24 0.00081 29.9 2.7 51 54-113 16-66 (283)
28 2iuw_A Alkylated repair protei 32.4 1.3E+02 0.0044 24.9 7.1 58 221-284 127-203 (238)
29 2x4k_A 4-oxalocrotonate tautom 31.6 31 0.0011 21.3 2.5 31 56-86 3-33 (63)
30 1oih_A Putative alkylsulfatase 31.2 51 0.0017 28.1 4.6 52 54-114 26-78 (301)
31 3ry0_A Putative tautomerase; o 30.5 34 0.0011 21.8 2.5 29 57-85 1-29 (65)
32 2do1_A Nuclear protein HCC-1; 29.4 52 0.0018 20.8 3.2 31 76-109 15-45 (55)
33 1gyx_A YDCE, B1461, hypothetic 28.5 46 0.0016 22.0 3.0 30 57-86 1-31 (76)
34 2v9l_A Rhamnulose-1-phosphate 28.1 27 0.00094 29.7 2.2 36 55-96 179-214 (274)
35 3m21_A Probable tautomerase HP 27.4 46 0.0016 21.3 2.8 29 57-85 1-32 (67)
36 3abf_A 4-oxalocrotonate tautom 27.2 71 0.0024 19.8 3.7 21 190-210 18-38 (64)
37 3pvj_A Alpha-ketoglutarate-dep 27.1 57 0.0019 27.6 4.1 52 54-114 14-65 (277)
38 3tht_A Alkylated DNA repair pr 26.9 81 0.0028 27.8 5.1 58 220-284 198-262 (345)
39 3s57_A Alpha-ketoglutarate-dep 26.7 1.2E+02 0.0043 24.3 5.9 58 221-284 101-176 (204)
40 3mb2_A 4-oxalocrotonate tautom 26.1 41 0.0014 21.9 2.4 29 57-85 2-30 (72)
41 3i3q_A Alpha-ketoglutarate-dep 25.7 93 0.0032 25.3 5.0 57 221-284 106-172 (211)
42 2irp_A Putative aldolase class 24.7 20 0.00067 29.1 0.6 36 54-96 138-176 (208)
43 2rg4_A Uncharacterized protein 24.7 2.7E+02 0.0094 22.4 10.8 19 265-283 166-184 (216)
44 3ghf_A Septum site-determining 23.6 71 0.0024 23.5 3.5 44 58-107 51-95 (120)
45 2z7b_A MLR6791 protein; class 23.3 58 0.002 27.6 3.4 38 55-96 157-201 (270)
46 3u5i_q A0, L10E, 60S acidic ri 23.1 1.3E+02 0.0046 26.0 5.7 41 70-110 6-47 (312)
47 3r1j_A Alpha-ketoglutarate-dep 23.1 80 0.0027 27.1 4.3 52 54-114 20-72 (301)
48 3ocr_A Class II aldolase/adduc 22.0 38 0.0013 28.9 1.9 37 55-96 156-192 (273)
49 3ej9_A Alpha-subunit of trans- 21.8 59 0.002 21.6 2.5 29 57-85 2-30 (76)
50 2p17_A Pirin-like protein; GK1 20.9 55 0.0019 27.9 2.7 22 232-253 47-68 (277)
51 4f3y_A DHPR, dihydrodipicolina 20.4 69 0.0024 27.2 3.3 17 191-207 170-186 (272)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=6.6e-66 Score=473.67 Aligned_cols=256 Identities=25% Similarity=0.436 Sum_probs=228.9
Q ss_pred eeehhhhhccCCCCCCCccCCCCcc-C-cC---------CCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEe
Q 042504 25 IVFDYHKLQKQANLPTEFIWPNLEL-A-QE---------ELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVIN 93 (286)
Q Consensus 25 ~~~~~~~~~~~~~iP~~~i~p~~~~-~-~~---------~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~n 93 (286)
..|++|+++|+.+||.+|++|.+++ . .. ..+||||||+.|.++++++|++++++|++||++||||||+|
T Consensus 5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n 84 (356)
T 1gp6_A 5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN 84 (356)
T ss_dssp CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 3479999999999999999998776 2 21 23699999999988888889999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCCC--CCCCccCCCCCccccCCCccccccccccCCCCccchhccccccC
Q 042504 94 HGVDASLLKAAIEETDSIFKLPLERKLSIPIKTG--LAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVF 171 (286)
Q Consensus 94 hGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~--~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~ 171 (286)
|||+.++++++++.+++||+||.|+|+++..... .++||+........+..||+|+|+++..|.. ....+.||..
T Consensus 85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~-~~~~~~wP~~-- 161 (356)
T 1gp6_A 85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE-KRDLSIWPKT-- 161 (356)
T ss_dssp CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGG-GCCGGGSCCS--
T ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCcc-ccccccCCCc--
Confidence 9999999999999999999999999999987543 5899988765555677899999999865543 2345678864
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc---CCcceeEEeecCCCCCCCCCccccccccCCce
Q 042504 172 GQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFE---DGYSIVRFNFYPPCKNSALTLGTGPHYDPNSL 248 (286)
Q Consensus 172 ~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~l 248 (286)
.++||+++++|+++|++|+.+||++|+++||+++++|.+.+. .+.+.||+||||||++++.++|+++|||+|+|
T Consensus 162 ---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~l 238 (356)
T 1gp6_A 162 ---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL 238 (356)
T ss_dssp ---STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred ---chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeE
Confidence 378999999999999999999999999999999999999987 57789999999999999889999999999999
Q ss_pred EEEecCCCCceEEEeCCeEEEeccCCCcEEEecCCCCC
Q 042504 249 TILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV 286 (286)
Q Consensus 249 TlL~qd~v~GLqV~~~g~W~~V~p~pg~~vVNiGD~lq 286 (286)
|||+||+++||||+++|+|++|+|+||+|||||||+||
T Consensus 239 TlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 239 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp EEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred EEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence 99999999999999999999999999999999999985
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=3.9e-60 Score=428.46 Aligned_cols=229 Identities=22% Similarity=0.346 Sum_probs=194.5
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCCCCCCCc
Q 042504 53 ELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGY 132 (286)
Q Consensus 53 ~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~GY 132 (286)
..+||||||+.+.+ .+++++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||
T Consensus 4 ~~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy 79 (312)
T 3oox_A 4 TSAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGY 79 (312)
T ss_dssp CCSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEE
T ss_pred CCCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccc
Confidence 45799999998743 46788999999999999999999999999999999999999999999999998754458999
Q ss_pred cCCCCCcc--ccCCCcccccccccc-CCCCccchhccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChh
Q 042504 133 AGAHAGRF--TTNLPWKETFTFNYH-EKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRK 209 (286)
Q Consensus 133 ~~~~~~~~--~~~~d~~E~~~~~~~-p~~~~~~~~~wp~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 209 (286)
.+.+.+.. ....||+|.|+++.. +.. ......++.+.||+..++||+++++|+++|.+|+.+||++|+++||++++
T Consensus 80 ~~~g~e~~~~~~~~D~kE~~~~~~~~~~~-~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 158 (312)
T 3oox_A 80 IPFGVETAKGADHYDLKEFWHMGRDLPPG-HRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD 158 (312)
T ss_dssp ECCCCCCSTTSCSCCCCEEEEECCCCCTT-CGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred ccccceecCCCCCCCceeeeEeecCCCcC-CcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence 77655432 356899999998753 221 11111223334444458999999999999999999999999999999999
Q ss_pred HHHHhhcCCcceeEEeecCCCCCCCCCccccccccCCceEEEecCCCCceEEE-eCCeEEEeccCCCcEEEecCCCCC
Q 042504 210 HYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVF-SNNKWQTIRPRSDALVINIGDTFV 286 (286)
Q Consensus 210 ~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd~v~GLqV~-~~g~W~~V~p~pg~~vVNiGD~lq 286 (286)
+|.+.+..+.+.||+||||||+.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||
T Consensus 159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 99999988889999999999998655699999999999999999999999997 789999999999999999999985
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3e-59 Score=423.29 Aligned_cols=217 Identities=24% Similarity=0.485 Sum_probs=192.6
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCCCCCCCcc
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYA 133 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~GY~ 133 (286)
.+||||||+.+.. .++++++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l~~---~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKVNG---VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALE 75 (319)
T ss_dssp CCCCEEEGGGGGS---TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHT
T ss_pred CCCCEEECcccCc---ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCC
Confidence 4699999998852 34678899999999999999999999999999999999999999999999998643 24787
Q ss_pred CCCCCccccCCCccccccccccCCCCccchhccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHH
Q 042504 134 GAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKK 213 (286)
Q Consensus 134 ~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 213 (286)
+...+ .+..||+|+|.++..|.. ..+.||.. .++||+++++|+++|.+|+.+||++|+++||+++++|.+
T Consensus 76 ~~~~e--~~~~d~ke~~~~~~~p~~---~~~~wP~~-----~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 145 (319)
T 1w9y_A 76 GVQAE--VTDMDWESTFFLKHLPIS---NISEVPDL-----DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKN 145 (319)
T ss_dssp TCCCC--GGGCCCCEEEEEEEESCC---GGGGCTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred ccccc--CCCCChhhheeeecCCcc---cccccccc-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 65333 467899999999865533 35678864 389999999999999999999999999999999999999
Q ss_pred hhcC---CcceeEEeecCCCCCCCCCccccccccCCceEEEecC-CCCceEEEeCCeEEEeccCCCcEEEecCCCCC
Q 042504 214 FFED---GYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQE-QVEGLEVFSNNKWQTIRPRSDALVINIGDTFV 286 (286)
Q Consensus 214 ~~~~---~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd-~v~GLqV~~~g~W~~V~p~pg~~vVNiGD~lq 286 (286)
.+.. ..+.||+||||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||++||||||+||
T Consensus 146 ~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~ 222 (319)
T 1w9y_A 146 AFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLE 222 (319)
T ss_dssp HHHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred HhcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHH
Confidence 8863 5678999999999999889999999999999999995 79999999999999999999999999999986
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.7e-57 Score=412.04 Aligned_cols=222 Identities=20% Similarity=0.303 Sum_probs=194.0
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhh-cCCCHHHHhcCCcCCCCCCC
Q 042504 53 ELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSI-FKLPLERKLSIPIKTGLAKG 131 (286)
Q Consensus 53 ~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~F-F~lp~eeK~~~~~~~~~~~G 131 (286)
..+||||||+.|.++++++|++++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.+ +|
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~G 77 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RA 77 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TT
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cC
Confidence 45799999999988888889999999999999999999999999 999999999999 9999999999865 68
Q ss_pred ccCCCCCcc--c------cCCCccccccccccCC-CCc--------cchhccccccCCcchhHHHHHHHHHHHHHHHHHH
Q 042504 132 YAGAHAGRF--T------TNLPWKETFTFNYHEK-DAE--------PLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSG 194 (286)
Q Consensus 132 Y~~~~~~~~--~------~~~d~~E~~~~~~~p~-~~~--------~~~~~wp~~~~~~~~~~fr~~~~~y~~~~~~l~~ 194 (286)
|.+.+.+.. . +..||+|+|+++.... ... ...+.||... ..++||+++++|+++|.+|+.
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~---~~p~fr~~~~~y~~~~~~l~~ 154 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDET---KHPGFQDFAEQYYWDVFGLSS 154 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTT---TSTTHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCC---CChHHHHHHHHHHHHHHHHHH
Confidence 876554321 1 4679999999985421 100 1245676531 158899999999999999999
Q ss_pred HHHHHHHHHcCCChhHHHHhhcCCcceeE--EeecC------C---CCCCCC-CccccccccCCceEEEecCCCCceEEE
Q 042504 195 VLFELLAMSLGVDRKHYKKFFEDGYSIVR--FNFYP------P---CKNSAL-TLGTGPHYDPNSLTILHQEQVEGLEVF 262 (286)
Q Consensus 195 ~ll~~la~~Lgl~~~~~~~~~~~~~~~lr--~~~YP------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~v~GLqV~ 262 (286)
+||++|+++||+++++|.+.+..+.+.|| +|||| | |++++. .+|+++|||+|+||||+||+++||||+
T Consensus 155 ~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~ 234 (331)
T 1odm_A 155 ALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVE 234 (331)
T ss_dssp HHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEE
T ss_pred HHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEE
Confidence 99999999999999999999988889999 99999 8 888876 899999999999999999999999999
Q ss_pred -eCCeEEEeccCCCcEEEecCCCCC
Q 042504 263 -SNNKWQTIRPRSDALVINIGDTFV 286 (286)
Q Consensus 263 -~~g~W~~V~p~pg~~vVNiGD~lq 286 (286)
++| |++|+|+||++||||||+||
T Consensus 235 ~~~g-Wi~V~p~pgalvVNiGD~l~ 258 (331)
T 1odm_A 235 TAAG-YQDIEADDTGYLINCGSYMA 258 (331)
T ss_dssp ETTE-EEECCCCTTSEEEEECHHHH
T ss_pred cCCC-eEECCCCCCeEEEEccHHHH
Confidence 688 99999999999999999985
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.1e-56 Score=400.60 Aligned_cols=209 Identities=17% Similarity=0.284 Sum_probs=173.3
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCCC-HHHHhcCCcCC-CCCCC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLP-LERKLSIPIKT-GLAKG 131 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~lp-~eeK~~~~~~~-~~~~G 131 (286)
.+||||||+.+.+++.. ++|++||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ...+|
T Consensus 3 ~~iPvIDls~l~~~~~~------~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ------DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCSH------HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCHH------HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 57999999988655432 289999999999999999999999999999999999999 99999998754 45799
Q ss_pred ccCCCCCcc------ccCCCccccccccccCCCCccchhccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 042504 132 YAGAHAGRF------TTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLG 205 (286)
Q Consensus 132 Y~~~~~~~~------~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 205 (286)
|.+.+.+.. .+..||+|+|+++.. .+.|| .++||+++++|+++|.+|+.+||++|+++||
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~-------~n~wP-------~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 142 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA-------DNLFP-------SGDFERIWTQYFDRQYTASRAVAREVLRATG 142 (311)
T ss_dssp EEEC-----------------CEEEEECSS-------SCCCS-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC-------CCCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 987765432 467899999999743 34687 2899999999999999999999999999999
Q ss_pred C----ChhHHHHhhcCCcceeEEeecCCCCCCC--C--CccccccccCCceEEEecC-CCCc---eEEEeCCeEEEeccC
Q 042504 206 V----DRKHYKKFFEDGYSIVRFNFYPPCKNSA--L--TLGTGPHYDPNSLTILHQE-QVEG---LEVFSNNKWQTIRPR 273 (286)
Q Consensus 206 l----~~~~~~~~~~~~~~~lr~~~YP~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~v~G---LqV~~~g~W~~V~p~ 273 (286)
+ ++++|.+. .+.||+||||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+
T Consensus 143 l~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~ 218 (311)
T 1dcs_A 143 TEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYR 218 (311)
T ss_dssp CCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCC
T ss_pred CCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCC
Confidence 9 88888765 6789999999999874 3 7889999999999999998 8999 999999999999999
Q ss_pred CCcEEEecCCCCC
Q 042504 274 SDALVINIGDTFV 286 (286)
Q Consensus 274 pg~~vVNiGD~lq 286 (286)
||++||||||+||
T Consensus 219 pg~lvVNiGD~l~ 231 (311)
T 1dcs_A 219 PDAVLVFCGAIAT 231 (311)
T ss_dssp TTCEEEEECHHHH
T ss_pred CCeEEEEHHHHHH
Confidence 9999999999985
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.7e-55 Score=387.84 Aligned_cols=206 Identities=20% Similarity=0.272 Sum_probs=173.7
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCCCCCCCcc
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYA 133 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~GY~ 133 (286)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||+| |+|+++.+.++..+||.
T Consensus 2 ~~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~ 70 (280)
T 3on7_A 2 MKLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFF 70 (280)
T ss_dssp --CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEE
T ss_pred CCCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccc
Confidence 47999999963 23678999999999999999999999999999999999998 89999987666689998
Q ss_pred CCC-CCcc--ccCCCccccccccccCCCCccchhccccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--
Q 042504 134 GAH-AGRF--TTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDR-- 208 (286)
Q Consensus 134 ~~~-~~~~--~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~-- 208 (286)
+.. .+.. ....||+|.|.+. .||.. .++||+++++|+++|.+|+.+||++||++||++.
T Consensus 71 ~~~~~e~~~~~~~~D~kE~~~~~-----------p~~~~-----p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 134 (280)
T 3on7_A 71 PASISETAKGHTVKDIKEYYHVY-----------PWGRI-----PDSLRANILAYYEKANTLASELLEWIETYSPDEIKA 134 (280)
T ss_dssp CCC--------CCCCSCEEEEEC-----------TTSCC-----CGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHT
T ss_pred cCccccccCCCCcccHHHHHhcC-----------CCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 765 3322 2467999998763 14432 2689999999999999999999999999999863
Q ss_pred hH---HHHhhcCCc-ceeEEeecCCCCCCC--CCccccccccCCceEEEecCCCCceEEE-eCCeEEEeccCCCcEEEec
Q 042504 209 KH---YKKFFEDGY-SIVRFNFYPPCKNSA--LTLGTGPHYDPNSLTILHQEQVEGLEVF-SNNKWQTIRPRSDALVINI 281 (286)
Q Consensus 209 ~~---~~~~~~~~~-~~lr~~~YP~~~~~~--~~~g~~~HtD~~~lTlL~qd~v~GLqV~-~~g~W~~V~p~pg~~vVNi 281 (286)
++ |.+++.++. +.||++|||||+.++ .++|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||
T Consensus 135 ~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNi 214 (280)
T 3on7_A 135 KFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINI 214 (280)
T ss_dssp TCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEE
T ss_pred hhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEc
Confidence 32 666666554 899999999999765 5799999999999999999999999998 6899999999999999999
Q ss_pred CCCCC
Q 042504 282 GDTFV 286 (286)
Q Consensus 282 GD~lq 286 (286)
||+||
T Consensus 215 GD~l~ 219 (280)
T 3on7_A 215 GDMLQ 219 (280)
T ss_dssp CHHHH
T ss_pred ChHHH
Confidence 99985
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=88.15 E-value=1.9 Score=36.63 Aligned_cols=83 Identities=19% Similarity=0.109 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCChhHHHHhhcCCcceeEEeecCCCCCCCCCccccccccCC-----------ceEEEec--C----CCC
Q 042504 195 VLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPN-----------SLTILHQ--E----QVE 257 (286)
Q Consensus 195 ~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~v~ 257 (286)
.|.+.|...|+....++.........-+++++|.+-. -..+|.|.. .+|+++. | +-|
T Consensus 74 ~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GG 147 (243)
T 3dkq_A 74 ALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGG 147 (243)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEEC
T ss_pred HHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCc
Confidence 3344444455554433322222233458899997732 256777763 4666665 3 124
Q ss_pred ceEEEeCCeEEEeccCCCcEEEecCC
Q 042504 258 GLEVFSNNKWQTIRPRSDALVINIGD 283 (286)
Q Consensus 258 GLqV~~~g~W~~V~p~pg~~vVNiGD 283 (286)
.|.+.....=..|+|..|.+|+.-.+
T Consensus 148 etvf~~~~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 148 ELVIQDTYGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp CEEEEETTEEEEECCCTTCEEEEETT
T ss_pred eEEEeeCCCcEEEecCCCEEEEECCC
Confidence 45554444447899999999986554
No 8
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=79.66 E-value=3.4 Score=34.27 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCChhHHHHhhcCCcceeEEeecCCCCCCCCCccccccccCC-----------ceEEEec--C-CCCceE
Q 042504 195 VLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPN-----------SLTILHQ--E-QVEGLE 260 (286)
Q Consensus 195 ~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d-~v~GLq 260 (286)
+|.+.++..+|++.. ..-.+++.+|.+... ..+|.|+. .+|+|+. | ..||==
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 444455556777632 122488888876322 56777763 4788875 2 234433
Q ss_pred EEeCCeEEEeccCCCcEEEec
Q 042504 261 VFSNNKWQTIRPRSDALVINI 281 (286)
Q Consensus 261 V~~~g~W~~V~p~pg~~vVNi 281 (286)
++.+. =+.|.|..|..|+--
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~ 179 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFE 179 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEE
T ss_pred EecCC-CCEEecCCCeEEEEe
Confidence 44332 278999999988753
No 9
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=74.85 E-value=4.8 Score=33.26 Aligned_cols=54 Identities=20% Similarity=0.298 Sum_probs=33.8
Q ss_pred eeEEeecCCCCCCCCCccccccccC--------------CceEEEec--C-CCCceEEEeCC--------------eEEE
Q 042504 221 IVRFNFYPPCKNSALTLGTGPHYDP--------------NSLTILHQ--E-QVEGLEVFSNN--------------KWQT 269 (286)
Q Consensus 221 ~lr~~~YP~~~~~~~~~g~~~HtD~--------------~~lTlL~q--d-~v~GLqV~~~g--------------~W~~ 269 (286)
-+++++|.+-. ...+|.|+ ..+|+|+. | ..||==+.... .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47888887632 25667774 24788865 2 23443333221 1489
Q ss_pred eccCCCcEEEe
Q 042504 270 IRPRSDALVIN 280 (286)
Q Consensus 270 V~p~pg~~vVN 280 (286)
|.|..|.+|+-
T Consensus 173 V~P~~G~al~f 183 (224)
T 2jig_A 173 VKPIKGDALMF 183 (224)
T ss_dssp ECCCTTCEEEE
T ss_pred EecccCcEEEE
Confidence 99999998885
No 10
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.94 E-value=4.4 Score=27.36 Aligned_cols=41 Identities=12% Similarity=0.267 Sum_probs=35.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc
Q 042504 176 ERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFE 216 (286)
Q Consensus 176 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 216 (286)
.+-+.+++.|+..-.+-...-+..||..+||+.+.++..|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 45678999999988888888899999999999998887774
No 11
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=56.35 E-value=12 Score=20.70 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=15.7
Q ss_pred HHHHHHHHHhhhccEEEE
Q 042504 74 EAIDLVRGACVNHGFFQV 91 (286)
Q Consensus 74 ~~~~~l~~A~~~~GfF~v 91 (286)
++++.|.-.|.+-|||+-
T Consensus 10 ~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHhccCccccC
Confidence 678889999999999983
No 12
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=46.91 E-value=6.6 Score=36.28 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=39.4
Q ss_pred CCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcC
Q 042504 53 ELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFK 113 (286)
Q Consensus 53 ~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~ 113 (286)
..-||.||++++.++. +.++.++..++.|++.|.|. ||.+...+..+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3469999999765432 12345677899999988775 788888877777777763
No 13
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=45.79 E-value=7.1 Score=35.26 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=38.6
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKL 114 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~l 114 (286)
++|.||++.+... ++..+++.+|+.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~-----d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY-----DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC-----HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC-----HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 7899999876532 245678999999999999999888754 344556666544
No 14
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=43.86 E-value=35 Score=29.95 Aligned_cols=47 Identities=15% Similarity=0.119 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCC----HHHHHHHHHHHHhhcC
Q 042504 64 FLSGDERATAEAIDLVRGACVNHGFFQVINHGVD----ASLLKAAIEETDSIFK 113 (286)
Q Consensus 64 l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~----~~l~~~~~~~~~~FF~ 113 (286)
|..++++ ++.+++++.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 298 l~~g~~e---~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVD---KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHH---HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHH---HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4456654 444556666677788766789975 6889999999999985
No 15
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=43.28 E-value=14 Score=30.09 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=27.7
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++++... +++ ++++.+.+++.+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP--GSP----ELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998754 333 45677888888888899999996
No 16
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=38.86 E-value=21 Score=22.33 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=17.8
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|+|.+.-+...+++.+++++++|.+++.+
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~ 29 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMAN 29 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433334667777777777777665
No 17
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=38.78 E-value=72 Score=25.19 Aligned_cols=41 Identities=5% Similarity=0.028 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHhhhccEEEEEeC-CCCHHHHHHHHHHHHh
Q 042504 70 RATAEAIDLVRGACVNHGFFQVINH-GVDASLLKAAIEETDS 110 (286)
Q Consensus 70 ~~~~~~~~~l~~A~~~~GfF~v~nh-Gi~~~l~~~~~~~~~~ 110 (286)
+.+.+++++|.+.+++...++|+++ |++...+.++....++
T Consensus 6 ~~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 6 QQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 4567788889999999988888865 8988777777766653
No 18
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=38.07 E-value=72 Score=25.02 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhhhcc-EEEEEe-CCCCHHHHHHHHHHHH
Q 042504 70 RATAEAIDLVRGACVNHG-FFQVIN-HGVDASLLKAAIEETD 109 (286)
Q Consensus 70 ~~~~~~~~~l~~A~~~~G-fF~v~n-hGi~~~l~~~~~~~~~ 109 (286)
+.+.+++++|.+.+++.. .++|++ +|++...+.++....+
T Consensus 4 ~~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 4 KRNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 356778888999998888 666665 4888877777776655
No 19
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=37.81 E-value=22 Score=22.14 Aligned_cols=29 Identities=10% Similarity=0.209 Sum_probs=18.3
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|.|.+.-+...+++.+++++++|.+++.+
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~ 29 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKE 29 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 45555433334667777777777777665
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=37.64 E-value=19 Score=29.37 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=27.7
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++++... +++ ++++.+.+++.+.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~--g~~----~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTR----ELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCH----HHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6899988754 233 55677888888888889999996
No 21
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=37.10 E-value=54 Score=27.40 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=28.4
Q ss_pred HHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhh
Q 042504 76 IDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSI 111 (286)
Q Consensus 76 ~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~F 111 (286)
.+.|..++.+.|++++.| -++++.++.+.+.++.+
T Consensus 16 ~~~i~~~L~~~g~~Vid~-fLs~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDD-FLGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHTHHHHHHHTSEEEESS-SSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCEEEECC-CCCHHHHHHHHHHHHhh
Confidence 456889999999887554 58999999999888774
No 22
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=36.70 E-value=55 Score=26.77 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhhhccEEEEEe-CCCCHHHHHHHHHHHHh
Q 042504 70 RATAEAIDLVRGACVNHGFFQVIN-HGVDASLLKAAIEETDS 110 (286)
Q Consensus 70 ~~~~~~~~~l~~A~~~~GfF~v~n-hGi~~~l~~~~~~~~~~ 110 (286)
+.+.++.++|.+.+.++..++|++ +|++...++++....|+
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456677888888888887777776 58888777777776653
No 23
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=35.35 E-value=32 Score=18.29 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=10.6
Q ss_pred ceEEEeCCeEEEec
Q 042504 258 GLEVFSNNKWQTIR 271 (286)
Q Consensus 258 GLqV~~~g~W~~V~ 271 (286)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 34678999999754
No 24
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=34.94 E-value=26 Score=29.05 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=27.5
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++++... +++ ++++.+.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GSV----ELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TCH----HHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC--CcH----HHHHHHHHHhccCCEEEEcCCCc
Confidence 6999998653 343 45667788888888889999996
No 25
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=34.19 E-value=40 Score=21.26 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=18.6
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|+|.+.- ...+++.+++++++|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555554 345677788888888777665
No 26
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=33.06 E-value=24 Score=28.49 Aligned_cols=36 Identities=25% Similarity=0.181 Sum_probs=26.2
Q ss_pred CCcee-eCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLI-DLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvI-Dl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++ ++... +++ ++++.+.+++.+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATE----EAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS--SSH----HHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC--CcH----HHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77653 333 45666777777778888999985
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=32.85 E-value=24 Score=29.91 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=36.1
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFK 113 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~ 113 (286)
++|+-|||+...+ . +..++|++++.++|+..+.+-.++.+. ..+.++.|=.
T Consensus 16 aei~gvdl~~~l~--~----~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G~ 66 (283)
T 1otj_A 16 AQISGADLTRPLS--D----NQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFGE 66 (283)
T ss_dssp EEEESCCSSSCCC--H----HHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTSC
T ss_pred EEEECCCcCccCC--H----HHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 3677789988542 2 236679999999999999998877643 3445555543
No 28
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=32.36 E-value=1.3e+02 Score=24.86 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=35.7
Q ss_pred eeEEeecCCCCCCCCCccccccccCC--------ceEEEecCCCCceEEEe-C----------CeEEEeccCCCcEEEec
Q 042504 221 IVRFNFYPPCKNSALTLGTGPHYDPN--------SLTILHQEQVEGLEVFS-N----------NKWQTIRPRSDALVINI 281 (286)
Q Consensus 221 ~lr~~~YP~~~~~~~~~g~~~HtD~~--------~lTlL~qd~v~GLqV~~-~----------g~W~~V~p~pg~~vVNi 281 (286)
.+-+|+|++-. -++++|.|-. +.||=+-. ..=+.+.. . +..+.|.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~-~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA-TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES-CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC-CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 46799998632 2688888852 23332321 12233322 1 36888999999999988
Q ss_pred CCC
Q 042504 282 GDT 284 (286)
Q Consensus 282 GD~ 284 (286)
|++
T Consensus 201 G~~ 203 (238)
T 2iuw_A 201 GAT 203 (238)
T ss_dssp ETH
T ss_pred hhh
Confidence 863
No 29
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=31.64 E-value=31 Score=21.30 Aligned_cols=31 Identities=10% Similarity=0.183 Sum_probs=20.3
Q ss_pred CceeeCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 042504 56 EPLIDLHGFLSGDERATAEAIDLVRGACVNH 86 (286)
Q Consensus 56 iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~ 86 (286)
.|.|.+.-+...+++.+++++++|.+++.+.
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 4666665444446667777787777776653
No 30
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=31.18 E-value=51 Score=28.09 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=37.2
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCC-CCHHHHHHHHHHHHhhcCC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHG-VDASLLKAAIEETDSIFKL 114 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhG-i~~~l~~~~~~~~~~FF~l 114 (286)
++|+-|||+...+ . +..++|++++.++|+..+.+-. ++. +...+.++.|-.+
T Consensus 26 aei~gvdl~~~l~--~----~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 26 AEIRGVKLSPDLD--A----ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEEESCCCCTTCC--H----HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred eEEeCCCccccCC--H----HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 4577789987542 2 2356799999999999999987 875 4555566666543
No 31
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=30.46 E-value=34 Score=21.80 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=18.5
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|+|.+.-+...+++.++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433344677778888888877765
No 32
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=29.43 E-value=52 Score=20.80 Aligned_cols=31 Identities=13% Similarity=0.394 Sum_probs=23.8
Q ss_pred HHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHH
Q 042504 76 IDLVRGACVNHGFFQVINHGVDASLLKAAIEETD 109 (286)
Q Consensus 76 ~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~ 109 (286)
+.+|.+.|+.+| +.--|--.+|++++.....
T Consensus 15 V~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 15 LAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp HHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 557999999999 4556777889988877544
No 33
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=28.47 E-value=46 Score=21.98 Aligned_cols=30 Identities=27% Similarity=0.409 Sum_probs=21.2
Q ss_pred ceeeCCCCCCC-CHHHHHHHHHHHHHHhhhc
Q 042504 57 PLIDLHGFLSG-DERATAEAIDLVRGACVNH 86 (286)
Q Consensus 57 PvIDl~~l~~~-d~~~~~~~~~~l~~A~~~~ 86 (286)
|+|.+.-+... +++.+++++++|.+++.+.
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~ 31 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRH 31 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55665444344 6788889999999888763
No 34
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=28.14 E-value=27 Score=29.70 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=27.4
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++++... ++. ++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~--g~~----ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GTD----AIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS--SSH----HHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC--CCH----HHHHHHHHHHccCCEEEEcCCCc
Confidence 5899887643 343 45677888888888899999996
No 35
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=27.36 E-value=46 Score=21.31 Aligned_cols=29 Identities=17% Similarity=0.238 Sum_probs=17.5
Q ss_pred ceeeCCCCC---CCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFL---SGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~---~~d~~~~~~~~~~l~~A~~~ 85 (286)
|.|.+.-+. ..+++.+++++++|.+++.+
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~ 32 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVK 32 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 455554443 34666777777777776653
No 36
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=27.23 E-value=71 Score=19.82 Aligned_cols=21 Identities=24% Similarity=0.188 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHcCCChhH
Q 042504 190 WKLSGVLFELLAMSLGVDRKH 210 (286)
Q Consensus 190 ~~l~~~ll~~la~~Lgl~~~~ 210 (286)
.+|+..|.+++++.||.++++
T Consensus 18 ~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 18 RELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHhCCCccc
Confidence 478888999999999998754
No 37
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=27.08 E-value=57 Score=27.64 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=37.3
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHHHHHHHHHHHHhhcCC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKL 114 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~l~~~~~~~~~~FF~l 114 (286)
++|.=|||+..++ + +..++|++|+.++|...+.|-.++.+ +..+.++.|=.+
T Consensus 14 aei~gvdl~~~l~--~----~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 14 AQISGVDISRDIS--A----EERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp EEEESCCTTSCCC--H----HHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred EEEeCCCccccCC--H----HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 4677789987442 2 33567999999999999999888764 344566666543
No 38
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=26.86 E-value=81 Score=27.85 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=37.7
Q ss_pred ceeEEeecCCCCCCCCCccccccccCC------ceEEEecCCCCceEEE-eCCeEEEeccCCCcEEEecCCC
Q 042504 220 SIVRFNFYPPCKNSALTLGTGPHYDPN------SLTILHQEQVEGLEVF-SNNKWQTIRPRSDALVINIGDT 284 (286)
Q Consensus 220 ~~lr~~~YP~~~~~~~~~g~~~HtD~~------~lTlL~qd~v~GLqV~-~~g~W~~V~p~pg~~vVNiGD~ 284 (286)
..+-+|+|.+- . ++++|.|-. +.||=+- ...-+.+. ++|.++.|.-.+|+++|.-|+.
T Consensus 198 n~~lvN~Y~~G-----~-~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~ 262 (345)
T 3tht_A 198 DQMTINQYEPG-----Q-GIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGES 262 (345)
T ss_dssp SEEEEEEECTT-----C-CEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHH
T ss_pred CEEEEEEecCC-----C-CEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHH
Confidence 35678999762 2 789999984 2233221 11223333 2477899999999999998863
No 39
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=26.75 E-value=1.2e+02 Score=24.28 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=34.8
Q ss_pred eeEEeecCCCCCCCCCccccccccCC--------ceEEEecCCCCceEEEeC----------CeEEEeccCCCcEEEecC
Q 042504 221 IVRFNFYPPCKNSALTLGTGPHYDPN--------SLTILHQEQVEGLEVFSN----------NKWQTIRPRSDALVINIG 282 (286)
Q Consensus 221 ~lr~~~YP~~~~~~~~~g~~~HtD~~--------~lTlL~qd~v~GLqV~~~----------g~W~~V~p~pg~~vVNiG 282 (286)
..-+|+|.+-. -++++|.|-. +.+|=+- ...-+.+.+. +..+.+.-.+|.++|.-|
T Consensus 101 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 45699998733 2688888862 1222222 1122333321 257888888999999888
Q ss_pred CC
Q 042504 283 DT 284 (286)
Q Consensus 283 D~ 284 (286)
++
T Consensus 175 ~~ 176 (204)
T 3s57_A 175 PT 176 (204)
T ss_dssp TH
T ss_pred hh
Confidence 64
No 40
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=26.13 E-value=41 Score=21.94 Aligned_cols=29 Identities=14% Similarity=0.115 Sum_probs=18.6
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|+|.+.-+...+.+.+++++++|.+++.+
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~ 30 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAA 30 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 56665544344667777777777777665
No 41
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=25.68 E-value=93 Score=25.32 Aligned_cols=57 Identities=14% Similarity=0.117 Sum_probs=36.1
Q ss_pred eeEEeecCCCCCCCCCccccccccC-----C--ceEEEecCCCCceEEEe---CCeEEEeccCCCcEEEecCCC
Q 042504 221 IVRFNFYPPCKNSALTLGTGPHYDP-----N--SLTILHQEQVEGLEVFS---NNKWQTIRPRSDALVINIGDT 284 (286)
Q Consensus 221 ~lr~~~YP~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~v~GLqV~~---~g~W~~V~p~pg~~vVNiGD~ 284 (286)
..-+|+|.+ +. ++++|.|- + ++++=+-. ..-+.+.+ .+..+.|.-.+|.++|.-|+.
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 467999976 23 78999992 1 22332221 12233322 356888999999999998864
No 42
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=24.71 E-value=20 Score=29.11 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=25.7
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhcc---EEEEEeCCC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHG---FFQVINHGV 96 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~G---fF~v~nhGi 96 (286)
..||+++.. .+ .+++++.+.+++.+.+ .+.+.|||+
T Consensus 138 ~~vp~~~~~---~g----~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE---QN----IPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC---SC----HHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC---CC----HHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 368888763 22 2367778888888765 788899996
No 43
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=24.70 E-value=2.7e+02 Score=22.35 Aligned_cols=19 Identities=5% Similarity=0.246 Sum_probs=15.3
Q ss_pred CeEEEeccCCCcEEEecCC
Q 042504 265 NKWQTIRPRSDALVINIGD 283 (286)
Q Consensus 265 g~W~~V~p~pg~~vVNiGD 283 (286)
..++.|.|.+|.+||.-..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp CSEEEECCCTTEEEEEETT
T ss_pred CCeeEecCCCCeEEEECCC
Confidence 4577899999999987654
No 44
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.58 E-value=71 Score=23.51 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=29.2
Q ss_pred eeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCHH-HHHHHHHH
Q 042504 58 LIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDAS-LLKAAIEE 107 (286)
Q Consensus 58 vIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~~-l~~~~~~~ 107 (286)
|||++.+.... + ..+|.+.|+++|+..|=-.|.+.+ +.+.+.+.
T Consensus 51 VlDl~~l~~~~-----d-l~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~~~ 95 (120)
T 3ghf_A 51 VINVSGLESPV-----N-WPELHKIVTSTGLRIIGVSGCKDASLKVEIDRM 95 (120)
T ss_dssp EEEEEECCSSC-----C-HHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHH
T ss_pred EEEccccCChH-----H-HHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHC
Confidence 67998875211 1 456889999999998766665544 55554443
No 45
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=23.30 E-value=58 Score=27.63 Aligned_cols=38 Identities=13% Similarity=0.316 Sum_probs=26.0
Q ss_pred CCceeeCCC-------CCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHG-------FLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~-------l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++++.. ...+++ ++++.|.+++.+.-.+.+.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~----ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSP----DVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSH----HHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCH----HHHHHHHHHhccCCEEEEcCCce
Confidence 699998631 123344 44666777777777888999996
No 46
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=23.15 E-value=1.3e+02 Score=26.03 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHhhhccEEEEEe-CCCCHHHHHHHHHHHHh
Q 042504 70 RATAEAIDLVRGACVNHGFFQVIN-HGVDASLLKAAIEETDS 110 (286)
Q Consensus 70 ~~~~~~~~~l~~A~~~~GfF~v~n-hGi~~~l~~~~~~~~~~ 110 (286)
+.+.+++++|.+.+.++..++|++ +|++...++++.+..|.
T Consensus 6 e~K~~~v~el~e~l~~~~~v~vv~~~gl~v~ql~~LR~~lR~ 47 (312)
T 3u5i_q 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRG 47 (312)
T ss_dssp HHHHHHHHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 467788899999999998887776 68998888888877664
No 47
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=23.08 E-value=80 Score=27.14 Aligned_cols=52 Identities=21% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeC-CCCHHHHHHHHHHHHhhcCC
Q 042504 54 LREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINH-GVDASLLKAAIEETDSIFKL 114 (286)
Q Consensus 54 ~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nh-Gi~~~l~~~~~~~~~~FF~l 114 (286)
++|+=|||+... ++ +..++|++|+.++|...+.|- .++.+ ...+.++.|=.+
T Consensus 20 aei~gvdl~~~L--~d----~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDL--DD----ATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTC--CH----HHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccC--CH----HHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 467778998543 22 346779999999999999998 78764 344566666444
No 48
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=21.99 E-value=38 Score=28.86 Aligned_cols=37 Identities=16% Similarity=0.197 Sum_probs=26.9
Q ss_pred CCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCC
Q 042504 55 REPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGV 96 (286)
Q Consensus 55 ~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi 96 (286)
.||++|+..+.. +. +.++.|.+++.+.-.+.+.|||+
T Consensus 156 ~v~~~~y~~~~~-~~----el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL-DL----SERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSC-CH----HHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCC-CH----HHHHHHHHHhCcCCEEEEcCCce
Confidence 689998876431 33 33556777788888999999996
No 49
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=21.80 E-value=59 Score=21.56 Aligned_cols=29 Identities=7% Similarity=-0.012 Sum_probs=18.6
Q ss_pred ceeeCCCCCCCCHHHHHHHHHHHHHHhhh
Q 042504 57 PLIDLHGFLSGDERATAEAIDLVRGACVN 85 (286)
Q Consensus 57 PvIDl~~l~~~d~~~~~~~~~~l~~A~~~ 85 (286)
|+|.+.-+...+.+.++++++.|.+++.+
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~ 30 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISE 30 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 55555544344667777777777777654
No 50
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=20.92 E-value=55 Score=27.94 Aligned_cols=22 Identities=18% Similarity=0.160 Sum_probs=17.8
Q ss_pred CCCCCccccccccCCceEEEec
Q 042504 232 NSALTLGTGPHYDPNSLTILHQ 253 (286)
Q Consensus 232 ~~~~~~g~~~HtD~~~lTlL~q 253 (286)
.+...++..+|.+..++|++++
T Consensus 47 ~~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 47 FERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp ECTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCCcEEEEEEEE
Confidence 3344678899999999999976
No 51
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.41 E-value=69 Score=27.18 Aligned_cols=17 Identities=18% Similarity=0.104 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHcCCC
Q 042504 191 KLSGVLFELLAMSLGVD 207 (286)
Q Consensus 191 ~l~~~ll~~la~~Lgl~ 207 (286)
..|.+|.+.++++++.+
T Consensus 170 GTA~~la~~i~~~~~~~ 186 (272)
T 4f3y_A 170 GTALMMGETIAAATGRS 186 (272)
T ss_dssp HHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHhCcc
Confidence 56777888888888765
Done!