BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042507
(472 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 213/421 (50%), Gaps = 15/421 (3%)
Query: 33 VKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFV 92
+ +PPG G P +GETL + F +Q+++G IFKT + G + ++ + A +F+
Sbjct: 11 LPIPPGDFGLPWLGETLNFLND--GDFGKKRQQQFGPIFKTRLFGKNVIFISGALANRFL 68
Query: 93 LVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAA 152
+ F+ T+P S L+GP+A+ G+ H RKI+ + + + ++
Sbjct: 69 FTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIV 128
Query: 153 VAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTN 212
L+ W + + + ++++++F+V T+F K + +L + +G S
Sbjct: 129 QGYLEQWGKANEVIWYPQLRRMTFDVAA-TLFMGEKVSQNPQLFPWFETYIQGLFSLPIP 187
Query: 213 IPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADN 272
+P T + K+ +AR L L II+ R+++ E+D LG LL ++D+N + LS ++ D
Sbjct: 188 LPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQ 247
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN 332
I+ +LFA +T S ++ L S+ + + +++ +L++E L+ +
Sbjct: 248 ILLLLFAGHETLTSALSSFCLLLGQHSDIR---ERVRQEQNKLQLSQE----LTAETLKK 300
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
MP +V+ E LR+ + FRE + D +++G+ PKGW V H +P+ + DP+
Sbjct: 301 MPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPE 360
Query: 393 KFDPSRF-----EVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQ 447
KFDP RF P +PFG G+ C G E A+LEM + L+ +F W ++ Q
Sbjct: 361 KFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQ 420
Query: 448 S 448
+
Sbjct: 421 N 421
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 199/433 (45%), Gaps = 26/433 (6%)
Query: 36 PPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSE--AAKFVL 93
P G PL+G +L ++DP + F ++ + +G++ + LG V ++ L
Sbjct: 25 PVAGGGVPLLGHGWRL-ARDP-LAFMSQLRDHGDVVRIK-LGPKTVYAVTNPELTGALAL 81
Query: 94 VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAV 153
H+ P + +S E L+G + G H R R+ +Q + L+AI +E A
Sbjct: 82 NPDYHIAGPLW-ESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAH 140
Query: 154 AALDSWHGGHIINTFQEMKKLSFEVGTLTIF-GHLKDNYKGELKKNYLIVDKGYNSFSTN 212
A + W G ++ E +++ V + G D L V +G
Sbjct: 141 ALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVV 200
Query: 213 IPGTPYKKALQARKRLNEILSD-------IIRERKEKRLHEKDLLGCLLNSKDENGEVLS 265
G Y+ L A +R N+ L+D II ER+ DLL LL +KD+NG+ +
Sbjct: 201 PLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDDNGDPIG 260
Query: 266 DDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL 325
+ +I D ++ +L +T AS + W+++ L D E + + E +A+ G +P+
Sbjct: 261 EQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRD--EVEAV-----TGGRPV 313
Query: 326 SWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNP 385
++ R + T V++E++R+ + R AVA+ E GY IP G ++ I +P
Sbjct: 314 AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
Query: 386 EYFTDPQKFDPSRF---EVAPKPNTFM-PFGSGVHSCPGNELAKLEMLVMIHHLVTKFRW 441
+ + D +FDP R+ A P M PF +G CP + + ++ ++ L TK+R+
Sbjct: 374 KSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
Query: 442 E-VIGSQSGIQYG 453
E V GS ++ G
Sbjct: 434 EQVAGSNDAVRVG 446
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 195/432 (45%), Gaps = 34/432 (7%)
Query: 33 VKLPPGSMG-WPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
VK PP P +G + + + P F ++YG +F ++G L S+AA
Sbjct: 10 VKSPPYIFSPIPFLGHAIA-FGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAAL 68
Query: 92 VLVTQ----------AHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAI 141
+ ++ + L P + K + P+ +F Q +K+++ L++
Sbjct: 69 LFNSKNEDLNAEDVYSRLTTPVFGKGVAYDV-PNPVFLEQ-------KKMLKSGLNIAHF 120
Query: 142 RELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFG-HLKDNYKGELKKNYL 200
++ V+ IE +SW N F+ + +L + + G ++ ++ + Y
Sbjct: 121 KQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYA 180
Query: 201 IVDKGYNSFSTNIPG----TPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNS 256
+D G++ + +PG +++ +A + + +I I++R++ + D+L LL++
Sbjct: 181 DLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDA 240
Query: 257 KDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRK 316
++G L+DD++A +IG+L A Q T+++ W+ +L + + K EQK +
Sbjct: 241 TYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFL--ARDKTLQKKCYLEQKTV-- 296
Query: 317 LNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLP 376
E PL++ Q +++ + + + E+LR+ I R A GY IP G +V
Sbjct: 297 -CGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCV 355
Query: 377 LFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMI 432
+ + + F+P R+ + + ++PFG+G H C G A +++ +
Sbjct: 356 SPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIW 415
Query: 433 HHLVTKFRWEVI 444
++ + +++I
Sbjct: 416 STMLRLYEFDLI 427
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/469 (22%), Positives = 193/469 (41%), Gaps = 43/469 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A K
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + L + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKK-------- 197
+ + AL HG +I TF + +S + ++ +FG D E
Sbjct: 128 QEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSI-VFGDRFDYEDKEFLSLLRMMLGS 186
Query: 198 -NYLIVDKG--YNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLH---EKD 248
+ G Y FS+ ++PG P ++A + + L + ++ + E ++ L +D
Sbjct: 187 FQFTATSTGQLYEMFSSVMKHLPG-PQQQAFKELQGLEDFIAKKV-EHNQRTLDPNSPRD 244
Query: 249 LLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSR 303
+ L K+ N E + + + + FA +T ++ + + L E
Sbjct: 245 FIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLNLFFAGTETVSTTLRYGFLLLMKHPEVE- 302
Query: 304 GSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV-ADVE 362
+ I ++ + QP + MP T V+ E R ++ V D +
Sbjct: 303 ----AKVHEEIDRVIGKNRQP-KFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTK 357
Query: 363 YKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHSC 418
++ + +PKG +V P+ ++ +P +F++P+ F+P F K + F+PF G C
Sbjct: 358 FRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYC 417
Query: 419 PGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
G LA++E+ + ++ FR++ S I P + + P ++
Sbjct: 418 FGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 193/470 (41%), Gaps = 45/470 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A +
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + + + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYK------------G 193
+ + AL G +I TF + +S + ++ +FG D YK G
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLG 185
Query: 194 ELKKNYLIVDKGYNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE---K 247
+ + Y FS+ ++PG P ++A Q + L + ++ + E ++ L +
Sbjct: 186 SFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKV-EHNQRTLDPNSPR 243
Query: 248 DLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETS 302
D + L K+ N E + + + + FA +T ++ + + L E
Sbjct: 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLNLFFAGTETVSTTLRYGFLLLMKHPEVE 302
Query: 303 RGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADV 361
+ I ++ + QP + MP V+ E R +I R D
Sbjct: 303 -----AKVHEEIDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDT 356
Query: 362 EYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHS 417
+++ + +PKG +V P+ ++ +P +F++PQ F+P F K + F+PF G +
Sbjct: 357 KFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRN 416
Query: 418 CPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
C G LA++E+ + ++ FR + S I P + + P ++
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 187/449 (41%), Gaps = 59/449 (13%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P++G LQ+ + F +++YG++F ++ P V+L ++A +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 VLVTQAHLFKPTYPKSKERLIGP----SAIFFHQGDYHLRLRKIVQGSLS---------- 137
LV QA F + K ++ P + F G+ LR+ ++
Sbjct: 68 ALVDQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 138 ---LEAIRELVTDIEAAAVAALDS---WHG--GHIINTFQEMKKLSFEVGTLTIFGHLKD 189
E R LV ++ + A LD+ +H +II + K+ ++ L
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 190 NYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL----- 244
+ V + ++ F + PGT Q + L EI + I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKHFPGT----HRQIYRNLQEINTFIGQSVEKHRATLDPS 240
Query: 245 HEKDLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKYL 295
+ +D + L + D + E + I ++ + FA +TT++ + + ++KY
Sbjct: 241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL-TVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 296 HDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFR 355
H T R K I + ++P + MP T V+ E R+ +I F
Sbjct: 300 H---VTERVQKEIEQVIG-------SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVP 349
Query: 356 EAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMP 410
V D +++GY+IPK +V P+ + H+P YF P F+P F A + FMP
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F G C G +A+ E+ + ++ F
Sbjct: 410 FSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 186/449 (41%), Gaps = 59/449 (13%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P++G LQ+ + F +++YG++F ++ P V+L ++A +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 VLVTQAHLFKPTYPKSKERLIGP----SAIFFHQGDYHLRLRKIVQGSLS---------- 137
LV QA F + K ++ P + F G+ LR+ ++
Sbjct: 68 ALVDQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 138 ---LEAIRELVTDIEAAAVAALDS---WHG--GHIINTFQEMKKLSFEVGTLTIFGHLKD 189
E R LV ++ + A LD+ +H +II + K+ ++ L
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 190 NYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL----- 244
+ V + ++ F PGT Q + L EI + I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGT----HRQIYRNLQEINTFIGQSVEKHRATLDPS 240
Query: 245 HEKDLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKYL 295
+ +D + L + D + E + I ++ + FA +TT++ + + ++KY
Sbjct: 241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL-TVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 296 HDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFR 355
H T R K I + ++P + MP T V+ E R+ +I F
Sbjct: 300 H---VTERVQKEIEQVIG-------SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVP 349
Query: 356 EAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMP 410
V D +++GY+IPK +V P+ + H+P YF P F+P F A + FMP
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F G C G +A+ E+ + ++ F
Sbjct: 410 FSLGKRICAGEGIARTELFLFFTTILQNF 438
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RKE+ +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 204 EARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 263
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 264 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 316
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 374
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 375 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 414
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 186/449 (41%), Gaps = 59/449 (13%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P++G LQ+ + F +++YG++F ++ P V+L ++A +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 VLVTQAHLFKPTYPKSKERLIGP----SAIFFHQGDYHLRLRKIVQGSLS---------- 137
LV QA F + K ++ P + F G+ LR+ ++
Sbjct: 68 ALVDQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 138 ---LEAIRELVTDIEAAAVAALDS---WHG--GHIINTFQEMKKLSFEVGTLTIFGHLKD 189
E R LV ++ + A LD+ +H +II + K+ ++ L
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 190 NYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL----- 244
+ V + ++ F PGT Q + L EI + I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGT----HRQIYRNLQEINTFIGQSVEKHRATLDPS 240
Query: 245 HEKDLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKYL 295
+ +D + L + D + E + I ++ + FA +TT++ + + ++KY
Sbjct: 241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL-TVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 296 HDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFR 355
H T R K I + ++P + MP T V+ E R+ +I F
Sbjct: 300 H---VTERVQKEIEQVIG-------SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVP 349
Query: 356 EAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMP 410
V D +++GY+IPK +V P+ + H+P YF P F+P F A + FMP
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F G C G +A+ E+ + ++ F
Sbjct: 410 FSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 186/449 (41%), Gaps = 59/449 (13%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P++G LQ+ + F +++YG++F ++ P V+L ++A +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 VLVTQAHLFKPTYPKSKERLIGP----SAIFFHQGDYHLRLRKIVQGSLS---------- 137
LV QA F + K ++ P + F G+ LR+ ++
Sbjct: 68 ALVDQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 138 ---LEAIRELVTDIEAAAVAALDS---WHG--GHIINTFQEMKKLSFEVGTLTIFGHLKD 189
E R LV ++ + A LD+ +H +II + K+ ++ L
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 190 NYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL----- 244
+ V + ++ F PGT Q + L EI + I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGT----HRQIYRNLQEINTFIGQSVEKHRATLDPS 240
Query: 245 HEKDLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKYL 295
+ +D + L + D + E + I ++ + FA +TT++ + + ++KY
Sbjct: 241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL-TVLSLFFAGTETTSTTLRYGFLLMLKYP 299
Query: 296 HDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFR 355
H T R K I + ++P + MP T V+ E R+ +I F
Sbjct: 300 H---VTERVQKEIEQVIG-------SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVP 349
Query: 356 EAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMP 410
V D +++GY+IPK +V P+ + H+P YF P F+P F A + FMP
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F G C G +A+ E+ + ++ F
Sbjct: 410 FSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RKE+ +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 203 EARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 262
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 263 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 315
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 316 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 373
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 374 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 413
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RKE+ +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 205 EARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 264
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 265 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 317
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 318 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 375
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 376 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 415
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RKE+ +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 204 EARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 263
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 264 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 316
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 317 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 374
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 375 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 414
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RKE+ +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 217 EARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 276
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 277 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 329
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 387
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 388 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 427
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 182/458 (39%), Gaps = 56/458 (12%)
Query: 31 KKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAK 90
K +K PP GWPL+G L L ++P++ + +RYG++ + I P ++L+ + +
Sbjct: 13 KGLKSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIR 71
Query: 91 FVLVTQAHLFK--PTYPKSKERLIGPSAIF-FHQGDYHLRLRKIVQGSLSLEAI------ 141
LV Q FK P S G S F G R++ Q +L+ +I
Sbjct: 72 QALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPAS 131
Query: 142 ------RELVTDIEAAAVAALDSWHGG--HIINTFQEMKKLSFEVGTLTIFGHLKDNYKG 193
E V+ A ++ L G H Q + ++ +G + H ++
Sbjct: 132 SSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDE 191
Query: 194 ELKKNYLIVDKGYNSFSTNIPGTPY----------KKALQARKRLNE----ILSDIIRER 239
L +V + T G P ALQ K N+ L ++E
Sbjct: 192 MLS----LVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEH 247
Query: 240 KEK--RLHEKDLLGCLLNSKDE----NGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVK 293
+ + +D+ G L + +G ++ +KI + + + A DT + ++W +
Sbjct: 248 YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLM 307
Query: 294 YLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFT 353
YL + E R QK + + +P + +P +LE+ R +S + FT
Sbjct: 308 YLVTKPEIQRKI-----QKELDTVIGRERRP-RLSDRPQLPYLEAFILETFRHSSFLPFT 361
Query: 354 FREAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA-------PKP 405
+ D G+ IPK V ++H+PE + DP +F P RF A P
Sbjct: 362 IPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLS 421
Query: 406 NTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
M FG G C G LAK E+ + + L+ + + V
Sbjct: 422 EKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSV 459
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 194/470 (41%), Gaps = 45/470 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A +
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + + + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
+ + AL G +I TF + +S + ++ +FG D YK + + L + G
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLG 185
Query: 206 ------------YNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE---K 247
Y FS+ ++PG P ++A Q + L + ++ + E ++ L +
Sbjct: 186 IFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQCLQGLEDFIAKKV-EHNQRTLDPNSPR 243
Query: 248 DLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETS 302
D + L K+ N E + + + + +T ++ + + L E
Sbjct: 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLQLFIGGTETVSTTLRYGFLLLMKHPEVE 302
Query: 303 RGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADV 361
+ I ++ + QP + MP V+ E R +I + R D
Sbjct: 303 -----AKVHEEIDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT 356
Query: 362 EYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHS 417
+++ + +PKG +V P+ ++ +P +F++PQ F+P F K + F+PF G +
Sbjct: 357 KFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRN 416
Query: 418 CPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
C G LA++E+ + ++ FR + S I P + + P ++
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 194/470 (41%), Gaps = 45/470 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A +
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + + + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
+ + AL G +I TF + +S + ++ +FG D YK + + L + G
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLG 185
Query: 206 ------------YNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE---K 247
Y FS+ ++PG P ++A Q + L + ++ + E ++ L +
Sbjct: 186 IFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKV-EHNQRTLDPNSPR 243
Query: 248 DLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETS 302
D + L K+ N E + + + + +T ++ + + L E
Sbjct: 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLNLFIGGTETVSTTLRYGFLLLMKHPEVE 302
Query: 303 RGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADV 361
+ I ++ + QP + MP V+ E R +I + R D
Sbjct: 303 -----AKVHEEIDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT 356
Query: 362 EYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHS 417
+++ + +PKG +V P+ ++ +P +F++PQ F+P F K + F+PF G +
Sbjct: 357 KFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRN 416
Query: 418 CPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
C G LA++E+ + ++ FR + S I P + + P ++
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 194/470 (41%), Gaps = 45/470 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A +
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + + + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
+ + AL G +I TF + +S + ++ +FG D YK + + L + G
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLG 185
Query: 206 ------------YNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE---K 247
Y FS+ ++PG P ++A Q + L + ++ + E ++ L +
Sbjct: 186 IFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKV-EHNQRTLDPNSPR 243
Query: 248 DLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETS 302
D + L K+ N E + + + + +T ++ + + L E
Sbjct: 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLQLFIGGTETVSTTLRYGFLLLMKHPEVE 302
Query: 303 RGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADV 361
+ I ++ + QP + MP V+ E R +I + R D
Sbjct: 303 -----AKVHEEIDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT 356
Query: 362 EYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHS 417
+++ + +PKG +V P+ ++ +P +F++PQ F+P F K + F+PF G +
Sbjct: 357 KFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRN 416
Query: 418 CPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
C G LA++E+ + ++ FR + S I P + + P ++
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 194/470 (41%), Gaps = 45/470 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P IG LQL ++ +RYG +F H+ V+L +A +
Sbjct: 8 KGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVRE 67
Query: 92 VLVTQAHLFKPTYPKSK-ERLIGPSAIFFHQGDYHLRLRKIVQGSL-----SLEAIRELV 145
LV QA F ++ + + + F G+ +LR+ +L I E +
Sbjct: 68 ALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERI 127
Query: 146 TDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
+ + AL G +I TF + +S + ++ +FG D YK + + L + G
Sbjct: 128 QEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI-VFGDRFD-YKDKEFLSLLRMMLG 185
Query: 206 ------------YNSFST---NIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE---K 247
Y FS+ ++PG P ++A Q + L + ++ + E ++ L +
Sbjct: 186 IFQFTSTSTGQLYEMFSSVMKHLPG-PQQQAFQLLQGLEDFIAKKV-EHNQRTLDPNSPR 243
Query: 248 DLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETS 302
D + L K+ N E + + + + +T ++ + + L E
Sbjct: 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVM-TTLQLFVGGTETVSTTLRYGFLLLMKHPEVE 302
Query: 303 RGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADV 361
+ I ++ + QP + MP V+ E R +I + R D
Sbjct: 303 -----AKVHEEIDRVIGKNRQP-KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDT 356
Query: 362 EYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNTFMPFGSGVHS 417
+++ + +PKG +V P+ ++ +P +F++PQ F+P F K + F+PF G +
Sbjct: 357 KFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRN 416
Query: 418 CPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPARFS 467
C G LA++E+ + ++ FR + S I P + + P ++
Sbjct: 417 CFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYT 466
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 185/449 (41%), Gaps = 59/449 (13%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P++G LQ+ + F +++YG++F ++ P V+L ++A +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIRE 67
Query: 92 VLVTQAHLFKPTYPKSKERLIGP----SAIFFHQGDYHLRLRKIVQGSLS---------- 137
LV QA F + K ++ P + F G+ LR+ ++
Sbjct: 68 ALVDQAEAFS---GRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVE 124
Query: 138 ---LEAIRELVTDIEAAAVAALDS---WHG--GHIINTFQEMKKLSFEVGTLTIFGHLKD 189
E R LV ++ + A LD+ +H +II + K+ ++ L
Sbjct: 125 ERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 190 NYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL----- 244
+ V + ++ F PGT Q + L EI + I + ++ R
Sbjct: 185 QSFSLISSFSSQVFELFSGFLKYFPGT----HRQIYRNLQEINTFIGQSVEKHRATLDPS 240
Query: 245 HEKDLLGCLL-----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKYL 295
+ +D + L + D + E + I ++ + A +TT++ + + ++KY
Sbjct: 241 NPRDFIDVYLLRMEKDKSDPSSEFHHQNLIL-TVLSLFAAGTETTSTTLRYGFLLMLKYP 299
Query: 296 HDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFR 355
H T R K I + ++P + MP T V+ E R+ +I F
Sbjct: 300 H---VTERVQKEIEQVIG-------SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVP 349
Query: 356 EAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMP 410
V D +++GY+IPK +V P+ + H+P YF P F+P F A + FMP
Sbjct: 350 HTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMP 409
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F G C G +A+ E+ + ++ F
Sbjct: 410 FSLGKRICLGEGIARTELFLFFTTILQNF 438
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 195/467 (41%), Gaps = 63/467 (13%)
Query: 26 KTEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLAS 85
K K +K PPG GWPLIG L L ++P++ + ++YG++ + I P V+L+
Sbjct: 3 KKTSSKGLKNPPGPWGWPLIGHMLTL-GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSG 61
Query: 86 SEAAKFVLVTQAHLFKPTYPKSKERLI--GPSAIFF-HQGDYHLRLRKIVQGSLSLEAIR 142
+ + LV Q FK LI G S F G R++ Q L +I
Sbjct: 62 LDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIA 121
Query: 143 ELVTDIEAAAVAALDSWHGGHIINTFQEM-------KKLSFEVGTLT------IFGHLKD 189
+ + S +I+T QE+ + V ++T FG D
Sbjct: 122 SDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYD 181
Query: 190 NYKGELKKNYLIVDK-----GYNSFSTNIPGTPY--KKALQARKRLNE----ILSDIIRE 238
+ EL + + G + + IP Y +L A K LNE + +++E
Sbjct: 182 HNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKE 241
Query: 239 RKE--KRLHEKDLLGCLLN-----SKDENGEV-LSDDKIADNIIGVLFAAQDTTASVMTW 290
+ ++ H +D+ L+ DEN V LSD+KI + ++ + A DT + ++W
Sbjct: 242 HYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISW 301
Query: 291 IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQT------RNMPVTYKVVLESL 344
+ YL + + RK+ EE + + ++ ++P +LE+
Sbjct: 302 SLMYL------------VMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETF 349
Query: 345 RMASIISFTFREAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAP 403
R +S + FT + D KG+ IPKG V I+H+ + + +P +F P RF + P
Sbjct: 350 RHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERF-LTP 408
Query: 404 K-------PNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
+ FG G C G +A+ E+ + + L+ + + V
Sbjct: 409 DGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 455
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 21/225 (9%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE----KDLLGCLLNSKDENGEVLSDDKIADNIIGVLF 278
+AR L +ILS+II RK +++ DLL LL++ +G +S ++ I+ +F
Sbjct: 217 EARTELQKILSEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMF 276
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN-MPVTY 337
A Q T++ TW + +L + + +A+RK EE L++ + MP
Sbjct: 277 AGQHTSSITTTWSMLHLMHPA-------NVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE 329
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFD 395
+ ES+R + R+ +ADV+ Y++PKG + PL HH+ E F +P+++D
Sbjct: 330 RCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS--HHDEEAFPEPRRWD 387
Query: 396 PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
P R E F+ FG+GVH C G + L++ + L T FR
Sbjct: 388 PERDEKV--EGAFIGFGAGVHKCIGQKFGLLQVKTI---LATAFR 427
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 185/449 (41%), Gaps = 64/449 (14%)
Query: 37 PGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQ 96
PG P +G L Y + +F K+YG+++ + P + + + K VLV +
Sbjct: 17 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 75
Query: 97 AH-LFKPTYPKSKERLIGP-----SAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEA 150
+ +F + R GP SAI + + RLR ++ + + ++E+V I
Sbjct: 76 CYSVF------TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQ 129
Query: 151 AAVAALDSWH----GGHIINTFQEMKKLSFEVGTLTIFG-----------HLKDNYKGEL 195
+ + G + S +V T T FG +N K L
Sbjct: 130 YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL 189
Query: 196 KKNYLIVDKGYNS---FSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL-----HEK 247
+ ++L D + S F IP + + L ++ KE RL H
Sbjct: 190 RFDFL--DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRV 247
Query: 248 DLLGCLLNSKD----ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSR 303
D L +++S++ E+ + LSD ++ I +FA +TT+SV+++I+ L + +
Sbjct: 248 DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQ 307
Query: 304 GSKGIAEQKAIRKLNEE------GNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREA 357
KL EE P ++ M VV E+LR+ I R
Sbjct: 308 ------------KLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC 355
Query: 358 VADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPK----PNTFMPFGS 413
DVE G IPKG V+ +H +P+Y+T+P+KF P RF K P + PFGS
Sbjct: 356 KKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGS 415
Query: 414 GVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
G +C G A + M + + ++ F ++
Sbjct: 416 GPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 185/449 (41%), Gaps = 64/449 (14%)
Query: 37 PGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQ 96
PG P +G L Y + +F K+YG+++ + P + + + K VLV +
Sbjct: 19 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 77
Query: 97 AH-LFKPTYPKSKERLIGP-----SAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEA 150
+ +F + R GP SAI + + RLR ++ + + ++E+V I
Sbjct: 78 CYSVF------TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQ 131
Query: 151 AAVAALDSWH----GGHIINTFQEMKKLSFEVGTLTIFG-----------HLKDNYKGEL 195
+ + G + S +V T T FG +N K L
Sbjct: 132 YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL 191
Query: 196 KKNYLIVDKGYNS---FSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL-----HEK 247
+ ++L D + S F IP + + L ++ KE RL H
Sbjct: 192 RFDFL--DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRV 249
Query: 248 DLLGCLLNSKD----ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSR 303
D L +++S++ E+ + LSD ++ I +FA +TT+SV+++I+ L + +
Sbjct: 250 DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQ 309
Query: 304 GSKGIAEQKAIRKLNEE------GNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREA 357
KL EE P ++ M VV E+LR+ I R
Sbjct: 310 ------------KLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC 357
Query: 358 VADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPK----PNTFMPFGS 413
DVE G IPKG V+ +H +P+Y+T+P+KF P RF K P + PFGS
Sbjct: 358 KKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGS 417
Query: 414 GVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
G +C G A + M + + ++ F ++
Sbjct: 418 GPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 185/449 (41%), Gaps = 64/449 (14%)
Query: 37 PGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQ 96
PG P +G L Y + +F K+YG+++ + P + + + K VLV +
Sbjct: 18 PGPTPLPFLGNILS-YHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKE 76
Query: 97 AH-LFKPTYPKSKERLIGP-----SAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEA 150
+ +F + R GP SAI + + RLR ++ + + ++E+V I
Sbjct: 77 CYSVF------TNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQ 130
Query: 151 AAVAALDSWH----GGHIINTFQEMKKLSFEVGTLTIFG-----------HLKDNYKGEL 195
+ + G + S +V T T FG +N K L
Sbjct: 131 YGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLL 190
Query: 196 KKNYLIVDKGYNS---FSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRL-----HEK 247
+ ++L D + S F IP + + L ++ KE RL H
Sbjct: 191 RFDFL--DPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRV 248
Query: 248 DLLGCLLNSKD----ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSR 303
D L +++S++ E+ + LSD ++ I +FA +TT+SV+++I+ L + +
Sbjct: 249 DFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQ 308
Query: 304 GSKGIAEQKAIRKLNEE------GNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREA 357
KL EE P ++ M VV E+LR+ I R
Sbjct: 309 ------------KLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVC 356
Query: 358 VADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPK----PNTFMPFGS 413
DVE G IPKG V+ +H +P+Y+T+P+KF P RF K P + PFGS
Sbjct: 357 KKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGS 416
Query: 414 GVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
G +C G A + M + + ++ F ++
Sbjct: 417 GPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 180/447 (40%), Gaps = 63/447 (14%)
Query: 36 PPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVT 95
PPG WPLIG + Q ++ FA +RYG++F+ + CP V+L A LV
Sbjct: 11 PPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 96 QAHLF--KPTYPKSKERLIGPSAIFFHQGDY------------------HLRLRKIVQGS 135
Q F +P++ + G S F H ++ R R++++G
Sbjct: 70 QGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGH 129
Query: 136 LSLEAIRELVTD-IEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGE 194
+ EA RELV + +A A ++ M + F + H ++
Sbjct: 130 VLSEA-RELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCR----YSHDDPEFREL 184
Query: 195 LKKNYLIVDK-GYNSFSTNIP-----GTPYKKALQARKRLNEILSDIIRERKEKRLHE-- 246
L N G S +P P + + ++LN S+ I ++ +
Sbjct: 185 LSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLR 244
Query: 247 -----KDLLGCLLNSKDE--------NGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVK 293
+D++ + S ++ G L + + I + A+QDT ++ + W++
Sbjct: 245 PGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLL 304
Query: 294 YLHDQSETSRGSKGIAEQKAIR-KLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISF 352
+ + +Q R +L G+QP N+P + E++R +S +
Sbjct: 305 LFTRYPDVQTRVQAELDQVVGRDRLPCMGDQP-------NLPYVLAFLYEAMRFSSFVPV 357
Query: 353 TFREAV-ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF----EVAPKPNT 407
T A A+ GY IPK V +++H+P + +P+ FDP+RF + K T
Sbjct: 358 TIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLT 417
Query: 408 --FMPFGSGVHSCPGNELAKLEMLVMI 432
M F G C G EL+K+++ + I
Sbjct: 418 SRVMIFSVGKRRCIGEELSKMQLFLFI 444
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 193/481 (40%), Gaps = 70/481 (14%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P+IG QL ++ F +R+G +F ++ V++ +A K
Sbjct: 8 KGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKE 67
Query: 92 VLVTQAHLFK-----PTYPKSKERLIGPSAIFFHQGDYHLRLRKIV-----------QGS 135
L+ F P + ++R I F+ G +R+ QG+
Sbjct: 68 ALLDYKDEFSGRGDLPAFHAHRDR-----GIIFNNGPTWKDIRRFSLTTLRNYGMGKQGN 122
Query: 136 LS---------LEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH 186
S LEA+R+ T + L ++I K + +
Sbjct: 123 ESRIQREAHFLLEALRK--TQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMY 180
Query: 187 LKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE 246
L + L +L + + SF +PG+ ++K ++ + E +S+ ++E +
Sbjct: 181 LFNENFHLLSTPWLQLYNNFPSFLHYLPGS-HRKVIKNVAEVKEYVSERVKEHHQSLDPN 239
Query: 247 --KDLLGCLL----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW----IVKY-- 294
+DL CLL K + + D I + + FA +TT++ + + ++KY
Sbjct: 240 CPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPE 299
Query: 295 ----LHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASII 350
LH++ + G I AI+ E MP VV E R +++
Sbjct: 300 IEEKLHEEIDRVIGPSRIP---AIKDRQE-------------MPYMDAVVHEIQRFITLV 343
Query: 351 SFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKP 405
EA D ++GYLIPKG V+P ++ ++ + F DP+KF P F
Sbjct: 344 PSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYS 403
Query: 406 NTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIPYQGFPAR 465
+ F PF +G C G LA++E+ +++ ++ F + + I P I + P R
Sbjct: 404 DYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPR 463
Query: 466 F 466
+
Sbjct: 464 Y 464
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 177/432 (40%), Gaps = 37/432 (8%)
Query: 33 VKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFV 92
V LP S G G L+ + DP + G++ + G V+L+ S A +F
Sbjct: 4 VALPRVSGGHDEHGH-LEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFF 62
Query: 93 L------VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+ QA + P + G +F R + +L E ++
Sbjct: 63 FRAGDDDLDQAKAYPFMTP-----IFGEGVVF--DASPERRKEMLHNAALRGEQMKGHAA 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH-LKDNYKGELKKNYLIVDKG 205
IE + W I+ +L+ + T+ G +D G K Y +++G
Sbjct: 116 TIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSATLIGKKFRDQLDGRFAKLYHELERG 175
Query: 206 YNSFSTNIPGTP---YKKALQARKRLNEILSDIIRERKEK---RLHEKDLLGCLLNSKDE 259
+ + P P +++ +AR L +++DI+ R ++D+L L+ K E
Sbjct: 176 TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE 235
Query: 260 NGE-VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLN 318
G S D+I I ++FA T++ +W + L + A I +L+
Sbjct: 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD--------AYAAVIDELD 287
Query: 319 E--EGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLP 376
E + +S+ R +P V+ E+LR+ + R A + E +G+ I +G V
Sbjct: 288 ELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAA 347
Query: 377 LFRNIHHNPEYFTDPQKFDPSRFEVAPKPN-----TFMPFGSGVHSCPGNELAKLEMLVM 431
+ PE F DP F P+R+E + + T++PFG+G H C G A +++ +
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI 407
Query: 432 IHHLVTKFRWEV 443
L+ ++ +E+
Sbjct: 408 FSVLLREYEFEM 419
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 185/444 (41%), Gaps = 52/444 (11%)
Query: 32 KVKLPPGSMGW-PLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAK 90
K KLPP G P +G +Q + +DP F +K+YG IF +I G +
Sbjct: 1 KGKLPPVVHGTTPFVGHIIQ-FGKDPLGFMLKAKKKYGGIFTMNICG-----------NR 48
Query: 91 FVLVTQAHLFKPTYPKSKERLIGPSAIF------FHQGDYHL----RLRK---IVQGSLS 137
+V H + E ++ P ++ F +G + R+R+ + L+
Sbjct: 49 ITVVGDVHQHSKFFTPRNE-ILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELT 107
Query: 138 LEAIRELVTDIEAAAVAALDS-WHGGH-IINTFQEMKKLSFEVGTLTIFGH-----LKDN 190
+ + I+ + + W+ IN + + +FG L
Sbjct: 108 VAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDAR 167
Query: 191 YKGEL---KKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDII----RERKEKR 243
+L ++ LI + + +P + AR L +ILS+II +E +K
Sbjct: 168 QFAQLLAKMESCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKD 227
Query: 244 LHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSR 303
+ DLL LL + +G +S ++ I+ +FA Q T+ TW + +L D R
Sbjct: 228 TNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMD----PR 283
Query: 304 GSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEY 363
+ +A K ++++E Q MP + ES+R + R+ + V+
Sbjct: 284 NKRHLA--KLHQEIDEFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQV 341
Query: 364 KGYLIPKGWKVL--PLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGN 421
Y++P+G + PL H + E F +P++++P R + F FG+GVH C G
Sbjct: 342 GKYVVPEGDIIACSPLLS--HQDEEAFPNPREWNPER-NMKLVDGAFCGFGAGVHKCIGE 398
Query: 422 ELAKLEMLVMIHHLVTKFRWEVIG 445
+ L++ ++ ++ + +E++G
Sbjct: 399 KFGLLQVKTVLATVLRDYDFELLG 422
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 185/452 (40%), Gaps = 39/452 (8%)
Query: 34 KLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVL 93
KLPPG P+IG LQ+ +D + K YG +F + P V+L EA K L
Sbjct: 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 70
Query: 94 VTQAHLF--KPTYPKSKERLIGPSAIFFHQGDYH-------LRLRKIVQGSLSLE----- 139
+ F + +P ++ G +F + + + LR G S+E
Sbjct: 71 IDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 140 AIRELVTDIEAAAVAALD-----SWHGGHIINTFQEMKKLSF-EVGTLTIFGHLKDNYKG 193
R LV ++ + D ++I + K+ + + L + L +N K
Sbjct: 131 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIK- 189
Query: 194 ELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKR--LHEKDLLG 251
L ++ + ++ PGT + K L+ + + + ++E +E + +D +
Sbjct: 190 ILSSPWIQICNNFSPIIDYFPGT-HNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFID 248
Query: 252 CLL----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKG 307
C L K + + + + + + A +TT++ + + + L E +
Sbjct: 249 CFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKV-- 306
Query: 308 IAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV-ADVEYKGY 366
Q+ I ++ P ++ +MP T VV E R ++ + AV D++++ Y
Sbjct: 307 ---QEEIERVIGRNRSPCMQDRS-HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNY 362
Query: 367 LIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCPGNE 422
LIPKG +L ++ H+ + F +P+ FDP F K FMPF +G C G
Sbjct: 363 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEA 422
Query: 423 LAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGP 454
LA +E+ + + ++ F + + + P
Sbjct: 423 LAGMELFLFLTSILQNFNLKSLVDPKNLDTTP 454
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 187/447 (41%), Gaps = 59/447 (13%)
Query: 34 KLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVL 93
KLPPG P+IG LQ+ +D + K YG +F + V+L E K L
Sbjct: 11 KLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEAL 70
Query: 94 VTQAHLF--KPTYPKSKERLIGPSAIFFHQGDYH-------LRLRKIVQGSLSLE----- 139
+ F + +P ++ G +F + + + LR G S+E
Sbjct: 71 IDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 140 AIRELVTDIEAAAVAALD-----SWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGE 194
R LV ++ + D ++I + K+ ++ N +
Sbjct: 131 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQFL-------NLMEK 183
Query: 195 LKKNYLIVDKGY----NSFSTNI---PGTPYKKALQARKRLNEILSDIIRERKEKRL--- 244
L +N IV + N+F T I PGT + K L K L + SDI+ + KE +
Sbjct: 184 LNENIRIVSTPWIQICNNFPTIIDYFPGT-HNKLL---KNLAFMESDILEKVKEHQESMD 239
Query: 245 --HEKDLLGCLLNSKDENGEVLSDDKIADNII----GVLFAAQDTTASVMTWIVKYLHDQ 298
+ +D + C L ++ + + +N++ +L A +TT++ + + + L
Sbjct: 240 INNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKH 299
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTR-NMPVTYKVVLESLRMASIISFTFREA 357
E + Q+ I ++ P Q R +MP T VV E R +I + A
Sbjct: 300 PEVTAKV-----QEEIERVVGRNRSP--CMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHA 352
Query: 358 V-ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFG 412
V DV+++ YLIPKG +L ++ H+ + F +P+ FDP F K N FMPF
Sbjct: 353 VTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFS 412
Query: 413 SGVHSCPGNELAKLEMLVMIHHLVTKF 439
+G C G LA++E+ + + ++ F
Sbjct: 413 AGKRICVGEGLARMELFLFLTFILQNF 439
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 182/445 (40%), Gaps = 41/445 (9%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG P+IG LQ+ +D F K YG +F + P V+ EA K
Sbjct: 8 KGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKE 67
Query: 92 VLVTQAHLF--KPTYPKSKERLIGPSAIFFHQGDY--HLR------LRKIVQGSLSLEA- 140
L+ F + P S +R+ I G +R LR G S+E
Sbjct: 68 ALIDNGEEFSGRGNSPIS-QRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDR 126
Query: 141 IRE----LVTDIEAAAVAALD-----SWHGGHIINTFQEMKKLSF-EVGTLTIFGHLKDN 190
++E LV ++ + D ++I + K+ + + LT+ +N
Sbjct: 127 VQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNEN 186
Query: 191 YKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKR--LHEKD 248
++ L ++ V + PGT + K L+ + + ++E + + +D
Sbjct: 187 FR-ILNSPWIQVCNNFPLLIDCFPGT-HNKVLKNVALTRSYIREKVKEHQASLDVNNPRD 244
Query: 249 LLGCLL----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRG 304
+ C L KD + + + + + A +TT++ + + + L E +
Sbjct: 245 FIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVT-- 302
Query: 305 SKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVA-DVEY 363
Q+ I + P ++ +MP T VV E R + ++ AV D ++
Sbjct: 303 ---AKVQEEIDHVIGRHRSPCMQDRS-HMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKF 358
Query: 364 KGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCP 419
+ YLIPKG ++ L ++ H+ + F +P FDP F K + FMPF +G C
Sbjct: 359 RNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICA 418
Query: 420 GNELAKLEMLVMIHHLVTKFRWEVI 444
G LA++E+ + + ++ F + +
Sbjct: 419 GEGLARMELFLFLTTILQNFNLKSV 443
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 177/432 (40%), Gaps = 37/432 (8%)
Query: 33 VKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFV 92
V LP S G G L+ + DP + G++ + G V+L+ S A +F
Sbjct: 4 VALPRVSGGHDEHGH-LEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFF 62
Query: 93 L------VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+ QA + P + G + +F R + +L E ++
Sbjct: 63 FRAGDDDLDQAKAYPFMTP-----IFGEAVVF--DASPERRKEMLHNAALRGEQMKGHAA 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH-LKDNYKGELKKNYLIVDKG 205
IE + W I+ +L+ + + G +D G K Y +++G
Sbjct: 116 TIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERG 175
Query: 206 YNSFSTNIPGTP---YKKALQARKRLNEILSDIIRERKEK---RLHEKDLLGCLLNSKDE 259
+ + P P +++ +AR L +++DI+ R ++D+L L+ K E
Sbjct: 176 TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE 235
Query: 260 NGE-VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLN 318
G S D+I I ++FA T++ +W + L + A I +L+
Sbjct: 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD--------AYAAVIDELD 287
Query: 319 E--EGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLP 376
E + +S+ R +P V+ E+LR+ + R A + E +G+ I +G V
Sbjct: 288 ELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAA 347
Query: 377 LFRNIHHNPEYFTDPQKFDPSRFEVAPKPN-----TFMPFGSGVHSCPGNELAKLEMLVM 431
+ PE F DP F P+R+E + + T++PFG+G H C G A +++ +
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI 407
Query: 432 IHHLVTKFRWEV 443
L+ ++ +E+
Sbjct: 408 FSVLLREYEFEM 419
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 176/432 (40%), Gaps = 37/432 (8%)
Query: 33 VKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFV 92
V LP S G G L+ + DP + G++ + G V+L+ S A +F
Sbjct: 4 VALPRVSGGHDEHGH-LEEFRTDPIGLMQRVRDECGDVGTFQLAGKQVVLLSGSHANEFF 62
Query: 93 L------VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+ QA + P + G +F R + +L E ++
Sbjct: 63 FRAGDDDLDQAKAYPFMTP-----IFGEGVVF--DASPERRKEMLHNAALRGEQMKGHAA 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH-LKDNYKGELKKNYLIVDKG 205
IE + W I+ +L+ + + G +D G K Y +++G
Sbjct: 116 TIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERG 175
Query: 206 YNSFSTNIPGTP---YKKALQARKRLNEILSDIIRERKEK---RLHEKDLLGCLLNSKDE 259
+ + P P +++ +AR L +++DI+ R ++D+L L+ K E
Sbjct: 176 TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE 235
Query: 260 NGE-VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLN 318
G S D+I I ++FA T++ +W + L + A I +L+
Sbjct: 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD--------AYAAVIDELD 287
Query: 319 E--EGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLP 376
E + +S+ R +P V+ E+LR+ + R A + E +G+ I +G V
Sbjct: 288 ELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAA 347
Query: 377 LFRNIHHNPEYFTDPQKFDPSRFEVAPKPN-----TFMPFGSGVHSCPGNELAKLEMLVM 431
+ PE F DP F P+R+E + + T++PFG+G H C G A +++ +
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI 407
Query: 432 IHHLVTKFRWEV 443
L+ ++ +E+
Sbjct: 408 FSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 176/432 (40%), Gaps = 37/432 (8%)
Query: 33 VKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFV 92
V LP S G G L+ + DP + G++ + G V+L+ S A +F
Sbjct: 4 VALPRVSGGHDEHGH-LEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFF 62
Query: 93 L------VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+ QA + P + G +F R + +L E ++
Sbjct: 63 FRAGDDDLDQAKAYPFMTP-----IFGEGVVF--DASPERRKEMLHNAALRGEQMKGHAA 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH-LKDNYKGELKKNYLIVDKG 205
IE + W I+ +L+ + + G +D G K Y +++G
Sbjct: 116 TIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERG 175
Query: 206 YNSFSTNIPGTP---YKKALQARKRLNEILSDIIRERKEK---RLHEKDLLGCLLNSKDE 259
+ + P P +++ +AR L +++DI+ R ++D+L L+ K E
Sbjct: 176 TDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE 235
Query: 260 NGE-VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLN 318
G S D+I I ++FA T++ +W + L + A I +L+
Sbjct: 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD--------AYAAVIDELD 287
Query: 319 E--EGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLP 376
E + +S+ R +P V+ E+LR+ + R A + E +G+ I +G V
Sbjct: 288 ELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAA 347
Query: 377 LFRNIHHNPEYFTDPQKFDPSRFEVAPKPN-----TFMPFGSGVHSCPGNELAKLEMLVM 431
+ PE F DP F P+R+E + + T++PFG+G H C G A +++ +
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAI 407
Query: 432 IHHLVTKFRWEV 443
L+ ++ +E+
Sbjct: 408 FSVLLREYEFEM 419
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 29/232 (12%)
Query: 220 KALQARKRLNEILSDII--RERKE--KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG 275
+ +AR L +IL +II RE++E K + DLLG LL + +G +S ++ I+
Sbjct: 205 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 264
Query: 276 VLFAAQDTTASVMTW-IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ---PLSWTQTR 331
+FA Q T+ +W ++ +H ++ +K + KL++E ++ L++
Sbjct: 265 AMFAGQHTSTITTSWSMLHLMHPKN-----------KKWLDKLHKEIDEFPAQLNYDNVM 313
Query: 332 N-MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYF 388
+ MP + V ES+R + R A+V+ Y++PKG + PL HH+ E F
Sbjct: 314 DEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS--HHDEEAF 371
Query: 389 TDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
+P+ +DP R E F+ FG+GVH C G + A L++ + L T FR
Sbjct: 372 PNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQVKTI---LATAFR 418
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 29/232 (12%)
Query: 220 KALQARKRLNEILSDII--RERKE--KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG 275
+ +AR L +IL +II RE++E K + DLLG LL + +G +S ++ I+
Sbjct: 199 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 258
Query: 276 VLFAAQDTTASVMTW-IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ---PLSWTQTR 331
+FA Q T+ +W ++ +H ++ +K + KL++E ++ L++
Sbjct: 259 AMFAGQHTSTITTSWSMLHLMHPKN-----------KKWLDKLHKEIDEFPAQLNYDNVM 307
Query: 332 N-MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYF 388
+ MP + V ES+R + R A+V+ Y++PKG + PL HH+ E F
Sbjct: 308 DEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS--HHDEEAF 365
Query: 389 TDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
+P+ +DP R E F+ FG+GVH C G + A L++ + L T FR
Sbjct: 366 PNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQVKTI---LATAFR 412
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 29/232 (12%)
Query: 220 KALQARKRLNEILSDII--RERKE--KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG 275
+ +AR L +IL +II RE++E K + DLLG LL + +G +S ++ I+
Sbjct: 214 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 273
Query: 276 VLFAAQDTTASVMTW-IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ---PLSWTQTR 331
+FA Q T+ +W ++ +H ++ +K + KL++E ++ L++
Sbjct: 274 AMFAGQHTSTITTSWSMLHLMHPKN-----------KKWLDKLHKEIDEFPAQLNYDNVM 322
Query: 332 N-MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVL--PLFRNIHHNPEYF 388
+ MP + V ES+R + R A+V+ Y++PKG + PL HH+ E F
Sbjct: 323 DEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLS--HHDEEAF 380
Query: 389 TDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
+P+ +DP R E F+ FG+GVH C G + A L++ + L T FR
Sbjct: 381 PNPRLWDPERDEKVD--GAFIGFGAGVHKCIGQKFALLQVKTI---LATAFR 427
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 188/453 (41%), Gaps = 64/453 (14%)
Query: 32 KVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K KLPPG +P+IG LQ+ ++D + + YG +F ++ P V+L EA K
Sbjct: 8 KGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKE 67
Query: 92 VLVTQAHLF--KPTYPKSKERLIGPSAIFFHQGDYH-------LRLRKIVQGSLSLE--- 139
LV F + + P ++ G F + + + LR G S+E
Sbjct: 68 ALVDLGEEFAGRGSVPILEKVSKGLGIAFSNAKTWKEMRRFSLMTLRNFGMGKRSIEDRI 127
Query: 140 --AIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGT------LTIFGHLKDNY 191
R LV ++ + D +F +G ++ H + +Y
Sbjct: 128 QEEARCLVEELRKTNASPCDP----------------TFILGCAPCNVICSVIFHNRFDY 171
Query: 192 KGE--------LKKNYLIVD----KGYNSFSTNIPGTP--YKKALQARKRLNEILSDIIR 237
K E L +N ++ + YN+F + P +K L+ + + + ++
Sbjct: 172 KDEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVK 231
Query: 238 ERKE--KRLHEKDLLGC-LLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKY 294
E ++ + +D + C L+ + EN + + + + + A +TT++ + + +
Sbjct: 232 EHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLL 291
Query: 295 LHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTF 354
L E + Q+ I ++ P ++R MP T V+ E R ++
Sbjct: 292 LLKHPEVAARV-----QEEIERVIGRHRSPCMQDRSR-MPYTDAVIHEIQRFIDLLPTNL 345
Query: 355 REAVA-DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAP----KPNTFM 409
AV DV ++ Y IPKG ++ ++ H+ + F +P+ FDP F K + FM
Sbjct: 346 PHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDYFM 405
Query: 410 PFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
PF +G C G LA++E+ + + ++ F+ +
Sbjct: 406 PFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 183/450 (40%), Gaps = 39/450 (8%)
Query: 36 PPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVT 95
PPG P+IG LQ+ +D + K YG +F + P V+L EA K L+
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 96 QAHLF--KPTYPKSKERLIGPSAIFFHQGDYH-------LRLRKIVQGSLSL-----EAI 141
F + +P ++ G +F + + + LR G S+ E
Sbjct: 71 LGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEA 130
Query: 142 RELVTDIEAAAVAALD-----SWHGGHIINTFQEMKKLSF-EVGTLTIFGHLKDNYKGEL 195
R LV ++ + D ++I + K+ + + L + L +N + L
Sbjct: 131 RCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIE-IL 189
Query: 196 KKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEK--RLHEKDLLGCL 253
++ V + + PGT + K L+ + + + ++E +E + +D + C
Sbjct: 190 SSPWIQVYNNFPALLDYFPGT-HNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCF 248
Query: 254 L----NSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIA 309
L K + + + + + + A +TT++ + + + L E +
Sbjct: 249 LMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKV---- 304
Query: 310 EQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV-ADVEYKGYLI 368
Q+ I ++ P ++ +MP T VV E R ++ + AV D++++ YLI
Sbjct: 305 -QEEIERVIGRNRSPCMQDRS-HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLI 362
Query: 369 PKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCPGNELA 424
PKG +L ++ H+ + F +P+ FDP F K FMPF +G C G LA
Sbjct: 363 PKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALA 422
Query: 425 KLEMLVMIHHLVTKFRWEVIGSQSGIQYGP 454
+E+ + + ++ F + + + P
Sbjct: 423 GMELFLFLTSILQNFNLKSLVDPKNLDTTP 452
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 191/455 (41%), Gaps = 58/455 (12%)
Query: 34 KLPPGSMGWPLIGET--LQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKF 91
K P + PL+G L + N FF QK+YG I+ + V++ + AK
Sbjct: 8 KYPKSLLSLPLVGSLPFLPRHGHMHNNFFKL-QKKYGPIYSVRMGTKTTVIVGHHQLAKE 66
Query: 92 VLVTQAHLF--KPTYPKSKERLIGPSAIFFHQGDYHLRL-RKIVQGSLSL----EAIREL 144
VL+ + F +P I F H +L R++ + +L + E
Sbjct: 67 VLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEK 126
Query: 145 VTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELK--KNY--- 199
+ E + + + + H G I+ + V +L F N EL +NY
Sbjct: 127 IICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEG 186
Query: 200 LIVDKGYNSFSTNI------PGTPYKKALQARKRLNEILSDIIRERKEKRLHEK--DLLG 251
+I + +S + P +K K N++L+ I+ KEK + ++L
Sbjct: 187 IIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLD 246
Query: 252 CLLNSK----------DENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSET 301
L+ +K D++ E+LSD+ I I + A +TT SV+ W + +L
Sbjct: 247 TLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFL------ 300
Query: 302 SRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL------ESLRMASIISFTF- 354
+ + +KL EE +Q + +++T + +++L E LR+ +
Sbjct: 301 ------LHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIP 354
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF------EVAPKPNTF 408
+A D + + KG +V+ +HHN + + P +F P RF ++ ++
Sbjct: 355 HKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSY 414
Query: 409 MPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
+PFG+G SC G LA+ E+ +++ L+ +F EV
Sbjct: 415 LPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEYIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++I +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFIISMIRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D I+ II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K+ EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +V+ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 151/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +CPG + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 101 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 160
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 161 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 220
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 221 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 281 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 328
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
++ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 329 PTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 389 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L+
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLSG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 188/462 (40%), Gaps = 57/462 (12%)
Query: 16 LPLCMLFTRDKTEPRKKVKLPPGSMGWPLIGETLQLYSQ----DPNVFFAAKQKRYGEIF 71
+PLC L T +T + V PG WPL+G L+++ + + A K+YG+IF
Sbjct: 9 VPLCPLMTDGET---RNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIF 65
Query: 72 KTHILGCPCVMLASSEAAKFVLVTQ-AH----LFKP--TYPKSKERLIGPSAIFFHQGDY 124
+ + V L S + + T+ AH KP Y + G + +G
Sbjct: 66 RMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYG---LMILEGQE 122
Query: 125 HLRLRKIVQGSL----SLEAIRELVTDIEAAAVAALDSW--HGGHIINTFQEMKKLSFEV 178
R+R Q L + + + + ++ A + +D G I + + E+ K SFE
Sbjct: 123 WQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFES 182
Query: 179 GTLTI----FGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYK-------KALQARKR 227
L + FG L+ + E ++ K S + TP + K QA
Sbjct: 183 ICLVLYEKRFGLLQKETEEE-ALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTL 241
Query: 228 LNEILSDIIRERKEKRLHE------KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ 281
+ + ++ + RL D L C + +D LS ++ + + AA
Sbjct: 242 AWDTIFKSVKPCIDNRLQRYSQQPGADFL-CDIYQQDH----LSKKELYAAVTELQLAAV 296
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
+TTA+ + WI+ L + R + + E +++ NQ RNMP +
Sbjct: 297 ETTANSLMWILYNLSRNPQAQR--RLLQEVQSVLP----DNQTPRAEDLRNMPYLKACLK 350
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPE-YFTDPQKFDPSRF- 399
ES+R+ + FT R Y +PKG VL L + + E F D KF P R+
Sbjct: 351 ESMRLTPSVPFTTRTLDKPTVLGEYALPKG-TVLTLNTQVLGSSEDNFEDSHKFRPERWL 409
Query: 400 --EVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
E P +PFG G C G LA+L++ + + ++ K+
Sbjct: 410 QKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 451
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 193/457 (42%), Gaps = 46/457 (10%)
Query: 30 RKKVKLPPGSMGW-PLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEA 88
R++ PP G P +G LQ + +P F A Q+++G +F ++G + + +
Sbjct: 9 RRQTGEPPLENGLIPYLGCALQ-FGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLS 67
Query: 89 AKFVLVTQAHL-FKPTYPKSKERLIGPSAIFFHQGDYHLRLR----KIVQG----SLSLE 139
VL + +K + + + G +I G+ + K +QG SL+ E
Sbjct: 68 YHKVLCHGKYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLT-E 126
Query: 140 AIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH---LKDNYKGELK 196
++ E + I V++ + ++ FE G LTIFG +D K +
Sbjct: 127 SMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHIL 186
Query: 197 KN---YLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCL 253
N + DK + + +P ++ A AR++L E L E +KR +L+
Sbjct: 187 NNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HENLQKRESISELISLR 243
Query: 254 LNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAE--- 310
+ D D + A + VL+A+Q T W + + E + + +
Sbjct: 244 MFLND-TLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTL 302
Query: 311 QKAIRKLNEEGNQ-PLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVAD----VEYKG 365
+ A +K++ EGN LS + ++PV ++ ESLR++S S R A D +E
Sbjct: 303 ENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGS 361
Query: 366 YLIPKGWKVLPLFRNIHH-NPEYFTDPQKFDPSRF--EVAPKPNTF-----------MPF 411
Y I K ++ L+ + H +PE + DP F R+ E TF MPF
Sbjct: 362 YNIRKD-DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPF 420
Query: 412 GSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQS 448
GSG CPG A E+ + +++ F E+I Q+
Sbjct: 421 GSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 101 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 160
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 161 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 220
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 221 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 281 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 328
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 329 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 389 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/434 (21%), Positives = 173/434 (39%), Gaps = 60/434 (13%)
Query: 48 TLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQAHLF--KPTYP 105
+L S+ P+V+ + + YGEIF + G V+L + K LV Q+ +F +P P
Sbjct: 28 SLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87
Query: 106 --------------------KSKERLIGPSAIFFHQGDYHLRLRKIVQGSL---SLEAIR 142
RL S +F G + + + ++E +
Sbjct: 88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 143 ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIV 202
D + A+ + I N ++ ++E T F H+ + + ++
Sbjct: 148 GRPFDFKQLITNAVSN-----ITNLIIFGERFTYED---TDFQHMIELFSENVELAASAS 199
Query: 203 DKGYNSFS--TNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKD 258
YN+F +P +++ + + + LS +I + R + + + L+ D
Sbjct: 200 VFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMD 259
Query: 259 EN----GEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYL----HDQSETSRGSKGIAE 310
+ S + + ++ ++ A +TT +V+ W + ++ + Q +
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV--------- 310
Query: 311 QKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISF-TFREAVADVEYKGYLIP 369
QK I + +P SW MP T V+ E LR +I+ F D +GY IP
Sbjct: 311 QKEIDLIMGPNGKP-SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIP 369
Query: 370 KGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCPGNELAK 425
KG V+ ++H + +Y+ DP+ F P RF + K +PF G C G LA+
Sbjct: 370 KGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLAR 429
Query: 426 LEMLVMIHHLVTKF 439
+EM + L+ +F
Sbjct: 430 MEMFLFFTALLQRF 443
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 172/430 (40%), Gaps = 52/430 (12%)
Query: 48 TLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQAHLF--KPTYP 105
+L S+ P+V+ + + YGEIF + G V+L + K LV Q+ +F +P P
Sbjct: 28 SLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP 87
Query: 106 --------------------KSKERLIGPSAIFFHQGDYHLRLRKIVQGSL---SLEAIR 142
RL S +F G + + + ++E +
Sbjct: 88 LFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYK 147
Query: 143 ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIV 202
D + A+ + I N ++ ++E T F H+ + + ++
Sbjct: 148 GRPFDFKQLITNAVSN-----ITNLIIFGERFTYED---TDFQHMIELFSENVELAASAS 199
Query: 203 DKGYNSFS--TNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKD 258
YN+F +P +++ + + + LS +I + R + + + L+ D
Sbjct: 200 VFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMD 259
Query: 259 ENGEVLSDDKIADNII----GVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAI 314
+ S +N+I ++ A +TT +V+ W + ++ +G QK I
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFM----ALYPNIQGQV-QKEI 314
Query: 315 RKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISF-TFREAVADVEYKGYLIPKGWK 373
+ +P SW MP T V+ E LR +I+ F D +GY IPKG
Sbjct: 315 DLIMGPNGKP-SWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTT 373
Query: 374 VLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCPGNELAKLEML 429
V+ ++H + +Y+ DP+ F P RF + K +PF G C G LA++EM
Sbjct: 374 VITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMF 433
Query: 430 VMIHHLVTKF 439
+ L+ +F
Sbjct: 434 LFFTALLQRF 443
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 101 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 160
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 161 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 220
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 221 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 280
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 281 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 328
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 329 PTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 388
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 389 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A ++T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A ++T+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A ++T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ R I+ LS +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KARNILLPRLSQQAMKGYHAMMVDIAVQLVQKWERLNSDEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRINSFYRDQPHPFITSMVRALDEVMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +L+ KD E GE L D+ I II L A +TT+ ++T+ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRMA 347
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIW 326
Query: 348 SIISFTFREAVADVEYKG-YLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
A D G Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 104 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 163
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 164 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVD 223
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +L+ KD E GE L D+ I I+ L A +TT+ ++++ +
Sbjct: 224 KIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTL 283
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 284 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 331
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 332 PTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 391
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 392 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F P+G+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 192/457 (42%), Gaps = 46/457 (10%)
Query: 30 RKKVKLPPGSMGW-PLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASSEA 88
R++ PP G P +G LQ + +P F A Q+++G +F ++G + + +
Sbjct: 9 RRQTGEPPLENGLIPYLGCALQ-FGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLS 67
Query: 89 AKFVLVTQAHL-FKPTYPKSKERLIGPSAIFFHQGDYHLRLR----KIVQG----SLSLE 139
VL + +K + + G +I G+ + K +QG SL+ E
Sbjct: 68 YHKVLCHGKYFDWKKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLT-E 126
Query: 140 AIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGH---LKDNYKGELK 196
++ E + I V++ + ++ FE G LTIFG +D K +
Sbjct: 127 SMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDTQKAHIL 186
Query: 197 KN---YLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCL 253
N + DK + + +P ++ A AR++L E L E +KR +L+
Sbjct: 187 NNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLR---HENLQKRESISELISLR 243
Query: 254 LNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAE--- 310
+ D D + A + VL+A+Q T W + + E + + +
Sbjct: 244 MFLND-TLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTL 302
Query: 311 QKAIRKLNEEGNQ-PLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVAD----VEYKG 365
+ A +K++ EGN LS + ++PV ++ ESLR++S S R A D +E
Sbjct: 303 ENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGS 361
Query: 366 YLIPKGWKVLPLFRNIHH-NPEYFTDPQKFDPSRF--EVAPKPNTF-----------MPF 411
Y I K ++ L+ + H +PE + DP F R+ E TF MPF
Sbjct: 362 YNIRKD-DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPF 420
Query: 412 GSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQS 448
GSG CPG A E+ + +++ F E+I Q+
Sbjct: 421 GSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQA 457
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 150/339 (44%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F P+G+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F P G+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A +TT+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F P G+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 98 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVD 217
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 218 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 277
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S+ Q + + V+ E+LR+
Sbjct: 278 YFL------------VKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLW 325
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 326 PTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI 385
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 386 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 38/414 (9%)
Query: 65 KRYGEIFKTHILGCPCVMLASSEAAK-FVLVTQ----AHLFKPTYPKSKERLIGPSAIFF 119
K+YG + + ++ V++ S E+ K F++ T+ + +++ ERL G +
Sbjct: 21 KKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSE 80
Query: 120 HQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAA---VAALDSWHGGHIINTFQEM----- 171
+ + R+++ + S ++ L+ A V L++ G + Q+M
Sbjct: 81 CNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTA 140
Query: 172 ----KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGT--PYKKALQAR 225
K +F + T + G K + +K + N+ + +PG ++ ++
Sbjct: 141 MDILAKAAFGMETSMLLGAQKPLSQA-VKLMLEGITASRNTLAKFLPGKRKQLREVRESI 199
Query: 226 KRLNEILSDIIRERKE--KRLHE--KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ 281
+ L ++ D ++ R+E KR E D+L +L K E G D+ + DN + A
Sbjct: 200 RFLRQVGRDWVQRRREALKRGEEVPADILTQIL--KAEEG-AQDDEGLLDNFVTFFIAGH 256
Query: 282 DTTASVMTWIVKYLHDQSE-TSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVV 340
+T+A+ + + V L Q E +R + E ++ L + + +V+
Sbjct: 257 ETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY-------LDFEDLGRLQYLSQVL 309
Query: 341 LESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRF- 399
ESLR+ TFR + G +P +L + YF DP F+P RF
Sbjct: 310 KESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFG 369
Query: 400 EVAPKPN-TFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVI-GSQSGIQ 451
APKP T+ PF G SC G + A++E+ V++ L+ + + ++ G + G+Q
Sbjct: 370 PGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQ 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 35/339 (10%)
Query: 127 RLRKIVQGSLSLEAIR---ELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTI 183
+ I+ S S +A++ ++ DI V + + I ++M +L+ + L
Sbjct: 99 KAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 158
Query: 184 FGHLKDNYKGELKKNYLI-----VDKGYNSFSTNIPGTPY----KKALQAR-KRLNEILS 233
F + +++ + ++ +D+ N P P K+ Q K +N+++
Sbjct: 159 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVD 218
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKD-ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIV 292
II +RK DLL +LN KD E GE L D+ I II L A + T+ ++++ +
Sbjct: 219 KIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFAL 278
Query: 293 KYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPL-----SWTQTRNMPVTYKVVLESLRM- 346
+L + ++K EE + L S Q + + V+ E+LR+
Sbjct: 279 YFL------------VKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLW 326
Query: 347 ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP-QKFDPSRFE--VAP 403
+ +F+ V Y + KG +++ L +H + + D ++F P RFE A
Sbjct: 327 PTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAI 386
Query: 404 KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWE 442
+ F PFG+G +C G + A E +++ ++ F +E
Sbjct: 387 PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 185/451 (41%), Gaps = 67/451 (14%)
Query: 60 FAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQAH--LFKPTYPKSKERLIGPSAI 117
F ++R+G++F + P V+L A + LVT +P P ++ GP +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS- 94
Query: 118 FFHQGDYHLR---------------LRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGG 162
QG + R LR + G SLE + VT+ EAA + A + H G
Sbjct: 95 ---QGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLE---QWVTE-EAACLCAAFANHSG 147
Query: 163 HIINTFQEMKK-LSFEVGTLTI----------FGHLKDNYKGELKKNYLIVDKGYNSFST 211
+ K +S + +LT F L D + LK+ + + N+
Sbjct: 148 RPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 212 N--IPGTPYKKALQARKRLNEILSDIIRERK---EKRLHEKDLLGCLLNSKDE---NGEV 263
+ IP K L+ +K L +++ E + + +DL L ++ N E
Sbjct: 208 DRHIPAL-AGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPES 266
Query: 264 LSDDKIADNIIGVLFAA-QDTTASVMTW--IVKYLHDQSETSRGSKGIAEQKAIRKLNEE 320
+D+ ++ LF+A TT++ + W ++ LH + R + I + + E
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQ-RRVQQEIDDVIGQVRRPEM 325
Query: 321 GNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVA-DVEYKGYLIPKGWKVLPLFR 379
G+Q +MP T V+ E R I+ + D+E +G+ IPKG ++
Sbjct: 326 GDQA-------HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLS 378
Query: 380 NIHHNPEYFTDPQKFDPSRFEVAP----KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHL 435
++ + + P +F P F A KP F+PF +G +C G LA++E+ + L
Sbjct: 379 SVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSL 438
Query: 436 VTKFRWEV-IGSQSGIQYGPF-----PIPYQ 460
+ F + V G +G F P PY+
Sbjct: 439 LQHFSFSVPTGQPRPSHHGVFAFLVSPSPYE 469
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 33/258 (12%)
Query: 215 GTPYKKALQARKRLNEILSDIIRERK----EKRLHEKDLLGCLLNSKDENGEVLSDDKIA 270
P + A +A +R +E ++ ++R KD + LL + +G + D I
Sbjct: 199 AAPRQSADEAARRFHETIATFYDYFNGFTVDRRSCPKDDVMSLLANSKLDGNYIDDKYIN 258
Query: 271 DNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQT 330
+ + A DTT+S S G I + +L + P
Sbjct: 259 AYYVAIATAGHDTTSS---------------SSGGAIIGLSRNPEQLALAKSDPA----- 298
Query: 331 RNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTD 390
+ ++V E++R + + R A+AD E +G I +G +++ + + + + E F++
Sbjct: 299 ----LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSN 354
Query: 391 PQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGI 450
P +FD +RF PN + FG G H C G LAKLEM + L+ K + + +
Sbjct: 355 PDEFDITRF-----PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPRL 409
Query: 451 QYGPFPIPYQGFPARFSK 468
F + P RF+K
Sbjct: 410 VATNFVGGPKNVPIRFTK 427
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 185/451 (41%), Gaps = 67/451 (14%)
Query: 60 FAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQAH--LFKPTYPKSKERLIGPSAI 117
F ++R+G++F + P V+L A + LVT +P P ++ GP +
Sbjct: 36 FDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRS- 94
Query: 118 FFHQGDYHLR---------------LRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGG 162
QG + R LR + G SLE + VT+ EAA + A + H G
Sbjct: 95 ---QGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLE---QWVTE-EAACLCAAFANHSG 147
Query: 163 HIINTFQEMKK-LSFEVGTLTI----------FGHLKDNYKGELKKNYLIVDKGYNSFST 211
+ K +S + +LT F L D + LK+ + + N+
Sbjct: 148 RPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPV 207
Query: 212 --NIPGTPYKKALQARKRLNEILSDIIRERK---EKRLHEKDLLGCLLNSKDE---NGEV 263
+IP K L+ +K L +++ E + + +DL L ++ N E
Sbjct: 208 LLHIPAL-AGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPES 266
Query: 264 LSDDKIADNIIGVLFAA-QDTTASVMTW--IVKYLHDQSETSRGSKGIAEQKAIRKLNEE 320
+D+ ++ LF+A TT++ + W ++ LH + R + I + + E
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQ-RRVQQEIDDVIGQVRRPEM 325
Query: 321 GNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVA-DVEYKGYLIPKGWKVLPLFR 379
G+Q +MP T V+ E R I+ + D+E +G+ IPKG ++
Sbjct: 326 GDQA-------HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLS 378
Query: 380 NIHHNPEYFTDPQKFDPSRFEVAP----KPNTFMPFGSGVHSCPGNELAKLEMLVMIHHL 435
++ + + P +F P F A KP F+PF +G +C G LA++E+ + L
Sbjct: 379 SVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSL 438
Query: 436 VTKFRWEV-IGSQSGIQYGPF-----PIPYQ 460
+ F + V G +G F P PY+
Sbjct: 439 LQHFSFSVPTGQPRPSHHGVFAFLVSPSPYE 469
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 139/351 (39%), Gaps = 46/351 (13%)
Query: 94 VTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAV 153
+ Q L T P+ + GP++ F H RLR +V + + I+ L +I A
Sbjct: 78 IFQRQLAAETQPRPQ----GPASFLFLDPPDHTRLRGLVSKAFAPRVIKRLEPEITALVD 133
Query: 154 AALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHL----KDNYKGELKKNYLIVDKGYNSF 209
LD+ G F + L++ + I L +D K L
Sbjct: 134 QLLDAVDGPE----FNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALLAAALDPFLA 189
Query: 210 STNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKI 269
T + + ++A L + L +I ER+ R +DL+ L+ + +E+G+ L++D+I
Sbjct: 190 LTGETSDLFDEQMKAGMWLRDYLRALIDERR--RTPGEDLMSGLV-AVEESGDQLTEDEI 246
Query: 270 ADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGN-QPLSWT 328
+L A +TT +++ A+ L G L+
Sbjct: 247 IATCNLLLIAGHETTVNLIA---------------------NAALAMLRTPGQWAALAAD 285
Query: 329 QTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYF 388
+R V+ E++R + R A D+ + +PKG +L L H +P
Sbjct: 286 GSR----ASAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV 341
Query: 389 TDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
P +FDP R ++ + FG G H C G LA+LE V + L +F
Sbjct: 342 GAPDRFDPDRAQI-----RHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 176/434 (40%), Gaps = 85/434 (19%)
Query: 60 FAAKQKRYGEIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYPKSKERLIGP----S 115
F +++YG++F H+ P VML EA + LV +A F + K ++ P
Sbjct: 36 FLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSG---RGKIAMVDPFFRGY 92
Query: 116 AIFFHQGDYHLRLRKIV--------QGSLSLEA-IRE----LVTDIEAAAVAALDSWH-- 160
+ F G+ LR+ G S+E I+E L+ ++ + A +D
Sbjct: 93 GVIFANGNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLF 152
Query: 161 ---GGHIINT-------------FQEMKKLSFEVGTL--TIFGHLKDNYKGELKKNYLIV 202
+II + F +M L ++ +L ++FG L + + G LK
Sbjct: 153 QSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLK------ 206
Query: 203 DKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKR--LHEKDLLGC-LLNSKDE 259
+ PG +++ + + +N + + + +E +DL+ LL+ + E
Sbjct: 207 ---------HFPGA-HRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKE 256
Query: 260 NGEV---LSDDKIADNIIGVLFAAQDTTASVMTW----IVKYLHDQSETSRGSKGIAEQK 312
S + N + + FA +TT++ + + ++KY H +AE +
Sbjct: 257 KSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPH-----------VAE-R 304
Query: 313 AIRKLNE--EGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVAD-VEYKGYLIP 369
R++ + ++P MP T V+ E R + ++ V ++GY+IP
Sbjct: 305 VYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIP 364
Query: 370 KGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA----PKPNTFMPFGSGVHSCPGNELAK 425
K +V + H+P YF P F+P F A K F+PF G C G +A+
Sbjct: 365 KDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIAR 424
Query: 426 LEMLVMIHHLVTKF 439
E+ + ++ F
Sbjct: 425 AELFLFFTTILQNF 438
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 50/322 (15%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGT---- 180
HL RK+V + R+ V D EA+ A D+ +I+ E + F
Sbjct: 83 HLLRRKLVNAGFT----RKRVKDKEASIAALCDT-----LIDAVCERGECDFVRDLAAPL 133
Query: 181 -LTIFGHLKDNYKGELKKNYLIVDKGYNSF-STNIPGTPYKKALQARKRLNEILSDIIRE 238
+ + G + + E + +L +F S+++ ++ + A N+ I
Sbjct: 134 PMAVIGDML-GVRPEQRDMFLRWSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIAA 192
Query: 239 RKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQ 298
R R D L +L S + +GE LSDD++ + +L +TT ++
Sbjct: 193 R---RADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLS--------- 240
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMP-VTYKVVLESLRMASIISFTFREA 357
G EQ +R ++ W + P + + E LR + + R
Sbjct: 241 --------GGTEQ-LLRNRDQ-------WDLLQRDPSLLPGAIEEMLRWTAPVKNMCRVL 284
Query: 358 VADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHS 417
AD E+ G + G K++ LF + + + F +P+KFD R PN+ + FG G H
Sbjct: 285 TADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR-----NPNSHLAFGFGTHF 339
Query: 418 CPGNELAKLEMLVMIHHLVTKF 439
C GN+LA+LE+ +M ++ +
Sbjct: 340 CLGNQLARLELSLMTERVLRRL 361
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 189/470 (40%), Gaps = 82/470 (17%)
Query: 29 PRKKVKLP-PGSMGWPLIGETLQLY-------SQDPNVFFAAKQKRYGEIFKTHILGCPC 80
PR ++P PG GW L LY + ++ ++YG I++ +
Sbjct: 2 PRPFNEIPSPGDNGW------LNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVES 55
Query: 81 VMLASSEAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLR-----LRK----- 130
V + E A LFK P + ER + P + +HQ Y+ R L+K
Sbjct: 56 VYVIDPEDV-------ALLFKSEGP-NPERFLIPPWVAYHQ--YYQRPIGVLLKKSAAWK 105
Query: 131 -----IVQGSLSLEAIRELVTDIEAAAVAALDSWH--------GGHIINTFQEMKKLSFE 177
+ Q ++ EA + + ++A + + H G + + ++ + +FE
Sbjct: 106 KDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFE 165
Query: 178 VGTLTIFGH----LKDNYKGELKKNYLIVDKGYNSFSTNIP-------------GTPYKK 220
T IFG L++ E ++ +D Y F T++P +K
Sbjct: 166 SITNVIFGERQGMLEEVVNPEAQR---FIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD 222
Query: 221 ALQAR----KRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGV 276
+ A + + + E ++K D G L ++ +S + I N+ +
Sbjct: 223 HVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSK--MSFEDIKANVTEM 280
Query: 277 LFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVT 336
L DTT+ + W +L++ + + + + + +G+ T + +P+
Sbjct: 281 LAGGVDTTSMTLQW---HLYEMARNLKVQDMLRAEVLAARHQAQGDMA---TMLQLVPLL 334
Query: 337 YKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDP 396
+ E+LR+ I R V D+ + Y+IP V + P +F DP+ FDP
Sbjct: 335 KASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 394
Query: 397 SRFEVAPKPNTF---MPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
+R+ K T+ + FG GV C G +A+LEM + + +++ FR E+
Sbjct: 395 TRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 444
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 186/470 (39%), Gaps = 83/470 (17%)
Query: 29 PRKKVKLP-PGSMGWPLIGETLQLY-------SQDPNVFFAAKQKRYGEIFKTHILGCPC 80
PR ++P PG GW L LY SQ + ++YG I++ +
Sbjct: 7 PRPYSEIPSPGDNGW------LNLYHFWREKGSQRIHFRHIENFQKYGPIYREKLGNLES 60
Query: 81 VMLASSEAAKFVLVTQAHLFK-----------PTYPKSKERLIGPSAIFFHQGDYHLRLR 129
V + E AHLFK P + P + F + + R
Sbjct: 61 VYIIHPEDV-------AHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFKKSGTWKKDR 113
Query: 130 KIVQGS-LSLEAIRELVTDIEAAAVAALDSWH--------GGHIINTFQEMKKLSFEVGT 180
++ ++ EAI+ + + + + H G + + +++ +FE T
Sbjct: 114 VVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFESIT 173
Query: 181 LTIFGH----LKDNYKGELKKNYLIVDKGYNSFSTNIP--GTP----------------- 217
+FG L++ E +K +D Y F T++P P
Sbjct: 174 NVMFGERLGMLEETVNPEAQK---FIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVA 230
Query: 218 -YKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGV 276
+ ++ EI +R + E R + +L CLL S+ ++L +D + NI +
Sbjct: 231 AWDTIFNKAEKYTEIFYQDLRRKTEFR-NYPGILYCLLKSE----KMLLED-VKANITEM 284
Query: 277 LFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVT 336
L +TT+ + W +L++ + + + + E+ + EG+ + +P+
Sbjct: 285 LAGGVNTTSMTLQW---HLYEMARSLNVQEMLREEVLNARRQAEGDIS---KMLQMVPLL 338
Query: 337 YKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDP 396
+ E+LR+ I R +D+ + YLIP V + +P +F+ P KFDP
Sbjct: 339 KASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDP 398
Query: 397 SRFEVAPKPNTF---MPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
+R+ K + FG GV C G +A+LEM + + H++ F+ E+
Sbjct: 399 TRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEM 448
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 125/321 (38%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIF 184
H RLRK+V ++ + + +E LD +++ + +
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 185 GHLKDNYKGELKK---NYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + Y+GE + L++D P ++ AR+ +N IL + R R E
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 206
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L+ +D++ LS D++ + +L A +T+ S++ T+++ DQ
Sbjct: 207 P---GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTHPDQ 263
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R R+ V E LR + T R A
Sbjct: 264 LALVR---------------------------RDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P+ F DP +FD +R + FG G+H C
Sbjct: 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 351
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 352 MGRPLAKLEGEVALRALFGRF 372
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 189/470 (40%), Gaps = 82/470 (17%)
Query: 29 PRKKVKLP-PGSMGWPLIGETLQLY-------SQDPNVFFAAKQKRYGEIFKTHILGCPC 80
PR ++P PG GW L LY + ++ ++YG I++ +
Sbjct: 5 PRPFNEIPSPGDNGW------LNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVES 58
Query: 81 VMLASSEAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLR-----LRK----- 130
V + E A LFK P + ER + P + +HQ Y+ R L+K
Sbjct: 59 VYVIDPEDV-------ALLFKSEGP-NPERFLIPPWVAYHQ--YYQRPIGVLLKKSAAWK 108
Query: 131 -----IVQGSLSLEAIRELVTDIEAAAVAALDSWH--------GGHIINTFQEMKKLSFE 177
+ Q ++ EA + + ++A + + H G + + ++ + +FE
Sbjct: 109 KDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFE 168
Query: 178 VGTLTIFGH----LKDNYKGELKKNYLIVDKGYNSFSTNIP-------------GTPYKK 220
T IFG L++ E ++ +D Y F T++P +K
Sbjct: 169 SITNVIFGERQGMLEEVVNPEAQR---FIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD 225
Query: 221 ALQAR----KRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGV 276
+ A + + + E ++K D G L ++ +S + I N+ +
Sbjct: 226 HVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGDSK--MSFEDIKANVTEM 283
Query: 277 LFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVT 336
L DTT+ + W +L++ + + + + + +G+ T + +P+
Sbjct: 284 LAGGVDTTSMTLQW---HLYEMARNLKVQDMLRAEVLAARHQAQGDMA---TMLQLVPLL 337
Query: 337 YKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDP 396
+ E+LR+ I R V D+ + Y+IP V + P +F DP+ FDP
Sbjct: 338 KASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDP 397
Query: 397 SRFEVAPKPNTF---MPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEV 443
+R+ K T+ + FG GV C G +A+LEM + + +++ FR E+
Sbjct: 398 TRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEI 447
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIF 184
H RLRK+V ++ + + +E LD +++ + +
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 155
Query: 185 GHLKDNYKGELKK---NYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + Y+GE + L++D P ++ AR+ +N IL + R R E
Sbjct: 156 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 205
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L+ +D++ LS D++ + +L A +++ S++ T+++ DQ
Sbjct: 206 P---GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQ 262
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R R+ V E LR + T R A
Sbjct: 263 LALVR---------------------------RDPSALPNAVEEILRYIAPPETTTRFAA 295
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P+ F DP +FD +R + FG G+H C
Sbjct: 296 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 350
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 351 MGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIF 184
H RLRK+V ++ + + +E LD +++ + +
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 185 GHLKDNYKGELKK---NYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + Y+GE + L++D P ++ AR+ +N IL + R R E
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 206
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L+ +D++ LS D++ + +L A +++ S++ T+++ DQ
Sbjct: 207 P---GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTHPDQ 263
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R R+ V E LR + T R A
Sbjct: 264 LALVR---------------------------RDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P+ F DP +FD +R + FG G+H C
Sbjct: 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 351
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 352 MGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 124/321 (38%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIF 184
H RLRK+V ++ + + +E LD +++ + +
Sbjct: 98 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 156
Query: 185 GHLKDNYKGELKK---NYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + Y+GE + L++D P ++ AR+ +N IL + R R E
Sbjct: 157 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 206
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L+ +D++ LS D++ + +L A + + S++ T+++ DQ
Sbjct: 207 P---GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 263
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R R+ V E LR + T R A
Sbjct: 264 LALVR---------------------------RDPSALPNAVEEILRYIAPPETTTRFAA 296
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P+ F DP +FD +R + FG G+H C
Sbjct: 297 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 351
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 352 MGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 124/321 (38%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIF 184
H RLRK+V ++ + + +E LD +++ + +
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAH-PLPIKVICEL 155
Query: 185 GHLKDNYKGELKK---NYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + Y+GE + L++D P ++ AR+ +N IL + R R E
Sbjct: 156 LGVDEKYRGEFGRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 205
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L+ +D++ LS D++ + +L A + + S++ T+++ DQ
Sbjct: 206 P---GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 262
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R R+ V E LR + T R A
Sbjct: 263 LALVR---------------------------RDPSALPNAVEEILRYIAPPETTTRFAA 295
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P+ F DP +FD +R + FG G+H C
Sbjct: 296 EEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 350
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 351 MGRPLAKLEGEVALRALFGRF 371
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 37/219 (16%)
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAA 280
A+QA E++ +K KR ++D++ LL ++++ L++++ A I + A
Sbjct: 184 AVQAMAYFKELI------QKRKRHPQQDMISMLLKGREKDK--LTEEEAASTCILLAIAG 235
Query: 281 QDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVV 340
+TT ++++ V L E + KL E N + V
Sbjct: 236 HETTVNLISNSVLCLLQHPEQ------------LLKLRE------------NPDLIGTAV 271
Query: 341 LESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S T R A D++ G I +G +V L + +P FT+P FD +R
Sbjct: 272 EECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR-- 329
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
PN + FG G H C G+ LA+LE + I+ L+ +
Sbjct: 330 ---SPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRM 365
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 119/300 (39%), Gaps = 25/300 (8%)
Query: 160 HGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNI------ 213
G + +E L+ + FG+ +D + K ++ +S I
Sbjct: 154 QAGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPF 213
Query: 214 ----PGTPYKKALQARKRLNEILSDIIRERKE-------KRLHEKDLLGCLLNSKDENGE 262
P + QA + + ++ +R KE + + + L G +E
Sbjct: 214 LRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPG 273
Query: 263 VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGN 322
L + + +++ + +TTAS ++W V +L E R +++ R+L +
Sbjct: 274 QLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRR----LQEELDRELGPGAS 329
Query: 323 -QPLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRN 380
+++ +P+ + E LR+ ++ GY IP+G V+P +
Sbjct: 330 CSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQG 389
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPN-TFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
H + + P +F P RF + P N + + FG G C G LA+LE+ V++ L+ F
Sbjct: 390 AHLDETVWEQPHEFRPDRF-LEPGANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 224 ARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG-VLFAAQD 282
A RL +L +++ER+ DL+ L+ ++D +G V DD N G +L AA D
Sbjct: 185 AGMRLGGLLYQLVQERRAN--PGDDLISALITTEDPDGVV--DDMFLMNAAGTLLIAAHD 240
Query: 283 TTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLE 342
TTA ++ L D + Q A+ L E+ + + V E
Sbjct: 241 TTACMIGLGTALLLDSPD----------QLAL--LREDPS------------LVGNAVEE 276
Query: 343 SLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
LR +I F R A DVE G I KG +V+ +P + +P++FD +R
Sbjct: 277 LLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR--- 333
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+P + FG G H C G +LA++E+ ++ L +
Sbjct: 334 --RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE-KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ 281
QA+ + E+ + R KR + +DLL L+ + DE+G L+ +++ +L A
Sbjct: 206 QAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
+TT +++ + L + + A+R +M + V
Sbjct: 266 ETTVNLIANGMYALLSHPD---------QLAALRA---------------DMTLLDGAVE 301
Query: 342 ESLRM-ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR + S T+R V V+ G +IP G VL + + H PE F DP +FD R
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
+ FG G+H C G LA+LE + + L+ +
Sbjct: 362 AG-----HLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE-KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ 281
QA+ + E+ + R KR + +DLL L+ + DE+G L+ +++ +L A
Sbjct: 206 QAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
+TT +++ + L + + A+R +M + V
Sbjct: 266 ETTVNLIANGMYALLSHPD---------QLAALRA---------------DMTLLDGAVE 301
Query: 342 ESLRM-ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR + S T+R V V+ G +IP G VL + + H PE F DP +FD R
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
+ FG G+H C G LA+LE + + L+ +
Sbjct: 362 AG-----HLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 224 ARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG-VLFAAQD 282
A RL +L +++ER+ DL+ L+ ++D +G V DD N G +L AA D
Sbjct: 185 AGMRLGGLLYQLVQERRAN--PGDDLISALITTEDPDGVV--DDMFLMNAAGTLLIAAHD 240
Query: 283 TTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLE 342
TTA ++ L D + Q A+ L E+ + + V E
Sbjct: 241 TTACMIGLGTALLLDSPD----------QLAL--LREDPS------------LVGNAVEE 276
Query: 343 SLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
LR +I F R A DVE G I KG +V+ +P + +P++FD +R
Sbjct: 277 LLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR--- 333
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+P + FG G H C G +LA++E+ ++ L +
Sbjct: 334 --RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 223 QARKRLNEILSDIIRERKEKRLHE-KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ 281
QA+ + E+ + R KR + +DLL L+ + DE+G L+ +++ +L A
Sbjct: 206 QAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGH 265
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
+TT +++ + L + + A+R +M + V
Sbjct: 266 ETTVNLIANGMYALLSHPD---------QLAALRA---------------DMTLLDGAVE 301
Query: 342 ESLRM-ASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR + S T+R V V+ G +IP G VL + + H PE F DP +FD R
Sbjct: 302 EMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
+ FG G+H C G LA+LE + + L+ +
Sbjct: 362 AG-----HLAFGHGIHFCIGAPLARLEARIAVRALLER 394
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 224 ARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIG-VLFAAQD 282
A RL +L +++ER+ DL+ L+ ++D +G V DD N G +L AA D
Sbjct: 185 AGMRLGGLLYQLVQERRAN--PGDDLISALITTEDPDGVV--DDMFLMNAAGTLLIAAHD 240
Query: 283 TTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLE 342
TTA ++ L D + Q A+ L E+ + + V E
Sbjct: 241 TTACMIGLGTALLLDSPD----------QLAL--LREDPS------------LVGNAVEE 276
Query: 343 SLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
LR +I F R A DVE G I KG +V+ +P + +P++FD +R
Sbjct: 277 LLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR--- 333
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+P + FG G H C G +LA++E+ ++ L +
Sbjct: 334 --RPAPHLAFGFGAHQCIGQQLARIELQIVFETLFRRL 369
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
MP +L L +A S R A D+E G +P V+ L +H+PE F DP+
Sbjct: 282 MPAAVDELLRVLSVAD--SIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 393 KFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ D R + N + FG GVH C G LA+LE+ V + L+ +
Sbjct: 340 RVDFHRTD-----NHHVAFGYGVHQCVGQHLARLELEVALETLLRRV 381
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 209 FSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDK 268
S+++ +K + E D+I +R+ + DL L+NS+ E G+ +SDD+
Sbjct: 166 LSSHVDEAAIQKLMDTFAAYTEFTKDVITKRRAE--PTDDLFSVLVNSEVE-GQRMSDDE 222
Query: 269 IADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWT 328
I + +L +TT ++ G EQ +R ++ W
Sbjct: 223 IVFETLLILIGGDETTRHTLS-----------------GGTEQ-LLRHRDQ-------WD 257
Query: 329 Q-TRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEY 387
++ + + E LR S + R AD + G + G K++ +F + + +
Sbjct: 258 ALVADVDLLPGAIEEMLRWTSPVKNMCRTLTADTVFHGTELRAGEKIMLMFESANFDESV 317
Query: 388 FTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
F DP F R PN+ + FG G H C GN+LA+LE+ +M ++ +
Sbjct: 318 FGDPDNFRIDR-----NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRL 364
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 141/330 (42%), Gaps = 48/330 (14%)
Query: 117 IFFHQGDYHLRLRKIVQGSLS---LEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKK 173
+F G H +LR++V + S ++A+R V + V L G ++ QE
Sbjct: 87 MFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQE--- 143
Query: 174 LSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILS 233
L++ + + + GHL + +VD F T + +A RL E+L
Sbjct: 144 LAYPL-PIAVIGHLMGVPQDRRDGFRALVD---GVFDTTLD---QAEAQANTARLYEVLD 196
Query: 234 DIIRERKEKRLHEKDLLGCLLNSKDE--NGEVLSDDKIADNIIGVLFAAQDTTASVMTWI 291
+I ++ D+ L+ ++D+ +G+ LS +++ D ++ ++ A +TT +V+
Sbjct: 197 QLIAAKRATP--GDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQA 254
Query: 292 VKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIIS 351
V L + + Q A+ + E ++W VV E+LR +
Sbjct: 255 VHTLLTRPD----------QLALVRKGE-----VTWAD---------VVEETLRHEPAVK 290
Query: 352 -FTFREAVADVEY-KGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFM 409
R AV D+ G I +G +L + + +P++ D FD +R +
Sbjct: 291 HLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATR-----TVKEHL 345
Query: 410 PFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
FG GVH C G LA++E+ + + L +F
Sbjct: 346 AFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 127/321 (39%), Gaps = 52/321 (16%)
Query: 125 HLRLRKIVQGSLS---LEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTL 181
H RLRK+V + +EA+R V I A + + I++ F + L
Sbjct: 97 HTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELL 156
Query: 182 TIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
+ + + G L++D P ++ AR+ +N IL + R R E
Sbjct: 157 GVDEAARGAF-GRWSSEILVMD----------PERAEQRGQAAREVVNFILDLVERRRTE 205
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVM---TWIVKYLHDQ 298
DLL L++ +D++ LS D++ + +L A + + S++ T+++ DQ
Sbjct: 206 P---GDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQ 262
Query: 299 SETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAV 358
R A+ A+ E E LR + T R A
Sbjct: 263 LALVR-----ADPSALPNAVE----------------------EILRYIAPPETTTRFAA 295
Query: 359 ADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSC 418
+VE G IP+ VL + +P F DP +FD +R + FG G+H C
Sbjct: 296 EEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR-----DTRGHLSFGQGIHFC 350
Query: 419 PGNELAKLEMLVMIHHLVTKF 439
G LAKLE V + L +F
Sbjct: 351 MGRPLAKLEGEVALRALFGRF 371
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 29/198 (14%)
Query: 241 EKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSE 300
E+R + D + ++ + +GE +SD A I A DTT++
Sbjct: 251 ERRRNPTDDVATVIANAVVDGEPMSDRDTAGYYIITASAGHDTTSASSA------GAALA 304
Query: 301 TSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVAD 360
+R A KA R L +P +V E++R + + R A D
Sbjct: 305 LARDPDLFARVKADRNL---------------LP---GIVEEAIRWTTPVQHFMRTAATD 346
Query: 361 VEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPG 420
E G I G ++ + +H+P F +P+KFDP+R N + FG+G H C G
Sbjct: 347 TELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTR-----PANRHLAFGAGSHQCLG 401
Query: 421 NELAKLEMLVMIHHLVTK 438
LA+LEM V++ L+ +
Sbjct: 402 LHLARLEMRVLLDVLLDR 419
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 213 IPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADN 272
+ T + AL AR L L +I + + + L+G L+ + NGE+ ++ I+
Sbjct: 181 VQSTDAQSALTARNDLAGYLDGLITQFQTE--PGAGLVGALVADQLANGEIDREELISTA 238
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN 332
++ +L A +TTAS+ + V L D E A +A R L
Sbjct: 239 ML-LLIAGHETTASMTSLSVITLLDHPEQ------YAALRADRSL--------------- 276
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
+P + +L L +A I R A AD+E +G LI G V+ + + + + DP
Sbjct: 277 VPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD 334
Query: 393 KFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
D R + FG GVH C G LA+LE+ V+++ L+ +
Sbjct: 335 ALDIHR-----SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 213 IPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADN 272
+ T + AL AR L L +I + + + L+G L+ + NGE+ ++ I+
Sbjct: 181 VQSTDAQSALTARNDLAGYLDGLITQFQTE--PGAGLVGALVADQLANGEIDREELISTA 238
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN 332
++ +L A +TTAS+ + V L D E A +A R L
Sbjct: 239 ML-LLIAGHETTASMTSLSVITLLDHPEQ------YAALRADRSL--------------- 276
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
+P + +L L +A I R A AD+E +G LI G V+ + + + + DP
Sbjct: 277 VPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD 334
Query: 393 KFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
D R + FG GVH C G LA+LE+ V+++ L+ +
Sbjct: 335 ALDIHR-----SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 164/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 4 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 62
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L+G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 63 VAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 122
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 123 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 175
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 176 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 232
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
+ T ++ +I H S + +Q +L
Sbjct: 233 ---EPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 268
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 213 IPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADN 272
+ T + AL AR L L +I + + + L+G L+ + NGE+ ++ I+
Sbjct: 181 VQSTDAQSALTARNDLAGYLDGLITQFQTE--PGAGLVGALVADQLANGEIDREELISTA 238
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN 332
++ +L A +TTAS+ + V L D E A +A R L
Sbjct: 239 ML-LLIAGHETTASMTSLSVITLLDHPEQ------YAALRADRSL--------------- 276
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
+P + +L L +A I R A AD+E +G LI G V+ + + + + DP
Sbjct: 277 VPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD 334
Query: 393 KFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
D R + FG GVH C G LA+LE+ V+++ L+ +
Sbjct: 335 ALDIHR-----SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 100/226 (44%), Gaps = 31/226 (13%)
Query: 213 IPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADN 272
+ T + AL AR L L +I + + + L+G L+ + NGE+ ++ I+
Sbjct: 181 VQSTDAQSALTARNDLAGYLDGLITQFQTE--PGAGLVGALVADQLANGEIDREELISTA 238
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRN 332
++ +L A +TTAS+ + V L D E A +A R L
Sbjct: 239 ML-LLIAGHETTASMTSLSVITLLDHPEQ------YAALRADRSL--------------- 276
Query: 333 MPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQ 392
+P + +L L +A I R A AD+E +G LI G V+ + + + + DP
Sbjct: 277 VPGAVEELLRYLAIADIAGG--RVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPD 334
Query: 393 KFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
D R + FG GVH C G LA+LE+ V+++ L+ +
Sbjct: 335 ALDIHR-----SARHHLAFGFGVHQCLGQNLARLELEVILNALMDR 375
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
VV E LR S R ADV G +P G V+ + +P F DP F P R
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
Query: 399 FEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFPIP 458
KPN + FG G+H C G+ LA++E+ V++ L + + +
Sbjct: 350 -----KPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREPAWLRAIVVQG 404
Query: 459 YQGFPARFS 467
Y+ P RF+
Sbjct: 405 YRELPVRFT 413
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 29/175 (16%)
Query: 272 NIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTR 331
N++ ++ DTT + MT V LH + A+ KA
Sbjct: 258 NVLLLIVGGNDTTRNSMTGGVLALHKNPDQ------FAKLKA------------------ 293
Query: 332 NMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP 391
N + +V E +R + ++ R A+AD E G I KG KV+ + + + + E P
Sbjct: 294 NPALVETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRP 353
Query: 392 QKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF-RWEVIG 445
++F R P+P + FG G+H C GN LA++++ ++ ++T+F R EV+
Sbjct: 354 EEFIIDR----PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMA 404
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 163/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 12 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 70
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L+G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 71 VAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 130
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 131 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 183
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 184 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 240
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
T ++ +I H S + +Q +L
Sbjct: 241 ---RPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 276
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 277 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 52/327 (15%)
Query: 114 PSAIFFHQGDYHLRLRKIVQGSLSLEAIREL---VTDIEAAAVAALDSWHGGHIINTFQE 170
P I D H RLRK+V S ++ + EL +T+I +A L +
Sbjct: 85 PMMILMDPPD-HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPT------DGPVDL 137
Query: 171 MKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNE 230
M++ +F++ I L E + ++ ++S + +P A +L+
Sbjct: 138 MREYAFQIPVQVICELL--GVPAEDRDDF----SAWSSVLVD--DSPADDKNAAMGKLHG 189
Query: 231 ILSDII-RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
LSD++ R+R E + LL LL DE+G+ LS +++ + +L A +TT +++
Sbjct: 190 YLSDLLERKRTEP---DDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLI- 245
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASI 349
G + RKL E +S V E LR S
Sbjct: 246 ------------GNGVLALLTHPDQRKLLAEDPSLIS-----------SAVEEFLRFDSP 282
Query: 350 ISFT-FREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
+S R DV Y G IP G V+ + + ++ +P + D +R +
Sbjct: 283 VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR-----DASGG 337
Query: 409 MPFGSGVHSCPGNELAKLEMLVMIHHL 435
+ FG G+H C G +LA+LE V I L
Sbjct: 338 VFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 163/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 4 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 62
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L+G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 63 VAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 122
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 123 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 175
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 176 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 232
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
T ++ +I H S + +Q +L
Sbjct: 233 ---RPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 268
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 162/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 4 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 62
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L+G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 63 VAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 122
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 123 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 175
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 176 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 232
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
T + +I H S + +Q +L
Sbjct: 233 ---RPTVEIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 268
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 269 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 328
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 329 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 388
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 389 RLPALPKSGFVMR 401
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 162/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 12 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 70
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 71 VAIQKTLFGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 130
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 131 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 183
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 184 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 240
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
T ++ +I H S + +Q +L
Sbjct: 241 ---RPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 276
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 277 FVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 163/433 (37%), Gaps = 49/433 (11%)
Query: 47 ETLQLYSQDPNVFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYP 105
ETL L + DP F + + +R G F++ L L ++AA+ T + P
Sbjct: 12 ETLSLLA-DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAEIFYDTTRFEREGAMP 70
Query: 106 KSKER-LIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSW-HGGH 163
+ ++ L+G + G+ H +++ G ++ E +R L EA A+ W G
Sbjct: 71 VAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTRKGE 130
Query: 164 IINTFQEMKKLSFEVGTLTIFGHLKD---NYKGELKKNYLIVDKGYNSFSTNIPGTPYKK 220
I+ + + L+ V D N GEL+ + ++ + P + +
Sbjct: 131 IVFYDELHEPLTRAVCAWAGVPLPDDEAGNRAGELRALF-------DAAGSASPRHLWSR 183
Query: 221 ALQARKRLNEILSDIIRERKEKRLHEKDLLGC--LLNSKDENGEVLSDDKIADNIIGVLF 278
AR+R++ II + + + +D + ++LS A ++ VL
Sbjct: 184 L--ARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVL- 240
Query: 279 AAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYK 338
T ++ +I H S + +Q +L
Sbjct: 241 ---RPTVAIAVYITFVAHALQTCSGIRAALVQQPDYAEL--------------------- 276
Query: 339 VVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E R A D E++G P+G +V+ +H+ + DPQ+F P R
Sbjct: 277 FVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPER 336
Query: 399 FEVAPKPN-TFMPFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYG 453
F + + F+P G G H CPG + M V H LV R++V I +
Sbjct: 337 FRAWDEDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFA 396
Query: 454 PFP-IPYQGFPAR 465
P +P GF R
Sbjct: 397 RLPALPKSGFVMR 409
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 16/237 (6%)
Query: 218 YKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCL-----LNSKDENGEVLSDDKIADN 272
YKK ++ K L + + +I E++ + E+ L C+ L ++ G+ L+ + +
Sbjct: 241 YKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGD-LTRENVNQC 299
Query: 273 IIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEE-GNQPLSWTQTR 331
I+ +L AA DT + + +++ + E+ I+++ G + + +
Sbjct: 300 ILEMLIAAPDTMSVSLFFMLFLIAKHPN--------VEEAIIKEIQTVIGERDIKIDDIQ 351
Query: 332 NMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDP 391
+ V + ES+R ++ R+A+ D GY + KG ++ L H E+F P
Sbjct: 352 KLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNII-LNIGRMHRLEFFPKP 410
Query: 392 QKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQS 448
+F F F PFG G C G +A + M ++ L+ +F + + Q
Sbjct: 411 NEFTLENFAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQC 467
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 326 SWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNP 385
SW R K V E+LR + + T R V+ + +I +G V + + +
Sbjct: 231 SWDYVREKG-ALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDE 289
Query: 386 EYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIG 445
E F DP F P R PN + FGSG+H C G LA+LE + + KFR + I
Sbjct: 290 EVFKDPDSFIPDR-----TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIV 344
Query: 446 SQSGIQ 451
+ I
Sbjct: 345 KKEKID 350
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 245 HEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRG 304
H++ G + S+ +GE L++D++A +G+LFA D+ AS+M V L + +
Sbjct: 208 HKRAEPGPDIISRLNDGE-LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLL--AAHPDQR 264
Query: 305 SKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYK 364
+ +A+ + + EE VL + R + R A D+E+
Sbjct: 265 AAALADPDVMARAVEE-------------------VLRTARAGGSV-LPPRYASEDMEFG 304
Query: 365 GYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELA 424
G I G VL + + FT P++FD +R PN + FG G+ C G LA
Sbjct: 305 GVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAAR-----TPNPHLTFGHGIWHCIGAPLA 359
Query: 425 KLEMLVMIHHLVTKF 439
+LE+ M L T+
Sbjct: 360 RLELRTMFTKLFTRL 374
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E++R S + FR DVE G I +G KVL + + +P + DP ++D +R
Sbjct: 290 EAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR--- 346
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
K + + FGSGVH C G +A+LE V++ L K
Sbjct: 347 --KTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 205 GYNSFSTNIPGTPYKKA--LQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGE 262
G F T+I +P +A L ++L++ L +I+ER+ DL+ L S+ E G
Sbjct: 196 GVADFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNP--GSDLISILCTSEYE-GM 252
Query: 263 VLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGN 322
LSD I I+ VL AA + + ++ +L + E + N
Sbjct: 253 ALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPE-------------------QMN 293
Query: 323 QPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIH 382
L+ + + + + E+LR + R+ D G I K V + +
Sbjct: 294 DVLA-----DRSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAAN 348
Query: 383 HNPEYFTDPQKFDPSRFEVAPK-----PNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVT 437
+PE F P F+ R ++ K + FGSG+H+C G AK E+ ++ + ++
Sbjct: 349 RDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLD 408
Query: 438 KFR 440
K R
Sbjct: 409 KMR 411
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 52/327 (15%)
Query: 114 PSAIFFHQGDYHLRLRKIVQGSLSLEAIREL---VTDIEAAAVAALDSWHGGHIINTFQE 170
P I D H RLRK+V S ++ + EL +T+I +A L +
Sbjct: 85 PMMILMDPPD-HTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPT------DGPVDL 137
Query: 171 MKKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNE 230
M++ +F++ I L E + ++ ++S + +P A +L+
Sbjct: 138 MREYAFQIPVQVICELL--GLPAEDRDDF----SAWSSVLVD--DSPADDKNAAMGKLHG 189
Query: 231 ILSDII-RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
LSD++ R+R E + LL LL D +G+ LS +++ + +L A +TT +++
Sbjct: 190 YLSDLLERKRTEP---DDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLI- 245
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASI 349
G + RKL E +S V E LR S
Sbjct: 246 ------------GNGVLALLTHPDQRKLLAEDPSLIS-----------SAVEEFLRFDSP 282
Query: 350 ISFT-FREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
+S R DV Y G IP G V+ + + ++ +P + D +R +
Sbjct: 283 VSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR-----DASGG 337
Query: 409 MPFGSGVHSCPGNELAKLEMLVMIHHL 435
+ FG G+H C G +LA+LE V I L
Sbjct: 338 VFFGHGIHFCLGAQLARLEGRVAIGRL 364
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 232 LSDII-RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW 290
+ D+I R RKE DL+ L+ ++D+ + LS+ ++ D IG+L A ++T + +
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIAD 265
Query: 291 IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASII 350
V L + E R + + + I EE TR +P+ +
Sbjct: 266 FVYLLMTRPELRR--QLLDRPELIPSAVEE--------LTRWVPL------------GVG 303
Query: 351 SFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMP 410
+ R AV DV +G I G VL + + F D + D R PN +
Sbjct: 304 TAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----TPNQHLG 358
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLV------------TKFRWEVIGSQSGIQYGPFPIP 458
FG GVH C G LA++E+ V + L+ T+ RW S+ + GP +P
Sbjct: 359 FGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEGMLLRGPLELP 414
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 232 LSDII-RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW 290
+ D+I R RKE DL+ L+ ++D+ + LS+ ++ D IG+L A ++T + +
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIAD 265
Query: 291 IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASII 350
V L + E R + + + I EE TR +P+ +
Sbjct: 266 FVYLLMTRPELRR--QLLDRPELIPSAVEE--------LTRWVPL------------GVG 303
Query: 351 SFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMP 410
+ R AV DV +G I G VL + + F D + D R PN +
Sbjct: 304 TAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----TPNQHLG 358
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLV------------TKFRWEVIGSQSGIQYGPFPIP 458
FG GVH C G LA++E+ V + L+ T+ RW S+ + GP +P
Sbjct: 359 FGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEGMLLRGPLELP 414
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E++R S + FR +VE G +I +G KVL + + +P ++DP +D +R
Sbjct: 288 EAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR--- 344
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
K + + FGSGVH C G +A+LE VM+ L K
Sbjct: 345 --KTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARK 379
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 327 WTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPE 386
W + R + K + E+LR + + T R+ V+ I +G V + + + E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 387 YFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
F D +KF P R PN + FGSG+H C G LA+LE + I +FR
Sbjct: 291 VFHDGEKFIPDR-----NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 327 WTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPE 386
W + R + K + E+LR + + T R+ V+ I +G V + + + E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEE 290
Query: 387 YFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
F D +KF P R PN + FGSG+H C G LA+LE + I +FR
Sbjct: 291 VFHDGEKFIPDR-----NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR 339
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 48/240 (20%)
Query: 232 LSDII-RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW 290
+ D+I R RKE DL+ L+ ++D+ + LS+ ++ D IG+L A ++T + +
Sbjct: 210 MGDLIDRRRKEP---TDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIAD 265
Query: 291 IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASII 350
V L + E R + + + I EE TR +P+
Sbjct: 266 FVYLLMTRPELRR--QLLDRPELIPSAVEE--------LTRWVPLGVGTAFP-------- 307
Query: 351 SFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMP 410
R AV DV +G I G VL + + F D + D R PN +
Sbjct: 308 ----RYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDR-----TPNQHLG 358
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLV------------TKFRWEVIGSQSGIQYGPFPIP 458
FG GVH C G LA++E+ V + L+ T+ RW S+ + GP +P
Sbjct: 359 FGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRW----SEGMLLRGPLELP 414
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 18/193 (9%)
Query: 249 LLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGI 308
L+ + K E G+ L+ D + GVL + T + Y ET+ +
Sbjct: 200 LVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGY-----ETTNHQLAL 254
Query: 309 AEQKAIRKLNEEGNQPLSWTQTRNMP-VTYKVVLESLRMASIISFTF-REAVADVEYKGY 366
A + + P W + + P + + V E LR + + T R A D E G
Sbjct: 255 A-------MYDFAQHPDQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGV 307
Query: 367 LIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKL 426
IP G V H +P F D +FD + AP + FG G H C G LA+L
Sbjct: 308 RIPTGTPVFMCAHVAHRDPRVFADADRFDITVKREAPS----IAFGGGPHFCLGTALARL 363
Query: 427 EMLVMIHHLVTKF 439
E+ + L T+
Sbjct: 364 ELTEAVAALATRL 376
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 321 GNQPLSWTQTRNMP-VTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLF 378
P W + + P + + V E LR + + T R A D E G IP G V
Sbjct: 270 AQHPDQWMKIKENPELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCA 329
Query: 379 RNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTK 438
H +P F D +FD + AP + FG G H C G LA+LE+ + L T+
Sbjct: 330 HVAHRDPRVFADADRFDITVKREAPS----IAFGGGPHFCLGTALARLELTEAVAALATR 385
Query: 439 F 439
Sbjct: 386 L 386
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE KG I G V + + +PE F DP + D FE +P P+ + FG G
Sbjct: 295 RIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID---FERSPNPH--VSFGFG 349
Query: 415 VHSCPGNELAKLEMLVMIHHLVTK 438
H CPG LA+LE +++ ++ +
Sbjct: 350 PHYCPGGMLARLESELLVDAVLDR 373
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 182/461 (39%), Gaps = 63/461 (13%)
Query: 23 TRDKTEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVM 82
TR + EP L G + W +G L+ + +D F ++++G+IF G +
Sbjct: 14 TRRRNEP----PLDKGMIPW--LGHALE-FGKDAAKFLTRMKEKHGDIFTVRAAGLYITV 66
Query: 83 LASSEAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFH-------QGDYHLRLRKIVQGS 135
L S VL A L + +Y + + I + H + + H + + Q S
Sbjct: 67 LLDSNCYDAVLSDVASLDQTSYAQVLMKRIFNMILPSHNPESEKKRAEMHFQGASLTQLS 126
Query: 136 LSLEA-IRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLSFEVGTLTIFGHLKDNYKG- 193
S++ +R L+T E + W + N L F+ G LT+FG +N
Sbjct: 127 NSMQNNLRLLMTPSEMGLKTS--EWKKDGLFNL---CYSLLFKTGYLTVFGAENNNSAAL 181
Query: 194 -ELKKNYLIVDKGYNSFS-TNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLG 251
++ + + DK + T + + A AR++L + L+ +RK + E+ LG
Sbjct: 182 TQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPR---EQSWLG 238
Query: 252 CLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQ 311
+ + G + + ++ L+ Q W++ YL E R
Sbjct: 239 SYVKQLQDEG--IDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALR-------- 288
Query: 312 KAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEY-----KGY 366
A+R+ + G + +N PV V+ E+LR+ + T R+ D + + Y
Sbjct: 289 -AVREEIQGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT-RDVTQDKKICLSNGQEY 346
Query: 367 LIPKGWK--VLPLFR-----NIHHNPEYFTDPQKFDPSRFEVAPKPNTF----------M 409
+ +G + V P IH PE F + + R E K + F +
Sbjct: 347 HLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTE---KKDFFKNGARVKYPSV 403
Query: 410 PFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGI 450
P+G+ + CPG A + ++ ++T+F E+ + +
Sbjct: 404 PWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATV 444
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 285 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 340
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 341 QHFCPGSALGRRHAQIGIEALLKKM 365
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 240 KEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQS 299
+++R++ D L L + +GE LS +IA I ++ A +TT + +T H
Sbjct: 235 EDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAIT------HGVL 288
Query: 300 ETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVA 359
SR EQ+ + +G P + V E +R AS + + R
Sbjct: 289 ALSR----YPEQRDRWWSDFDGLAPTA-------------VEEIVRWASPVVYMRRTLTQ 331
Query: 360 DVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPF-GSGVHSC 418
D+E +G + G KV + + + + F DP FD +R PN + F G G H C
Sbjct: 332 DIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR-----NPNPHLGFGGGGAHFC 386
Query: 419 PGNELAKLEMLVMIHHL 435
G LA+ E+ V L
Sbjct: 387 LGANLARREIRVAFDEL 403
>pdb|3IVY|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, P212121 Crystal Form
pdb|3IW0|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125, C2221 Crystal Form
pdb|3IW1|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Androstenedione
pdb|3IW2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Econazole
Length = 433
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 34/201 (16%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++ ++ +EK + D + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 219 ELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 278
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNM-PVTYKVVLESLRMAS 348
+G AE P W + + P T E +R A+
Sbjct: 279 -------------QGMMAFAEH------------PDQWELYKKVRPET--AADEIVRWAT 311
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
++ R A+ D E G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 312 PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR-----NPNPH 366
Query: 409 MPFG-SGVHSCPGNELAKLEM 428
+ FG +G H C G LA++ +
Sbjct: 367 VGFGGTGAHYCIGANLARMTI 387
>pdb|2X5W|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp125 In Complex With Substrate Cholest-4-En-3-One
Length = 440
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++ ++ +EK + D + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 226 ELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 285
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNM-PVTYKVVLESLRMAS 348
+G AE P W + + P T E +R A+
Sbjct: 286 -------------QGMMAFAEH------------PDQWELYKKVRPET--AADEIVRWAT 318
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
++ R A+ D E G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 319 PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR-----NPNPH 373
Query: 409 MPFG-SGVHSCPGNELAKL 426
+ FG +G H C G LA++
Sbjct: 374 VGFGGTGAHYCIGANLARM 392
>pdb|2XN8|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125
Length = 423
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 34/201 (16%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++ ++ +EK + D + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 209 ELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 268
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNM-PVTYKVVLESLRMAS 348
+G AE P W + + P T E +R A+
Sbjct: 269 -------------QGMMAFAEH------------PDQWELYKKVRPET--AADEIVRWAT 301
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
++ R A+ D E G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 302 PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR-----NPNPH 356
Query: 409 MPFG-SGVHSCPGNELAKLEM 428
+ FG +G H C G LA++ +
Sbjct: 357 VGFGGTGAHYCIGANLARMTI 377
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 34/209 (16%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++S ++ +E+ ++ + + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 202 ELISYAMKMAEERAVNPTEDIVTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 261
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWT-QTRNMPVTYKVVLESLRMAS 348
G A+ P W + P T E +R A+
Sbjct: 262 -------------HGMIAFAQN------------PDQWELYKKERPET--AADEIVRWAT 294
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
+S R A+ DVE G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 295 PVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFDEEVFEDPHTFNILR-----SPNPH 349
Query: 409 MPF-GSGVHSCPGNELAKLEMLVMIHHLV 436
+ F G+G H C G LA++ + ++ + +
Sbjct: 350 VGFGGTGAHYCIGANLARMTINLIFNAIA 378
>pdb|2XC3|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cyp125 Bound
To The Reverse Type I Inhibitor
Length = 424
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++ ++ +EK + D + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 210 ELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 269
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNM-PVTYKVVLESLRMAS 348
+G AE P W + + P T E +R A+
Sbjct: 270 -------------QGMMAFAEH------------PDQWELYKKVRPET--AADEIVRWAT 302
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
++ R A+ D E G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 303 PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR-----NPNPH 357
Query: 409 MPFG-SGVHSCPGNELAKL 426
+ FG +G H C G LA++
Sbjct: 358 VGFGGTGAHYCIGANLARM 376
>pdb|2X5L|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp125, Alternative Crystal
Form
Length = 431
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 34/199 (17%)
Query: 230 EILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMT 289
E++ ++ +EK + D + L D +GE LSDD+ ++ + A +TT + +T
Sbjct: 217 ELIGYAMKMAEEKAKNPADDIVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSIT 276
Query: 290 WIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNM-PVTYKVVLESLRMAS 348
+G AE P W + + P T E +R A+
Sbjct: 277 -------------QGMMAFAEH------------PDQWELYKKVRPET--AADEIVRWAT 309
Query: 349 IISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF 408
++ R A+ D E G I KG +V+ +R+ + + E F DP F+ R PN
Sbjct: 310 PVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILR-----NPNPH 364
Query: 409 MPFG-SGVHSCPGNELAKL 426
+ FG +G H C G LA++
Sbjct: 365 VGFGGTGAHYCIGANLARM 383
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 49/324 (15%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGH---IINTFQEMKKLSFEVGTL 181
H R+RK+V S + AI L +I+ LD+ G ++ + E + L
Sbjct: 103 HARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALL 162
Query: 182 TIFGHLKDNYK--GELKKNYL---IVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDII 236
+ + ++ G L +V + T + AL L ++
Sbjct: 163 KVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLAL---------LHGVL 213
Query: 237 RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLH 296
ER+ L E D+L LL + + +G LS ++ + ++ A DTT ++ + V L
Sbjct: 214 DERRRNPL-ENDVLTMLLQA-EADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLL 271
Query: 297 DQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISF-TFR 355
E K AE +R + E LR +I+ T R
Sbjct: 272 RSPEALELVK--AEPGLMRN----------------------ALDEVLRFENILRIGTVR 307
Query: 356 EAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGV 415
A D+EY G I KG V L + + F+ P FD R + + +G G
Sbjct: 308 FARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR-----DTSASLAYGRGP 362
Query: 416 HSCPGNELAKLEMLVMIHHLVTKF 439
H CPG LA+LE + + + +F
Sbjct: 363 HVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 49/324 (15%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGH---IINTFQEMKKLSFEVGTL 181
H R+RK+V S + AI L +I+ LD+ G ++ + E + L
Sbjct: 103 HARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALL 162
Query: 182 TIFGHLKDNYK--GELKKNYL---IVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDII 236
+ + ++ G L +V + T + AL L ++
Sbjct: 163 KVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLAL---------LHGVL 213
Query: 237 RERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLH 296
ER+ L E D+L LL + + +G LS ++ + ++ A DTT ++ + V L
Sbjct: 214 DERRRNPL-ENDVLTMLLQA-EADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLL 271
Query: 297 DQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISF-TFR 355
E K AE +R + E LR +I+ T R
Sbjct: 272 RSPEALELVK--AEPGLMRN----------------------ALDEVLRFDNILRIGTVR 307
Query: 356 EAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGV 415
A D+EY G I KG V L + + F+ P FD R + + +G G
Sbjct: 308 FARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR-----DTSASLAYGRGP 362
Query: 416 HSCPGNELAKLEMLVMIHHLVTKF 439
H CPG LA+LE + + + +F
Sbjct: 363 HVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3LXH|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXH|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101d1
pdb|3LXI|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d1
pdb|3LXI|B Chain B, Crystal Structure Of Camphor-Bound Cyp101d1
Length = 421
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 142/353 (40%), Gaps = 52/353 (14%)
Query: 125 HLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHG-GHIINTFQEMKKLSFEVGTLTI 183
H RK + L+L IR+L I AV ++ + GH F F V
Sbjct: 110 HTPYRKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHC--EFGSEFSTVFPVRVFLA 167
Query: 184 FGHL--KDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKE 241
L +D K L N + G N P + A K E ++ II R+
Sbjct: 168 LAGLPVEDATKLGLLANEMTRPSG------NTPEEQGRSLEAANKGFFEYVAPIIAARRG 221
Query: 242 KRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSET 301
DL+ +LN + +G+ + DD+ + +L DT + + +++ YL
Sbjct: 222 GS--GTDLITRILNV-EIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYL------ 272
Query: 302 SRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADV 361
SR + +AE + +PL + V E R +++S R V+D+
Sbjct: 273 SRHPETVAEMR---------REPLKLQRG---------VEELFRRFAVVS-DARYVVSDM 313
Query: 362 EYKGYLIPKGWKVLPLFRNIHH-NPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPG 420
E+ G ++ +G +L L +H + + DP D SR +V T F G H C G
Sbjct: 314 EFHGTMLKEGDLIL-LPTALHGLDDRHHDDPMTVDLSRRDV-----THSTFAQGPHRCAG 367
Query: 421 NELAKLEMLVMIHHLVTK---FRWE---VIGSQSGIQYGPFPIPYQGFPARFS 467
LA+LE+ VM+ + + FR + V SGI IP + P R S
Sbjct: 368 MHLARLEVTVMLQEWLARIPEFRLKDRAVPIYHSGIVAAVENIPLEWEPQRVS 420
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 36/233 (15%)
Query: 209 FSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDK 268
FST TP ++ + L I++D + KR D L L ENG+ L+D +
Sbjct: 178 FSTQ---TPPEEVVATLTELASIMTDTV---AAKRAAPGDDLTSALIQASENGDHLTDAE 231
Query: 269 IADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWT 328
I + ++ A +TT S++ V L E Q+A+ E W+
Sbjct: 232 IVSTLQLMVAAGHETTISLIVNAVVNLSTHPE----------QRALVLSGEA-----EWS 276
Query: 329 QTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPE- 386
VV E+LR ++ S R A DV +IP G ++ + + +
Sbjct: 277 ---------AVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERA 327
Query: 387 YFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ +FD +R N + FG G H CPG L+++E V + L +F
Sbjct: 328 HGPTADRFDLTRT----SGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + G G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAHGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H CPG+ L + + I L+ K
Sbjct: 342 QHFCPGSALGRRHAQIGIEALLKKM 366
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 81/226 (35%), Gaps = 31/226 (13%)
Query: 217 PYKKALQAR--KRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNII 274
P AL R LN + + + E+R D L L + +G L D++ A+
Sbjct: 197 PTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFST 256
Query: 275 GVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMP 334
+L A TT ++ IV+ L + P W P
Sbjct: 257 ALLLAGHITTTVLLGNIVRTLDEH-------------------------PAHWDAAAEDP 291
Query: 335 VTYKVVLES-LRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQK 393
++E LR R E G IP V + + + + DP +
Sbjct: 292 GRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDR 351
Query: 394 FDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
FDPSR + FG GVH C G LA+LE V + ++ +F
Sbjct: 352 FDPSRKSGG---AAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 81/226 (35%), Gaps = 31/226 (13%)
Query: 217 PYKKALQAR--KRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNII 274
P AL R LN + + + E+R D L L + +G L D++ A+
Sbjct: 177 PTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFST 236
Query: 275 GVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMP 334
+L A TT ++ IV+ L + P W P
Sbjct: 237 ALLLAGHITTTVLLGNIVRTLDEH-------------------------PAHWDAAAEDP 271
Query: 335 VTYKVVLES-LRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQK 393
++E LR R E G IP V + + + + DP +
Sbjct: 272 GRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDR 331
Query: 394 FDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
FDPSR + FG GVH C G LA+LE V + ++ +F
Sbjct: 332 FDPSRKSGG---AAQLSFGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A AD++ L+ KG VL L + +PE+F +P + R P P + + FG G
Sbjct: 286 RLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRG 341
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H C G+ L + + I L+ K
Sbjct: 342 QHFCLGSALGRRHAQIGIEALLKKM 366
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 321 GNQPLSWTQTRNMPVTYKVVL-ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFR 379
+P +T RN ++ E +RM R DVE G LI G + +
Sbjct: 248 ARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIG 307
Query: 380 NIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ +PE F DP FD +R P + + FG G HSC G +++ E + L ++
Sbjct: 308 AANRDPEVFDDPDVFDHTR---PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERY 364
Query: 440 RWEVIGSQSGIQYGPFPIPYQGFP 463
+ + + + F Y+ P
Sbjct: 365 ERIELAEEPTVAHNDFARRYRKLP 388
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 321 GNQPLSWTQTRNMPVTYKVVL-ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFR 379
+P +T RN ++ E +RM R DVE G LI G + +
Sbjct: 250 ARRPEVFTAFRNDESARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIG 309
Query: 380 NIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ +PE F DP FD +R P + + FG G HSC G +++ E + L ++
Sbjct: 310 AANRDPEVFDDPDVFDHTR---PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERY 366
Query: 440 RWEVIGSQSGIQYGPFPIPYQGFP 463
+ + + + F Y+ P
Sbjct: 367 ERIELAEEPTVAHNDFARRYRKLP 390
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 225 RKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTT 284
+ RL ++LS R +R H L L +E G +S++ A ++ L+A Q
Sbjct: 224 KSRLWKLLSPA---RLARRAHRSKWLESYLLHLEEMG--VSEEMQARALVLQLWATQGNM 278
Query: 285 ASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQT------RNMPVTYK 338
W++ +L E +G + + + QP+S T T + PV
Sbjct: 279 GPAAFWLLLFLLKNPEALAAVRG-----ELESILWQAEQPVSQTTTLPQKVLDSTPVLDS 333
Query: 339 VVLESLRMASIISFTFREAVADV-----EYKGYLIPKGWKVLPL-FRNIHHNPEYFTDPQ 392
V+ ESLR+ + F RE V D+ + + + + +G ++L F + +PE +TDP+
Sbjct: 334 VLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPE 392
Query: 393 KFDPSRFEVAPK--------------PNTFMPFGSGVHSCPG-----NELAKLEMLVMIH 433
F +RF + P N MP+G+G + C G N + + LV++H
Sbjct: 393 VFKYNRF-LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVH 451
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 231 ILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTW 290
+L+ I RERKE + ++G ++ E G+ +D+++ + V+ A D + ++
Sbjct: 194 LLAMIARERKEP---GEGMIGAVVA---EYGDDATDEELRGFCVQVMLAGDDNISGMIGL 247
Query: 291 IVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASII 350
V + E +G EQ A R ++E R + V Y
Sbjct: 248 GVLAMLRHPEQIDAFRG-DEQSAQRAVDE---------LIRYLTVPY------------- 284
Query: 351 SFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMP 410
S T R A D+ G I KG V+ + +P D + D +R +P +
Sbjct: 285 SPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR-----EPIPHVA 339
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
FG GVH C G LA+LE+ + L +F
Sbjct: 340 FGHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 225 RKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTT 284
+ RL ++LS R +R H L L +E G +S++ A ++ L+A Q
Sbjct: 212 KSRLWKLLSPA---RLARRAHRSKWLESYLLHLEEMG--VSEEMQARALVLQLWATQGNM 266
Query: 285 ASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQT------RNMPVTYK 338
W++ +L E +G + + + QP+S T T + PV
Sbjct: 267 GPAAFWLLLFLLKNPEALAAVRG-----ELESILWQAEQPVSQTTTLPQKVLDSTPVLDS 321
Query: 339 VVLESLRMASIISFTFREAVADV-----EYKGYLIPKGWKVLPL-FRNIHHNPEYFTDPQ 392
V+ ESLR+ + F RE V D+ + + + + +G ++L F + +PE +TDP+
Sbjct: 322 VLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPE 380
Query: 393 KFDPSRFEVAPK--------------PNTFMPFGSGVHSCPG-----NELAKLEMLVMIH 433
F +RF + P N MP+G+G + C G N + + LV++H
Sbjct: 381 VFKYNRF-LNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVH 439
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE G I G V + + +P+ F DP + D R PN + +G+G
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPHLAYGNG 352
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H C G LA+++ +++ L+ +
Sbjct: 353 HHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A+ DVE G I G V + + +P+ F DP + D R PN + +G+G
Sbjct: 298 RIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-----DPNPHLAYGNG 352
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H C G LA+++ +++ L+ +
Sbjct: 353 HHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 31/179 (17%)
Query: 259 ENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLN 318
+ G LS D I + +L A +TT + + +K + +A R +
Sbjct: 234 DTGSPLSVDGIVGTCVHLLTAGHETTTNFL----------------AKAVLTLRAHRDVL 277
Query: 319 EEGNQPLSWTQTRNMPVTYKVVLESL-RMASIISFTFREAVADVEYKGYLIPKGWKVLPL 377
+E R P + +E L R + R A D+ + IP+G +V+ L
Sbjct: 278 DE---------LRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVAL 328
Query: 378 FRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLV 436
+ + +P F DP D R + FG G+H C G LA+ E + + L+
Sbjct: 329 LGSANRDPARFPDPDVLDVHR-----AAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 331 RNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTD 390
R+ VV E LR S+ R A D+E G I G VL ++ + + + +
Sbjct: 271 RDPGAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYEN 330
Query: 391 PQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
P FD R + FG G+H C G LA+ E+ + + L +
Sbjct: 331 PDIFDARR-----NARHHVGFGHGIHQCLGQNLARAELEIALGGLFARI 374
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/418 (20%), Positives = 147/418 (35%), Gaps = 45/418 (10%)
Query: 58 VFFAAKQKRYG-EIFKTHILGCPCVMLASSEAAKFVLVTQAHLFKPTYPKSKER-LIGPS 115
+F + +RY ++F+ +LG + + +EAAK T + PK ++ L G +
Sbjct: 23 LFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVN 82
Query: 116 AIFFHQGDYHLRLRKIVQGSLSLEAIRELVTDIEAAAVAALDSWHGGHIINTFQEMKKLS 175
AI G H+ + + ++ + L + AA+ W + F+E K++
Sbjct: 83 AIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEIL 142
Query: 176 FEVGTLTIFGHLKDNYKGELKKNYLIVDKGYNSFSTNIPGTPYKKALQARKRLNEILSDI 235
V LK+ E +++ + + + G + K +AR R E + +
Sbjct: 143 CRVACYWAGVPLKETEVKERADDFIDMVDAFGAV-----GPRHWKGRRARPRAEEWIEVM 197
Query: 236 IRERKEKRLHEKDLLGCLLNS----KDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWI 291
I + + L K G L+ E+G L A +I VL + + +
Sbjct: 198 IEDARAGLL--KTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIV-AISYFLVFS 254
Query: 292 VKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIIS 351
LH+ + W ++ N V E R
Sbjct: 255 ALALHEHPKYK-----------------------EWLRSGNSREREMFVQEVRRYYPFGP 291
Query: 352 FTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTF--M 409
F D + KG VL +H+P + P +F P RF + N F +
Sbjct: 292 FLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF-AEREENLFDMI 350
Query: 410 PFGSG----VHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQYGPFP-IPYQGF 462
P G G H CPG + M + LV + ++V P +P GF
Sbjct: 351 PQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGF 408
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 340 VLESLRMASIISFT-FREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSR 398
V E+LR S I F R A D I KG +V+ + + + +F +P F R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
Query: 399 FEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFR 440
E+ + FG G+H C G LA+LE + ++ ++ F+
Sbjct: 282 REMH------LAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 336 TYKVVLESLRMASIIS-FTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKF 394
T V E LR +I T R A DVE G I G V+ + + +P F DP
Sbjct: 278 TPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVL 337
Query: 395 DPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
D R + FG G H C G LA++E+ ++ L +
Sbjct: 338 DVER-----GARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRI 377
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 330 TRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFT 389
T +P+ + E+LR+ + F R +D+ + Y IP G V ++ N F
Sbjct: 333 TTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFP 392
Query: 390 DPQKFDPSRF-EVAPKPNTF--MPFGSGVHSCPG 420
P++++P R+ ++ F +PFG G+ C G
Sbjct: 393 RPERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 355 REAVADVEYKGYLIPKGWKV-LPLFRNIHHN--PEYFTDPQKFDPSRFEVAPKPNTFMPF 411
R AVADV+ G I KG V LP ++ HN P F P++ RF+ P
Sbjct: 285 RNAVADVDADGVTIRKGDLVYLP---SVLHNLDPASFEAPEEV---RFDRGLAPIRHTTM 338
Query: 412 GSGVHSCPGNELAKLEMLVMIHH 434
G G H C G LA++E++V +
Sbjct: 339 GVGAHRCVGAGLARMEVIVFLRE 361
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 342 ESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR ASI+ R A+ADV G I G + + P RF+
Sbjct: 265 EVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAPG----------DRFD 314
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + T M FG G+H C G LA+L++ V + +V +F
Sbjct: 315 ITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 342 ESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR ASI+ R A+ADV G I G + + P RF+
Sbjct: 298 EVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAPG----------DRFD 347
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + T M FG G+H C G LA+L++ V + +V +F
Sbjct: 348 ITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNP-EYFTDPQKFDP 396
V E LR+ S + R DV IP G +VL L+ + + + +Y D + D
Sbjct: 284 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDV 343
Query: 397 SRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF-RWEVIGSQ---SGIQY 452
+R P + F G H C G A+++ V + L+ + +EV S+ SG Y
Sbjct: 344 TRC-----PRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSY 398
Query: 453 --GPFPIPYQ 460
P +P++
Sbjct: 399 VRRPLSVPFR 408
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNP-EYFTDPQKFDP 396
V E LR+ S + R DV IP G +VL L+ + + + +Y D + D
Sbjct: 284 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDV 343
Query: 397 SRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF-RWEVIGSQ---SGIQY 452
+R P + F G H C G A+++ V + L+ + +EV S+ SG Y
Sbjct: 344 TRC-----PRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSY 398
Query: 453 --GPFPIPYQ 460
P +P++
Sbjct: 399 VRRPLSVPFR 408
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 338 KVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNP-EYFTDPQKFDP 396
V E LR+ S + R DV IP G +VL L+ + + + +Y D + D
Sbjct: 285 DAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDV 344
Query: 397 SRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF-RWEVIGSQ---SGIQY 452
+R P + F G H C G A+++ V + L+ + +EV S+ SG Y
Sbjct: 345 TRC-----PRNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEVAESRIVWSGGSY 399
Query: 453 --GPFPIPYQ 460
P +P++
Sbjct: 400 VRRPLSVPFR 409
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 43/198 (21%)
Query: 248 DLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKG 307
DL+ ++NS + NGE ++ DK I +L DT + +++ + +L +R +
Sbjct: 225 DLITLMVNS-EINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHL------ARHPEL 277
Query: 308 IAEQKAIRKLNEEGNQPLSWTQ-TRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGY 366
+AE ++ PL + M + VV E+ R D EYKG
Sbjct: 278 VAELRS---------DPLKLMRGAEEMFRRFPVVSEA-----------RMVAKDQEYKGV 317
Query: 367 LIPKGWKVLPLFRNIH-----HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGN 421
+ +G +L L +H NPE P K D SR + + FG G H C G
Sbjct: 318 FLKRGDMIL-LPTALHGLDDAANPE----PWKLDFSRRSI-----SHSTFGGGPHRCAGM 367
Query: 422 ELAKLEMLVMIHHLVTKF 439
LA++E++V + + +
Sbjct: 368 HLARMEVIVTLEEWLKRI 385
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 43/198 (21%)
Query: 248 DLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKG 307
DL+ ++NS + NGE ++ DK I +L DT + +++ + +L +R +
Sbjct: 260 DLITLMVNS-EINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHL------ARHPEL 312
Query: 308 IAEQKAIRKLNEEGNQPLSWTQ-TRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGY 366
+AE ++ PL + M + VV E+ R D EYKG
Sbjct: 313 VAELRS---------DPLKLMRGAEEMFRRFPVVSEA-----------RMVAKDQEYKGV 352
Query: 367 LIPKGWKVLPLFRNIH-----HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGN 421
+ +G +L L +H NPE P K D SR + + FG G H C G
Sbjct: 353 FLKRGDMIL-LPTALHGLDDAANPE----PWKLDFSRRSI-----SHSTFGGGPHRCAGM 402
Query: 422 ELAKLEMLVMIHHLVTKF 439
LA++E++V + + +
Sbjct: 403 HLARMEVIVTLEEWLKRI 420
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 19/96 (19%)
Query: 387 YFTDPQKFDPSRF--EVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVI 444
+F D + F P RF E + PFG G C G + A LE +++ +FR + +
Sbjct: 303 HFPDGEAFRPERFLEERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL 362
Query: 445 GSQSGIQYGPFP--------IPYQGFPARFSKETKS 472
PFP P G PAR +E ++
Sbjct: 363 ---------PFPRVLAQVTLRPEGGLPARPREEVRA 389
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 35/231 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 345
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H CPG LA+ E++V + +T+ I + IQ+
Sbjct: 346 -----SHTTFGHGSHLCPGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 19/89 (21%)
Query: 387 YFTDPQKFDPSRF--EVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVI 444
YF + + F P RF E + PFG G C G + A LE +++ +FR + +
Sbjct: 303 YFPEGEAFQPERFLAERGTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL 362
Query: 445 GSQSGIQYGPFP--------IPYQGFPAR 465
PFP P G PAR
Sbjct: 363 ---------PFPRVLAQVTLRPEGGLPAR 382
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 74/181 (40%), Gaps = 31/181 (17%)
Query: 247 KDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSK 306
+DLL +L++ D ++S ++I ++ +F +T AS + V L
Sbjct: 203 EDLLALMLDAHDRG--LMSRNEIVSTVVTFIFTGHETVASQVGNAVLSL----------- 249
Query: 307 GIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLESLRMASIISFTFREAVADVEYKGY 366
+A + L R + + V E LR + R+ DVE +G
Sbjct: 250 -LAHPDQLDLLR------------RRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGR 296
Query: 367 LIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKL 426
+ + V+ L + +P + P FD E P P+ M FG+G+ C G+ LA+
Sbjct: 297 RLRRDDVVVVLAGAANRDPRRYDRPDDFD---IERDPVPS--MSFGAGMRYCLGSYLART 351
Query: 427 E 427
+
Sbjct: 352 Q 352
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 159/417 (38%), Gaps = 75/417 (17%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 28 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 77
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 78 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 116 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 169
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 170 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 224
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + + +L A T +++ V L + +A+ KA
Sbjct: 225 DKSDAVQIAFL-LLVAGNATMVNMIALGVATLAQHPDQ------LAQLKA---------- 267
Query: 324 PLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIH 382
N + + V E R + ++ R A DV L+ ++ ++ +
Sbjct: 268 --------NPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 383 HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 320 RDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 159/417 (38%), Gaps = 75/417 (17%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 27 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 76
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 77 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 114
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 115 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 168
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 169 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 223
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + + +L A T +++ V L + +A+ KA
Sbjct: 224 DKSDAVQIAFL-LLVAGNATMVNMIALGVATLAQHPDQ------LAQLKA---------- 266
Query: 324 PLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIH 382
N + + V E R + ++ R A DV L+ ++ ++ +
Sbjct: 267 --------NPSLAPQFVEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 383 HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 319 RDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 338 KVVLESLR-MASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDP 396
+VV E +R ++ + + R A+ DV G LI G VL + + DP D
Sbjct: 280 RVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDA 339
Query: 397 SRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHH 434
+R V+ + FG G+H C G LA+ ML M +
Sbjct: 340 NRAAVSD-----VGFGHGIHYCVGAALAR-SMLRMAYQ 371
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 33/230 (14%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQD 282
+A++ L + L II +R++K D + + N + NG ++ D+ +L D
Sbjct: 186 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDEAKRMCGALLLGGLD 242
Query: 283 TTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLE 342
T + +++ +++L E Q+ I + +P + E
Sbjct: 243 TVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE---E 278
Query: 343 SLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA 402
LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 279 LLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV- 336
Query: 403 PKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 337 ----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 382
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 186 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 241
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I++ +P +
Sbjct: 242 DTVVNFLSFSMEFLAKSPEH--------RQELIQR-------------PERIPAACE--- 277
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 278 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 335
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+L+++V + +T+ I + IQ+
Sbjct: 336 V-----SHTTFGHGSHLCLGQHLARLQIIVTLKEWLTRIPDFSIAPGAQIQH 382
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 156/419 (37%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 28 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 77
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 78 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 116 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 169
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 170 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 224
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + T M + G+A
Sbjct: 225 DKSDAV--QIAFLLLVAGNATMVNMIAL---------------GVATL---------AQH 258
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 259 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 317
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 318 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 156/419 (37%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 29 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 78
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 79 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 116
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 117 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 170
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 171 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 225
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + T M + G+A
Sbjct: 226 DKSDAV--QIAFLLLVAGNATMVNMIAL---------------GVATL---------AQH 259
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 260 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 318
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 319 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 156/419 (37%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 27 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 76
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 77 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 114
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 115 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 168
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 169 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 223
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + T M + G+A
Sbjct: 224 DKSDAV--QIAFLLLVAGNATMVNMIAL---------------GVATL---------AQH 257
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 258 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 317 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 158/417 (37%), Gaps = 75/417 (17%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 28 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 77
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 78 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 116 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 169
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 170 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 224
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + + +L A T +++ V L + +A+ KA
Sbjct: 225 DKSDAVQIAFL-LLVAGNATMVNMIALGVATLAQHPDQ------LAQLKA---------- 267
Query: 324 PLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIH 382
N + + V E R + + R A DV L+ ++ ++ +
Sbjct: 268 --------NPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 319
Query: 383 HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 320 RDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 33/230 (14%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQD 282
+A++ L + L II +R++K D + + N + NG ++ D+ +L D
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDEAKRMCGALLVGGLD 251
Query: 283 TTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVLE 342
T + +++ +++L E Q+ I + +P + E
Sbjct: 252 TVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE---E 287
Query: 343 SLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVA 402
LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 288 LLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV- 345
Query: 403 PKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 ----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 158/417 (37%), Gaps = 75/417 (17%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 27 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 76
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 77 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 114
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 115 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 168
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 169 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 223
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + + +L A T +++ V L + +A+ KA
Sbjct: 224 DKSDAVQIAFL-LLVAGNATMVNMIALGVATLAQHPDQ------LAQLKA---------- 266
Query: 324 PLSWTQTRNMPVTYKVVLESLRMASIISFTF-REAVADVEYKGYLIPKGWKVLPLFRNIH 382
N + + V E R + + R A DV L+ ++ ++ +
Sbjct: 267 --------NPSLAPQFVEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSAN 318
Query: 383 HNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 319 RDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 155/419 (36%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P +
Sbjct: 28 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELGAGGK 77
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 78 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 115
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 116 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 169
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 170 QNAIRTNGSST-ARQASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 224
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + T M + G+A
Sbjct: 225 DKSDAV--QIAFLLLVAGNATMVNMIAL---------------GVATL---------AQH 258
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 259 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 317
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 318 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVALG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 155/419 (36%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P +
Sbjct: 27 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELGAGGK 76
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 77 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 114
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 115 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 168
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 169 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 223
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + T M + G+A
Sbjct: 224 DKSDAV--QIAFLLLVAGNATMVNMIAL---------------GVATL---------AQH 257
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 258 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 317 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 160/419 (38%), Gaps = 79/419 (18%)
Query: 27 TEPRKKVKLPPGSMGWPLIGETLQLYSQDPNVFFAAKQKRYGEIFKTHILGCPCVMLASS 86
T P +VKL GS+ W L ++ +V F A ++ ++ G P + +
Sbjct: 27 TNPVSQVKLFDGSLAW--------LVTKHKDVCFVATSEKLSKVRTRQ--GFPELSASGK 76
Query: 87 EAAKFVLVTQAHLFKPTYPKSKERLIGPSAIFFHQGDYHLRLRKIVQGSLSLEAIRELVT 146
+AAK KPT+ + P H+ R +V+ + + EA++ L
Sbjct: 77 QAAKA---------KPTFVD-----MDPPE--------HMHQRSMVEPTFTPEAVKNLQP 114
Query: 147 DIEAAAVAALDSWHGGHIINTFQEM-KKLSFEVGTLTIFGHLKDNYKGELKKNYLIVDKG 205
I+ L+ N ++ K+ + V + I+ L + N L
Sbjct: 115 YIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPF------NDLEYLTQ 168
Query: 206 YNSFSTNIPGTPYKKALQARKRLNEILSDIIRERKEKRLHE--KDLLGCLLNSKDENGEV 263
N+ TN T ++A A + L + L+ ++ E+RL E D++ L + + G +
Sbjct: 169 QNAIRTNGSST-AREASAANQELLDYLAILV----EQRLVEPKDDIISKLCTEQVKPGNI 223
Query: 264 LSDDKIADNIIGVLFAAQDTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQ 323
D + I +L A + +VM ++ + G +A+
Sbjct: 224 DKSDAV--QIAFLLLVAGN---AVMVNMI---------ALGVATLAQH------------ 257
Query: 324 PLSWTQTRNMPVTYKVVLESL---RMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRN 380
P Q + P +E L AS ++ R A DV L+ ++ ++
Sbjct: 258 PDQLAQLKANPSLAPQFVEELCRYHTASALAIK-RTAKEDVMIGDKLVRANEGIIASNQS 316
Query: 381 IHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
+ + E F +P +F+ +R P + FG G H C LAK E+ + L KF
Sbjct: 317 ANRDEEVFENPDEFNMNR---KWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I++ +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIQR-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAASE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 345
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-NGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-AGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A DV L+ ++ ++ + + E F +P +F+ +R P + FG G
Sbjct: 291 RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR---KWPPQDPLGFGFG 347
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H C LAK E+ + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 355 REAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEVAPKPNTFMPFGSG 414
R A DV L+ ++ ++ + + E F +P +F+ +R P + FG G
Sbjct: 291 RTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR---KWPPQDPLGFGFG 347
Query: 415 VHSCPGNELAKLEMLVMIHHLVTKF 439
H C LAK E+ + L KF
Sbjct: 348 DHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 345
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 346
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 186 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 241
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 242 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 277
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 278 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 335
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 336 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 382
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 186 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 241
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 242 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 277
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 278 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 335
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 336 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 382
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 195 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 250
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 251 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 286
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVGGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPEH--------RQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVVGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 223 QARKRLNEILSDIIRERKEKRLHEKDLLGCLLNSKDENGEVLSDDKIADNIIGVLFAAQ- 281
+A++ L + L II +R++K D + + N + NG ++ D+ A + G+L
Sbjct: 196 EAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQ-VNGRPITSDE-AKRMCGLLLVTGL 251
Query: 282 DTTASVMTWIVKYLHDQSETSRGSKGIAEQKAIRKLNEEGNQPLSWTQTRNMPVTYKVVL 341
DT + +++ +++L E Q+ I + +P +
Sbjct: 252 DTVVNFLSFSMEFLAKSPE--------HRQELIER-------------PERIPAACE--- 287
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2JLA|A Chain A, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Semet Protein
pdb|2JLA|B Chain B, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Semet Protein
pdb|2JLA|C Chain C, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Semet Protein
pdb|2JLA|D Chain D, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Semet Protein
Length = 558
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 24 RDKTEPRKKVKLPPGSMGWPLIGETLQLYSQD-PNV-FFAAKQKRYGEIFKTHILGCPCV 81
R E KKV L ++GWPLIG+ L Q P + K E+ + I+ V
Sbjct: 230 RXSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIV----V 285
Query: 82 MLASSEAAKFVLVTQA 97
L SS K +L QA
Sbjct: 286 QLGSSLTGKRLLQWQA 301
>pdb|3BDZ|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BDZ|B Chain B, The Role Of Asn 242 In P450cin
pdb|3BE0|A Chain A, The Role Of Asn 242 In P450cin
pdb|3BE0|B Chain B, The Role Of Asn 242 In P450cin
Length = 397
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 390 DPQKFD-PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
D FD P + PN + G G+H C G L ++E V I + +
Sbjct: 311 DRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 361
>pdb|1T2B|A Chain A, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
pdb|1T2B|B Chain B, Crystal Structure Of Cytochrome P450cin Complexed With Its
Substrate 1,8-Cineole
Length = 397
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 390 DPQKFD-PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
D FD P + PN + G G+H C G L ++E V I + +
Sbjct: 311 DRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 361
>pdb|4FB2|A Chain A, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|B Chain B, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|C Chain C, Crystal Structure Of Substrate-Free P450cin
pdb|4FB2|D Chain D, Crystal Structure Of Substrate-Free P450cin
pdb|4FYZ|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FYZ|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cin
pdb|4FMX|A Chain A, Crystal Structure Of Substrate-Bound P450cin
pdb|4FMX|B Chain B, Crystal Structure Of Substrate-Bound P450cin
Length = 398
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 390 DPQKFD-PSRFEVAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKF 439
D FD P + PN + G G+H C G L ++E V I + +
Sbjct: 312 DRSAFDSPDNIVIERTPNRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRI 362
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 346
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 346
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 347 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVLPLFRNIHHNPEYFTDPQKFDPSRFEV 401
E LR S+++ R +D E+ G + KG ++L + P D SR +V
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKV 345
Query: 402 APKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
+ FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 -----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|2JLC|A Chain A, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Native Protein
pdb|2JLC|B Chain B, Crystal Structure Of E.Coli Mend,
2-Succinyl-5-Enolpyruvyl-
6-Hydroxy-3-Cyclohexadiene-1-Carboxylate Synthase -
Native Protein
Length = 577
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 24 RDKTEPRKKVKLPPGSMGWPLIGETLQLYSQD-PNV-FFAAKQKRYGEIFKTHILGCPCV 81
R E KKV L ++GWPLIG+ L Q P + K E+ + I+ V
Sbjct: 249 RMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIV----V 304
Query: 82 MLASSEAAKFVLVTQA 97
L SS K +L QA
Sbjct: 305 QLGSSLTGKRLLQWQA 320
>pdb|3FLM|A Chain A, Crystal Structure Of Mend From E.Coli
pdb|3FLM|B Chain B, Crystal Structure Of Mend From E.Coli
pdb|3HWW|A Chain A, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Oxoglutarate
pdb|3HWW|D Chain D, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Oxoglutarate
pdb|3HWX|A Chain A, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|B Chain B, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|I Chain I, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|J Chain J, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|R Chain R, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|S Chain S, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|Z Chain Z, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
pdb|3HWX|1 Chain 1, Crystal Structure Of Menaquinone Synthesis Protein Mend
From E. Coli In Complex With Thdp
Length = 556
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 24 RDKTEPRKKVKLPPGSMGWPLIGETLQLYSQD-PNV-FFAAKQKRYGEIFKTHILGCPCV 81
R E KKV L ++GWPLIG+ L Q P + K E+ + I+ V
Sbjct: 228 RMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIV----V 283
Query: 82 MLASSEAAKFVLVTQA 97
L SS K +L QA
Sbjct: 284 QLGSSLTGKRLLQWQA 299
>pdb|6CP4|A Chain A, P450cam D251n Mutant
Length = 414
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|1GEB|A Chain A, X-Ray Crystal Structure And Catalytic Properties Of
Thr252ile Mutant Of Cytochrome P450cam
Length = 415
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 288 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 345
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 346 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 392
>pdb|2CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
Length = 414
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Query: 342 ESLRMASIISFTFREAVADVEYKGYLIPKGWKVL-PLFRNIHHNPEYFTDPQKFDPSRFE 400
E LR S+++ R +D E+ G + KG ++L P + E P D SR +
Sbjct: 287 ELLRRFSLVA-DGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAC-PMHVDFSRQK 344
Query: 401 VAPKPNTFMPFGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGIQY 452
V + FG G H C G LA+ E++V + +T+ I + IQ+
Sbjct: 345 V-----SHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQH 391
>pdb|3HR4|A Chain A, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|C Chain C, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|E Chain E, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|G Chain G, Human Inos Reductase And Calmodulin Complex
Length = 219
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 411 FGSGVHSCPGNELAKLEMLVMIHHLVTKFRWEVIGSQSGI 450
FG+G CPGN + L M+ L KFR+ V G S +
Sbjct: 97 FGNG--DCPGNGEKLKKSLFMLKELNNKFRYAVFGLGSSM 134
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,629,981
Number of Sequences: 62578
Number of extensions: 623123
Number of successful extensions: 2116
Number of sequences better than 100.0: 253
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 314
length of query: 472
length of database: 14,973,337
effective HSP length: 102
effective length of query: 370
effective length of database: 8,590,381
effective search space: 3178440970
effective search space used: 3178440970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)