Query 042512
Match_columns 513
No_of_seqs 250 out of 2105
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 11:48:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042512.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042512hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 100.0 6.9E-49 2.4E-53 397.9 31.8 432 44-478 5-447 (460)
2 3mkt_A Multi antimicrobial ext 99.8 2E-18 7E-23 174.1 19.1 203 48-251 235-444 (460)
3 4aps_A DI-OR tripeptide H+ sym 85.1 29 0.001 33.7 28.0 57 413-470 412-468 (491)
4 3o7q_A L-fucose-proton symport 81.1 38 0.0013 32.1 31.6 41 50-90 25-67 (438)
5 1pw4_A Glycerol-3-phosphate tr 80.2 42 0.0014 32.0 35.9 22 450-471 410-431 (451)
6 1pw4_A Glycerol-3-phosphate tr 46.7 1.9E+02 0.0065 27.2 20.1 30 51-80 252-281 (451)
7 2jwa_A Receptor tyrosine-prote 28.7 81 0.0028 19.1 3.6 8 247-254 32-39 (44)
8 4ev6_A Magnesium transport pro 26.4 99 0.0034 28.5 5.9 25 454-479 314-338 (339)
9 2k1k_A Ephrin type-A receptor 19.0 87 0.003 18.2 2.4 26 228-253 13-38 (38)
10 4hkr_A Calcium release-activat 17.8 4.4E+02 0.015 22.1 13.2 158 26-187 2-169 (214)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=100.00 E-value=6.9e-49 Score=397.90 Aligned_cols=432 Identities=21% Similarity=0.353 Sum_probs=398.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhCcCC
Q 042512 44 FLAIKEARRIANIALPMILTGLLLYSRSMISMLFLGRLGDLALAGGSLAIGFGNITGYSLLSGLAMGMETICGQAFGAAR 123 (513)
Q Consensus 44 ~~~~~~~~~i~~~~~p~~~~~~~~~l~~~~~~~~i~~lg~~~~~~~~~a~~~~~~~~~~~~~gl~~~~~~~~s~~~g~~~ 123 (513)
+..++..|++++.++|.++++++..+.+.+|+.+++|+|++++|+++++.++..+. ..+..|++.+..+.++|+.|++|
T Consensus 5 ~~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~ 83 (460)
T 3mkt_A 5 HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGR 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 45678899999999999999999999999999999999999999999999998776 67889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCChhhHH
Q 042512 124 YKLLGLTLQRTILLLLLSSIPIAFLWLNMKTILLFCGQEQDIAHEAQIYLLYSLPDLIALSFLHPLRIYLRTQSITLPLT 203 (513)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 203 (513)
+++.++.+++++.+.+++++++.+++.+.++++.+++.+++..+.+..|+++.+++.++..+...+.+++++.||++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (460)
T 3mkt_A 84 QHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAM 163 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999999999999999999887777788888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh-c---CCccchhHHHHHHHHHHHHHHHHHHHHHhccccc-c-cCCCCHHhHHHHHHHHHH
Q 042512 204 FCATFAIILHIPINYLLVSV-L---NLGLKGIALSSVWTNFNLVISLILYIMISGVHEK-T-WGGISLECFKEWRSLLNL 277 (513)
Q Consensus 204 ~~~~~~~~~~i~~~~~li~~-~---~~g~~g~a~a~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~ 277 (513)
..+++..++|+++++++++. + ++|+.|+++++++++.+..++..++.+++++.++ + ++++.+++++..|+++++
T Consensus 164 ~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 243 (460)
T 3mkt_A 164 VIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRL 243 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCSCCCCSSTTSSTTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhCcchhhhhhhhcccccCHHHHHHHHHH
Confidence 99999999999999999975 3 6999999999999999999988777766543321 1 122335567889999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHhHHHHHhHHHHHHHHHHHHHhhhcCCChHHHHHHHHHHH
Q 042512 278 AIPSCISVCLEWWWYEIMILLCGLLLNPQATVASMGILIQTTSLIYIFPSSLSFGVSTRVGNELGANCPKKAKLAAIIGL 357 (513)
Q Consensus 278 ~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~i~~~~~~i~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 357 (513)
+.|.+++++...+...+++.+++++|+ +++|+|+++.++.++...+..+++++..|.+++++|++|.+++++..+++.
T Consensus 244 ~~p~~~~~~~~~~~~~~~~~~~~~~g~--~~va~~~i~~~i~~~~~~~~~~~~~a~~p~i~~~~g~~~~~~~~~~~~~~~ 321 (460)
T 3mkt_A 244 GFPVAAALFFEVTLFAVVALLVAPLGS--TVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQDTKGAAIAANVGL 321 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCTTTTHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999965 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHhhhcCCcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhcCCCCchhHHHHHHHHHHHH
Q 042512 358 LSSFMLGFTALVFTAIVRNIWASMFTQDAEIIALTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKLGANINLGCFYLVG 437 (513)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 437 (513)
++.++++++++++++++++++..+|++|+++.+.+..++++++++.++.+++.+..+++++.||++.+++.++++.|+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 401 (460)
T 3mkt_A 322 MTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLG 401 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh----cC-CCcchHHHHHHHHHHHHHHHHHHHHHhcc
Q 042512 438 MPVAVWLSFY----SG-FDFEGLWCGLLAAQGSCVVTMLFVVARTD 478 (513)
Q Consensus 438 i~~~~~l~~~----~~-~g~~g~~~a~~~~~~~~~~~~~~~~~~~~ 478 (513)
+|+++++.+. ++ +|..|+|+++.+++.+..++..++++|..
T Consensus 402 i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~~~~ 447 (460)
T 3mkt_A 402 LPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLYWLQ 447 (460)
T ss_dssp HHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSSSSC
T ss_pred HHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 67 89999999999999999988877666543
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.79 E-value=2e-18 Score=174.11 Aligned_cols=203 Identities=17% Similarity=0.178 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhCcCChhHH
Q 042512 48 KEARRIANIALPMILTGLLLYSRSMISMLFLGRLGDLALAGGSLAIGFGNITGYSLLSGLAMGMETICGQAFGAARYKLL 127 (513)
Q Consensus 48 ~~~~~i~~~~~p~~~~~~~~~l~~~~~~~~i~~lg~~~~~~~~~a~~~~~~~~~~~~~gl~~~~~~~~s~~~g~~~~~~~ 127 (513)
+..|++++.++|.+++++...+...+|+.+++++|++++|+|+.+.++.++. ..+..+++++..|.+++.+|++|+++.
T Consensus 235 ~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~~~~~ 313 (460)
T 3mkt_A 235 KELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQDTKGA 313 (460)
T ss_dssp SSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 3578999999999999999999999999999999999999999999999988 688999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHcCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCChhhHHHHH
Q 042512 128 GLTLQRTILLLLLSSIPIAFL-WLNMKTILLFCGQEQDIAHEAQIYLLYSLPDLIALSFLHPLRIYLRTQSITLPLTFCA 206 (513)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 206 (513)
++..+.+..+...++++++++ ..+.+++..++..+++..+.+..++++.++..++..+..+..+.+++.||++.++..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 393 (460)
T 3mkt_A 314 AIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAIFHRT 393 (460)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 999999999999999998877 8888899998888888888999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHhh----cC-CccchhHHHHHHHHHHHHHHHHHHHH
Q 042512 207 TFAI-ILHIPINYLLVSV----LN-LGLKGIALSSVWTNFNLVISLILYIM 251 (513)
Q Consensus 207 ~~~~-~~~i~~~~~li~~----~~-~g~~g~a~a~~~~~~~~~~~~~~~~~ 251 (513)
+++. ++++++++++... .+ +|+.|+++++.+++.+..++..++.+
T Consensus 394 ~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~~~~~~~ 444 (460)
T 3mkt_A 394 FISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRLY 444 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 8999999999875 56 99999999999999999887655443
No 3
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}
Probab=85.13 E-value=29 Score=33.72 Aligned_cols=57 Identities=5% Similarity=-0.077 Sum_probs=23.0
Q ss_pred HHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH
Q 042512 413 CGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFYSGFDFEGLWCGLLAAQGSCVVTM 470 (513)
Q Consensus 413 ~~~l~~~g~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~g~~g~~~a~~~~~~~~~~~~ 470 (513)
....-...+.......+.... +.......+.....+.+....+........+..++.
T Consensus 412 ~~~~p~~~~g~~~g~~~~~~~-~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (491)
T 4aps_A 412 TKLAPKAFNSQMMSMWFLSSS-VGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVL 468 (491)
T ss_dssp HHHTTTTCSSSSTHHHHHHHH-HHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 333333334444444444433 233333333333333454455544444444443333
No 4
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*
Probab=81.09 E-value=38 Score=32.13 Aligned_cols=41 Identities=7% Similarity=-0.061 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhHHHHHH
Q 042512 50 ARRIANIALPMILTGLLLYSRSMISMLFLGRLG--DLALAGGS 90 (513)
Q Consensus 50 ~~~i~~~~~p~~~~~~~~~l~~~~~~~~i~~lg--~~~~~~~~ 90 (513)
.+.+.....-.++..............+..++| +.+.+...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~ 67 (438)
T 3o7q_A 25 IIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQ 67 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 344444444444444444455555444444444 44555443
No 5
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=80.25 E-value=42 Score=32.00 Aligned_cols=22 Identities=14% Similarity=0.403 Sum_probs=11.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHH
Q 042512 450 FDFEGLWCGLLAAQGSCVVTML 471 (513)
Q Consensus 450 ~g~~g~~~a~~~~~~~~~~~~~ 471 (513)
.|....++...+..++..++..
T Consensus 410 ~g~~~~~~~~~~~~~~~~~~~~ 431 (451)
T 1pw4_A 410 FGWDGGFMVMIGGSILAVILLI 431 (451)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHH
Confidence 5666665555555444444433
No 6
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1
Probab=46.67 E-value=1.9e+02 Score=27.16 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 042512 51 RRIANIALPMILTGLLLYSRSMISMLFLGR 80 (513)
Q Consensus 51 ~~i~~~~~p~~~~~~~~~l~~~~~~~~i~~ 80 (513)
+.++...+..++..............++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (451)
T 1pw4_A 252 KLLWYIAIANVFVYLLRYGILDWSPTYLKE 281 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445544444444444333333334443
No 7
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=28.68 E-value=81 Score=19.11 Aligned_cols=8 Identities=13% Similarity=-0.110 Sum_probs=3.7
Q ss_pred HHHHHHhc
Q 042512 247 ILYIMISG 254 (513)
Q Consensus 247 ~~~~~~~~ 254 (513)
..|++|++
T Consensus 32 ~~~~RRR~ 39 (44)
T 2jwa_A 32 GILIKRRQ 39 (44)
T ss_dssp HHHHHHHC
T ss_pred Hhheehhh
Confidence 34555444
No 8
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=26.41 E-value=99 Score=28.50 Aligned_cols=25 Identities=20% Similarity=0.684 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccH
Q 042512 454 GLWCGLLAAQGSCVVTMLFVVARTDW 479 (513)
Q Consensus 454 g~~~a~~~~~~~~~~~~~~~~~~~~~ 479 (513)
|.|++ +...++.+++.++++||++|
T Consensus 314 gy~~~-l~~m~~~~~~~~~~fkrk~W 338 (339)
T 4ev6_A 314 GFWLV-MALMVVIIMIFVYIFRRSGW 338 (339)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHcCC
Confidence 33433 34445566666777888887
No 9
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=18.96 E-value=87 Score=18.23 Aligned_cols=26 Identities=8% Similarity=0.010 Sum_probs=0.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHh
Q 042512 228 LKGIALSSVWTNFNLVISLILYIMIS 253 (513)
Q Consensus 228 ~~g~a~a~~~~~~~~~~~~~~~~~~~ 253 (513)
+.|..++.+.+-.+...+.+++.+||
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeeehHHHHHHHHHHHHHHHHeecC
No 10
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=17.82 E-value=4.4e+02 Score=22.06 Aligned_cols=158 Identities=5% Similarity=-0.085 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHH
Q 042512 26 SKNPTTNQENNPNESTHLFLAIKEARRIANIALPMILTGLLLYSRSMISMLFLGR-LGDLALAGGSLAIGFGNITGYSLL 104 (513)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~~~~~~~~l~~~~~~~~i~~-lg~~~~~~~~~a~~~~~~~~~~~~ 104 (513)
+...++.+....-+.++....+...|..-+.+.-+..-......=-.++. .. +.+.-+.+|+....+.-.. ..+.
T Consensus 2 ~~~~~~~h~~~~l~~R~l~ls~aqLKA~S~lSALLaGFAMVAmVE~ql~~---~~~~p~~LLi~fav~Ttllv~v-ml~A 77 (214)
T 4hkr_A 2 SQSGEDLHSPTYLSWRKLQLSRAKLKASSKTSALLSGFAMVAMVEVQLDH---DTNVPPGMLIAFAICTTLLVAV-HMLA 77 (214)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CHHHHHHHHHHHHHH-HHHH
T ss_pred CcccccccChhhccHHHHHHHHHHHHHHHHHHHHHhccceeeEEEEeccC---CCCCChHHHHHHHHHHHHHHHH-HHHH
Q ss_pred HHHHHhHHHHHHhh--------hCcCChhHHHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHcCCCHHHHHHHHHHHHH
Q 042512 105 SGLAMGMETICGQA--------FGAARYKLLGLTLQRTILLLLLSSIPIAFL-WLNMKTILLFCGQEQDIAHEAQIYLLY 175 (513)
Q Consensus 105 ~gl~~~~~~~~s~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~i 175 (513)
.-+++-..|.+-.. ..+...++.+.++..+..++..+|+++.++ ....-|+=-+-..++..+..+...+..
T Consensus 78 lMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall~WVKF~~~~~~aa~~~t~vliPv 157 (214)
T 4hkr_A 78 LMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAILCWVKFYDLSRRAAWSATVVLIPV 157 (214)
T ss_dssp HHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTHHH
T ss_pred HHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheEEeecCCcHHHHHHHHHHHHH
Q ss_pred HhhhHHHHHHHH
Q 042512 176 SLPDLIALSFLH 187 (513)
Q Consensus 176 ~~~~~~~~~~~~ 187 (513)
....+.|...+.
T Consensus 158 ~i~F~~Fa~hFY 169 (214)
T 4hkr_A 158 MIIFMAFAIHFY 169 (214)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Done!