Query 042515
Match_columns 342
No_of_seqs 254 out of 1387
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:58:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06429 GT8_like_1 GT8_like_1 100.0 9.4E-51 2E-55 374.1 20.8 237 57-331 1-256 (257)
2 PRK15171 lipopolysaccharide 1, 100.0 4.5E-50 9.7E-55 383.5 19.1 264 55-335 24-290 (334)
3 PLN02718 Probable galacturonos 100.0 4.8E-49 1E-53 388.7 20.3 277 50-336 307-594 (603)
4 PLN02742 Probable galacturonos 100.0 3.6E-48 7.7E-53 378.0 21.2 277 50-336 221-526 (534)
5 PLN02829 Probable galacturonos 100.0 2.7E-48 5.8E-53 382.5 19.0 277 51-337 326-631 (639)
6 PLN02523 galacturonosyltransfe 100.0 7.8E-48 1.7E-52 375.9 21.4 277 50-336 242-550 (559)
7 PLN02910 polygalacturonate 4-a 100.0 9.5E-47 2.1E-51 371.0 19.2 277 50-336 339-648 (657)
8 cd06431 GT8_LARGE_C LARGE cata 100.0 2.2E-45 4.7E-50 342.9 18.1 262 57-335 3-272 (280)
9 PLN02870 Probable galacturonos 100.0 2.9E-45 6.4E-50 356.9 18.3 274 50-337 200-524 (533)
10 PLN02769 Probable galacturonos 100.0 1.6E-44 3.6E-49 358.0 19.8 271 50-336 324-621 (629)
11 PLN02659 Probable galacturonos 100.0 1.6E-44 3.4E-49 351.9 18.1 276 50-336 201-524 (534)
12 cd00505 Glyco_transf_8 Members 100.0 1E-43 2.2E-48 327.0 22.0 240 57-314 1-246 (246)
13 PLN02867 Probable galacturonos 100.0 4.1E-44 8.8E-49 350.3 18.3 274 50-336 205-526 (535)
14 COG1442 RfaJ Lipopolysaccharid 100.0 5.7E-44 1.2E-48 336.4 17.6 259 56-332 2-262 (325)
15 cd04194 GT8_A4GalT_like A4GalT 100.0 8.8E-44 1.9E-48 327.4 16.9 240 57-313 1-247 (248)
16 PF01501 Glyco_transf_8: Glyco 100.0 4.7E-41 1E-45 306.7 12.5 247 58-315 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 6.5E-39 1.4E-43 298.9 20.8 255 57-334 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 7E-38 1.5E-42 287.9 18.9 233 57-307 1-239 (248)
19 PLN00176 galactinol synthase 100.0 6.8E-30 1.5E-34 241.7 19.4 238 56-317 24-271 (333)
20 cd02537 GT8_Glycogenin Glycoge 100.0 2.6E-30 5.6E-35 237.0 15.6 212 59-318 4-218 (240)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 3.7E-24 8E-29 198.4 16.3 214 59-317 4-243 (278)
22 KOG1879 UDP-glucose:glycoprote 99.5 1.2E-14 2.7E-19 152.3 7.0 256 53-332 1178-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 98.9 2.8E-10 6.1E-15 104.5 0.7 164 141-329 155-353 (368)
24 PF03407 Nucleotid_trans: Nucl 97.3 0.0012 2.5E-08 59.1 8.8 139 142-307 52-201 (212)
25 PF11051 Mannosyl_trans3: Mann 97.1 0.0019 4.2E-08 60.3 8.3 110 59-179 4-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 96.0 0.019 4.1E-07 55.8 7.1 139 152-315 195-365 (429)
27 KOG1950 Glycosyl transferase, 90.2 0.32 6.8E-06 47.6 4.0 164 143-317 114-291 (369)
28 PF05637 Glyco_transf_34: gala 90.0 0.2 4.4E-06 45.9 2.2 147 142-307 60-231 (239)
29 cd02515 Glyco_transf_6 Glycosy 87.2 25 0.00055 32.7 15.4 200 56-282 35-247 (271)
30 PLN03181 glycosyltransferase; 82.7 2.5 5.5E-05 41.6 5.5 19 152-171 196-214 (453)
31 PF04765 DUF616: Protein of un 81.3 3.7 8E-05 39.0 5.9 48 142-190 140-189 (305)
32 PF03414 Glyco_transf_6: Glyco 78.9 64 0.0014 31.1 13.8 202 56-281 100-311 (337)
33 KOG1928 Alpha-1,4-N-acetylgluc 77.3 1.2 2.5E-05 43.3 1.3 19 160-178 242-260 (409)
34 PF00535 Glycos_transf_2: Glyc 69.2 57 0.0012 26.1 10.8 94 68-181 10-105 (169)
35 TIGR03111 glyc2_xrt_Gpos1 puta 67.6 67 0.0015 32.0 11.3 104 55-178 49-155 (439)
36 PF04488 Gly_transf_sug: Glyco 63.8 3.8 8.3E-05 32.1 1.3 31 141-176 66-97 (103)
37 cd06421 CESA_CelA_like CESA_Ce 62.5 97 0.0021 26.9 10.4 98 57-171 3-100 (234)
38 cd02514 GT13_GLCNAC-TI GT13_GL 59.7 73 0.0016 30.8 9.4 114 58-177 3-119 (334)
39 cd04190 Chitin_synth_C C-termi 59.2 20 0.00044 32.3 5.4 24 155-178 73-97 (244)
40 PF03071 GNT-I: GNT-I family; 58.1 85 0.0018 31.4 9.8 117 56-178 94-214 (434)
41 cd02510 pp-GalNAc-T pp-GalNAc- 57.7 65 0.0014 29.8 8.7 92 68-178 11-107 (299)
42 PRK05454 glucosyltransferase M 57.5 75 0.0016 33.9 9.9 121 55-189 124-255 (691)
43 cd06434 GT2_HAS Hyaluronan syn 56.4 1.3E+02 0.0028 26.2 10.1 99 57-178 2-101 (235)
44 cd04186 GT_2_like_c Subfamily 56.1 1.1E+02 0.0023 24.7 10.5 89 68-178 9-98 (166)
45 cd04192 GT_2_like_e Subfamily 55.4 81 0.0018 27.2 8.6 94 68-177 9-105 (229)
46 PF07801 DUF1647: Protein of u 55.2 64 0.0014 27.1 7.2 66 54-125 59-124 (142)
47 cd04191 Glucan_BSP_ModH Glucan 52.5 1.9E+02 0.0041 26.5 10.7 35 155-189 95-130 (254)
48 cd06439 CESA_like_1 CESA_like_ 52.5 1.7E+02 0.0036 25.9 10.6 104 55-178 29-133 (251)
49 cd06423 CESA_like CESA_like is 52.5 1.2E+02 0.0026 24.2 9.6 90 69-178 10-102 (180)
50 cd06435 CESA_NdvC_like NdvC_li 51.0 1.3E+02 0.0027 26.4 9.2 22 156-177 85-107 (236)
51 PRK15383 type III secretion sy 50.9 7 0.00015 35.7 0.9 23 157-179 220-242 (335)
52 PRK15382 non-LEE encoded effec 50.5 7.2 0.00016 35.7 0.9 24 156-179 211-234 (326)
53 PRK15384 type III secretion sy 50.5 6.9 0.00015 35.8 0.8 23 157-179 217-239 (336)
54 cd06427 CESA_like_2 CESA_like_ 49.1 1.8E+02 0.004 25.7 10.0 105 56-178 2-108 (241)
55 cd04195 GT2_AmsE_like GT2_AmsE 46.4 1.8E+02 0.0038 24.6 9.2 90 69-177 13-103 (201)
56 PF05704 Caps_synth: Capsular 45.2 53 0.0011 30.8 5.8 84 68-177 59-143 (276)
57 cd04184 GT2_RfbC_Mx_like Myxoc 45.1 1.5E+02 0.0033 25.0 8.5 100 57-177 3-106 (202)
58 PRK10018 putative glycosyl tra 43.6 2.7E+02 0.0059 25.8 11.4 103 55-178 5-109 (279)
59 PF03314 DUF273: Protein of un 43.4 18 0.00039 32.5 2.2 23 148-171 35-57 (222)
60 cd02520 Glucosylceramide_synth 43.2 2.1E+02 0.0045 24.4 10.6 104 57-177 3-109 (196)
61 PF13896 Glyco_transf_49: Glyc 43.0 46 0.00099 31.8 5.2 121 55-177 25-149 (317)
62 cd00761 Glyco_tranf_GTA_type G 42.2 1.6E+02 0.0034 22.7 9.4 30 68-99 9-38 (156)
63 cd04196 GT_2_like_d Subfamily 41.6 2.2E+02 0.0047 24.1 9.4 90 69-178 11-103 (214)
64 PRK11204 N-glycosyltransferase 36.9 2.9E+02 0.0063 26.9 10.0 102 55-178 54-158 (420)
65 PF11397 GlcNAc: Glycosyltrans 35.5 2.2E+02 0.0049 27.5 8.6 34 141-175 103-136 (343)
66 PF11735 CAP59_mtransfer: Cryp 30.6 2.1E+02 0.0046 26.2 7.2 25 155-180 112-137 (241)
67 TIGR03472 HpnI hopanoid biosyn 29.1 4.4E+02 0.0096 25.4 9.7 102 55-173 41-144 (373)
68 cd06422 NTP_transferase_like_1 28.9 1.7E+02 0.0036 25.6 6.2 23 157-179 98-120 (221)
69 PF10111 Glyco_tranf_2_2: Glyc 27.3 4.9E+02 0.011 23.9 10.3 94 69-177 17-111 (281)
70 cd06913 beta3GnTL1_like Beta 1 27.0 4.1E+02 0.0088 22.8 9.3 97 68-178 9-108 (219)
71 KOG4748 Subunit of Golgi manno 26.1 72 0.0016 31.1 3.4 145 152-308 173-333 (364)
72 cd02525 Succinoglycan_BP_ExoA 24.6 4.6E+02 0.01 22.6 9.7 100 57-178 2-105 (249)
73 CHL00031 psbT photosystem II p 24.2 43 0.00094 20.7 1.0 11 26-36 22-32 (33)
74 PF13641 Glyco_tranf_2_3: Glyc 23.4 1.2E+02 0.0026 26.3 4.3 104 57-178 3-110 (228)
75 PRK10063 putative glycosyl tra 22.8 5.5E+02 0.012 23.1 8.6 20 156-175 83-102 (248)
76 PRK14583 hmsR N-glycosyltransf 22.2 7.7E+02 0.017 24.4 10.2 101 55-177 75-178 (444)
77 KOG3737 Predicted polypeptide 20.4 3.6E+02 0.0079 26.8 6.9 96 56-171 156-256 (603)
No 1
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=9.4e-51 Score=374.09 Aligned_cols=237 Identities=30% Similarity=0.576 Sum_probs=195.1
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecCccccCccchh---
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYS--- 132 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~i~~~--- 132 (342)
+|||+++| ||+ ++++++.|++.|+++|++++|||++++.+.+.+++..... ..+.+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 78 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLM 78 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhh
Confidence 69999999 999 5788889999999887899999999999987777665432 23678999999866554332211
Q ss_pred -------------hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCccccc
Q 042515 133 -------------IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYF 199 (342)
Q Consensus 133 -------------~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~ 199 (342)
.+.++.++++|+||++|++|| +++||||||+|+||++||++||++|++|+++||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--------- 148 (257)
T cd06429 79 QLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--------- 148 (257)
T ss_pred hhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence 133567889999999999999 599999999999999999999999999999999853
Q ss_pred CccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccc--ccccCCCcchhhhhhcCceEecCcc
Q 042515 200 TSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKY--RIYELGSLPPFLLVFAGDVEGVEHR 277 (342)
Q Consensus 200 ~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~--~~~~~~DQd~lN~vf~~~i~~L~~~ 277 (342)
||||||||||+++||+.++++++++|++...+. ..+.++|||++|++|.|+++.||++
T Consensus 149 --------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~ 208 (257)
T cd06429 149 --------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPS 208 (257)
T ss_pred --------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChH
Confidence 899999999999999999999999999865432 3467789999999999999999999
Q ss_pred ccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCccccccccc
Q 042515 278 WNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYD 331 (342)
Q Consensus 278 wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~ 331 (342)
||+++++++.... .. ...+++||||+|+.|||+..+. .+++++||.|.
T Consensus 209 wN~~~l~~~~~~~--~~-~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 209 WHVRGLGYNYGIR--PQ-DIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred HcccCCccccccc--cc-ccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 9998776543211 11 1247799999999999998754 25899999984
No 2
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=4.5e-50 Score=383.51 Aligned_cols=264 Identities=18% Similarity=0.294 Sum_probs=195.7
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHH--HHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSR--TITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~--~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
+.||||+++|++|+++++|+|.||++|+++ ..++|||++++++.+..+. .+.+.++ .+++++.+|.+.+.+..+.
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~- 100 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPST- 100 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCccc-
Confidence 689999999999999999999999999864 5799999999998765432 2333453 4788999987766654332
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEee-cccccCcccccCccCCCCccccC
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAP-EYCHANFTNYFTSKFWSNPVFSG 211 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~-~d~~~~~~~~~~~~~w~~~~~~~ 211 (342)
.+.+.++|+||++|++||++++||||||+|+||++||++||++|+++..+||+ .+.... +|.+.....
T Consensus 101 ---~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~--------~~~~~~~~l 169 (334)
T PRK15171 101 ---KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE--------WWSKRAQSL 169 (334)
T ss_pred ---CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh--------HHHHHHHhc
Confidence 35667899999999999977999999999999999999999999995555554 443211 122221111
Q ss_pred CCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCCccccc
Q 042515 212 TVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGL 291 (342)
Q Consensus 212 ~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~ 291 (342)
+..+....|||||||||||++||+.++++++++++........+.++|||+||.+|.|+++.||.+||++..........
T Consensus 170 ~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~~~ 249 (334)
T PRK15171 170 QTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELKDS 249 (334)
T ss_pred CCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHHhc
Confidence 11111246999999999999999999999999998753211223468999999999999999999999874211111111
Q ss_pred cccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCC
Q 042515 292 CRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRH 335 (342)
Q Consensus 292 ~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 335 (342)
+......+++||||+|+.|||+.... +|+..+|+.|....+
T Consensus 250 ~~~~~~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp 290 (334)
T PRK15171 250 VINPVNDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP 290 (334)
T ss_pred ccccccCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence 11111246799999999999987543 367888888877653
No 3
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=4.8e-49 Score=388.70 Aligned_cols=277 Identities=27% Similarity=0.507 Sum_probs=215.9
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCC-CccEEEEEecC-ccccC
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFP-YLNFEIYRFDT-NLVKG 127 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p-~~~~~~~~~d~-~~~~~ 127 (342)
...|++.+|||+++|. |+ +++|+|.|++.|+..++.++|||++++++.+.++.+.....+ +..++++.+|. ..+..
T Consensus 307 ~l~d~~~~Hia~~sDN-vl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~ 384 (603)
T PLN02718 307 RYNDPDLYHYVVFSDN-VL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPA 384 (603)
T ss_pred hccCCcceeEEEEcCC-ce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccc
Confidence 3458899999999996 64 899999999999777788999999999998776644332222 46788888763 11211
Q ss_pred ccch------hhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccC-
Q 042515 128 KISY------SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFT- 200 (342)
Q Consensus 128 ~i~~------~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~- 200 (342)
.... +.+..+.++++|+||++|++|| +++||||||+|+||++||++||++|++|+++||+++|..++..+..
T Consensus 385 ~~~~~lk~l~s~~~~~~S~~~y~Rl~ipellp-~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~ 463 (603)
T PLN02718 385 DYNSLLMKQNSHDPRYISALNHARFYLPDIFP-GLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSM 463 (603)
T ss_pred cchhhhhhccccccccccHHHHHHHHHHHHhc-ccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhh
Confidence 1111 1122466789999999999999 5999999999999999999999999999999999999653211111
Q ss_pred --ccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccc
Q 042515 201 --SKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRW 278 (342)
Q Consensus 201 --~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~w 278 (342)
...+++|.....+ ..+.||||+|||||||++||+.++++++.+|++.+.+..+|++++++++|++|.|+++.||++|
T Consensus 464 ~~~lnfs~p~i~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rW 542 (603)
T PLN02718 464 DTFINFSDPWVAKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRW 542 (603)
T ss_pred hhhhhccchhhhccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHH
Confidence 1123444333344 3468999999999999999999999999999987665567777777888899999999999999
Q ss_pred cccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCC
Q 042515 279 NQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHK 336 (342)
Q Consensus 279 N~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 336 (342)
|+.++|++.....+ ...+++||||+|+.|||...+..+ |..+|.+|..+.++
T Consensus 543 Nv~gLG~~~~i~~~---~i~~aaIIHYnG~~KPWle~~i~~---yr~~W~k~v~~~~~ 594 (603)
T PLN02718 543 HVLGLGHESGVGAS---DIEQAAVIHYDGVMKPWLDIGIGK---YKRYWNIHVPYHHP 594 (603)
T ss_pred hccCcccccccccc---ccCCCEEEEECCCCCccccCChhh---HHHHHHhhcCCCCh
Confidence 99998865422211 235779999999999999987764 89999999998876
No 4
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=3.6e-48 Score=378.04 Aligned_cols=277 Identities=27% Similarity=0.529 Sum_probs=227.3
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccccC
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVKG 127 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~ 127 (342)
...|++-.|.|+.+| |-+ .+.|+|.|...|+.+|+++.|||+||..+...++.++... ++.+.++++.++. ..+.+
T Consensus 221 ~l~d~~l~Hy~ifSd-Nvl-AasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~ 298 (534)
T PLN02742 221 RLVDNNLYHFCVFSD-NIL-ATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNA 298 (534)
T ss_pred cccCCCcceEEEEec-cch-hhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEecccccccc
Confidence 445889999999998 554 7889999999999999999999999998877777766543 5566788887764 22222
Q ss_pred ccch---------------------------hhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHcccc
Q 042515 128 KISY---------------------------SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINL 180 (342)
Q Consensus 128 ~i~~---------------------------~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl 180 (342)
.++. .-+.++.++.+|+||+||++|| +++||||||+|+||++||++||++||
T Consensus 299 ~~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvVV~~DL~eL~~~DL 377 (534)
T PLN02742 299 SYVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVVVQKDLTPLFSIDL 377 (534)
T ss_pred ccchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEEecCChHHHhcCCC
Confidence 1100 0113566789999999999999 59999999999999999999999999
Q ss_pred CCCeEEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCc
Q 042515 181 RGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSL 260 (342)
Q Consensus 181 ~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQ 260 (342)
+|+++||++||..++..|.+..+|++|.++..+. .+.||||+|||||||++||++++++.+..|++.+.+.++|++|.+
T Consensus 378 ~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~-~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaL 456 (534)
T PLN02742 378 HGNVNGAVETCLETFHRYHKYLNFSHPLISSHFD-PDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTL 456 (534)
T ss_pred CCCEEEEeCchhhhhhhhhhhhcccchhhhccCC-CCccccccCcEEEeHHHHHhhcHHHHHHHHHHhcccccccccccc
Confidence 9999999999987777777666788887776664 468999999999999999999999988888887666778888889
Q ss_pred chhhhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCC
Q 042515 261 PPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHK 336 (342)
Q Consensus 261 d~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 336 (342)
++++++|.|++++||++||+.++|++.... +.. ..++.||||+|+.|||...+..+ +..+|++|..+.++
T Consensus 457 pp~LLaF~g~~~~LD~rWNv~gLG~~~~v~-~~~--i~~aaILHynG~~KPWl~~~i~~---yr~~W~kYl~~s~~ 526 (534)
T PLN02742 457 PPGLLTFYGLTEPLDRRWHVLGLGYDTNID-PRL--IESAAVLHFNGNMKPWLKLAIER---YKPLWERYVNYSHP 526 (534)
T ss_pred chHHHHHcCcceecChhheecccccccccc-hhh--ccCCeEEEECCCCCcccccCCcc---cchHHHHHHccCCH
Confidence 999999999999999999999998752111 111 24679999999999999987653 88999999998776
No 5
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=2.7e-48 Score=382.52 Aligned_cols=277 Identities=25% Similarity=0.502 Sum_probs=219.7
Q ss_pred CCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccccCc
Q 042515 51 SHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVKGK 128 (342)
Q Consensus 51 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~~ 128 (342)
..|++-.|.|+.+| |-| .+.|.+.|.+.|+..|+++.|||++|..+-..++.++... +....+++..++. ..+..-
T Consensus 326 l~dp~l~Hy~ifSd-NVL-AasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~ 403 (639)
T PLN02829 326 LEDPQLYHYALFSD-NVL-AAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSS 403 (639)
T ss_pred ccCCccceEEEEec-cee-EEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhccccccc
Confidence 45888999999998 655 6678999999999999999999999998876666655422 2233455544431 111000
Q ss_pred -------c-ch-------------------hhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccC
Q 042515 129 -------I-SY-------------------SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR 181 (342)
Q Consensus 129 -------i-~~-------------------~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~ 181 (342)
+ +. ..+..+.+.++|+||+||++|| +++||||||+|+||++||++||++||+
T Consensus 404 ~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~ 482 (639)
T PLN02829 404 YSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLK 482 (639)
T ss_pred ccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCC
Confidence 0 00 0113456778999999999999 599999999999999999999999999
Q ss_pred CCeEEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcc
Q 042515 182 GRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLP 261 (342)
Q Consensus 182 ~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd 261 (342)
|+++||+++|..++..+.....|++|.....|. ...||||+|||||||++||+.+++++++.|++.+....+|++|.++
T Consensus 483 gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLP 561 (639)
T PLN02829 483 GNVNGAVETCGESFHRFDRYLNFSNPLISKNFD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLP 561 (639)
T ss_pred CceEEEeccchhhhhhhhhhhhccchHhhhccC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCC
Confidence 999999999987666555555677776665554 3689999999999999999999999999999877666788888899
Q ss_pred hhhhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCCC
Q 042515 262 PFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHKS 337 (342)
Q Consensus 262 ~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 337 (342)
++.++|.|++++||++||++++|++. ...+..+ .+++||||+|+.|||...+.. +|+.+|.+|..+.++.
T Consensus 562 p~Ll~F~g~i~~LD~rWNv~GLGy~~-~v~~~~i--~~aaIIHynG~~KPWle~~i~---~yr~lW~kYl~~~~~f 631 (639)
T PLN02829 562 PGLITFWKRTYPLDRSWHVLGLGYNP-NVNQRDI--ERAAVIHYNGNMKPWLEIGIP---KYRNYWSKYVDYDQVY 631 (639)
T ss_pred hHHHHhcCceEecChhheecCCCCCc-ccchhcc--cCCeEEEECCCCCccccCCcc---cchHHHHHHHhcCchH
Confidence 98999999999999999999998752 1222223 466999999999999998865 4999999999988763
No 6
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=7.8e-48 Score=375.95 Aligned_cols=277 Identities=25% Similarity=0.541 Sum_probs=211.5
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccccC
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVKG 127 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~ 127 (342)
...|++-.|+|+.+|. +.+++|+|.|++.|++.|++++|||++++++...++.+.... ..+..++++.++. +.+..
T Consensus 242 ~l~dp~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~ 319 (559)
T PLN02523 242 ELEDPSLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNS 319 (559)
T ss_pred hccCCCcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhccc
Confidence 4568899999999996 889999999999999989999999999999977777665432 2256677777764 22210
Q ss_pred c-------cch------------------h----hh-hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHc
Q 042515 128 K-------ISY------------------S----IR-QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWS 177 (342)
Q Consensus 128 ~-------i~~------------------~----~~-~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~ 177 (342)
- ... . .+ ..+.++++|+||+||++|| +++||||||+|+||++||++||+
T Consensus 320 ~~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP-~ldKVLYLD~DVVVq~DLseLw~ 398 (559)
T PLN02523 320 SYVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYP-KLHRILFLDDDVVVQKDLTGLWK 398 (559)
T ss_pred ccchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEecCCHHHHHh
Confidence 0 000 0 00 1346778999999999999 59999999999999999999999
Q ss_pred cccCCCeEEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccC
Q 042515 178 INLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYEL 257 (342)
Q Consensus 178 ~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~ 257 (342)
+||+|+++||++||...+..+.....+++|.....| ..+.||||+|||||||++||++++++++..|++.+.+..+|++
T Consensus 399 iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yF-Ns~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dq 477 (559)
T PLN02523 399 IDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKF-NPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKL 477 (559)
T ss_pred CcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCc-CCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccc
Confidence 999999999999985433332222223444443334 3468999999999999999999999999877765444555655
Q ss_pred CCcchhhhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCC
Q 042515 258 GSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHK 336 (342)
Q Consensus 258 ~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 336 (342)
+.+++.|++|.|++++||.+||+.++|++.... .+ ...+++||||+|+.|||...+.. ++..+|++|..+.++
T Consensus 478 daLpp~LivF~gri~~LD~rWNvlglGy~~~i~--~~-~i~~paIIHYnG~~KPWle~~i~---~yr~~W~kYl~~~~~ 550 (559)
T PLN02523 478 GTLPPGLITFYSTTKPLDKSWHVLGLGYNPSIS--MD-EIRNAAVIHFNGNMKPWLDIAMN---QFKPLWTKYVDYDME 550 (559)
T ss_pred cccchHHHHhcCceEecCchhhccCCccCCCcc--cc-ccCCCEEEEECCCCCccccCCCC---cchHHHHHHHccCCH
Confidence 566666799999999999999999887642111 11 12467999999999999876653 489999999988775
No 7
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=9.5e-47 Score=370.99 Aligned_cols=277 Identities=26% Similarity=0.505 Sum_probs=220.3
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-cccc-
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVK- 126 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~- 126 (342)
...|++-.|.|+.+| |-| .+.|.+.|.+.|+..|+++.|||+||..+-..++.++... +....+++..++. ..+.
T Consensus 339 ~l~dp~l~Hy~ifSD-NVL-AaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~ 416 (657)
T PLN02910 339 KLEDPSLYHYAIFSD-NVL-ATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNS 416 (657)
T ss_pred hccCCcceeEEEEec-cee-eEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccc
Confidence 345888999999998 655 6778999999999999999999999998876666655321 2233444444321 0000
Q ss_pred ----------C-----------ccch--------hhh-hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHH
Q 042515 127 ----------G-----------KISY--------SIR-QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLW 176 (342)
Q Consensus 127 ----------~-----------~i~~--------~~~-~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~ 176 (342)
. .... ..| ..+.++++|+||+||++|| +++||||||+|+||++||++||
T Consensus 417 ~~~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~DVVV~gDLseLw 495 (657)
T PLN02910 417 SYCSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYP-KLEKILFLDDDIVVQKDLTPLW 495 (657)
T ss_pred cccHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCchHHHH
Confidence 0 0000 001 3456778999999999999 5999999999999999999999
Q ss_pred ccccCCCeEEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccccccc
Q 042515 177 SINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYE 256 (342)
Q Consensus 177 ~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~ 256 (342)
++||+|+++||+++|..++..+.....|++|.+...|. ...||||+|||||||++||+.++++.+..|++.+.+..+|+
T Consensus 496 ~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFN-s~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~d 574 (657)
T PLN02910 496 SIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFD-PNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWK 574 (657)
T ss_pred hCCcCCceEEEecccchhhhhhhhhhccCChhhhhccC-CCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccc
Confidence 99999999999999987766666666778887766564 47899999999999999999999998888888777777888
Q ss_pred CCCcchhhhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCC
Q 042515 257 LGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHK 336 (342)
Q Consensus 257 ~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 336 (342)
+|.++++.++|.|++++||++||++++|++.....+ ...+++||||+|+.|||...+.. +|..+|.+|..+.++
T Consensus 575 qgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~---~i~~AAVLHynG~~KPWl~l~i~---~Yr~~W~kYl~~d~~ 648 (657)
T PLN02910 575 LGSLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQT---EIENAAVVHYNGNYKPWLDLAIA---KYKPYWSRYVQYDNP 648 (657)
T ss_pred cCCCChHHHHHhCceeecCchheecCCCCCcccccc---cccCcEEEEeCCCCCcccccCcc---cchHHHHHHccCCCh
Confidence 888888889999999999999999999987544333 22468999999999999998875 499999999888765
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.2e-45 Score=342.87 Aligned_cols=262 Identities=20% Similarity=0.321 Sum_probs=184.2
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecCccccCccchhhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~i~~~~~~ 135 (342)
+.||+|. .+|+++++|+|+||+.|+. ..++|||++++.+.+.++++.+.. ..+.++.++.++. ....+......
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~--~~~~~~~~~~~ 77 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEE--LKSRVSWIPNK 77 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHH--hhhhhccCccc
Confidence 4566777 7999999999999999975 569999999999877665544322 2355677777652 11111110001
Q ss_pred hhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHcc--ccC-CCeEEeecccccCcccccCccCCCCccccCC
Q 042515 136 ALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSI--NLR-GRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 136 ~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~--dl~-~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
+.....+|+||++|++||++++||||||+|+||++||++||++ ++. ++++||+++.. .++....|... ..
T Consensus 78 ~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~~~---~~ 150 (280)
T cd06431 78 HYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWKNH---RP 150 (280)
T ss_pred chhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhhcc---CC
Confidence 1222247899999999997799999999999999999999998 575 56777777531 12221111110 01
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcc-cccccCCCcchhhhhhcCc---eEecCccccccCCCCCcc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKK-YRIYELGSLPPFLLVFAGD---VEGVEHRWNQHGLGGDNL 288 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~-~~~~~~~DQd~lN~vf~~~---i~~L~~~wN~~~~~~~~~ 288 (342)
..+ ...|||||||||||++||+.++++++....++... .....++|||+||.+|.++ ++.||++||++... ...
T Consensus 151 ~~~-~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~-~~~ 228 (280)
T cd06431 151 WPA-LGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSD-HTR 228 (280)
T ss_pred Ccc-cccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCc-cch
Confidence 111 12499999999999999999999998766654311 1123579999999999999 89999999998432 111
Q ss_pred ccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCC
Q 042515 289 EGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRH 335 (342)
Q Consensus 289 ~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 335 (342)
...++. ....++||||+|+.|||...+.. .+++++|..|..+..
T Consensus 229 ~~~~~~-~~~~p~IIHf~g~~KPW~~~~~~--~~~~~~~~~~~~~~~ 272 (280)
T cd06431 229 SEQCYR-DVSDLKVIHWNSPKKLRVKNKHV--EFFRNLYLTFLEYDG 272 (280)
T ss_pred HhHhhc-CcCCCEEEEeCCCCCCCCcCCCC--hHHHHHHHHHHhcCc
Confidence 112221 23578999999999999876543 269999999998874
No 9
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=2.9e-45 Score=356.91 Aligned_cols=274 Identities=26% Similarity=0.526 Sum_probs=206.8
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccccC
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVKG 127 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~ 127 (342)
...|++-.|.|+.+| |-+ .+.|.+.|.+.|+..|+++.|||+||..+-..++.++... +....+++..++. +.+..
T Consensus 200 ~l~dp~~~Hy~ifSd-NvL-AasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~ 277 (533)
T PLN02870 200 VLSDNSYHHFVLSTD-NIL-AASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTR 277 (533)
T ss_pred cccCCcceeEEEEec-cee-EEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhcccccc
Confidence 456889999999998 555 6678999999999999999999999998876666555321 2233344443321 00000
Q ss_pred -----------------------cc----ch-----------hhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEe
Q 042515 128 -----------------------KI----SY-----------SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVV 169 (342)
Q Consensus 128 -----------------------~i----~~-----------~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~ 169 (342)
.. +. ..+..+.++++|+||+||++|| +++||||||+|+||+
T Consensus 278 ~~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVq 356 (533)
T PLN02870 278 ENVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQ 356 (533)
T ss_pred ccchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEec
Confidence 00 00 0123456779999999999999 699999999999999
Q ss_pred cchHHHHccccCCCeEEeeccccc--------CcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHH
Q 042515 170 DDVAKLWSINLRGRVLGAPEYCHA--------NFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEK 241 (342)
Q Consensus 170 ~Di~~L~~~dl~~~~iaA~~d~~~--------~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~ 241 (342)
+||++||++||+|+++||+++|.. .+..|++ +++|.....+. .+.||||||||||||++||+.+++++
T Consensus 357 gDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i~~~fd-~~~cyfNSGVlLINL~~WRe~nITek 432 (533)
T PLN02870 357 RDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFN---FSHPLIAKNLD-PEECAWAYGMNIFDLRAWRKTNIRET 432 (533)
T ss_pred CcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcc---cccchhhcccC-cccceeeccchhccHHHHHHcChHHH
Confidence 999999999999999999999843 1223443 45666665664 46899999999999999999999999
Q ss_pred HHHHHHHhcccccccCCCcchh---hhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCC
Q 042515 242 LEYWMRVQKKYRIYELGSLPPF---LLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSK 318 (342)
Q Consensus 242 ~~~~~~~~~~~~~~~~~DQd~l---N~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~ 318 (342)
+++|++++.... +.+.||++| |++|.|++++||.+||+.++|++.- ... . ...+++||||+|+.|||+..+..
T Consensus 433 ~~~~l~~n~~~~-l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~-~~~-~-~i~~aaIIHY~G~~KPW~~~~~~ 508 (533)
T PLN02870 433 YHSWLKENLKSN-LTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK-TNI-E-SVKKAAVIHYNGQSKPWLEIGFE 508 (533)
T ss_pred HHHHHHhhhhcC-ceecccccccHhHHHhcCceEECChHHhcCCCCCccc-ccc-c-ccCCcEEEEECCCCCCccccCcc
Confidence 999998653222 124577766 7999999999999999998886431 111 1 22467999999999999987764
Q ss_pred CCCCcccccccccccCCCC
Q 042515 319 KPCPLDSLWAPYDLFRHKS 337 (342)
Q Consensus 319 ~~~~~~~lW~~Y~~~~~~~ 337 (342)
+++.+|.+|..+.++.
T Consensus 509 ---~yr~~W~kYl~~s~~f 524 (533)
T PLN02870 509 ---HLRPFWTKYVNYSNDF 524 (533)
T ss_pred ---chhHHHHHHHccCchH
Confidence 4899999999988763
No 10
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=1.6e-44 Score=358.01 Aligned_cols=271 Identities=21% Similarity=0.409 Sum_probs=205.2
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecCcccc--
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVK-- 126 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~~~~~-- 126 (342)
...|++-.|.|+.+| |-+ .+.|+|.|...|+..|+++.|||++|..+...++.++... +....+++..++.-.+.
T Consensus 324 ~l~d~~l~Hy~ifSd-Nvl-AasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~ 401 (629)
T PLN02769 324 KFSDPSLRHYVIFSK-NVL-AASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDL 401 (629)
T ss_pred hccCCccceEEEEec-cce-eeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeeccc
Confidence 345888999999998 555 6789999999999999999999999998776676665432 22323433333211000
Q ss_pred --------------------Cccc--hhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCe
Q 042515 127 --------------------GKIS--YSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRV 184 (342)
Q Consensus 127 --------------------~~i~--~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~ 184 (342)
+..+ ...+..+.++++|+||+||++|| +++||||||+|+||++||++||++||+|++
T Consensus 402 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkv 480 (629)
T PLN02769 402 DKFALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLSFLWNLDMGGKV 480 (629)
T ss_pred chHHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhcCCCCCCe
Confidence 0001 11134567889999999999999 599999999999999999999999999999
Q ss_pred EEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcc--cccccCCCcch
Q 042515 185 LGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKK--YRIYELGSLPP 262 (342)
Q Consensus 185 iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~--~~~~~~~DQd~ 262 (342)
+||+++|...+..+.. |-+ ...| ..+.||||+|||||||++||+.+++++++.|++.... ...+..++|++
T Consensus 481 iAAVedc~~rl~~~~~---yl~---~~~F-~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~ 553 (629)
T PLN02769 481 NGAVQFCGVRLGQLKN---YLG---DTNF-DTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPA 553 (629)
T ss_pred EEEehhhhhhhhhhhh---hhc---ccCC-CccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCH
Confidence 9999998543322110 000 1123 3468999999999999999999999999999876432 34567789999
Q ss_pred hhhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCCC
Q 042515 263 FLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHK 336 (342)
Q Consensus 263 lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~ 336 (342)
+|++|.|+++.||.+||++++|++.... ... ..+++||||+|+.|||...+.. ++.++|+.|..+.++
T Consensus 554 lnlvF~g~v~~LD~rWNv~gLG~~~~i~--~~~-i~~paIIHYnG~~KPW~e~~i~---~yr~~W~kYl~~~~~ 621 (629)
T PLN02769 554 SLLTFQDLIYPLDDRWVLSGLGHDYGID--EQA-IKKAAVLHYNGNMKPWLELGIP---KYKKYWKRFLNRDDR 621 (629)
T ss_pred HHHHhcCeEEECCHHHcccccccccccc--ccc-cCCcEEEEECCCCCCccCCCCC---hHHHHHHHHhccCCh
Confidence 9999999999999999999888643111 111 2477999999999999987653 589999999988765
No 11
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=1.6e-44 Score=351.86 Aligned_cols=276 Identities=24% Similarity=0.484 Sum_probs=203.6
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccc--
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLV-- 125 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~-- 125 (342)
...|++-.|.|+.+| |-+ .+.|.+.|.+.|+..|+++.|||+||..+-..++.++... +....+++..++. +.+
T Consensus 201 ~l~d~~l~Hy~ifSd-NvL-AasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~ 278 (534)
T PLN02659 201 ALVDNSYFHFVLASD-NIL-AASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAK 278 (534)
T ss_pred ccCCCCcceEEEEec-cee-EEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccc
Confidence 456888999999998 555 6778999999999999999999999998876666655321 2233444444321 100
Q ss_pred ---------cC------cc--------ch-------------hhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEe
Q 042515 126 ---------KG------KI--------SY-------------SIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVV 169 (342)
Q Consensus 126 ---------~~------~i--------~~-------------~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~ 169 (342)
+. .+ +. ..+..+.+-++|+||+||++|| +++||||||+|+||+
T Consensus 279 ~~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVq 357 (534)
T PLN02659 279 GKVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQ 357 (534)
T ss_pred cccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEc
Confidence 00 00 00 0112334558999999999999 599999999999999
Q ss_pred cchHHHHccccCCCeEEeecccccC--c---ccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHH
Q 042515 170 DDVAKLWSINLRGRVLGAPEYCHAN--F---TNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEY 244 (342)
Q Consensus 170 ~Di~~L~~~dl~~~~iaA~~d~~~~--~---~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~ 244 (342)
+||++||++||+|+++||++||... + ..+.....+++|.+...| +.+.||||+|||||||++||+.++++++++
T Consensus 358 gDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yF-n~~~cYfNsGVlLINLk~WRe~nITek~l~ 436 (534)
T PLN02659 358 TDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNF-DPNECAWAYGMNIFDLEAWRKTNISSTYHH 436 (534)
T ss_pred CchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhcc-CccccceecceeEeeHHHHHhcChHHHHHH
Confidence 9999999999999999999998431 1 111111123334444434 335899999999999999999999999999
Q ss_pred HHHHhcccccccCCCcchh---hhhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCC
Q 042515 245 WMRVQKKYRIYELGSLPPF---LLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPC 321 (342)
Q Consensus 245 ~~~~~~~~~~~~~~DQd~l---N~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~ 321 (342)
|++++..... .+.||++| |++|.|++++||.+||+.++|++.-.. +. ...+++||||+|+.|||+..+..
T Consensus 437 ~l~~n~~~~l-~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~~--~~-~i~~paIIHYnG~~KPW~~~~~~--- 509 (534)
T PLN02659 437 WLEENLKSDL-SLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTS--LA-DAESAGVVHFNGRAKPWLDIAFP--- 509 (534)
T ss_pred HHHhcccccc-cccccccchHHHHHhcCCEEECChhheecCCccccccc--cc-ccCCcEEEEECCCCCccccccCC---
Confidence 9986532222 34577777 699999999999999999887642111 11 22577999999999999998765
Q ss_pred CcccccccccccCCC
Q 042515 322 PLDSLWAPYDLFRHK 336 (342)
Q Consensus 322 ~~~~lW~~Y~~~~~~ 336 (342)
++..+|.+|..+.++
T Consensus 510 ~yr~~W~kYl~~s~~ 524 (534)
T PLN02659 510 QLRPLWAKYIDSSDK 524 (534)
T ss_pred cchhHHHHHhccCCH
Confidence 599999999998776
No 12
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=1e-43 Score=326.97 Aligned_cols=240 Identities=23% Similarity=0.336 Sum_probs=176.6
Q ss_pred ceEEEEeCc-chhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh--CCCccEEEEEecCccccCccchhh
Q 042515 57 IHISMTLDS-TYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT--FPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 57 i~I~~~~D~-~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~--~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
|||++++++ +|+++++|+++||++|++. .++|||++++++.+. ++.|.+. -.+.+++++.++.........
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~-~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~--- 74 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTF-KAALDNLRKLYNFNYELIPVDILDSVDSEH--- 74 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHH-HHHHHHHHhccCceEEEEeccccCcchhhh---
Confidence 688877655 9999999999999999874 699999999988754 3344332 124567777776433222111
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCC
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTV 213 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~ 213 (342)
...+.++.+|+||++|+++| +++||||||+|+||++||++||+++++++.+||+.++...... ..+. .....
T Consensus 75 ~~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~----~~~~---~~~~~ 146 (246)
T cd00505 75 LKRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREG----KYYR---QKRSH 146 (246)
T ss_pred hcCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhcc----chhh---cccCC
Confidence 12355778999999999999 7999999999999999999999999999999999887532110 0010 01111
Q ss_pred CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCc---eEecCccccccCCCCCcccc
Q 042515 214 KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGD---VEGVEHRWNQHGLGGDNLEG 290 (342)
Q Consensus 214 ~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~---i~~L~~~wN~~~~~~~~~~~ 290 (342)
..+.+||||||||||+++||++++.++++++...+.. ....+|||+||.+|.++ ++.||++||++..+.....
T Consensus 147 -~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~- 222 (246)
T cd00505 147 -LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLS--SLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL- 222 (246)
T ss_pred -CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcc--cCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc-
Confidence 2245799999999999999988888887776553322 23569999999999998 9999999999865432211
Q ss_pred ccccCCCCCcEEEeccCCCCCCcc
Q 042515 291 LCRNLHPGPVSLLHWSGKGKPWLR 314 (342)
Q Consensus 291 ~~~~~~~~~~~IiHy~g~~KPW~~ 314 (342)
.|......+++||||+|+.|||++
T Consensus 223 ~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 223 NCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred cchhhhcCCCEEEEeCCCCCCCCC
Confidence 121112357899999999999974
No 13
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=4.1e-44 Score=350.33 Aligned_cols=274 Identities=27% Similarity=0.535 Sum_probs=203.1
Q ss_pred CCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecC-ccccC
Q 042515 50 RSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDT-NLVKG 127 (342)
Q Consensus 50 ~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~-~~~~~ 127 (342)
...|++-.|.|+.+| |-+ .+.|.+.|.+.|+..|+++.|||+||..+-..++.++... +....+++..++. ..+..
T Consensus 205 ~l~d~~~~Hy~ifSd-NvL-AasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~ 282 (535)
T PLN02867 205 RLTDPSFHHVVLLTD-NVL-AASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQE 282 (535)
T ss_pred hccCCCcceEEEEec-cee-EEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhcccccc
Confidence 456889999999998 555 6778999999999999999999999998876666555321 2233444443321 10000
Q ss_pred c-c----------------------------------chhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecch
Q 042515 128 K-I----------------------------------SYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDV 172 (342)
Q Consensus 128 ~-i----------------------------------~~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di 172 (342)
- . ....++.+.+.++|+||+||++|| +++||||||+|+||++||
T Consensus 283 ~~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP-~LdKVLYLD~DVVVqgDL 361 (535)
T PLN02867 283 VNVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFP-DLNKIVFLDDDVVVQHDL 361 (535)
T ss_pred ccccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhh-ccCeEEEecCCEEEcCch
Confidence 0 0 001223456778999999999999 599999999999999999
Q ss_pred HHHHccccCCCeEEeeccc--ccC------cccccCccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHH
Q 042515 173 AKLWSINLRGRVLGAPEYC--HAN------FTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEY 244 (342)
Q Consensus 173 ~~L~~~dl~~~~iaA~~d~--~~~------~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~ 244 (342)
++||++||+|+++|||.|. ... +.+|++ +++|....++ ..+.||||||||||||++||+.++++++++
T Consensus 362 seLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlN---fsnp~i~~~~-~p~~cYFNSGVmLINL~~WRe~nITek~~~ 437 (535)
T PLN02867 362 SSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLN---FSHPLISSNL-DQERCAWLYGMNVFDLKAWRRTNITEAYHK 437 (535)
T ss_pred HHHHhCcCCCCeEEEEeccccccccccchhhhhhcc---ccchhhhccC-CCCCcceecceeeeeHHHHHHhcHHHHHHH
Confidence 9999999999999999763 211 122332 4455444444 346899999999999999999999999999
Q ss_pred HHHHhcccccccCCCcchhh---hhhcCceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCC
Q 042515 245 WMRVQKKYRIYELGSLPPFL---LVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPC 321 (342)
Q Consensus 245 ~~~~~~~~~~~~~~DQd~lN---~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~ 321 (342)
|++.+.... ..+.||+.|| ++|.|++++||.+||+.++|++.. ....+. ..+++||||+|+.|||+..+..
T Consensus 438 ~Le~n~~~~-~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~-~~~~~~-i~~paIIHYnG~~KPW~e~~~~--- 511 (535)
T PLN02867 438 WLKLSLNSG-LQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPP-EVPREI-LESAAVLHFSGPAKPWLEIGFP--- 511 (535)
T ss_pred HHHhchhcc-cccccccccchHHHHhcCcEEECChhhcccCCCcccc-cchhhh-cCCcEEEEECCCCCcccccCCC---
Confidence 998654321 2345788877 599999999999999988775421 111111 2477999999999999998765
Q ss_pred CcccccccccccCCC
Q 042515 322 PLDSLWAPYDLFRHK 336 (342)
Q Consensus 322 ~~~~lW~~Y~~~~~~ 336 (342)
+++++|.+|..+.++
T Consensus 512 ~yR~~W~kyl~~~~~ 526 (535)
T PLN02867 512 EVRSLWYRHVNFSDK 526 (535)
T ss_pred chhHHHHHhcCccch
Confidence 489999999888765
No 14
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=5.7e-44 Score=336.39 Aligned_cols=259 Identities=21% Similarity=0.321 Sum_probs=195.1
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHH--HHhhCCCccEEEEEecCccccCccchhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRT--ITATFPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~--l~~~~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
.++||+++|.||+.+++|+|+|++.|++. ..+.||+++++++++..++. +.+.|. ..+.++.+|.+.+....+.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~-~~i~~~~id~~~~~~~~~~-- 77 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFK-SFIVLEVIDIEPFLDYPPF-- 77 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhc-cceeeEEEechhhhccccc--
Confidence 58999999999999999999999999974 47999999999998764321 223343 2456777787766655421
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCC
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTV 213 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~ 213 (342)
....+.++|+|+++++++|+ .+|+||||+|+||+|||++||+++++++++|||.|+.... |.+...++.-
T Consensus 78 -~~~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~--------~~~~~~~~~~ 147 (325)
T COG1442 78 -TKRFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHY--------MKEGALRLEK 147 (325)
T ss_pred -ccchHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhh--------hhhhhhHhhh
Confidence 23445789999999999996 6999999999999999999999999999999999864211 1110111111
Q ss_pred CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCCccccccc
Q 042515 214 KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCR 293 (342)
Q Consensus 214 ~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~ 293 (342)
......|||||||++|++.||++++++++++++..++ ..+..+|||+||++|.+++..||.+||++..........+.
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~--~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~ 225 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE--NDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYI 225 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccc--cccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhh
Confidence 1234679999999999999999999999999987544 33467999999999999999999999999544322222111
Q ss_pred cCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccc
Q 042515 294 NLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDL 332 (342)
Q Consensus 294 ~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~ 332 (342)
.....++.|+||+|+.|||+......++ ...|.....
T Consensus 226 ~~~~~~~~iiHy~g~~KPW~~~~~~~~~--~~~w~~i~~ 262 (325)
T COG1442 226 YPFGDDPVILHYAGPTKPWHSDSSNYPR--SHEWHEILA 262 (325)
T ss_pred ccCCCCceEEEecCCCCCCcCccccccH--HHHHHHHHh
Confidence 1234578999999999999998865432 344544433
No 15
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=8.8e-44 Score=327.42 Aligned_cols=240 Identities=21% Similarity=0.276 Sum_probs=183.6
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhC--CCccEEEEEecCccccCccchhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATF--PYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~--p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
|||++|+|++|+++++|++.||++|++. +.++|||++++++++.. +.|++.. +..+++++.++......... .
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~-~~L~~~~~~~~~~i~~~~i~~~~~~~~~~---~ 75 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENK-KKLKELLKKYNSSIEFIKIDNDDFKFFPA---T 75 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHH-HHHHHHHHhcCCeEEEEEcCHHHHhcCCc---c
Confidence 7999999999999999999999999985 57999999999886543 3344332 25578888887654433221 1
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCC
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVK 214 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~ 214 (342)
....+..+|+||++++++| +++||||||+|+||++||++||+++++|+.+||+.|+....... + ..... .
T Consensus 76 ~~~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~-----~---~~~~~-~ 145 (248)
T cd04194 76 TDHISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK-----R---KRRLG-G 145 (248)
T ss_pred cccccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHH-----H---HhhcC-C
Confidence 2345568999999999999 79999999999999999999999999999999998875422100 0 00011 1
Q ss_pred CCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCCccccc---
Q 042515 215 GRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGL--- 291 (342)
Q Consensus 215 ~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~--- 291 (342)
.....||||||||+|+++||+.++++++++++..... .+.++||++||.+|.+++..||.+||++..........
T Consensus 146 ~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~ 223 (248)
T cd04194 146 YDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGG--RLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKE 223 (248)
T ss_pred CcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCC--ceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchh
Confidence 2346799999999999999999999999999986432 34579999999999999999999999985433211100
Q ss_pred --cccCCCCCcEEEeccCCCCCCc
Q 042515 292 --CRNLHPGPVSLLHWSGKGKPWL 313 (342)
Q Consensus 292 --~~~~~~~~~~IiHy~g~~KPW~ 313 (342)
......++++||||+|+.|||+
T Consensus 224 ~~~~~~~~~~~~iiHf~g~~KPW~ 247 (248)
T cd04194 224 EQELEEARKNPVIIHYTGSDKPWN 247 (248)
T ss_pred HHHHHHHhcCCEEEEeCCCCCCCC
Confidence 0011235789999999999996
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=4.7e-41 Score=306.67 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=165.8
Q ss_pred eEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCc-cE-EEEEecCccccCccchhhhh
Q 042515 58 HISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYL-NF-EIYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 58 ~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~-~~-~~~~~d~~~~~~~i~~~~~~ 135 (342)
||++++|.+|+.++.|+++||++|++.+..+.||+++++.+.+..+ .+++....+ .+ .+...+..............
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFE-KLRALAAEVIEIEPIEFPDISMLEEFQFNSPSK 79 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHH-HHHHHSCCCCTTECEEETSGGHHH--TTS-HCC
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHH-HHhhhcccccceeeeccchHHhhhhhhhccccc
Confidence 7999999999999999999999999876789999999998876544 444444432 22 23333322211111111223
Q ss_pred hhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCCC
Q 042515 136 ALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKG 215 (342)
Q Consensus 136 ~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~ 215 (342)
.+.++.+|+|++++++|+ +++||||||+|++|.+||++||+++++|+.+||+++.. +.... +...........
T Consensus 80 ~~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~--~~~~~----~~~~~~~~~~~~ 152 (250)
T PF01501_consen 80 RHFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDES--FDNFP----NKRFPFSERKQP 152 (250)
T ss_dssp TCGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE------HHHH----TSTTSSEEECES
T ss_pred ccccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhcccchhhhccccccch--hhhhh----hcccchhhcccC
Confidence 455678999999999997 69999999999999999999999999999999998721 11111 111111111112
Q ss_pred CCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCCccccccccC
Q 042515 216 RRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNL 295 (342)
Q Consensus 216 ~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~~~~~~ 295 (342)
...+||||||||+|+++||++++.++++++++.+.. .+.++||++||++|.++++.||.+||++..+. +....+...
T Consensus 153 ~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~~~ 229 (250)
T PF01501_consen 153 GNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYFNP 229 (250)
T ss_dssp TTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHHHH
T ss_pred cccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhhHh
Confidence 347899999999999999999999999999875432 34579999999999999999999999985433 111111111
Q ss_pred CCCCcEEEeccCCCCCCccC
Q 042515 296 HPGPVSLLHWSGKGKPWLRI 315 (342)
Q Consensus 296 ~~~~~~IiHy~g~~KPW~~~ 315 (342)
...+++||||+|..|||...
T Consensus 230 ~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 230 ILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp HGCC-SEEE--SSS-TTSTT
T ss_pred hcCCeEEEEeCCCCcCCCCC
Confidence 12477999999999999864
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=6.5e-39 Score=298.86 Aligned_cols=255 Identities=16% Similarity=0.283 Sum_probs=175.4
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh---CC-CccEEEEEecCccccCccchh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT---FP-YLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~---~p-~~~~~~~~~d~~~~~~~i~~~ 132 (342)
|||++++-++++..+.++|+|++.|+. ..++|||++++...+.+++.++++ +. .+..+++.+... .... +
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P--~~~~--~ 74 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFP--SGNA--A 74 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecC--ccch--h
Confidence 578877766669999999999999985 579999999984434555555443 21 122255555211 0100 1
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHcc--ccCCC-eEEeecccccCcccccCccCCCCccc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSI--NLRGR-VLGAPEYCHANFTNYFTSKFWSNPVF 209 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~--dl~~~-~iaA~~d~~~~~~~~~~~~~w~~~~~ 209 (342)
....+.+|.+|+||++|++|| ++|||||||+|+||.+||++||++ ++++. ++|++++....-. .|-+...
T Consensus 75 ~ws~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~------~~~~~~~ 147 (304)
T cd06430 75 EWKKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNI------GWYNRFA 147 (304)
T ss_pred hhhhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccch------hhhhhhc
Confidence 123456689999999999999 799999999999999999999999 88875 5555443211001 1211111
Q ss_pred cCCCCCCCCccceeeEEEEehhHHhh-----------ccHHHHHHHHHHHhcccccccCCCcchhhhhhcCc---eEecC
Q 042515 210 SGTVKGRRPCYFNTGVMVIDLRKWRE-----------GRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGD---VEGVE 275 (342)
Q Consensus 210 ~~~~~~~~~~yFNsGVmlinL~~wR~-----------~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~---i~~L~ 275 (342)
...+. +..|||||||||||++||+ .++++++++++++.+. + ..++|||+||++|.++ ++.||
T Consensus 148 ~~~~~--~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-l~~~DQDiLN~v~~~~p~~~~~Lp 223 (304)
T cd06430 148 RHPYY--GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKL-K-ITWGDQDLINIIFHHNPEMLYVFP 223 (304)
T ss_pred ccCcc--cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhccc-C-CCCCCHHHHHHHHcCCCCeEEEcC
Confidence 11221 2357999999999999999 7789999998875442 2 3479999999999998 99999
Q ss_pred ccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccC
Q 042515 276 HRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFR 334 (342)
Q Consensus 276 ~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 334 (342)
++||++.... .+...|...+.+.++||||+++.| +... .| .++.++..+..|.
T Consensus 224 ~~wN~~~d~~-~y~~~~~~~~~~~~~~~H~n~~~~--~~~~--~~-~f~~~~~~~~~~~ 276 (304)
T cd06430 224 CHWNYRPDHC-MYGSNCKAAEEEGVFILHGNRGVY--HSDK--QP-AFRAVYEAIREYT 276 (304)
T ss_pred ccccCCccce-eecccccccccccceEEEcCCCCC--CCcc--ch-HHHHHHHHHHhcc
Confidence 9999886321 122335433456889999998666 3222 22 4677777666655
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=7e-38 Score=287.91 Aligned_cols=233 Identities=17% Similarity=0.260 Sum_probs=164.2
Q ss_pred ceEEEEe-CcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHH--HHHhhCCCccEEEEEecC-ccccCccchh
Q 042515 57 IHISMTL-DSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSR--TITATFPYLNFEIYRFDT-NLVKGKISYS 132 (342)
Q Consensus 57 i~I~~~~-D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~--~l~~~~p~~~~~~~~~d~-~~~~~~i~~~ 132 (342)
|||+.+. |..|+++++|++.||++|+. ..++|||++++++.+..+. .+.+.+ +.+++++.++. ..+... ...
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~-~~~i~~i~i~~~~~~~~~-~~~ 76 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEY-GFEYELVTYKWPRWLHKQ-TEK 76 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHh-CCceEEEEecChhhhhcc-ccc
Confidence 5777654 56899999999999999985 5799999999998765322 122334 34678888763 322211 111
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCC
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
.+ ...+|+|++++++||++++||||||+|+||.+||++||++|++|+++||+++|..... .-....|........
T Consensus 77 ~~----~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~-~~~~~~~~~~~~~~~ 151 (248)
T cd06432 77 QR----IIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKE-MDGFRFWKQGYWKSH 151 (248)
T ss_pred ch----hHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchh-cccchhhhhhhhhhh
Confidence 00 1247899999999998899999999999999999999999999999999988753210 000011211000111
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcc-cccccCCCcchhhhhhcCc-eEecCccccccCCCCCcccc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKK-YRIYELGSLPPFLLVFAGD-VEGVEHRWNQHGLGGDNLEG 290 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~-~~~~~~~DQd~lN~vf~~~-i~~L~~~wN~~~~~~~~~~~ 290 (342)
+ +...|||||||||||++||+.++++++.+.++.... ...+.+.|||+||.++.++ ++.||++||++-.
T Consensus 152 l--~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~------- 222 (248)
T cd06432 152 L--RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCET------- 222 (248)
T ss_pred c--CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHH-------
Confidence 1 134599999999999999999999987776653221 2224578999999999886 9999999998732
Q ss_pred ccccCCCCCcEEEeccC
Q 042515 291 LCRNLHPGPVSLLHWSG 307 (342)
Q Consensus 291 ~~~~~~~~~~~IiHy~g 307 (342)
.|.+.....+.+|||..
T Consensus 223 ~~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 223 WCSDESKKKAKTIDLCN 239 (248)
T ss_pred HhcccccCccceeeccc
Confidence 12122234668999986
No 19
>PLN00176 galactinol synthase
Probab=99.97 E-value=6.8e-30 Score=241.69 Aligned_cols=238 Identities=14% Similarity=0.176 Sum_probs=148.6
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEE-EecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHF-ISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhi-l~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
..-.++++|++|+.|+.++.+||+++.+. ..+++ ++++++.+ -++.|++.+. .+..++.-...... ....
T Consensus 24 AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~---~~lVvlVt~dVp~e-~r~~L~~~g~----~V~~V~~i~~~~~~-~~~~ 94 (333)
T PLN00176 24 AYVTFLAGNGDYVKGVVGLAKGLRKVKSA---YPLVVAVLPDVPEE-HRRILVSQGC----IVREIEPVYPPENQ-TQFA 94 (333)
T ss_pred EEEEEEecCcchHHHHHHHHHHHHHhCCC---CCEEEEECCCCCHH-HHHHHHHcCC----EEEEecccCCcccc-cccc
Confidence 34444677889999999999999998653 34444 35677764 3555654432 22322211000000 0000
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCC-----c-c
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSN-----P-V 208 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~-----~-~ 208 (342)
.. ....+|.||.++++.. ++||||||+|+||+++|++||+++. + .+||+.+|..+...-..+.+|-. + .
T Consensus 95 ~~-~~~i~~tKl~iw~l~~--ydkvlyLDaD~lv~~nid~Lf~~~~-~-~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~ 169 (333)
T PLN00176 95 MA-YYVINYSKLRIWEFVE--YSKMIYLDGDIQVFENIDHLFDLPD-G-YFYAVMDCFCEKTWSHTPQYKIGYCQQCPDK 169 (333)
T ss_pred cc-hhhhhhhhhhhccccc--cceEEEecCCEEeecChHHHhcCCC-c-ceEEEecccccccccccccccccccccchhh
Confidence 00 0124789999999774 8999999999999999999998842 3 57888877543110000001100 0 0
Q ss_pred c--cCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCC
Q 042515 209 F--SGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGD 286 (342)
Q Consensus 209 ~--~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~ 286 (342)
+ ......+...||||||||+|++.|+.++ ++++++... . +.++|||+||.+|.++|+.||.+||++.....
T Consensus 170 ~~wp~~~g~~~~~yFNSGVlvinps~~~~~~----ll~~l~~~~--~-~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~ 242 (333)
T PLN00176 170 VTWPAELGPPPPLYFNAGMFVFEPSLSTYED----LLETLKITP--P-TPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLW 242 (333)
T ss_pred ccchhhccCCCCCeEEeEEEEEEcCHHHHHH----HHHHHHhcC--C-CCCCCHHHHHHHHcCcEEECCchhcCchhhhh
Confidence 0 0011122467999999999999998754 445555332 1 24699999999999999999999998732111
Q ss_pred ccccccccCCCCCcEEEeccC-CCCCCccCCC
Q 042515 287 NLEGLCRNLHPGPVSLLHWSG-KGKPWLRIDS 317 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~IiHy~g-~~KPW~~~~~ 317 (342)
..... ...++++||||+| ..|||+..+.
T Consensus 243 ~~~~~---~~~~~vkIIHY~~~~~KPW~~~~~ 271 (333)
T PLN00176 243 RHPEN---VELDKVKVVHYCAAGSKPWRYTGK 271 (333)
T ss_pred hChhh---cccCCcEEEEeeCCCCCCCCCCCc
Confidence 11111 1135789999997 5799986643
No 20
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=2.6e-30 Score=237.04 Aligned_cols=212 Identities=14% Similarity=0.224 Sum_probs=144.5
Q ss_pred EEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEec-CcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhh
Q 042515 59 ISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFIST-QRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQAL 137 (342)
Q Consensus 59 I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~-~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~ 137 (342)
+.+++|++|+.++.|+++||++|++. +.++++.+ +++++. ++.|++... ++..++.-......... ...
T Consensus 4 ~t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~-~~~L~~~~~----~~~~v~~i~~~~~~~~~--~~~ 73 (240)
T cd02537 4 VTLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEES-REALEEVGW----IVREVEPIDPPDSANLL--KRP 73 (240)
T ss_pred EEEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHH-HHHHHHcCC----EEEecCccCCcchhhhc--cch
Confidence 34667889999999999999999763 46666654 577644 344544332 23322210011000000 011
Q ss_pred cCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCCCCC
Q 042515 138 DQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRR 217 (342)
Q Consensus 138 ~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~ 217 (342)
....+|.|++++++. +++||||||+|++|++||++||++ +..+||+.++. |
T Consensus 74 ~~~~~~~kl~~~~l~--~~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~-----------~------------- 124 (240)
T cd02537 74 RFKDTYTKLRLWNLT--EYDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCG-----------W------------- 124 (240)
T ss_pred HHHHHhHHHHhcccc--ccceEEEEeCCeeEccCHHHHhCC---CCceeeecccC-----------c-------------
Confidence 223689999999975 389999999999999999999987 45566664421 1
Q ss_pred CccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCc--eEecCccccccCCCCCccccccccC
Q 042515 218 PCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGD--VEGVEHRWNQHGLGGDNLEGLCRNL 295 (342)
Q Consensus 218 ~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~--i~~L~~~wN~~~~~~~~~~~~~~~~ 295 (342)
..|||||||+++++. +..+++++++.... . +..+||++||.+|.++ ++.||.+||++........... .
T Consensus 125 ~~~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~-~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~~~-~- 195 (240)
T cd02537 125 PDLFNSGVFVLKPSE----ETFNDLLDALQDTP--S-FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPEAL-W- 195 (240)
T ss_pred cccccceEEEEcCCH----HHHHHHHHHHhccC--C-CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCchhh-c-
Confidence 259999999999864 45577777776432 2 5678999999999999 9999999999744322111100 1
Q ss_pred CCCCcEEEeccCCCCCCccCCCC
Q 042515 296 HPGPVSLLHWSGKGKPWLRIDSK 318 (342)
Q Consensus 296 ~~~~~~IiHy~g~~KPW~~~~~~ 318 (342)
...+++||||+|+.|||+.....
T Consensus 196 ~~~~~~iiHf~g~~KPW~~~~~~ 218 (240)
T cd02537 196 FGDEIKVVHFIGGDKPWSWWRDP 218 (240)
T ss_pred ccCCcEEEEEeCCCCCCCCCcCC
Confidence 12468999999999999876553
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.92 E-value=3.7e-24 Score=198.42 Aligned_cols=214 Identities=14% Similarity=0.110 Sum_probs=140.8
Q ss_pred EEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEE-ecCcCHHHHHHHHHh--hCCCccEEEEEecCccccCccchhhhh
Q 042515 59 ISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFI-STQRQRLELSRTITA--TFPYLNFEIYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 59 I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil-~~~~s~~~l~~~l~~--~~p~~~~~~~~~d~~~~~~~i~~~~~~ 135 (342)
|.++++..|+.++.++.+||.++.+. ....++ +++.+........+. ......+.+..++.....+ ..
T Consensus 4 vtl~Tn~~YL~gAlvL~~sLr~~gs~---~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~--~~---- 74 (278)
T cd06914 4 VNYATNADYLCNALILFEQLRRLGSK---AKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG--GD---- 74 (278)
T ss_pred EEEecChhHHHHHHHHHHHHHHhCCC---CCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC--CC----
Confidence 34667899999999999999998874 344454 445543221111000 0111233444444221111 00
Q ss_pred hhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCCC
Q 042515 136 ALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKG 215 (342)
Q Consensus 136 ~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~ 215 (342)
... ..+|.||.++++ . +++||||||+|++|+++|++||+++.. ..+|||.. .
T Consensus 75 ~~~-~~~~tKl~~~~l-~-~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~~------------~------------ 126 (278)
T cd06914 75 AYW-AKSLTKLRAFNQ-T-EYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPRA------------Y------------ 126 (278)
T ss_pred ccH-HHHHHHHHhccc-c-ceeeEEEecCChhhhcChHHHhcCCcc-cceeeecC------------c------------
Confidence 011 136999999998 4 499999999999999999999998733 33666531 1
Q ss_pred CCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCc-------eEecCcc-ccccCCCCCc
Q 042515 216 RRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGD-------VEGVEHR-WNQHGLGGDN 287 (342)
Q Consensus 216 ~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~-------i~~L~~~-wN~~~~~~~~ 287 (342)
.||||||||||+++|+.+++.+++.+.... +. ..+||++||.+|.|+ +..||++ ||.......+
T Consensus 127 ---~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~----~~-~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~ 198 (278)
T cd06914 127 ---WKFASHLMVIKPSKEAFKELMTEILPAYLN----KK-NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFRE 198 (278)
T ss_pred ---ceecceeEEEeCCHHHHHHHHHHHHHhccc----CC-CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcc
Confidence 199999999999999999888887765432 11 457999999999999 9999997 9986321110
Q ss_pred -----cccc---ccc---C--CCCCcEEEeccCC--CCCCccCCC
Q 042515 288 -----LEGL---CRN---L--HPGPVSLLHWSGK--GKPWLRIDS 317 (342)
Q Consensus 288 -----~~~~---~~~---~--~~~~~~IiHy~g~--~KPW~~~~~ 317 (342)
+.+. .++ . .-.+.++|||+.. +|||.....
T Consensus 199 ~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~~~ 243 (278)
T cd06914 199 KLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYNNL 243 (278)
T ss_pred cCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCcCH
Confidence 0010 000 0 0136799999985 799987654
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.2e-14 Score=152.27 Aligned_cols=256 Identities=20% Similarity=0.311 Sum_probs=167.1
Q ss_pred CCCcceEEEEeC-cchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccch
Q 042515 53 NPSIIHISMTLD-STYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISY 131 (342)
Q Consensus 53 ~~~~i~I~~~~D-~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~ 131 (342)
+.+.|||+-.+. .-|-|.+..++.|+++|+..| +.|+++-..+|+ .++..+...-...++++..+. -+++.
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSP-tFKe~iP~mA~eYnFeyElv~-----YkWPr 1249 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSP-TFKESIPHMAKEYNFEYELVQ-----YKWPR 1249 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcCh-HHHHHHHHHHHHhCceEEEEE-----ecCch
Confidence 456899996554 469999999999999999855 999999988887 344433211001123332222 22221
Q ss_pred hhhhh-hc--CcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCcc
Q 042515 132 SIRQA-LD--QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPV 208 (342)
Q Consensus 132 ~~~~~-~~--~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~ 208 (342)
=.++. -. -...|-=|||.-+||.+++||||.|+|-||+.|+.||.++|++|++.|-+..|..+. ..-+..||+...
T Consensus 1250 WLhqQ~EKQRiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~-EMDGyRFWK~GY 1328 (1470)
T KOG1879|consen 1250 WLHQQTEKQRIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRR-EMDGYRFWKQGY 1328 (1470)
T ss_pred hhhhhhhhhhhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccc-cccchhHHhhhH
Confidence 11110 00 114677789999999999999999999999999999999999999999777776432 111234686654
Q ss_pred ccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHh--cccccccCCCcchhh-hhhcCceEecCccccccCCCC
Q 042515 209 FSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQ--KKYRIYELGSLPPFL-LVFAGDVEGVEHRWNQHGLGG 285 (342)
Q Consensus 209 ~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~--~~~~~~~~~DQd~lN-~vf~~~i~~L~~~wN~~~~~~ 285 (342)
++..+.| ..|--|...|+||+|.|+..-.+++.--.+.- ..+.+-. -|||.-| +...-.|+.||..|=+....+
T Consensus 1329 W~~hL~g--rkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsN-LDQDLPNnm~hqVpIkSLPqeWLWCETWC 1405 (1470)
T KOG1879|consen 1329 WKKHLRG--RKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSN-LDQDLPNNMQHQVPIKSLPQEWLWCETWC 1405 (1470)
T ss_pred HHHHhcc--CccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhh-ccccccccceeecccccCCcchhhhhhhc
Confidence 4444433 57999999999999999998888865444321 1123322 3788765 456668999999987654433
Q ss_pred CccccccccCCCCCcEEEeccCCCCCCccC----CCCCCCCcccccccccc
Q 042515 286 DNLEGLCRNLHPGPVSLLHWSGKGKPWLRI----DSKKPCPLDSLWAPYDL 332 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~----~~~~~~~~~~lW~~Y~~ 332 (342)
++ -....+++|--+. -||-.. .+.+ .-..|..||.
T Consensus 1406 ~d-------~skkkAktIDLCn--NP~TKEpKL~~A~R---iv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1406 DD-------ESKKKAKTIDLCN--NPLTKEPKLDAARR---IVSEWTDYDA 1444 (1470)
T ss_pred Cc-------hhhhhchhhhhhc--CccccchhhHHHhh---hcCCCcccch
Confidence 32 1112446666664 366543 1122 4467777764
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.90 E-value=2.8e-10 Score=104.51 Aligned_cols=164 Identities=23% Similarity=0.385 Sum_probs=97.3
Q ss_pred chhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeeccc-------ccC-----------cc------
Q 042515 141 LNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYC-------HAN-----------FT------ 196 (342)
Q Consensus 141 ~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~-------~~~-----------~~------ 196 (342)
..+.|+.+.+... +|||||||+|.||+.++++||+.+. +-.+|..|. +.. +.
T Consensus 155 ~mftKLrVfeqtE--yDRvifLDsDaivlknmDklFd~Pv--yef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQTE--YDRVIFLDSDAIVLKNMDKLFDYPV--YEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhhh--hceEEEeccchHHhhhhHHHhcchh--hhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 5778999988874 8999999999999999999998662 112221111 100 00
Q ss_pred -ccc-CccCCCC--ccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccccccc---CCCcchhhhhhcC
Q 042515 197 -NYF-TSKFWSN--PVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYE---LGSLPPFLLVFAG 269 (342)
Q Consensus 197 -~~~-~~~~w~~--~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~---~~DQd~lN~vf~~ 269 (342)
..+ ...+|.. +.........-+.+||||.||++..++.-.. +...+- ..+|+ +-.|.++|+.++.
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~r----iv~~al----Pklydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLR----IVWFAL----PKLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHH----HHHHhh----HHhhhhhhHHHHHHHHHHHhh
Confidence 001 0112211 1111111112256899999999999876543 332221 23442 1247778877543
Q ss_pred ----ceEecCccccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCccccccc
Q 042515 270 ----DVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAP 329 (342)
Q Consensus 270 ----~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~ 329 (342)
-|..++.+|| |...+. .++ | -.+.+|+ |||...+...||.....|++
T Consensus 303 ~g~FPwerld~~yN--G~wa~~-----ndl-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~ 353 (368)
T COG5597 303 EGFFPWERLDPRYN--GYWADA-----NDL-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQ 353 (368)
T ss_pred hccCchhhcCcccc--cccccc-----ccc-c-hHHHhhc----CcCCCCcccChhhhcCcChh
Confidence 4788888988 321110 011 1 2245554 99999999889999999984
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.31 E-value=0.0012 Score=59.10 Aligned_cols=139 Identities=15% Similarity=0.083 Sum_probs=75.1
Q ss_pred hhHHH-hhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCCCCCCcc
Q 042515 142 NYARI-YLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCY 220 (342)
Q Consensus 142 ~y~Rl-~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~y 220 (342)
+..|. ++-++|...+ -|+|+|+|++..+|..++++. .+.-+.+..|+.... .. ......
T Consensus 52 ~~~K~~~~~~~L~~G~-~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d~~~~~------------~~-----~~~~~~ 111 (212)
T PF03407_consen 52 TWLKPKVLLDLLELGY-DVLFSDADVVWLRDPLPYFEN--PDADILFSSDGWDGT------------NS-----DRNGNL 111 (212)
T ss_pred HHHHHHHHHHHHHcCC-ceEEecCCEEEecCcHHhhcc--CCCceEEecCCCccc------------ch-----hhcCCc
Confidence 34454 3456676544 599999999999999999921 333333333321100 00 012335
Q ss_pred ceeeEEEEehhHHhhccHHHH-HHHHHHHhcccccccCCCcchhhhhhcCc--------eEecCccccccCCCCCccccc
Q 042515 221 FNTGVMVIDLRKWREGRYTEK-LEYWMRVQKKYRIYELGSLPPFLLVFAGD--------VEGVEHRWNQHGLGGDNLEGL 291 (342)
Q Consensus 221 FNsGVmlinL~~wR~~~~~~~-~~~~~~~~~~~~~~~~~DQd~lN~vf~~~--------i~~L~~~wN~~~~~~~~~~~~ 291 (342)
+|+|+|.+.-.. -+.+ +.+|+....... ...||.+||.++.+. +..||...-..+.++-.....
T Consensus 112 ~n~G~~~~r~t~-----~~~~~~~~w~~~~~~~~--~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~ 184 (212)
T PF03407_consen 112 VNTGFYYFRPTP-----RTIAFLEDWLERMAESP--GCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRD 184 (212)
T ss_pred cccceEEEecCH-----HHHHHHHHHHHHHHhCC--CcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecch
Confidence 699999995543 3333 344555332221 234999999887663 566766544322221111001
Q ss_pred cccCC-CCCcEEEeccC
Q 042515 292 CRNLH-PGPVSLLHWSG 307 (342)
Q Consensus 292 ~~~~~-~~~~~IiHy~g 307 (342)
..... ..++.++|.++
T Consensus 185 ~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 185 WAWVPTKNKPYIVHANC 201 (212)
T ss_pred hhhhccccccceEEEcC
Confidence 11111 14678999986
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=97.11 E-value=0.0019 Score=60.31 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=64.5
Q ss_pred EEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEe-cCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhh
Q 042515 59 ISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFIS-TQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQAL 137 (342)
Q Consensus 59 I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~-~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~ 137 (342)
||++..+.++..+..+|+.|+...+ .-+|.+..-. ++.+++. .+.+.. .++ +.++....-.........+.
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~g~-~LPIEI~~~~~~dl~~~~-~~~l~~-~q~--v~~vd~~~~~~~~~~~~~~~--- 75 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRLGN-TLPIEIIYPGDDDLSKEF-CEKLLP-DQD--VWFVDASCVIDPDYLGKSFS--- 75 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHhCC-CCCEEEEeCCccccCHHH-HHHHhh-hhh--hheecceEEeeccccccccc---
Confidence 8888888999999999999988543 3456665443 4555433 333322 111 22221111111111111110
Q ss_pred cCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccc
Q 042515 138 DQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSIN 179 (342)
Q Consensus 138 ~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~d 179 (342)
...|..=.++-++. ..+.||+||+|.|...|++.||+.+
T Consensus 76 --~~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 76 --KKGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred --cCCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 01344334555565 5999999999999999999999865
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.03 E-value=0.019 Score=55.84 Aligned_cols=139 Identities=24% Similarity=0.334 Sum_probs=73.3
Q ss_pred cccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCCCCCCccceeeEEEEehh
Q 042515 152 LPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLR 231 (342)
Q Consensus 152 lp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~ 231 (342)
.| +++-+-|||+|++|.+-- +++++..+ ++. |+ .-. .|.. ..+..++-.+.|+||++|..-
T Consensus 195 ~P-eaEWiWWLDsDALImNms---felPlery-----~~~--Nl---Vih-g~~~----~l~~~kdW~GLNtGsFLIRNc 255 (429)
T PLN03182 195 HP-EVEWIWWMDSDALFTDMT---FEIPLEKY-----EGY--NL---VIH-GWDE----LVYDQKSWIGLNTGSFLIRNC 255 (429)
T ss_pred CC-CceEEEEecCCceeecCC---CCCCHhHc-----CCc--Ce---eec-cchh----hheeccccCccceeeEEEEcC
Confidence 47 499999999999998731 22232200 000 00 000 1111 012233456899999999665
Q ss_pred HHhhccHHHHHHH-HHHH-----------------hcccccccCCCcchhhhhhc-C-----ceEecCccccccCCCC--
Q 042515 232 KWREGRYTEKLEY-WMRV-----------------QKKYRIYELGSLPPFLLVFA-G-----DVEGVEHRWNQHGLGG-- 285 (342)
Q Consensus 232 ~wR~~~~~~~~~~-~~~~-----------------~~~~~~~~~~DQd~lN~vf~-~-----~i~~L~~~wN~~~~~~-- 285 (342)
.|-. .+++ |... -+.+..++..||.+|-+++. + .-..|...|-.++...
T Consensus 256 qWSl-----dlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gyw~~i 330 (429)
T PLN03182 256 QWSL-----DLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGL 330 (429)
T ss_pred HHHH-----HHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccccHHH
Confidence 5543 2222 2211 12233556789998876652 2 2357777777775421
Q ss_pred -CccccccccCCCC-----CcEEEeccCCCCCCccC
Q 042515 286 -DNLEGLCRNLHPG-----PVSLLHWSGKGKPWLRI 315 (342)
Q Consensus 286 -~~~~~~~~~~~~~-----~~~IiHy~g~~KPW~~~ 315 (342)
+.+.+.....+++ -+.|.||+| .||....
T Consensus 331 v~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~ 365 (429)
T PLN03182 331 VDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGY 365 (429)
T ss_pred HHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCC
Confidence 1111110111222 368999999 7998554
No 27
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=90.23 E-value=0.32 Score=47.55 Aligned_cols=164 Identities=15% Similarity=0.116 Sum_probs=83.7
Q ss_pred hHHHhhhhhcccccCcEEEEecceEEecchHHHHccccC-C--CeEEeecccccCccccc-------Cc-cCCCCccccC
Q 042515 143 YARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-G--RVLGAPEYCHANFTNYF-------TS-KFWSNPVFSG 211 (342)
Q Consensus 143 y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~-~--~~iaA~~d~~~~~~~~~-------~~-~~w~~~~~~~ 211 (342)
+..+.+..+-+ .+++||+|.|+.+..++..+++.... + +......+.......+. +. .+|.+ ...
T Consensus 114 ~~~~~~~~~~~--~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~--~~~ 189 (369)
T KOG1950|consen 114 DDKIKIWRLIE--DGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSN--WPD 189 (369)
T ss_pred ccceeecceec--cCceEEEecchhhccCccccccccchhcccccceeeecccccceEEeccchhcCChhhhhhh--chh
Confidence 44444444333 67888888888888888888777664 1 11111111000000000 00 01110 000
Q ss_pred CC-CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCCcccc
Q 042515 212 TV-KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEG 290 (342)
Q Consensus 212 ~~-~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~~~~~ 290 (342)
.+ .+.....||+|.|++-..-. .+..++.......-+..++|+++|.+|...-...|..+|......-...+
T Consensus 190 ~~~~~~l~~~~n~~~~v~~ps~~-------~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~ 262 (369)
T KOG1950|consen 190 LFATNILPLIFNSGLLVFEPSLC-------NYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPK 262 (369)
T ss_pred hccCCCccceeccCccccCCCcc-------chhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCcc
Confidence 11 12234569999999854432 22224443333344667899999999987666888888865221110010
Q ss_pred -c-cccCCCCCcEEEeccCCCCCCccCCC
Q 042515 291 -L-CRNLHPGPVSLLHWSGKGKPWLRIDS 317 (342)
Q Consensus 291 -~-~~~~~~~~~~IiHy~g~~KPW~~~~~ 317 (342)
. .....+.....+||.|..|||.....
T Consensus 263 ~~~l~~~~~~~~~~~~y~~~~~p~~~~~~ 291 (369)
T KOG1950|consen 263 KNDLSRASSVLRYALHYLGANKPELCYRD 291 (369)
T ss_pred ccchhhcccccchhhhccccCCCCccccC
Confidence 0 00011122345699997788876543
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=89.97 E-value=0.2 Score=45.93 Aligned_cols=147 Identities=17% Similarity=0.211 Sum_probs=17.1
Q ss_pred hhHHHh-hhhhc---ccccCcEEEEecceEEecchHHHHccccC----------CCeEEeecccccCcccccCccCCCCc
Q 042515 142 NYARIY-LADLL---PLTVGRIIYFDSDLIVVDDVAKLWSINLR----------GRVLGAPEYCHANFTNYFTSKFWSNP 207 (342)
Q Consensus 142 ~y~Rl~-l~~ll---p~~vdRvIYLDsDiiV~~Di~~L~~~dl~----------~~~iaA~~d~~~~~~~~~~~~~w~~~ 207 (342)
+..|+. +-+.+ | +++-|.|||+|++|..-=-+|-+.-|. +..+...+. ..+... ...+
T Consensus 60 ~W~K~~~lr~~m~~~P-~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~----~~~~~~---~~~~ 131 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYP-EAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDS----IIKTYS---VIDG 131 (239)
T ss_dssp HHTHHHHHHHHHHH-T-T-SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCC-CCCEEEEEcCCeEEEecccccccccccccccccccccccccccccc----cccccc---cccc
Confidence 455543 34444 7 489999999999998754444332221 111111110 000000 0000
Q ss_pred cccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhc--cc--ccccCCCcchhhhhhc------CceEecCcc
Q 042515 208 VFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQK--KY--RIYELGSLPPFLLVFA------GDVEGVEHR 277 (342)
Q Consensus 208 ~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~--~~--~~~~~~DQd~lN~vf~------~~i~~L~~~ 277 (342)
.-...+...+..++|+||+++--.. ++..+++.+.... .. .....++|.+|-.++. +++..+|.+
T Consensus 132 ~~~~li~t~d~~gLNtGsFliRns~-----ws~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~ 206 (239)
T PF05637_consen 132 NDIHLIITQDWNGLNTGSFLIRNSP-----WSRDFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQR 206 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0001112345779999999995544 4444444322111 11 1112568998875543 445666654
Q ss_pred c-cccCCCCCccccccccCCCCCcEEEeccC
Q 042515 278 W-NQHGLGGDNLEGLCRNLHPGPVSLLHWSG 307 (342)
Q Consensus 278 w-N~~~~~~~~~~~~~~~~~~~~~~IiHy~g 307 (342)
| |....+... ....+++ -|+||.|
T Consensus 207 ~~nsy~~~~~~-----~~~~~GD-fvvhfaG 231 (239)
T PF05637_consen 207 WFNSYPEDECN-----YQYKEGD-FVVHFAG 231 (239)
T ss_dssp -------------------------------
T ss_pred ccccccccccc-----ccccccc-ccccccc
Confidence 4 222111000 1122234 7999999
No 29
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=87.24 E-value=25 Score=32.73 Aligned_cols=200 Identities=12% Similarity=0.106 Sum_probs=104.3
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~ 135 (342)
+|-|.+.+-+.|.....-.+.|.=+|=-...+++++|++|..+. +- .+ +..|.-++++..+..+ ..++.
T Consensus 35 tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~--~p-~v-~lg~~r~~~V~~v~~~---~~W~~---- 103 (271)
T cd02515 35 TIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAA--VP-EV-ELGPGRRLTVLKIAEE---SRWQD---- 103 (271)
T ss_pred EEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCccc--Cc-cc-ccCCCceeEEEEeccc---cCCcH----
Confidence 56666667779998888889998888655567899999996431 10 01 1123334666665332 12221
Q ss_pred hhcCcchhHHH-----hhhhhcccccCcEEEEecceEEecchH-HHHccccCCCeEEeecc--cccCcccccCccCCCCc
Q 042515 136 ALDQPLNYARI-----YLADLLPLTVGRIIYFDSDLIVVDDVA-KLWSINLRGRVLGAPEY--CHANFTNYFTSKFWSNP 207 (342)
Q Consensus 136 ~~~~~~~y~Rl-----~l~~llp~~vdRvIYLDsDiiV~~Di~-~L~~~dl~~~~iaA~~d--~~~~~~~~~~~~~w~~~ 207 (342)
.++.|+ .+.+..-.++|-+.++|+|+++.+++. |.. |..+|+... ...+- .-|+. -++|
T Consensus 104 -----~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~L-----g~lva~lHp~~y~~~~-~~fpY--ERrp 170 (271)
T cd02515 104 -----ISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETL-----GDSVAQLHPWWYGKPR-KQFPY--ERRP 170 (271)
T ss_pred -----HHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHh-----hhhheecChhhhcCCC-CCCCC--cCCC
Confidence 133333 222333335999999999999999887 222 234444211 00000 00110 0111
Q ss_pred cccCCC--CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccccc-ccCCCcchhhhhhc-Cc-eEecCccccccC
Q 042515 208 VFSGTV--KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRI-YELGSLPPFLLVFA-GD-VEGVEHRWNQHG 282 (342)
Q Consensus 208 ~~~~~~--~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~-~~~~DQd~lN~vf~-~~-i~~L~~~wN~~~ 282 (342)
.+..+ .+.+.-|+-+||.==-.+... ++++.|..-+..-..+.+ -...|.--||-.|- .+ .+.|++.|+...
T Consensus 171 -~S~AyIp~~eGdfYy~Ga~~GG~~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~Kp~KiLSPeY~w~e 247 (271)
T cd02515 171 -SSAAYIPEGEGDFYYHGAVFGGSVEEVY--RLTRACHEGILADKANGIEARWHDESHLNKYFLLHKPTKVLSPEYLWDD 247 (271)
T ss_pred -CccccccCCCCCeEEeeeecCccHHHHH--HHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhCCCCeecChhhcCCc
Confidence 11112 134556766665421122111 233444443332222222 12357778897653 33 799999998763
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=82.70 E-value=2.5 Score=41.59 Aligned_cols=19 Identities=32% Similarity=0.440 Sum_probs=16.9
Q ss_pred cccccCcEEEEecceEEecc
Q 042515 152 LPLTVGRIIYFDSDLIVVDD 171 (342)
Q Consensus 152 lp~~vdRvIYLDsDiiV~~D 171 (342)
.| +.+-+-|||+|++|++.
T Consensus 196 ~P-eAEWfWWLDsDALIMNp 214 (453)
T PLN03181 196 HP-EAEWIWWVDSDAVFTDM 214 (453)
T ss_pred CC-CceEEEEecCCceeecC
Confidence 67 49999999999999965
No 31
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=81.28 E-value=3.7 Score=38.98 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=40.8
Q ss_pred hhHHHhhhhhcccccCcEEEEecceEEecchHHHHcccc--CCCeEEeecc
Q 042515 142 NYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINL--RGRVLGAPEY 190 (342)
Q Consensus 142 ~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl--~~~~iaA~~d 190 (342)
-+.|++...+|| +++--||||+-+.+++|+..|.+.-+ ++..+|+..+
T Consensus 140 r~~K~lpHrlfp-~y~ySIWID~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H 189 (305)
T PF04765_consen 140 RIPKLLPHRLFP-NYDYSIWIDGKIQLIVDPLLLIERFLWRKNADIAISKH 189 (305)
T ss_pred cccceeccccCC-CCceEEEEeeeEEEecCHHHHHHHHHhcCCCcEEEeCC
Confidence 367899999999 59999999999999999999888766 4677888654
No 32
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=78.86 E-value=64 Score=31.08 Aligned_cols=202 Identities=12% Similarity=0.136 Sum_probs=93.4
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccch-hhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISY-SIR 134 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~-~~~ 134 (342)
+|-+++.+-+.|...+.-.+.|.=+|=-...++.++|++|..+. + ..+ ..-|.-++++..+... ..+.. +++
T Consensus 100 tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~--v-P~i-~l~~~r~~~V~~v~~~---~~Wqd~sm~ 172 (337)
T PF03414_consen 100 TIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSK--V-PRI-ELGPGRRLKVFEVQEE---KRWQDISMM 172 (337)
T ss_dssp EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGG--S--------TTEEEEEEE-SGG---SSHHHHHHH
T ss_pred eEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhh--C-Ccc-ccCCCceeEEEEeccc---CCCccchhH
Confidence 45566666678888888888888887655567888888887431 1 011 1123224555554321 12221 111
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecc--cccCcccccCccCCCCccccCC
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEY--CHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d--~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
+ . .++.+.-...++. ++|-+..+|+|+++.+++.. + .| |..+|+... ...+ ..-|+.. ++| .+..
T Consensus 173 R-m---~~i~~~i~~~~~~-EvDYLFc~dvd~~F~~~vGv--E-~L-g~lva~LHp~~y~~~-~~~FpYE--Rrp-~S~A 239 (337)
T PF03414_consen 173 R-M---EMISEHIEQHIQH-EVDYLFCMDVDMVFQDHVGV--E-IL-GDLVATLHPWFYFKP-RESFPYE--RRP-KSQA 239 (337)
T ss_dssp H-H---HHHHHHHHHCHHH-H-SEEEEEESSEEE-S-B-G--G-G--SSEEEEESTTTTTST-GGGS--B---ST-TSTT
T ss_pred H-H---HHHHHHHHHHHhh-cCCEEEEEecceEEecccCH--H-HH-HHHHHHhCHHHHCCC-hhhCccc--cCc-cccc
Confidence 1 0 0112222233455 59999999999999998774 1 12 456665321 1111 0111110 111 1112
Q ss_pred C--CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcc---cccccCCCcchhhhhh--cCceEecCcccccc
Q 042515 213 V--KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKK---YRIYELGSLPPFLLVF--AGDVEGVEHRWNQH 281 (342)
Q Consensus 213 ~--~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~---~~~~~~~DQd~lN~vf--~~~i~~L~~~wN~~ 281 (342)
+ .+.+..|+-+|+.==-..... ++++.|..-+..-+. ..+| .|.--||-.| +...+.|++.|+..
T Consensus 240 yIp~~eGDfYY~ga~fGGt~~~vl--~Lt~~c~~~i~~D~~n~I~A~W--hDESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 240 YIPYGEGDFYYHGAFFGGTVEEVL--RLTEACHQGIMQDKANGIEALW--HDESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp B--TT--S--EECCEEEECHHHHH--HHHHHHHHHHHHHHHTT---TT--CHHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred cccCCCCCeEEeceecCCcHHHHH--HHHHHHHHHHHhhhhcCceEec--cchhhhHHHHhhCCCceecCHHHccC
Confidence 2 134566887776653232222 244444444432222 2333 5777899765 44479999999875
No 33
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=77.34 E-value=1.2 Score=43.28 Aligned_cols=19 Identities=32% Similarity=0.805 Sum_probs=17.3
Q ss_pred EEEecceEEecchHHHHcc
Q 042515 160 IYFDSDLIVVDDVAKLWSI 178 (342)
Q Consensus 160 IYLDsDiiV~~Di~~L~~~ 178 (342)
||||+|+||++++..|-++
T Consensus 242 vYLDTDvIvLksl~~l~N~ 260 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV 260 (409)
T ss_pred EEeeccEEEeccccccccc
Confidence 8999999999999998754
No 34
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=69.20 E-value=57 Score=26.08 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=52.5
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhC-CCccEEEEEecCccccCccchhhhhhhcCcchhHHH
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATF-PYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARI 146 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~-p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl 146 (342)
...+.-++.|+++.+. ....+.|+.++.+. ...+.+++.. ....++++..+.. . + ...++.
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d-~~~~~~~~~~~~~~~i~~i~~~~n-----~--g--------~~~~~n 71 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVVDDGSTD-ETEEILEEYAESDPNIRYIRNPEN-----L--G--------FSAARN 71 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEEECS-SS-SHHHHHHHHHCCSTTEEEEEHCCC-----S--H--------HHHHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEecccccc-cccccccccccccccccccccccc-----c--c--------cccccc
Confidence 5556678888888833 45777776666532 2333333321 2334565544322 1 1 123344
Q ss_pred hhhhhcccccCcEEEEecceEEecc-hHHHHccccC
Q 042515 147 YLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSINLR 181 (342)
Q Consensus 147 ~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~dl~ 181 (342)
..-+... -+-++++|+|.++..+ |.+|.+.-.+
T Consensus 72 ~~~~~a~--~~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 72 RGIKHAK--GEYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HHHHH----SSEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred ccccccc--eeEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 4445554 3699999999999988 8888775433
No 35
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=67.58 E-value=67 Score=31.96 Aligned_cols=104 Identities=16% Similarity=0.053 Sum_probs=56.7
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHH--HHHHHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLE--LSRTITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~--l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
..+.|++.+=..- ..+..++.|+++.+-++..+.+.++.++.+.+. +.+.+++.+|.+ .+...+.+ .+ .
T Consensus 49 P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v--~v~~~~~~--~G-k--- 119 (439)
T TIGR03111 49 PDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGL--SLRYMNSD--QG-K--- 119 (439)
T ss_pred CCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCe--EEEEeCCC--CC-H---
Confidence 4577777664322 567788999987665444577777766544322 222334456654 34333322 11 1
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
+.++-..-+... -+=|+.+|+|.++..| +.++.+.
T Consensus 120 ---------a~AlN~gl~~s~--g~~v~~~DaD~~~~~d~L~~l~~~ 155 (439)
T TIGR03111 120 ---------AKALNAAIYNSI--GKYIIHIDSDGKLHKDAIKNMVTR 155 (439)
T ss_pred ---------HHHHHHHHHHcc--CCEEEEECCCCCcChHHHHHHHHH
Confidence 112222112222 3569999999999765 5555543
No 36
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=63.78 E-value=3.8 Score=32.07 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=24.4
Q ss_pred chhHHHhhhhhcccccCcEEEEecceEEecch-HHHH
Q 042515 141 LNYARIYLADLLPLTVGRIIYFDSDLIVVDDV-AKLW 176 (342)
Q Consensus 141 ~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di-~~L~ 176 (342)
.-++|+.+=..... ||+|.|+++.+++ +++-
T Consensus 66 sD~~R~~~L~~~GG-----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYGG-----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcCc-----EEEeCccccCcchhhhhh
Confidence 46789887655553 8999999999999 6654
No 37
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=62.54 E-value=97 Score=26.88 Aligned_cols=98 Identities=10% Similarity=-0.020 Sum_probs=47.9
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQA 136 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~ 136 (342)
|-|++.+=..-...+..++.|++...-.++.+.+.|+.++ +.+...+.+++......++++..+.. .+ ...
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~-s~d~t~~~~~~~~~~~~~~~~~~~~~--~~-~~~----- 73 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDG-RRPELRALAAELGVEYGYRYLTRPDN--RH-AKA----- 73 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCC-CchhHHHHHHHhhcccCceEEEeCCC--CC-CcH-----
Confidence 4555555322233456789999976543333677666555 33444444443322212233322211 01 000
Q ss_pred hcCcchhHHHhhhhhcccccCcEEEEecceEEecc
Q 042515 137 LDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD 171 (342)
Q Consensus 137 ~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D 171 (342)
..+-..-+.. ..+-++++|+|.++..|
T Consensus 74 ------~~~n~~~~~a--~~d~i~~lD~D~~~~~~ 100 (234)
T cd06421 74 ------GNLNNALAHT--TGDFVAILDADHVPTPD 100 (234)
T ss_pred ------HHHHHHHHhC--CCCEEEEEccccCcCcc
Confidence 0111111222 36899999999998655
No 38
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=59.65 E-value=73 Score=30.77 Aligned_cols=114 Identities=11% Similarity=0.024 Sum_probs=54.6
Q ss_pred eEE-EEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEE-EEEecCccccCccchhhhh
Q 042515 58 HIS-MTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFE-IYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 58 ~I~-~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~-~~~~d~~~~~~~i~~~~~~ 135 (342)
.|+ ++++ -..++.-+|.||++..+..+...++|..|+...+ ..+.++ .+. .+++ +.+.+.....-..+... .
T Consensus 3 PVlv~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~-~~~~v~-~~~-~~i~~i~~~~~~~~~~~~~~~~-~ 76 (334)
T cd02514 3 PVLVIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE-VADVAK-SFG-DGVTHIQHPPISIKNVNPPHKF-Q 76 (334)
T ss_pred CEEEEecC--CHHHHHHHHHHHHhccccCCCceEEEEeCCCchH-HHHHHH-hhc-cccEEEEcccccccccCccccc-c
Confidence 444 4444 3445667899999875333557888888886543 233332 221 1222 11111110000000000 0
Q ss_pred hhcCcchhHHHhhhhhccc-ccCcEEEEecceEEecchHHHHc
Q 042515 136 ALDQPLNYARIYLADLLPL-TVGRIIYFDSDLIVVDDVAKLWS 177 (342)
Q Consensus 136 ~~~~~~~y~Rl~l~~llp~-~vdRvIYLDsDiiV~~Di~~L~~ 177 (342)
.....+.-+|.-+-.++.. ..++||.||.|+++--|.=+.++
T Consensus 77 ~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 77 GYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 0000011122334444421 38999999999999999555443
No 39
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=59.15 E-value=20 Score=32.34 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=19.7
Q ss_pred ccCcEEEEecceEEecc-hHHHHcc
Q 042515 155 TVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 155 ~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.-+-|+.+|+|+++..| |.++...
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~~ 97 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYKA 97 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHHH
Confidence 46899999999999887 6667654
No 40
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=58.11 E-value=85 Score=31.44 Aligned_cols=117 Identities=12% Similarity=0.097 Sum_probs=52.4
Q ss_pred cceEE-EEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCC-CccEEEEEecCccccCccchhh
Q 042515 56 IIHIS-MTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFP-YLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 56 ~i~I~-~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p-~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
.+.|+ |+|+. ..++.-+|.||+++.+..+.+.+.|--|+... ...+.++ .|. .+. .+...+.+.+... +...
T Consensus 94 ~~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~-~~~~vi~-~y~~~v~-~i~~~~~~~i~~~-~~~~ 167 (434)
T PF03071_consen 94 VIPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDE-EVAEVIK-SYGDQVT-YIQHPDFSPITIP-PKEK 167 (434)
T ss_dssp ---EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-H-HHHHHHH-GGGGGSE-EEE-S--S------TT-G
T ss_pred cceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEEecCCcH-HHHHHHH-Hhhhhhe-eeecCCcCCceeC-cccc
Confidence 45554 55553 33455689999998755455666665566443 3344443 342 221 1233332222111 1100
Q ss_pred -hhhhcCcchhHHHhhhhhccc-ccCcEEEEecceEEecchHHHHcc
Q 042515 134 -RQALDQPLNYARIYLADLLPL-TVGRIIYFDSDLIVVDDVAKLWSI 178 (342)
Q Consensus 134 -~~~~~~~~~y~Rl~l~~llp~-~vdRvIYLDsDiiV~~Di~~L~~~ 178 (342)
-..+...+.-||.-|..++.. .+++||.|.-|+.+--|.=+-|+.
T Consensus 168 ~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 168 KFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 000001122345556677742 479999999999999998776653
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=57.70 E-value=65 Score=29.85 Aligned_cols=92 Identities=18% Similarity=0.168 Sum_probs=47.0
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHH----HhhCCCccEEEEEecCccccCccchhhhhhhcCcchh
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTI----TATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNY 143 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l----~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y 143 (342)
...+..+|.||+..+.....+.+.|+-++.+.......+ ....+. +++...+.. .+ + .-
T Consensus 11 ~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~--v~vi~~~~n--~G-~------------~~ 73 (299)
T cd02510 11 LSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPK--VKVLRLKKR--EG-L------------IR 73 (299)
T ss_pred HHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCc--EEEEEcCCC--CC-H------------HH
Confidence 367778999999877532224565555554332222211 122332 444432211 11 1 12
Q ss_pred HHHhhhhhcccccCcEEEEecceEEec-chHHHHcc
Q 042515 144 ARIYLADLLPLTVGRIIYFDSDLIVVD-DVAKLWSI 178 (342)
Q Consensus 144 ~Rl~l~~llp~~vdRvIYLDsDiiV~~-Di~~L~~~ 178 (342)
+|......-. -+=|++||+|+++.. -|.+|.+.
T Consensus 74 a~N~g~~~A~--gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 74 ARIAGARAAT--GDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred HHHHHHHHcc--CCEEEEEeCCcccCccHHHHHHHH
Confidence 2333323222 489999999999854 45566553
No 42
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=57.49 E-value=75 Score=33.89 Aligned_cols=121 Identities=15% Similarity=0.133 Sum_probs=63.3
Q ss_pred CcceEEEEe-Ccch---hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHH--H----HHHHhhCCCccEEEEEecCcc
Q 042515 55 SIIHISMTL-DSTY---LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLEL--S----RTITATFPYLNFEIYRFDTNL 124 (342)
Q Consensus 55 ~~i~I~~~~-D~~y---l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l--~----~~l~~~~p~~~~~~~~~d~~~ 124 (342)
..+.|++.+ ++.- ...+.+++.|+..... +.+++|+++.|+.+++.. + +.+.+.++. ..+++......
T Consensus 124 ~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~~ 201 (691)
T PRK05454 124 ARTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRRR 201 (691)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECCc
Confidence 456677665 4331 2456777889887654 357999999887665321 1 133344432 12233222211
Q ss_pred ccCccchhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHccccCCCeEEeec
Q 042515 125 VKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSINLRGRVLGAPE 189 (342)
Q Consensus 125 ~~~~i~~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~dl~~~~iaA~~ 189 (342)
=.++....+ ..+.|.. ...+|-++.||+|++...| +.++-..-..+.-+|++.
T Consensus 202 n~~~KaGNl-------~~~~~~~-----~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 202 NVGRKAGNI-------ADFCRRW-----GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCCccHHHH-------HHHHHhc-----CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 111111100 1222222 1258999999999999998 556654322233456654
No 43
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=56.37 E-value=1.3e+02 Score=26.19 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=51.8
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQA 136 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~ 136 (342)
|-|++.+=.+-...+..+|.|+...+ +..+.|+.++.+.+ ....+....+...+.+. .... .++ ..
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~-~~~~l~~~~~~~~~~v~--~~~~-~g~-~~----- 67 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEP-YLSILSQTVKYGGIFVI--TVPH-PGK-RR----- 67 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChH-HHHHHHhhccCCcEEEE--ecCC-CCh-HH-----
Confidence 34555543333466778899999876 25777776665533 33333222222122222 1111 111 11
Q ss_pred hcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 137 LDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 137 ~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
++...-+.. ..+-|+++|+|+++..| |.++.+.
T Consensus 68 -------a~n~g~~~a--~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 68 -------ALAEGIRHV--TTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred -------HHHHHHHHh--CCCEEEEECCCceeChhHHHHHHHh
Confidence 111111111 36899999999999887 7777765
No 44
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=56.08 E-value=1.1e+02 Score=24.68 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=49.0
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHh
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIY 147 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~ 147 (342)
...+.-++.|+..... ....+.|+.++... .....+.+..+ ++++...+.+ .+ . ..+|..
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~-~~~~~~~~~~~--~~~~~~~~~~--~g-~------------~~a~n~ 68 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTD-GSVELLRELFP--EVRLIRNGEN--LG-F------------GAGNNQ 68 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCc-hHHHHHHHhCC--CeEEEecCCC--cC-h------------HHHhhH
Confidence 4556778999998765 34677776666443 33334444343 3344332211 01 1 122222
Q ss_pred hhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 148 LADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 148 l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.-+.. ..+-++++|+|.++..+ +..+.+.
T Consensus 69 ~~~~~--~~~~i~~~D~D~~~~~~~l~~~~~~ 98 (166)
T cd04186 69 GIREA--KGDYVLLLNPDTVVEPGALLELLDA 98 (166)
T ss_pred HHhhC--CCCEEEEECCCcEECccHHHHHHHH
Confidence 22223 36899999999998766 5555553
No 45
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=55.38 E-value=81 Score=27.17 Aligned_cols=94 Identities=11% Similarity=0.030 Sum_probs=46.2
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHH--hhCCCccEEEEEecCccccCccchhhhhhhcCcchhHH
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTIT--ATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYAR 145 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~--~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~R 145 (342)
...+..+|.||+..+..+..+.+.|+.++.+. ...+.++ ...+..++.+...+. .. ..+. ..++
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d-~t~~~~~~~~~~~~~~v~~~~~~~---~~--~~g~--------~~a~ 74 (229)
T cd04192 9 AENLPRLLQSLSALDYPKEKFEVILVDDHSTD-GTVQILEFAAAKPNFQLKILNNSR---VS--ISGK--------KNAL 74 (229)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEcCCCCc-ChHHHHHHHHhCCCcceEEeeccC---cc--cchh--------HHHH
Confidence 34567789999887654334777776665432 2222222 223333333332221 00 0110 1122
Q ss_pred HhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 146 IYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 146 l~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
....... .-+-|+++|+|.++..| |..+..
T Consensus 75 n~g~~~~--~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 75 TTAIKAA--KGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHHHh--cCCEEEEECCCcccCHHHHHHHHH
Confidence 2221222 35899999999988654 333443
No 46
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=55.23 E-value=64 Score=27.13 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=45.4
Q ss_pred CCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccc
Q 042515 54 PSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLV 125 (342)
Q Consensus 54 ~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~ 125 (342)
.+.+-+|.++.+++...+.-++.||.++-+. . .+.+..-++++..++ .|+..+++ +++..||.+..
T Consensus 59 ~~~vvfVSa~S~~h~~~~~~~i~si~~~~P~-~--k~ilY~LgL~~~~i~-~L~~~~~n--~evr~Fn~s~Y 124 (142)
T PF07801_consen 59 SSDVVFVSATSDNHFNESMKSISSIRKFYPN-H--KIILYDLGLSEEQIK-KLKKNFCN--VEVRKFNFSKY 124 (142)
T ss_pred CCccEEEEEecchHHHHHHHHHHHHHHHCCC-C--cEEEEeCCCCHHHHH-HHHhcCCc--eEEEECCCccC
Confidence 3456677888889999999999999999874 3 334445577765554 45444564 56777776543
No 47
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=52.53 E-value=1.9e+02 Score=26.51 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=25.3
Q ss_pred ccCcEEEEecceEEecc-hHHHHccccCCCeEEeec
Q 042515 155 TVGRIIYFDSDLIVVDD-VAKLWSINLRGRVLGAPE 189 (342)
Q Consensus 155 ~vdRvIYLDsDiiV~~D-i~~L~~~dl~~~~iaA~~ 189 (342)
..+-++.+|+|+++..| |..+...-..+.-+|++.
T Consensus 95 ~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq 130 (254)
T cd04191 95 RYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQ 130 (254)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 47899999999999876 777776433344466664
No 48
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=52.51 E-value=1.7e+02 Score=25.89 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=55.1
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
..+-|++.+=+. ...+..++.|+++....+..+.+.|+.++.+. ...+.+++ +...+++++..+.. .+ .
T Consensus 29 ~~isVvip~~n~-~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d-~t~~~~~~-~~~~~v~~i~~~~~--~g---~--- 97 (251)
T cd06439 29 PTVTIIIPAYNE-EAVIEAKLENLLALDYPRDRLEIIVVSDGSTD-GTAEIARE-YADKGVKLLRFPER--RG---K--- 97 (251)
T ss_pred CEEEEEEecCCc-HHHHHHHHHHHHhCcCCCCcEEEEEEECCCCc-cHHHHHHH-HhhCcEEEEEcCCC--CC---h---
Confidence 356677665322 35567789999876543333667666665432 22333322 22113444432211 11 0
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
..++...-+... -|-++++|+|+++..+ +.++++.
T Consensus 98 -------~~a~n~gi~~a~--~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 98 -------AAALNRALALAT--GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred -------HHHHHHHHHHcC--CCEEEEEccccCcCHHHHHHHHHH
Confidence 122332222232 3889999999999766 7777765
No 49
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=52.46 E-value=1.2e+02 Score=24.16 Aligned_cols=90 Identities=12% Similarity=-0.000 Sum_probs=45.6
Q ss_pred hchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCC--ccEEEEEecCccccCccchhhhhhhcCcchhHHH
Q 042515 69 RGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPY--LNFEIYRFDTNLVKGKISYSIRQALDQPLNYARI 146 (342)
Q Consensus 69 ~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~--~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl 146 (342)
..+..++.|++..+. ..+.+.|+.++.+... ...+.+.... ..+.+.. ..+. .+ .. .+|.
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t-~~~~~~~~~~~~~~~~~~~-~~~~-~g-~~------------~~~n 71 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDDT-LEILEELAALYIRRVLVVR-DKEN-GG-KA------------GALN 71 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccch-HHHHHHHhccccceEEEEE-eccc-CC-ch------------HHHH
Confidence 566778999998764 3477777766644322 2222222111 1122221 1111 11 11 1222
Q ss_pred hhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 147 YLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 147 ~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
..-+... -+-++++|+|.++..+ |.+++..
T Consensus 72 ~~~~~~~--~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 72 AGLRHAK--GDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred HHHHhcC--CCEEEEECCCCCcChHHHHHHHHH
Confidence 2222223 5889999999999776 5666343
No 50
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=51.01 E-value=1.3e+02 Score=26.37 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=16.0
Q ss_pred cCcEEEEecceEEecc-hHHHHc
Q 042515 156 VGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 156 vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
.|=|+++|+|+++-.| |.++.+
T Consensus 85 ~d~i~~lD~D~~~~~~~l~~l~~ 107 (236)
T cd06435 85 AEIIAVIDADYQVEPDWLKRLVP 107 (236)
T ss_pred CCEEEEEcCCCCcCHHHHHHHHH
Confidence 6789999999988654 444443
No 51
>PRK15383 type III secretion system protein; Provisional
Probab=50.89 E-value=7 Score=35.71 Aligned_cols=23 Identities=30% Similarity=0.716 Sum_probs=20.3
Q ss_pred CcEEEEecceEEecchHHHHccc
Q 042515 157 GRIIYFDSDLIVVDDVAKLWSIN 179 (342)
Q Consensus 157 dRvIYLDsDiiV~~Di~~L~~~d 179 (342)
+-+||||+|+|+.+.+.-|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 67999999999999999888654
No 52
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=50.52 E-value=7.2 Score=35.66 Aligned_cols=24 Identities=29% Similarity=0.638 Sum_probs=20.7
Q ss_pred cCcEEEEecceEEecchHHHHccc
Q 042515 156 VGRIIYFDSDLIVVDDVAKLWSIN 179 (342)
Q Consensus 156 vdRvIYLDsDiiV~~Di~~L~~~d 179 (342)
-+-+||||+|+|+.+.+.-|+.-|
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CCceEEeecceeeecccccEEcCC
Confidence 367999999999999999888654
No 53
>PRK15384 type III secretion system protein; Provisional
Probab=50.46 E-value=6.9 Score=35.78 Aligned_cols=23 Identities=22% Similarity=0.603 Sum_probs=20.3
Q ss_pred CcEEEEecceEEecchHHHHccc
Q 042515 157 GRIIYFDSDLIVVDDVAKLWSIN 179 (342)
Q Consensus 157 dRvIYLDsDiiV~~Di~~L~~~d 179 (342)
+-+||||+|+|+.+.+.-|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 67999999999999999888654
No 54
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=49.12 E-value=1.8e+02 Score=25.66 Aligned_cols=105 Identities=10% Similarity=0.034 Sum_probs=51.4
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecCccccCccchhhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
.+-|++.+=.. -..+.-++.|++...-.+..+.+.|+.++.+.+. ...+++. .+. .+++..+....-.+ .+
T Consensus 2 ~vsIiIp~~Ne-~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t-~~i~~~~~~~~-~~~i~~~~~~~~~G-~~---- 73 (241)
T cd06427 2 VYTILVPLYKE-AEVLPQLIASLSALDYPRSKLDVKLLLEEDDEET-IAAARALRLPS-IFRVVVVPPSQPRT-KP---- 73 (241)
T ss_pred eEEEEEecCCc-HHHHHHHHHHHHhCcCCcccEEEEEEECCCCchH-HHHHHHhccCC-CeeEEEecCCCCCc-hH----
Confidence 35566666322 2456788999987543334567766666544322 2233321 211 23333332211011 11
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.++-..-+.- .-+=|+++|+|+++-.| +.++...
T Consensus 74 --------~a~n~g~~~a--~gd~i~~~DaD~~~~~~~l~~~~~~ 108 (241)
T cd06427 74 --------KACNYALAFA--RGEYVVIYDAEDAPDPDQLKKAVAA 108 (241)
T ss_pred --------HHHHHHHHhc--CCCEEEEEcCCCCCChHHHHHHHHH
Confidence 1111211222 24789999999887554 4455543
No 55
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=46.44 E-value=1.8e+02 Score=24.56 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=46.1
Q ss_pred hchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHhh
Q 042515 69 RGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYL 148 (342)
Q Consensus 69 ~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~l 148 (342)
..+.-++.|++..+.. ...+.|+.++.+.+.....+++......++++....+ .+ + ..+|...
T Consensus 13 ~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i~~~~n--~G-~------------~~a~N~g 75 (201)
T cd04195 13 EFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKN--RG-L------------GKALNEG 75 (201)
T ss_pred HHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHHHHHhcCCeEEEEcCcc--cc-H------------HHHHHHH
Confidence 4567799999987643 3566666666544344433332111112444432211 01 1 2233332
Q ss_pred hhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 149 ADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 149 ~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
-..- .-+=++++|+|.+...+ +..+.+
T Consensus 76 ~~~a--~gd~i~~lD~Dd~~~~~~l~~~~~ 103 (201)
T cd04195 76 LKHC--TYDWVARMDTDDISLPDRFEKQLD 103 (201)
T ss_pred HHhc--CCCEEEEeCCccccCcHHHHHHHH
Confidence 2322 35789999999887654 444444
No 56
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=45.15 E-value=53 Score=30.75 Aligned_cols=84 Identities=13% Similarity=0.080 Sum_probs=49.8
Q ss_pred hhc-hHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHH
Q 042515 68 LRG-SVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARI 146 (342)
Q Consensus 68 l~~-~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl 146 (342)
++. +..++.|+.++++. ..+++++.+ ++..-+ .+|.. +-...-.+.++.. +. .-+.|+
T Consensus 59 aP~~Vk~ci~s~~k~~~~---~~Vi~lt~~----Ni~~Yv--~~P~~------i~~k~~~g~i~~a----~~--SDilR~ 117 (276)
T PF05704_consen 59 APEIVKKCINSWRKNAPD---YEVILLTED----NIKDYV--DIPDF------ILEKYEKGKISPA----HF--SDILRL 117 (276)
T ss_pred cCHHHHHHHHHHHHHCCC---CeEEEEChH----HHHHHc--CCchh------HHHHHHcCCCchh----HH--HHHHHH
Confidence 444 57889999999853 677887753 444333 23320 0011112223221 11 357788
Q ss_pred hhhhhcccccCcEEEEecceEEecchHHHHc
Q 042515 147 YLADLLPLTVGRIIYFDSDLIVVDDVAKLWS 177 (342)
Q Consensus 147 ~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~ 177 (342)
.|=.--.. +|+|+++++.++|.+.+.
T Consensus 118 ~LL~~yGG-----vWiDatv~~t~~l~~~~~ 143 (276)
T PF05704_consen 118 ALLYKYGG-----VWIDATVYLTKPLDDEIF 143 (276)
T ss_pred HHHHHcCc-----EEeCCceEECCchhHHHh
Confidence 76444443 899999999999998754
No 57
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=45.10 E-value=1.5e+02 Score=24.97 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=52.9
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHH---hhCCCccEEEEEecCccccCccchhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTIT---ATFPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~---~~~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
+-|++.+-..-+..+..++.||+..+. ..+.+.|+.++.+.......++ ...+. ++++....+ ..+
T Consensus 3 vsiii~~~n~~~~~l~~~l~sl~~q~~--~~~eiivvd~gs~d~~~~~~~~~~~~~~~~--~~~~~~~~~---~g~---- 71 (202)
T cd04184 3 ISIVMPVYNTPEKYLREAIESVRAQTY--PNWELCIADDASTDPEVKRVLKKYAAQDPR--IKVVFREEN---GGI---- 71 (202)
T ss_pred EEEEEecccCcHHHHHHHHHHHHhCcC--CCeEEEEEeCCCCChHHHHHHHHHHhcCCC--EEEEEcccC---CCH----
Confidence 456666544445778889999998754 2466766666543322332222 22232 333321111 001
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
..++...-+... -+=++.+|+|.++..| +..+.+
T Consensus 72 --------~~a~n~g~~~a~--~d~i~~ld~D~~~~~~~l~~~~~ 106 (202)
T cd04184 72 --------SAATNSALELAT--GEFVALLDHDDELAPHALYEVVK 106 (202)
T ss_pred --------HHHHHHHHHhhc--CCEEEEECCCCcCChHHHHHHHH
Confidence 122333222222 4789999999998766 555554
No 58
>PRK10018 putative glycosyl transferase; Provisional
Probab=43.60 E-value=2.7e+02 Score=25.84 Aligned_cols=103 Identities=16% Similarity=0.056 Sum_probs=54.8
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCH-HHHHHHHHhhCCCccEEEEEecCccccCccchhh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQR-LELSRTITATFPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~-~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
..+-|++.+-. -...+..+|.|++..+- .++.+.|+.|+.+. +.+++.+. .+...++++...+.. .+
T Consensus 5 p~VSVIip~yN-~~~~l~~~l~Svl~Qt~--~~~EiIVVDDgS~~~~~~~~~~~-~~~~~ri~~i~~~~n-------~G- 72 (279)
T PRK10018 5 PLISIYMPTWN-RQQLAIRAIKSVLRQDY--SNWEMIIVDDCSTSWEQLQQYVT-ALNDPRITYIHNDIN-------SG- 72 (279)
T ss_pred CEEEEEEEeCC-CHHHHHHHHHHHHhCCC--CCeEEEEEECCCCCHHHHHHHHH-HcCCCCEEEEECCCC-------CC-
Confidence 45777777642 22234578999997654 34777776665442 22333332 222223444332111 01
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
...+|...-+.- .-+-|++||+|.++..+ |..+.+.
T Consensus 73 -------~~~a~N~gi~~a--~g~~I~~lDaDD~~~p~~l~~~~~~ 109 (279)
T PRK10018 73 -------ACAVRNQAIMLA--QGEYITGIDDDDEWTPNRLSVFLAH 109 (279)
T ss_pred -------HHHHHHHHHHHc--CCCEEEEECCCCCCCccHHHHHHHH
Confidence 122333322222 24789999999988776 6666653
No 59
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=43.35 E-value=18 Score=32.49 Aligned_cols=23 Identities=30% Similarity=0.674 Sum_probs=20.0
Q ss_pred hhhhcccccCcEEEEecceEEecc
Q 042515 148 LADLLPLTVGRIIYFDSDLIVVDD 171 (342)
Q Consensus 148 l~~llp~~vdRvIYLDsDiiV~~D 171 (342)
++.+|| .++-|++||+|+-|+..
T Consensus 35 va~~L~-~~~~vlflDaDigVvNp 57 (222)
T PF03314_consen 35 VAKILP-EYDWVLFLDADIGVVNP 57 (222)
T ss_pred HHHHhc-cCCEEEEEcCCceeecC
Confidence 678899 49999999999988764
No 60
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=43.22 E-value=2.1e+02 Score=24.36 Aligned_cols=104 Identities=16% Similarity=0.139 Sum_probs=53.2
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHH--HHHHHhhCCCccEEEEEecCccccCccchhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLEL--SRTITATFPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l--~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
+-|++.+- |....+..+|.||++..- .++.+.|+.++.+.+.. .+.+...++.++++++..+.+ . + ....
T Consensus 3 vsviip~~-n~~~~l~~~L~sl~~q~~--~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-~-g-~~~~-- 74 (196)
T cd02520 3 VSILKPLC-GVDPNLYENLESFFQQDY--PKYEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEK-V-G-INPK-- 74 (196)
T ss_pred eEEEEecC-CCCccHHHHHHHHHhccC--CCeEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCc-C-C-CCHh--
Confidence 55666654 234456788999987653 23777777666543222 223334566655555543321 1 1 1000
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
.......-+.- ..+=++++|+|+++..+ |..+.+
T Consensus 75 -------~~~~n~g~~~a--~~d~i~~~D~D~~~~~~~l~~l~~ 109 (196)
T cd02520 75 -------VNNLIKGYEEA--RYDILVISDSDISVPPDYLRRMVA 109 (196)
T ss_pred -------HHHHHHHHHhC--CCCEEEEECCCceEChhHHHHHHH
Confidence 00111111111 35889999999987543 344443
No 61
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=43.02 E-value=46 Score=31.79 Aligned_cols=121 Identities=11% Similarity=0.093 Sum_probs=64.8
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCC--CCCEEEEEEecCcCHHHHHHHHHh-hCCCccEEEEEecCccccC-ccc
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATC--PENIVFHFISTQRQRLELSRTITA-TFPYLNFEIYRFDTNLVKG-KIS 130 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~--~~~i~fhil~~~~s~~~l~~~l~~-~~p~~~~~~~~~d~~~~~~-~i~ 130 (342)
.+|.|++-++..-...+...+.+++..... .+++.||++............... .....+++-..-....+.. ...
T Consensus 25 GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 104 (317)
T PF13896_consen 25 GPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFPTSCDSIEANLSSPFSCSDFVRLLSELTSRENN 104 (317)
T ss_pred CCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCcccccccccccCCCCCcCchhhhHHHHhhhhhh
Confidence 688888888776666556667776543321 257999998775432111100000 0000011000000000100 000
Q ss_pred hhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHc
Q 042515 131 YSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWS 177 (342)
Q Consensus 131 ~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~ 177 (342)
.........|.|+.|-.+-+-.. -+-|+.+|.|++...++.+-+.
T Consensus 105 ~~~~~~~~YPiN~LRNvAr~~a~--T~~v~~~DvD~~ps~~l~~~l~ 149 (317)
T PF13896_consen 105 YDPAPNALYPINLLRNVARSGAR--TDYVFLLDVDFLPSPGLYEKLL 149 (317)
T ss_pred cccccCCCCChHHHHHHHHHhcC--cceEEEecceeeeCcchHHHHH
Confidence 00112345678899988766554 6899999999999999988653
No 62
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=42.21 E-value=1.6e+02 Score=22.68 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=21.4
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCH
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQR 99 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~ 99 (342)
...+..++.|+.+... ....++++.++.+.
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~~ 38 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGSTD 38 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCCc
Confidence 4566788999998864 34778887776554
No 63
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=41.57 E-value=2.2e+02 Score=24.08 Aligned_cols=90 Identities=16% Similarity=0.116 Sum_probs=46.7
Q ss_pred hchHHHHHHHHHhcCCCCCEEEEEEecCcCHH--HHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHH
Q 042515 69 RGSVAGVFSVLQHATCPENIVFHFISTQRQRL--ELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARI 146 (342)
Q Consensus 69 ~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~--~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl 146 (342)
..+..++.|++..+.. .+.+.|+.++.+.+ ++.+.+....|. .+.++..+.. .+ ... .+.
T Consensus 11 ~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~~~~~-~~~~~~~~~~--~G-~~~------------~~n 72 (214)
T cd04196 11 KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYIDKDPF-IIILIRNGKN--LG-VAR------------NFE 72 (214)
T ss_pred HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHhcCCc-eEEEEeCCCC--cc-HHH------------HHH
Confidence 4566789999886542 57777776654321 222223233431 2222221110 01 000 111
Q ss_pred hhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 147 YLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 147 ~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
..... . .-+-|++||+|.+...+ |..+.+.
T Consensus 73 ~g~~~-~-~g~~v~~ld~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 73 SLLQA-A-DGDYVFFCDQDDIWLPDKLERLLKA 103 (214)
T ss_pred HHHHh-C-CCCEEEEECCCcccChhHHHHHHHH
Confidence 11111 2 36889999999877665 8888876
No 64
>PRK11204 N-glycosyltransferase; Provisional
Probab=36.89 E-value=2.9e+02 Score=26.88 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=53.9
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHH--HHHHHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLE--LSRTITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~--l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
..+.|++.+=++ ...+..++.|+++.+- | ++.+.|+.|+.+.+. +.+.+.+.+|+ +++.....+ .+ ....
T Consensus 54 p~vsViIp~yne-~~~i~~~l~sl~~q~y-p-~~eiiVvdD~s~d~t~~~l~~~~~~~~~--v~~i~~~~n--~G-ka~a 125 (420)
T PRK11204 54 PGVSILVPCYNE-GENVEETISHLLALRY-P-NYEVIAINDGSSDNTGEILDRLAAQIPR--LRVIHLAEN--QG-KANA 125 (420)
T ss_pred CCEEEEEecCCC-HHHHHHHHHHHHhCCC-C-CeEEEEEECCCCccHHHHHHHHHHhCCc--EEEEEcCCC--CC-HHHH
Confidence 457777765322 2456678899887543 2 578877777644322 22223344554 333322211 11 1111
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
+-..-+. . ..|-++.+|+|.++..| +.++.+.
T Consensus 126 ------------ln~g~~~-a-~~d~i~~lDaD~~~~~d~L~~l~~~ 158 (420)
T PRK11204 126 ------------LNTGAAA-A-RSEYLVCIDGDALLDPDAAAYMVEH 158 (420)
T ss_pred ------------HHHHHHH-c-CCCEEEEECCCCCCChhHHHHHHHH
Confidence 1111111 1 36899999999998776 5556554
No 65
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=35.52 E-value=2.2e+02 Score=27.52 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=29.3
Q ss_pred chhHHHhhhhhcccccCcEEEEecceEEecchHHH
Q 042515 141 LNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKL 175 (342)
Q Consensus 141 ~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L 175 (342)
.+|+|.+.-.+.- +-+-+|-|||-+.+..+=+++
T Consensus 103 p~~AR~la~~l~~-gE~y~LqiDSH~rF~~~WD~~ 136 (343)
T PF11397_consen 103 PCWARYLAQKLYR-GEDYYLQIDSHMRFVPGWDEI 136 (343)
T ss_pred hHHHHHHHHHHhC-CCeEEEEEeccceeeccHHHH
Confidence 4899999999887 589999999999999886653
No 66
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=30.64 E-value=2.1e+02 Score=26.24 Aligned_cols=25 Identities=12% Similarity=0.444 Sum_probs=20.2
Q ss_pred ccCcEEEEecceEEe-cchHHHHcccc
Q 042515 155 TVGRIIYFDSDLIVV-DDVAKLWSINL 180 (342)
Q Consensus 155 ~vdRvIYLDsDiiV~-~Di~~L~~~dl 180 (342)
..+|||+|+ |+++. .|+-+|....-
T Consensus 112 ~fd~VlfLN-DV~f~~~Dil~LL~~~~ 137 (241)
T PF11735_consen 112 RFDKVLFLN-DVFFCPEDILELLFTRN 137 (241)
T ss_pred CcCEEEEec-CcccCHHHHHHHHhhcC
Confidence 479999999 86664 89999987655
No 67
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=29.06 E-value=4.4e+02 Score=25.35 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=54.7
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCH--HHHHHHHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQR--LELSRTITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~--~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
..+-|++.+= |-...+.-++.|+++..- | ++.+.++.++.+. ..+.+.+++.+|+.++++. .+.+. .+ ....
T Consensus 41 p~VSViiP~~-nee~~l~~~L~Sl~~q~Y-p-~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v-~~~~~-~G-~~~K 114 (373)
T TIGR03472 41 PPVSVLKPLH-GDEPELYENLASFCRQDY-P-GFQMLFGVQDPDDPALAVVRRLRADFPDADIDLV-IDARR-HG-PNRK 114 (373)
T ss_pred CCeEEEEECC-CCChhHHHHHHHHHhcCC-C-CeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEE-ECCCC-CC-CChH
Confidence 3577777653 223456678999988654 2 3777665554332 1233445567887666554 22221 11 1111
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchH
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVA 173 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~ 173 (342)
. .+.... +.. - ..|-++++|+|+++..|--
T Consensus 115 ~-------~~l~~~-~~~-a--~ge~i~~~DaD~~~~p~~L 144 (373)
T TIGR03472 115 V-------SNLINM-LPH-A--RHDILVIADSDISVGPDYL 144 (373)
T ss_pred H-------HHHHHH-HHh-c--cCCEEEEECCCCCcChhHH
Confidence 0 111121 222 1 3688999999999966543
No 68
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=28.89 E-value=1.7e+02 Score=25.64 Aligned_cols=23 Identities=17% Similarity=0.322 Sum_probs=20.5
Q ss_pred CcEEEEecceEEecchHHHHccc
Q 042515 157 GRIIYFDSDLIVVDDVAKLWSIN 179 (342)
Q Consensus 157 dRvIYLDsDiiV~~Di~~L~~~d 179 (342)
+.++.+.+|+++.-|+.++.+..
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999998754
No 69
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=27.26 E-value=4.9e+02 Score=23.87 Aligned_cols=94 Identities=17% Similarity=0.123 Sum_probs=47.3
Q ss_pred hchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHhh
Q 042515 69 RGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYL 148 (342)
Q Consensus 69 ~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~l 148 (342)
..+...+.|+.+... +.++.|.|+.++.+. .....+.+.........+..... -...++. +-+|-..
T Consensus 17 ~~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~-~~~~~l~~~~~~~~~~~~i~~~~-~~~~f~~----------a~arN~g 83 (281)
T PF10111_consen 17 ERLRNCLESLSQFQS-DPDFEIIVVDDGSSD-EFDEELKKLCEKNGFIRYIRHED-NGEPFSR----------AKARNIG 83 (281)
T ss_pred HHHHHHHHHHHhcCC-CCCEEEEEEECCCch-hHHHHHHHHHhccCceEEEEcCC-CCCCcCH----------HHHHHHH
Confidence 344455677766544 356777666555443 32223332222212221211111 0011221 3456666
Q ss_pred hhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 149 ADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 149 ~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
.+.-. -+-|+++|+|+++-.| |..+.+
T Consensus 84 ~~~A~--~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 84 AKYAR--GDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HHHcC--CCEEEEEcCCeeeCHHHHHHHHH
Confidence 55553 5899999999999665 444555
No 70
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=26.97 E-value=4.1e+02 Score=22.83 Aligned_cols=97 Identities=11% Similarity=0.046 Sum_probs=50.3
Q ss_pred hhchHHHHHHHHHhcCCCCCEEEEEEecCcCHH--HHHHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHH
Q 042515 68 LRGSVAGVFSVLQHATCPENIVFHFISTQRQRL--ELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYAR 145 (342)
Q Consensus 68 l~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~--~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~R 145 (342)
...+..+|.||+..+-. ..+.+.|+.++.+.. .+.+......+..++++...... ... ..+ ..++|
T Consensus 9 ~~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~-~~~--~~G--------~~~a~ 76 (219)
T cd06913 9 EQWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHN-SPS--PKG--------VGYAK 76 (219)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEeccc-CCC--Ccc--------HHHHH
Confidence 45667789999876542 347777776654321 12222222333323343322211 000 011 24556
Q ss_pred HhhhhhcccccCcEEEEecceEEec-chHHHHcc
Q 042515 146 IYLADLLPLTVGRIIYFDSDLIVVD-DVAKLWSI 178 (342)
Q Consensus 146 l~l~~llp~~vdRvIYLDsDiiV~~-Di~~L~~~ 178 (342)
....+.-. -+-+++||+|.++.. .+..+...
T Consensus 77 N~g~~~a~--gd~i~~lD~D~~~~~~~l~~~~~~ 108 (219)
T cd06913 77 NQAIAQSS--GRYLCFLDSDDVMMPQRIRLQYEA 108 (219)
T ss_pred HHHHHhcC--CCEEEEECCCccCChhHHHHHHHH
Confidence 55444443 489999999987655 45665544
No 71
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=26.08 E-value=72 Score=31.11 Aligned_cols=145 Identities=12% Similarity=0.031 Sum_probs=70.4
Q ss_pred cccccCcEEEEecceEEecchHHHHccccCCCe---EEeecccc--cCccc-ccCccCCCCcccc--CCCCCCCCcccee
Q 042515 152 LPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRV---LGAPEYCH--ANFTN-YFTSKFWSNPVFS--GTVKGRRPCYFNT 223 (342)
Q Consensus 152 lp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~---iaA~~d~~--~~~~~-~~~~~~w~~~~~~--~~~~~~~~~yFNs 223 (342)
.| +.+-+=+||.|.+++.---+|=+.-++.+. .+-.++.. .++.. -.+...|+..... .-+...+..++|+
T Consensus 173 yP-~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~na 251 (364)
T KOG4748|consen 173 YP-DAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINA 251 (364)
T ss_pred CC-CCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhhhceecccCCCCccc
Confidence 57 599999999999998865555443333211 11121100 00000 0011122222111 1123456778999
Q ss_pred eEEEEehhHHhhccHHHHHHHHHHHhc-ccccccCCCcchhhhh------hcCceEecCcccc-ccCCCCCccccccccC
Q 042515 224 GVMVIDLRKWREGRYTEKLEYWMRVQK-KYRIYELGSLPPFLLV------FAGDVEGVEHRWN-QHGLGGDNLEGLCRNL 295 (342)
Q Consensus 224 GVmlinL~~wR~~~~~~~~~~~~~~~~-~~~~~~~~DQd~lN~v------f~~~i~~L~~~wN-~~~~~~~~~~~~~~~~ 295 (342)
|=+|+- ...++.-++++...-- ....+...+|+++-.. +.+.|..|+.|+= ....+ +...+ -
T Consensus 252 GSfLir-----ns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l~~~vgilp~r~ins~~~~-~~~~g----~ 321 (364)
T KOG4748|consen 252 GSFLIR-----NSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQLHSHVGILPLRYINSYPNG-APGYG----Y 321 (364)
T ss_pred cceEEe-----cCccchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhhhhheeeccHHHHhcCCCC-CCCCc----c
Confidence 999994 3334444444332100 0122334466665433 5667888888763 22211 11111 1
Q ss_pred CCCCcEEEeccCC
Q 042515 296 HPGPVSLLHWSGK 308 (342)
Q Consensus 296 ~~~~~~IiHy~g~ 308 (342)
+ +..-++||.|=
T Consensus 322 ~-egdlvvhFaGC 333 (364)
T KOG4748|consen 322 E-EGDLVVHFAGC 333 (364)
T ss_pred c-cCCeEEEeccc
Confidence 1 23479999993
No 72
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=24.58 E-value=4.6e+02 Score=22.63 Aligned_cols=100 Identities=11% Similarity=0.003 Sum_probs=50.6
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHh---hCCCccEEEEEecCccccCccchhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITA---TFPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~---~~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
+.|++.+=. -...+.-++.|+.+....+.++.+.|+.++.+ ++....+++ ..+. +++.. +.. .+ ..
T Consensus 2 ~sIiip~~n-~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~-d~~~~~~~~~~~~~~~--v~~i~-~~~--~~-~~--- 70 (249)
T cd02525 2 VSIIIPVRN-EEKYIEELLESLLNQSYPKDLIEIIVVDGGST-DGTREIVQEYAAKDPR--IRLID-NPK--RI-QS--- 70 (249)
T ss_pred EEEEEEcCC-chhhHHHHHHHHHhccCCCCccEEEEEeCCCC-ccHHHHHHHHHhcCCe--EEEEe-CCC--CC-ch---
Confidence 345555422 23456778999987665335577776655533 233333322 2222 23322 111 11 11
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.++...-+.. ..+-++++|+|.++..+ |.++.+.
T Consensus 71 ---------~a~N~g~~~a--~~d~v~~lD~D~~~~~~~l~~~~~~ 105 (249)
T cd02525 71 ---------AGLNIGIRNS--RGDIIIRVDAHAVYPKDYILELVEA 105 (249)
T ss_pred ---------HHHHHHHHHh--CCCEEEEECCCccCCHHHHHHHHHH
Confidence 1222222222 36899999999988655 5666643
No 73
>CHL00031 psbT photosystem II protein T
Probab=24.25 E-value=43 Score=20.70 Aligned_cols=11 Identities=36% Similarity=0.552 Sum_probs=8.2
Q ss_pred cccCCCCCCCC
Q 042515 26 RFREAPAFRNG 36 (342)
Q Consensus 26 ~~~~~~~~~~~ 36 (342)
-|||+|...+.
T Consensus 22 ~FRePPri~kk 32 (33)
T CHL00031 22 FFREPPKVPTK 32 (33)
T ss_pred eecCCCCCCCC
Confidence 59999976543
No 74
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=23.44 E-value=1.2e+02 Score=26.26 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=46.4
Q ss_pred ceEEEEe-CcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHH--HHHHHHhhCCCccEEEEEecCccccCccchhh
Q 042515 57 IHISMTL-DSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLE--LSRTITATFPYLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 57 i~I~~~~-D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~--l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
|-|++.+ ++. ..+.-+|.|++...- .++.++|+.++.+.+. ..+.+.+.+|...+++.....+ . + +.+.
T Consensus 3 v~Vvip~~~~~--~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~-~-g--~~~k 74 (228)
T PF13641_consen 3 VSVVIPAYNED--DVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRN-P-G--PGGK 74 (228)
T ss_dssp EEEE--BSS-H--HHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE-----H-H--HHHH
T ss_pred EEEEEEecCCH--HHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCC-C-C--cchH
Confidence 4555554 332 245568888886433 3488888776544321 1223445677655665433211 0 0 0000
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.. +. ...+.. . ..+-|+++|+|+++-.| |.++.+.
T Consensus 75 ~~------a~-n~~~~~-~--~~d~i~~lD~D~~~~p~~l~~~~~~ 110 (228)
T PF13641_consen 75 AR------AL-NEALAA-A--RGDYILFLDDDTVLDPDWLERLLAA 110 (228)
T ss_dssp HH------HH-HHHHHH------SEEEEE-SSEEE-CHHHHHHHHH
T ss_pred HH------HH-HHHHHh-c--CCCEEEEECCCcEECHHHHHHHHHH
Confidence 00 01 111221 2 26899999999999554 5554444
No 75
>PRK10063 putative glycosyl transferase; Provisional
Probab=22.76 E-value=5.5e+02 Score=23.09 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=15.6
Q ss_pred cCcEEEEecceEEecchHHH
Q 042515 156 VGRIIYFDSDLIVVDDVAKL 175 (342)
Q Consensus 156 vdRvIYLDsDiiV~~Di~~L 175 (342)
-+-|++||+|-++..+..++
T Consensus 83 g~~v~~ld~DD~~~~~~~~~ 102 (248)
T PRK10063 83 GRFALFLNSGDIFHQDAANF 102 (248)
T ss_pred CCEEEEEeCCcccCcCHHHH
Confidence 47899999998888875443
No 76
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=22.20 E-value=7.7e+02 Score=24.36 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=53.3
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHH--HHHHHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLE--LSRTITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~--l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
..+.|++.+=++- ..+..++.|+++.+- | ++.+.++.|+.+.+. ..+.+.+..|+ +++.....+ .+ ....
T Consensus 75 p~vsViIP~yNE~-~~i~~~l~sll~q~y-p-~~eIivVdDgs~D~t~~~~~~~~~~~~~--v~vv~~~~n--~G-ka~A 146 (444)
T PRK14583 75 PLVSILVPCFNEG-LNARETIHAALAQTY-T-NIEVIAINDGSSDDTAQVLDALLAEDPR--LRVIHLAHN--QG-KAIA 146 (444)
T ss_pred CcEEEEEEeCCCH-HHHHHHHHHHHcCCC-C-CeEEEEEECCCCccHHHHHHHHHHhCCC--EEEEEeCCC--CC-HHHH
Confidence 3577776663222 345678899887654 2 588888877654322 11223234554 344432211 11 1111
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
.+++ + .. . ..|-++.+|+|.+...| +.++.+
T Consensus 147 --------lN~g---l-~~-a-~~d~iv~lDAD~~~~~d~L~~lv~ 178 (444)
T PRK14583 147 --------LRMG---A-AA-A-RSEYLVCIDGDALLDKNAVPYLVA 178 (444)
T ss_pred --------HHHH---H-Hh-C-CCCEEEEECCCCCcCHHHHHHHHH
Confidence 1111 1 11 1 36899999999999776 445544
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=20.41 E-value=3.6e+02 Score=26.81 Aligned_cols=96 Identities=13% Similarity=0.128 Sum_probs=52.7
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcC-HHHHHHHHHh---hCCCccEEEEEecCccccCccch
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQ-RLELSRTITA---TFPYLNFEIYRFDTNLVKGKISY 131 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s-~~~l~~~l~~---~~p~~~~~~~~~d~~~~~~~i~~ 131 (342)
...|+++.-..=--.++-+++|++..++. +-+.=.|+.|+.| .+.|++.|.+ .|.. .+..|..+.-+++|..
T Consensus 156 t~SVviVFHNEGws~LmRTVHSVi~RsP~-~~l~eivlvDDfSdKehLkekLDeYv~~fnG---lVkV~Rne~REGLI~a 231 (603)
T KOG3737|consen 156 TSSVVIVFHNEGWSTLMRTVHSVIKRSPR-KYLAEIVLVDDFSDKEHLKEKLDEYVKLFNG---LVKVFRNERREGLIQA 231 (603)
T ss_pred cceEEEEEecCccHHHHHHHHHHHhcCcH-HhhheEEEeccCCccHHHHHHHHHHHHHhcC---EEEEEecchhhhhhhh
Confidence 34556555433334567799999998873 4455556677654 4567776654 2433 2233333444454432
Q ss_pred hhhhhhcCcchhHHHh-hhhhcccccCcEEEEecceEEecc
Q 042515 132 SIRQALDQPLNYARIY-LADLLPLTVGRIIYFDSDLIVVDD 171 (342)
Q Consensus 132 ~~~~~~~~~~~y~Rl~-l~~llp~~vdRvIYLDsDiiV~~D 171 (342)
|-- +-+-.. +=+||||+-.-|..+
T Consensus 232 -------------RSiGA~~atG---eV~ifLDAHCEVntN 256 (603)
T KOG3737|consen 232 -------------RSIGAQKATG---EVLIFLDAHCEVNTN 256 (603)
T ss_pred -------------hccchhhccc---cEEEEEecceeeecc
Confidence 110 011122 457888888877665
Done!