Query 042515
Match_columns 342
No_of_seqs 254 out of 1387
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:53:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042515.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042515hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 100.0 2.6E-49 8.8E-54 368.7 15.8 261 55-335 4-272 (276)
2 1g9r_A Glycosyl transferase; a 100.0 1.7E-44 5.7E-49 341.7 17.3 254 57-331 1-268 (311)
3 1ll2_A Glycogenin-1; protein-s 100.0 8.8E-31 3E-35 249.6 12.9 214 55-315 3-223 (333)
4 3u2u_A Glycogenin-1, GN-1, GN1 100.0 3.6E-30 1.2E-34 237.2 10.2 210 57-315 6-224 (263)
5 1xhb_A Polypeptide N-acetylgal 75.2 8.7 0.0003 36.8 8.4 132 22-178 3-138 (472)
6 2ffu_A Ppgalnact-2, polypeptid 68.0 19 0.00063 34.8 9.0 129 23-178 41-170 (501)
7 2d7i_A Polypeptide N-acetylgal 67.7 13 0.00043 37.0 7.8 130 23-178 87-220 (570)
8 1qg8_A Protein (spore coat pol 52.4 1E+02 0.0036 25.8 11.6 108 56-177 2-111 (255)
9 1o7q_A N-acetyllactosaminide a 49.5 1.5E+02 0.0051 26.7 18.1 205 55-281 48-261 (289)
10 2p6w_A VP54, putative glycosyl 46.4 22 0.00075 30.3 4.4 19 151-170 69-87 (213)
11 4hg6_A Cellulose synthase subu 37.1 1.4E+02 0.0047 30.8 9.8 43 55-97 140-182 (802)
12 4ayl_A BOGT-metal-independent 32.0 1.5E+02 0.0052 26.0 7.7 203 56-281 2-215 (246)
13 1fo8_A Alpha-1,3-mannosyl-glyc 30.2 3.2E+02 0.011 25.0 10.4 110 57-178 4-122 (343)
14 2z86_A Chondroitin synthase; G 30.0 3.2E+02 0.011 26.6 10.9 104 55-177 93-197 (625)
15 1ym0_B Fibrinotic enzyme compo 28.6 31 0.0011 18.8 1.7 14 29-42 1-14 (27)
16 3ioh_A Histo-blood group ABO s 28.2 3.3E+02 0.011 24.5 18.1 203 55-281 58-270 (298)
17 3bcv_A Putative glycosyltransf 26.2 2.7E+02 0.0091 22.8 10.9 100 55-177 5-107 (240)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=2.6e-49 Score=368.67 Aligned_cols=261 Identities=17% Similarity=0.251 Sum_probs=183.1
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh--CCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT--FPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~--~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
-.|||++|+|++|+++++|+++||++|+++ ++++|||++++++++..+ .|++. ..+.+++++.++.+.+.+...
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~-~L~~~~~~~~~~i~~~~~~~~~~~~~~~-- 79 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLK-DLGEDLKKFSYTLYPIRATDDLFSFAKV-- 79 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHH-HHHHHHHTTTCEEEEEECC-----------
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHH-HHHHHHHHcCCEEEEEEeCHHHHhcCcc--
Confidence 469999999999999999999999999985 689999999999876532 33322 124577888887655544221
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCC
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|+.+||+++|.... |.+......
T Consensus 80 --~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~--------~~~~~~~~~ 149 (276)
T 3tzt_A 80 --TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD--------MANNVNRIR 149 (276)
T ss_dssp ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC----------------------
T ss_pred --ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch--------HHHHHHHhc
Confidence 1345778999999999999779999999999999999999999999999999999875320 111000112
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCc-cccccCCCCCc--cc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEH-RWNQHGLGGDN--LE 289 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~-~wN~~~~~~~~--~~ 289 (342)
+ +...+|||||||||||++||+.++++++++|+++++. + +.++|||+||.+|.++++.||+ +||++...... ..
T Consensus 150 l-~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~-~-~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~ 226 (276)
T 3tzt_A 150 L-GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHM-N-LLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIR 226 (276)
T ss_dssp -------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHH
T ss_pred C-CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccc-c-ccCCChhHHHHHHhCCEEECCchheeeecccchhhhcc
Confidence 2 2235899999999999999999999999999986542 2 2469999999999999999999 99998532110 00
Q ss_pred cc-cccC--CCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCC
Q 042515 290 GL-CRNL--HPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRH 335 (342)
Q Consensus 290 ~~-~~~~--~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 335 (342)
.. ..+. ...+++||||+|+.|||...+.. +++++||+|.....
T Consensus 227 ~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~~~ 272 (276)
T 3tzt_A 227 SKKQADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSLTK 272 (276)
T ss_dssp TTTCCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHHHH
T ss_pred ccchhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHHHH
Confidence 00 0000 01357999999999999987654 59999999976543
No 2
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=100.00 E-value=1.7e-44 Score=341.68 Aligned_cols=254 Identities=21% Similarity=0.302 Sum_probs=188.1
Q ss_pred ceEEEEeCcchhhchHHHHHHH-HHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCC--CccEEEEEecCccccCccchhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSV-LQHATCPENIVFHFISTQRQRLELSRTITATFP--YLNFEIYRFDTNLVKGKISYSI 133 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sl-l~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p--~~~~~~~~~d~~~~~~~i~~~~ 133 (342)
|||++++|++|++++.|+++|| ++|++ .+++|||++++++++.. +.|++... +.+++++.++.+.+.+....
T Consensus 1 m~I~~~~d~~Y~~~~~vli~Sl~l~~~~--~~~~f~il~~~ls~~~~-~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~-- 75 (311)
T 1g9r_A 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD--TEIRFHVLDAGISEANR-AAVAANLRGGGGNIRFIDVNPEDFAGFPLN-- 75 (311)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTCTT--SCCEEEEEESSCCHHHH-HHHHHHSGGGTTTEEEEECCGGGGTTSCCC--
T ss_pred CeEEEECCHhHHHHHHHHHHHHHHHcCC--CCceEEEEECCCCHHHH-HHHHHHHHHcCCEEEEEEcCHHHHhcCccc--
Confidence 7999999999999999999999 88875 56999999999887543 33443322 34677888876655432211
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCC
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTV 213 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~ 213 (342)
..+.++.+|+||++|+++| +++||||||+|+||++||++||+++++|+.+||+.||..+... .|. ...++
T Consensus 76 -~~~~s~~~y~Rl~l~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~-----~~~---~~~~~ 145 (311)
T 1g9r_A 76 -IRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQE-----GYK---QKIGM 145 (311)
T ss_dssp -CTTCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTST-----THH---HHTTC
T ss_pred -cccCCHHHHHHHHHHHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhH-----HHH---HhcCC
Confidence 1345678999999999998 6999999999999999999999999999999999886432100 010 01111
Q ss_pred CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCC--------
Q 042515 214 KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGG-------- 285 (342)
Q Consensus 214 ~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~-------- 285 (342)
....+||||||||||+++||+.++++++++|++.+... +.++|||+||.+|.++++.||++||++....
T Consensus 146 -~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~ 222 (311)
T 1g9r_A 146 -ADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDV--MQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFA 222 (311)
T ss_dssp -CTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTT--CSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----
T ss_pred -CCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHhccCc--CccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcc
Confidence 12467999999999999999999999999999865422 3468999999999999999999999974321
Q ss_pred -Ccccccc--ccCCCCCcEEEeccCCCCCCccCCCCCCCCccccccccc
Q 042515 286 -DNLEGLC--RNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYD 331 (342)
Q Consensus 286 -~~~~~~~--~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~ 331 (342)
.+..+.+ ......+++||||+|+.|||...+.. +...+|..|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~~~~~~ 268 (311)
T 1g9r_A 223 SRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTELA 268 (311)
T ss_dssp CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSSSCCS---TTTHHHHHHH
T ss_pred cccchhhhhHHhhccCCCEEEEeCCcCCCCCCCCCC---ccHHHHHHHH
Confidence 1100111 11223578999999999999987643 3445554443
No 3
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.97 E-value=8.8e-31 Score=249.59 Aligned_cols=214 Identities=17% Similarity=0.270 Sum_probs=146.0
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
+.+.|++++|++|+.++.|+++||++|++. .++.| +++++++.+ .++.|++.+. ++..++. +.........
T Consensus 3 ~~a~vt~~~d~~Yl~~a~vl~~SL~~~~s~-~~l~v-lv~~~is~~-~~~~L~~~~~----~v~~v~~--l~~~~~~~~~ 73 (333)
T 1ll2_A 3 DQAFVTLTTNDAYAKGALVLGSSLKQHRTS-RRLAV-LTTPQVSDT-MRKALEIVFD----EVITVDI--LDSGDSAHLT 73 (333)
T ss_dssp SEEEEEEESSHHHHHHHHHHHHHHHHTTCC-SEEEE-EECTTSCHH-HHHHHHHHCS----EEEECCT--TSTTSTTHHH
T ss_pred ceEEEEEEeCHHHHHHHHHHHHHHHHhCCC-CCEEE-EEcCCCCHH-HHHHHHHhCC----EEEEEee--cCCcchhhcc
Confidence 568899999999999999999999999874 33433 345567754 4556665543 2344432 1111111110
Q ss_pred --hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCC
Q 042515 135 --QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 135 --~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
.......+|+||+++++ + +++||||||+|+||++||++||+++ .+||+.+. .|
T Consensus 74 ~~~~~~~~~t~~Kl~i~~l-~-~ydrvlYLDaD~lv~~di~eLf~~~----~~aAv~d~-----------~~-------- 128 (333)
T 1ll2_A 74 LMKRPELGVTLTKLHCWSL-T-QYSKCVFMDADTLVLANIDDLFERE----ELSAAPDP-----------GW-------- 128 (333)
T ss_dssp HHHCGGGHHHHHHGGGGGC-T-TCSEEEEECTTEEECSCCGGGGGSC----SSEEEECS-----------SS--------
T ss_pred cccccchHHHHHHHHHhHh-c-CCCeEEEEeCCEEeccCHHHHhCCC----ceeEEecC-----------CC--------
Confidence 00112368999999996 5 5999999999999999999999986 35555432 11
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCce-----EecCccccccCCCCCc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDV-----EGVEHRWNQHGLGGDN 287 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i-----~~L~~~wN~~~~~~~~ 287 (342)
+.||||||||||++. ...+++++++... ..+.++||++||.+|.+.+ +.||.+||++......
T Consensus 129 -----~~~fNsGvmlin~~~----~~~~~l~~~~~~~---~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~ 196 (333)
T 1ll2_A 129 -----PDCFNSGVFVYQPSV----ETYNQLLHVASEQ---GSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYS 196 (333)
T ss_dssp -----TTSEEEEEEEECCCH----HHHHHHHHHHHHT---CCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHH
T ss_pred -----CcceeeeEEEEeCCH----HHHHHHHHHHHhc---CCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchh
Confidence 259999999999864 3446676766642 2346799999999998754 7999999998542111
Q ss_pred cccccccCCCCCcEEEeccCCCCCCccC
Q 042515 288 LEGLCRNLHPGPVSLLHWSGKGKPWLRI 315 (342)
Q Consensus 288 ~~~~~~~~~~~~~~IiHy~g~~KPW~~~ 315 (342)
....+... ..+++||||+|+.|||...
T Consensus 197 ~~p~~~~~-~~~~~IiHf~g~~KPW~~~ 223 (333)
T 1ll2_A 197 YLPAFKAF-GANAKVVHFLGQTKPWNYT 223 (333)
T ss_dssp THHHHHHH-GGGCSEEECCSSCCGGGSC
T ss_pred ccHHHHhh-cCCCEEEEECCCCCCCCCC
Confidence 11111111 2467999999999999876
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=99.96 E-value=3.6e-30 Score=237.18 Aligned_cols=210 Identities=17% Similarity=0.255 Sum_probs=143.7
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEE-ecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFI-STQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIRQ 135 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil-~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~ 135 (342)
.=|.+++|++|+.++.|+++||+++++. ..++++ +++++++ .++.|++.+.. +..++. +........ .
T Consensus 6 AyvTl~td~~Yl~ga~vL~~SL~~~~s~---~~lvvLvt~~vs~~-~~~~L~~~~~~----vi~V~~--l~~~~~~~~-~ 74 (263)
T 3u2u_A 6 AFVTLTTNDAYAKGALVLGSSLKQHRTT---RRLVVLATPQVSDS-MRKVLETVFDE----VIMVDV--LDSGDSAHL-T 74 (263)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTTCC---SEEEEEECTTSCHH-HHHHHHHHSSE----EEECCC--CCCCCHHHH-H
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHhCCC---CCEEEEecCCCCHH-HHHHHHHcCCe----EEEeee--cCCcchhhh-h
Confidence 3466788999999999999999999874 355554 5667753 45566655532 333321 111000000 0
Q ss_pred hhc---CcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCC
Q 042515 136 ALD---QPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 136 ~~~---~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
.+. ...+|.|+.++++.+ ++||||||+|++|++||++||+++ .+||+.|. .|
T Consensus 75 ~~~rp~~~~~~~kl~~~~l~~--~~~vlylD~D~~v~~~~~~Lf~~~----~~aA~~d~-----------~~-------- 129 (263)
T 3u2u_A 75 LMKRPELGVTLTKLHCWSLTQ--YSKCVFMDADTLVLANIDDLFDRE----ELSAAPDP-----------GW-------- 129 (263)
T ss_dssp HTTCTTGGGGGGGGGGGGCTT--CSEEEEECTTEEECSCCGGGGGSC----SSEEEECT-----------TS--------
T ss_pred hhcCcchhHHhHHHHhccccC--cceEEEEcCCEeeccCHHHHhCCC----cceEeccC-----------CC--------
Confidence 001 125899999999875 899999999999999999999987 35555431 11
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcC-----ceEecCccccccCCCCCc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAG-----DVEGVEHRWNQHGLGGDN 287 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~-----~i~~L~~~wN~~~~~~~~ 287 (342)
+.||||||||||++. +..+++++++.... .+.++||++||.+|.+ +++.||.+||++......
T Consensus 130 -----~~~fNsGv~li~p~~----~~~~~l~~~~~~~~---~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~ 197 (263)
T 3u2u_A 130 -----PDCFNSGVFVYQPSV----ETYNQLLHLASEQG---SFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYS 197 (263)
T ss_dssp -----TTSEEEEEEEECCCH----HHHHHHHHHHHHHC---CTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHS
T ss_pred -----CccccCeEEEEcccH----HHHHHHHHHHHhcC---CCCcccHHHHHHHhccccccCeeEeCCcccccccchhcc
Confidence 259999999999864 56677877776422 3467999999999988 789999999997421100
Q ss_pred cccccccCCCCCcEEEeccCCCCCCccC
Q 042515 288 LEGLCRNLHPGPVSLLHWSGKGKPWLRI 315 (342)
Q Consensus 288 ~~~~~~~~~~~~~~IiHy~g~~KPW~~~ 315 (342)
........ ..+++||||+|+.|||+..
T Consensus 198 ~~~~~~~~-~~~~~IIHf~g~~KPW~~~ 224 (263)
T 3u2u_A 198 YLPAFKVF-GASAKVVHFLGRVKPWNYT 224 (263)
T ss_dssp SHHHHHHH-GGGCSEEECCSSSCGGGSE
T ss_pred ccHHHHhh-cCCeEEEEECCCCcCCCCC
Confidence 01110011 2467999999999999875
No 5
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=75.21 E-value=8.7 Score=36.78 Aligned_cols=132 Identities=14% Similarity=0.164 Sum_probs=66.3
Q ss_pred CCCCcccCCCCCCCCCCCCcccccccCCCCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHH
Q 042515 22 GELPRFREAPAFRNGRECPKATWSALDRRSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLE 101 (342)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~ 101 (342)
..+|.-|.-|..|.. .|....-. -+...+-|++.+=..-...+..+|.||+..+..+..+.+.|+.++.+.+.
T Consensus 3 ~~~~~~r~~~d~r~~-~c~~~~~~------~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~ 75 (472)
T 1xhb_A 3 EMIALNRSLPDVRLE-GCKTKVYP------DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDF 75 (472)
T ss_dssp -----CCCCCCCSCG-GGGTCCCC------SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGG
T ss_pred ccccCCCCCCCCCCh-hhccCcCC------cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHH
Confidence 345566777766543 57433211 12245777777643333566778999999765322256666555433211
Q ss_pred HH---HHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 102 LS---RTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 102 l~---~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
.. +.+.+.+|. +++++..... .+ ...+|....+... -+-|++||+|+++..+ |.+|.+
T Consensus 76 t~~~l~~~~~~~~~-~v~vi~~~~n--~G-------------~~~a~N~g~~~A~--gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 76 LKRPLESYVKKLKV-PVHVIRMEQR--SG-------------LIRARLKGAAVSR--GQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp GTHHHHHHHHSSSS-CEEEEECSSC--CC-------------HHHHHHHHHHHCC--SSEEEEEESSEEECTTCHHHHHH
T ss_pred HHHHHHHHHHHCCC-cEEEEECCCC--CC-------------hHHHHHHHHHhcc--CCeEEEECCCeEeCccHHHHHHH
Confidence 22 222234552 2455443211 11 1223443333332 4789999999998664 556655
Q ss_pred c
Q 042515 178 I 178 (342)
Q Consensus 178 ~ 178 (342)
.
T Consensus 138 ~ 138 (472)
T 1xhb_A 138 R 138 (472)
T ss_dssp H
T ss_pred H
Confidence 3
No 6
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=68.03 E-value=19 Score=34.84 Aligned_cols=129 Identities=16% Similarity=0.193 Sum_probs=68.9
Q ss_pred CCCcccCCCCCCCCCCCCcccccccCCCCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHH
Q 042515 23 ELPRFREAPAFRNGRECPKATWSALDRRSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLEL 102 (342)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l 102 (342)
.++.-|+-|..|.. .|...... -+...+.|++.+=..-...+.-+|.||+..+..+..+.+.|+-++.+.+.+
T Consensus 41 ~i~~~r~~~d~r~~-~~~~~~~~------~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~ 113 (501)
T 2ffu_A 41 KLRMDRAIPDTRHD-QCQRKQWR------VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPED 113 (501)
T ss_dssp HSCTTCCCCCCSCG-GGGGCCCC------SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHH
T ss_pred ccCCCCcCCCCChh-HhccccCC------cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHH
Confidence 35566777766543 56332111 122357777776322222567789999988753222566666555433333
Q ss_pred HHHHHhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 103 SRTITATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 103 ~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
...+ +.++. ++++..... . + ...+|....+... -+-|++||+|+++..+ |.+|.+.
T Consensus 114 ~~~~-~~~~~--v~vi~~~~n-----~--G--------~~~A~N~G~~~A~--gd~i~flD~D~~~~p~~L~~ll~~ 170 (501)
T 2ffu_A 114 GALL-GKIEK--VRVLRNDRR-----E--G--------LMRSRVRGADAAQ--AKVLTFLDSHCECNEHWLEPLLER 170 (501)
T ss_dssp HHGG-GGBTT--EEEEECSSC-----C--H--------HHHHHHHHHHHCC--SSEEEECCSSEEECTTCHHHHHHH
T ss_pred HHHH-hcCCC--EEEEECCCC-----c--C--------HHHHHHHHHHhcC--CCEEEEECCCcccCccHHHHHHHH
Confidence 3333 34554 455433211 0 1 1234444444443 4789999999998654 5566543
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=67.72 E-value=13 Score=36.96 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=69.2
Q ss_pred CCCcccCCCCCCCCCCCCcccccccCCCCCCCCcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHH
Q 042515 23 ELPRFREAPAFRNGRECPKATWSALDRRSHNPSIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLEL 102 (342)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l 102 (342)
.++..|..|..|. ..|...... -+...+-|++.+=..-+..+..+|.||+..+..+..+.+.|+.++.+...+
T Consensus 87 ~i~l~R~~~d~r~-~~~~~~~~~------~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl 159 (570)
T 2d7i_A 87 KISLNRSLPDIRH-PNCNSKRYL------ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL 159 (570)
T ss_dssp TSCTTCCCCCCSC-GGGGTCCEE------SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG
T ss_pred ccCCCccCCCCCC-ccceecccC------CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH
Confidence 3556677776543 356332111 112467787776433356778899999998753222466666555432221
Q ss_pred HHHH---HhhCCCccEEEEEecCccccCccchhhhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHcc
Q 042515 103 SRTI---TATFPYLNFEIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWSI 178 (342)
Q Consensus 103 ~~~l---~~~~p~~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~~ 178 (342)
.+.+ .+.++. ++++..+.. .+ ...+|....+... -+-|++||+|+++..+ |..|.+.
T Consensus 160 ~~~l~~~~~~~~~--v~vi~~~~n--~G-------------~~~A~N~G~~~A~--gd~i~fLD~D~~~~p~~L~~ll~~ 220 (570)
T 2d7i_A 160 KKPLEDYMALFPS--VRILRTKKR--EG-------------LIRTRMLGASVAT--GDVITFLDSHCEANVNWLPPLLDR 220 (570)
T ss_dssp THHHHHHHTTSTT--EEEEECSSC--CC-------------HHHHHHHHHHHCC--SSEEEECCSSEEECTTCSHHHHHH
T ss_pred HHHHHHHHHhCCe--EEEEECCCC--CC-------------HHHHHHHHHHhcC--CCEEEEEcCCccccccHHHHHHHH
Confidence 2222 234553 455443211 11 1233444333333 4789999999999654 5555543
No 8
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=52.38 E-value=1e+02 Score=25.80 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=56.5
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCc-cchhhh
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGK-ISYSIR 134 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~-i~~~~~ 134 (342)
.|-|++.+= |-...+.-+|.||+..+. .++.+.|+.++.+. ...+.+++.-...+++++..+....... -..+
T Consensus 2 ~vSViIp~y-n~~~~l~~~l~Sl~~q~~--~~~eiivvDd~S~d-~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G-- 75 (255)
T 1qg8_A 2 KVSVIMTSY-NKSDYVAKSISSILSQTF--SDFELFIMDDNSNE-ETLNVIRPFLNDNRVRFYQSDISGVKERTEKTR-- 75 (255)
T ss_dssp CEEEEEEES-SCTTTHHHHHHHHHTCSC--CCEEEEEEECSCCH-HHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCH--
T ss_pred eEEEEEEcC-CCHHHHHHHHHHHHhccC--CceEEEEEECCCCc-hHHHHHHHHhhcCCEEEEecccccccccccccC--
Confidence 355666653 223666779999998664 35777776666543 3333443221122455554321000000 0001
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
...+|...-+... -+-|++||+|.++..| |..+.+
T Consensus 76 ------~~~a~N~gi~~a~--g~~i~~lD~Dd~~~~~~l~~~~~ 111 (255)
T 1qg8_A 76 ------YAALINQAIEMAE--GEYITYATDDNIYMPDRLLKMVR 111 (255)
T ss_dssp ------HHHHHHHHHHHCC--CSEEEEEETTEEECTTHHHHHHH
T ss_pred ------HHHHHHHHHHHcC--CCEEEEeCCCCccChHHHHHHHH
Confidence 1234444444443 5889999999999765 555544
No 9
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=49.49 E-value=1.5e+02 Score=26.73 Aligned_cols=205 Identities=14% Similarity=0.143 Sum_probs=109.6
Q ss_pred CcceEEEEeCcchh-hchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccch-h
Q 042515 55 SIIHISMTLDSTYL-RGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISY-S 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl-~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~-~ 132 (342)
-+|-|++.+=+.|. ....-.+.|.=+|=-..-+++++|++|+.+. +- .+ ...|.-++++..+..+ .+++. +
T Consensus 48 ~tIGl~vfa~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~--~p-~v-~l~~~r~~~V~~i~~~---~~W~d~s 120 (289)
T 1o7q_A 48 ITVGLTVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSR--MP-LI-ELGPLRSFKVFKIKPE---KRWQDIS 120 (289)
T ss_dssp CCEEEEEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGG--CC-CC-CCCTTEEEEEEECCCC---SSHHHHH
T ss_pred CeEEEEEEEecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhh--CC-cc-ccCCCCeEEEEEeccc---cCCchhH
Confidence 35667777777898 8888888888887544467899999987431 00 00 0112223555554432 12221 1
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeeccc--ccCcccccCccCCCCcccc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYC--HANFTNYFTSKFWSNPVFS 210 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~--~~~~~~~~~~~~w~~~~~~ 210 (342)
+++ . .++.+.-..+++. ++|-+..+|+|+++.+++..= .| |..+|+...- ..+ ..-|+.. ++| .+
T Consensus 121 m~R-m---~~i~~~~~~~~~~-evDYLf~~dvd~~F~~~vG~E---~L-g~lv~~lHp~~y~~~-~~~fpYE--Rrp-~S 187 (289)
T 1o7q_A 121 MMR-M---KTIGEHIVAHIQH-EVDFLFCMDVDQVFQDKFGVE---TL-GESVAQLQAWWYKAD-PNDFTYE--RRK-ES 187 (289)
T ss_dssp HHH-H---HHHHHHHHHTHHH-HCSEEEEECSSEEECSCBCGG---GC-SSEEEEECTTTTTSC-GGGSCCC--CCT-TS
T ss_pred HHH-H---HHHHHHHHHHHhh-cCCEEEEeeCCcEeeccCCHH---HH-HHHHHccCHHHhCCC-CCCCCCC--CCc-Cc
Confidence 111 0 1122222345565 599999999999999987541 22 4566653211 111 0111110 111 11
Q ss_pred CCC--CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccccc-ccCCCcchhhhhh--cCceEecCcccccc
Q 042515 211 GTV--KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRI-YELGSLPPFLLVF--AGDVEGVEHRWNQH 281 (342)
Q Consensus 211 ~~~--~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~-~~~~DQd~lN~vf--~~~i~~L~~~wN~~ 281 (342)
..+ .+.+..|+-+|+.-=-....- ++++.|.+-|..-+.+.+ -...|.--||-.| ....+.|++.|+..
T Consensus 188 ~AyIp~~eGdfYY~Ga~fGGt~~~vl--~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~KPtKvLSPEY~wd 261 (289)
T 1o7q_A 188 AAYIPFGEGDFYYHAAIFGGTPTQVL--NITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNKPTKILSPEYCWD 261 (289)
T ss_dssp TTCCCTTCCSCCEEEEEEEECHHHHH--HHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSCCSEEECGGGSBC
T ss_pred eeeecCCCCCEEEEceeeCCcHHHHH--HHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcCCCEEECHHHCCC
Confidence 222 245678888887754333332 245555544443222222 1235777899763 45578899999875
No 10
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=46.40 E-value=22 Score=30.32 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=16.5
Q ss_pred hcccccCcEEEEecceEEec
Q 042515 151 LLPLTVGRIIYFDSDLIVVD 170 (342)
Q Consensus 151 llp~~vdRvIYLDsDiiV~~ 170 (342)
-.| +.+-+-|||+|++|.+
T Consensus 69 khP-eAEWfWWLDsDAlIMD 87 (213)
T 2p6w_A 69 KFP-STEWFLWLDSDVYVNP 87 (213)
T ss_dssp HCT-TCSEEEEECTTEEECG
T ss_pred HCC-CceEEEEecCCceeec
Confidence 367 5999999999999984
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=37.06 E-value=1.4e+02 Score=30.82 Aligned_cols=43 Identities=2% Similarity=-0.186 Sum_probs=26.6
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCc
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQR 97 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~ 97 (342)
..+.|++.+=..-..-+..++.|+++.+-.++.+.+.|+.|+.
T Consensus 140 P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgS 182 (802)
T 4hg6_A 140 PTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGG 182 (802)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTC
T ss_pred CcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCC
Confidence 4677777763222222356899998765433457888777764
No 12
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=32.02 E-value=1.5e+02 Score=26.03 Aligned_cols=203 Identities=11% Similarity=0.066 Sum_probs=100.4
Q ss_pred cceEEEEeCcchhhchHHHHHHHHHhcCCCCC--EEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccch-h
Q 042515 56 IIHISMTLDSTYLRGSVAGVFSVLQHATCPEN--IVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISY-S 132 (342)
Q Consensus 56 ~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~--i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~-~ 132 (342)
+|-|++.+-+.|...+.-.+.|.=+|=-...+ +.++|++|..+. +- .-+.-.+.+.. . + ...+.. +
T Consensus 2 tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~--vp-----~~~~~~v~~~~-~-~--~~~Wqd~s 70 (246)
T 4ayl_A 2 RIGILYICTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKL--YD-----EENNKHIHRIK-Q-K--NLGWPDNT 70 (246)
T ss_dssp EEEEEEECCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCC--TT-----TTTCTTEEEEE-C-C--CCCTTHHH
T ss_pred eEEEEEEEeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhh--CC-----cCCCceEEEEe-C-C--cCCCcccc
Confidence 35667777789998999999999988765678 999999997542 10 00111232221 1 1 111221 1
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccC-CCeEEeecc--cccCcccccCccCCCCccc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLR-GRVLGAPEY--CHANFTNYFTSKFWSNPVF 209 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~-~~~iaA~~d--~~~~~~~~~~~~~w~~~~~ 209 (342)
+++ . .++.+. ...+.. ++|-+..+|+|+++.+++..=-=++.+ |..+|.... ...+- .-|+.. ++| .
T Consensus 71 m~R-m---~~i~~~-~~~~~~-evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y~~~~-~~fpYE--Rrp-~ 140 (246)
T 4ayl_A 71 LKR-F---HIFLRI-KEQLER-ETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFYNKPN-SEFTYE--RRD-A 140 (246)
T ss_dssp HTH-H---HHHHTT-HHHHHH-HCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC------------------
T ss_pred hHH-H---HHHHHH-HHHHHh-hCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhhCCCc-ccCccc--CCc-c
Confidence 211 0 122232 444444 599999999999999988641102222 445655321 00000 001100 111 1
Q ss_pred cCCC--CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccccc-ccCCCcchhhhhhc-Cc-eEecCcccccc
Q 042515 210 SGTV--KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRI-YELGSLPPFLLVFA-GD-VEGVEHRWNQH 281 (342)
Q Consensus 210 ~~~~--~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~-~~~~DQd~lN~vf~-~~-i~~L~~~wN~~ 281 (342)
+..+ .+.+.-|+-+||.==-..... ++++.|..-+..-+.+.+ --..|.--||-.|- .+ -+.|++.|+..
T Consensus 141 S~AyIp~~eGdfYY~ga~fGG~~~~vl--~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~KP~~vLSPEY~wd 215 (246)
T 4ayl_A 141 STAYIPEGEGRYYYAGGLSGGCTKAYL--KLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNPPAITLSPAYLYP 215 (246)
T ss_dssp ----------CCCBCSSEEEEEHHHHH--HHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSCCSEEECGGGGEE
T ss_pred ccccccCCCCCeEEeeeecCCcHHHHH--HHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCCCCeeeCHHHcCC
Confidence 1112 134566777776643333322 245555554443222222 12357778997643 33 34599999875
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=30.22 E-value=3.2e+02 Score=24.98 Aligned_cols=110 Identities=15% Similarity=0.168 Sum_probs=54.3
Q ss_pred ceEE-EEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCc-cchhhh
Q 042515 57 IHIS-MTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGK-ISYSIR 134 (342)
Q Consensus 57 i~I~-~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~-i~~~~~ 134 (342)
+.|+ ++++.. . +.-++.||++..+..+...+ |++++-+.++.++.++ .+.. .+....... +... ....
T Consensus 4 ~pViI~~yNRp--~-l~~~L~sL~~~~p~~~~~~i-ivsdDgs~~~~~~vi~-~~~~-~I~~~~~~d--~~~~~~~~~-- 73 (343)
T 1fo8_A 4 IPILVIACDRS--T-VRRCLDKLLHYRPSAELFPI-IVSQDCGHEETAQVIA-SYGS-AVTHIRQPD--LSNIAVQPD-- 73 (343)
T ss_dssp CCEEEEESSCT--T-HHHHHHHHHHHCSCTTTSCE-EEEECTTCHHHHHHHH-TTGG-GSEEEECSC--CCCCCCCTT--
T ss_pred ccEEEEECCcH--H-HHHHHHHHHhcCCCcCCcEE-EEEECCCCHHHHHHHH-HcCC-ceEEEEcCC--ccccccchh--
Confidence 3444 455544 3 78899999998743233334 3444434445565554 3321 233221111 1110 0110
Q ss_pred hhhcCcchhHHH------hhhhhcc-cccCcEEEEecceEEecchHHHHcc
Q 042515 135 QALDQPLNYARI------YLADLLP-LTVGRIIYFDSDLIVVDDVAKLWSI 178 (342)
Q Consensus 135 ~~~~~~~~y~Rl------~l~~llp-~~vdRvIYLDsDiiV~~Di~~L~~~ 178 (342)
+. ...+|+|+ -+..++. ...++||.||.|+++--|.=+.++.
T Consensus 74 -N~-g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~ 122 (343)
T 1fo8_A 74 -HR-KFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQA 122 (343)
T ss_dssp -CG-GGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHH
T ss_pred -hc-CcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHH
Confidence 00 00123322 2333332 0279999999999999987665543
No 14
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=30.05 E-value=3.2e+02 Score=26.63 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=56.0
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccchhhh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
..+.|++.+=.. ...+..++.|++..... ..+.+.|+.++.+. ...+.+++.-....+++...... + ..
T Consensus 93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~-~~~eiivvDd~s~d-~t~~~~~~~~~~~~i~~i~~~~~---~-~g---- 161 (625)
T 2z86_A 93 DGLSIVIPTYNR-AKILAITLACLCNQKTI-YDYEVIVADDGSKE-NIEEIVREFESLLNIKYVRQKDY---G-YQ---- 161 (625)
T ss_dssp CCEEEEEEESSC-HHHHHHHHHHHHTCCCS-SCEEEEEEEESCSS-CHHHHHHTTTTTSCEEEEEECCC---S-CC----
T ss_pred CcEEEEEecCCc-HHHHHHHHHHHHhhccC-CCeEEEEEeCCCch-hHHHHHHHhhhcCCeEEEEeCCC---C-cc----
Confidence 357777766322 45677899999987542 36788777766432 23334433211223444432110 0 00
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
...+|...-+... -+-|+++|+|.++..+ |..+.+
T Consensus 162 ------~~~a~N~g~~~a~--g~~v~~lD~D~~~~~~~l~~~~~ 197 (625)
T 2z86_A 162 ------LCAVRNLGLRAAK--YNYVAILDCDMAPNPLWVQSYME 197 (625)
T ss_dssp ------HHHHHHHHHHHCC--SSEEEEECTTEEECTTHHHHHHH
T ss_pred ------hhHHHHHHHHhCC--cCEEEEECCCCCCCHHHHHHHHH
Confidence 1123333333333 5899999999999765 444444
No 15
>1ym0_B Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=28.57 E-value=31 Score=18.82 Aligned_cols=14 Identities=29% Similarity=0.693 Sum_probs=12.1
Q ss_pred CCCCCCCCCCCCcc
Q 042515 29 EAPAFRNGRECPKA 42 (342)
Q Consensus 29 ~~~~~~~~~~~~~~ 42 (342)
|+|.++-|..|+.+
T Consensus 1 eppvwypggqcgvs 14 (27)
T 1ym0_B 1 EPPVWYPGGQCGVS 14 (27)
T ss_dssp CCCCSCTTSCCSCC
T ss_pred CCceeccCCcccce
Confidence 68999999999765
No 16
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=28.15 E-value=3.3e+02 Score=24.52 Aligned_cols=203 Identities=12% Similarity=0.103 Sum_probs=106.3
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCCCccEEEEEecCccccCccch-hh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVKGKISY-SI 133 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~-~~ 133 (342)
-+|-+++.+-+.|+..+.-.+.|.=+|=-...+++++|++|..+. +- .+ ..-|.-++++..+... .++.. ++
T Consensus 58 ~tIGl~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~~--vP-~v-~l~~~r~~~V~~v~~~---~~Wqd~sm 130 (298)
T 3ioh_A 58 TTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAA--VP-RV-TLGTGRQLSVLEVRAY---KRWQDVSM 130 (298)
T ss_dssp CEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGG--SC-CC-CCCTTEEEEEEECCCC---SSHHHHHH
T ss_pred CcEEEEEEEeCcHHHHHHHHHHhHHHhccCCceEEEEEEeCChhh--CC-cc-ccCCCCeEEEEEeccc---cCCccccH
Confidence 356677777889999999999999888755577999999997431 10 00 0122334555544321 12221 11
Q ss_pred hhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecc--cccCcccccCccCCCCccccC
Q 042515 134 RQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEY--CHANFTNYFTSKFWSNPVFSG 211 (342)
Q Consensus 134 ~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d--~~~~~~~~~~~~~w~~~~~~~ 211 (342)
++ . .++..+-...++. ++|-+..+|+|+++.+++..= .| |..+|.... ...+ ..-|+.. ++| .+.
T Consensus 131 ~R-m---~~i~~~~~~~~~~-EvDyLfc~dvd~~F~~~vG~E---~L-g~lva~lHp~~y~~~-~~~FpYE--Rrp-~S~ 197 (298)
T 3ioh_A 131 RR-M---EMISDFCERRFLS-EVDYLVCVDVDMEFRDHVGVE---IL-TPLFGTLHPGFYGSS-REAFTYE--RRP-QSQ 197 (298)
T ss_dssp HH-H---HHHHHHHHHTHHH-HCSEEEEEESSEEECSCBCGG---GC-SSEEEEBCTTTTTSC-GGGSCCC--CCT-TST
T ss_pred HH-H---HHHHHHHHHHHhh-cCCEEEEecCCCeeccCccHH---Hh-HhhHhhcChhhhcCC-cccCccc--CCc-ccc
Confidence 11 0 1122222333555 599999999999999986531 11 334554321 0100 0011100 111 111
Q ss_pred CC--CCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcc---cccccCCCcchhhhhh--cCceEecCcccccc
Q 042515 212 TV--KGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKK---YRIYELGSLPPFLLVF--AGDVEGVEHRWNQH 281 (342)
Q Consensus 212 ~~--~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~---~~~~~~~DQd~lN~vf--~~~i~~L~~~wN~~ 281 (342)
.+ .+.+..|+-+|+.==-..... ++++.|..-+..-+. ...| .|.--||-.| +...+.|++.|+..
T Consensus 198 AyIp~~eGdfYY~ga~fGGt~~~vl--~Lt~~C~~~i~~D~~n~IeA~W--hDESHLNKYfl~hKPtKvLSPEY~Wd 270 (298)
T 3ioh_A 198 AYIPKDEGDFYYGGAFFGGSVQEVQ--RLTRACHQAMMVDQANGIEAVW--HDESHLNKYLLRHKPTKVLSPEYLWD 270 (298)
T ss_dssp TCCCTTCCSCCBCTTEEEEEHHHHH--HHHHHHHHHHHHHHHTTCCCTT--THHHHHHHHHHHSCCSEEECGGGSBC
T ss_pred ccccCCCCCeEEeeeecCCcHHHHH--HHHHHHHHHHHHHHhCCceEec--cchhhhhhhhhhcCCCceeCHHHcCC
Confidence 22 144567777776643222222 244444444432222 2334 5777899664 34579999999864
No 17
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=26.25 E-value=2.7e+02 Score=22.76 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=55.6
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHH--HHHHHHHhhCCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRL--ELSRTITATFPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~--~l~~~l~~~~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
..|-|++.+= |-...+.-+|.||+..+. .++.+.|+.++.+.. ++.+.+.+.+|+ +++.. . +. .+ .
T Consensus 5 p~vsViIp~y-n~~~~l~~~l~Sl~~q~~--~~~eiIvvDd~S~d~t~~~~~~~~~~~~~--i~~i~-~-~n-~G-~--- 72 (240)
T 3bcv_A 5 PKVSVIVPIY-NVEKYLDQCVQALLAQTL--SDIEIILIDDESPDNCPKICDDYAAQYPN--IKVIH-K-KN-AG-L--- 72 (240)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHTCSS--SSEEEEEEECCCSSSHHHHHHHHHHHCSS--EEEEE-C-CC-CC-H---
T ss_pred CcEEEEEecC-CCHHHHHHHHHHHHhCcC--CCeEEEEEECCCCcCHHHHHHHHHhhCCC--EEEEE-C-CC-CC-h---
Confidence 3577777763 223566789999998664 357777776654321 222333345664 34442 1 10 11 1
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecc-hHHHHc
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDD-VAKLWS 177 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~D-i~~L~~ 177 (342)
..+|-..-+... -+-|++||+|.++..+ |..|.+
T Consensus 73 ---------~~a~N~g~~~a~--g~~i~~lD~Dd~~~~~~l~~l~~ 107 (240)
T 3bcv_A 73 ---------GMACNSGLDVAT--GEYVAFCDSDDYVDSDMYMTMYN 107 (240)
T ss_dssp ---------HHHHHHHHHHCC--SSEEEECCTTCCCCTTHHHHHHH
T ss_pred ---------HHHHHHHHHHcC--CCEEEEECCCCcCCHHHHHHHHH
Confidence 223443333333 4889999999998665 444544
Done!