BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042521
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 43 EMPVTAPGTGGSLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGR-------DFIEI 95
++P SLY+VL V AT +IK+AYR LA++ HPD++G R +F++I
Sbjct: 54 QIPRRLTTVPASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKI 113
Query: 96 HNAYETLSDPTARAVYDMSLVGRRRTTRTASFGCSGGSGFHPTRRWETDQCW 147
H AY TLSDP R+VYD ++ R +R + G SG G + R WETDQCW
Sbjct: 114 HAAYCTLSDPEKRSVYDRRMLRR---SRPLTVGTSGL-GSYVGRNWETDQCW 161
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD-FIEIHNAYETLSDPTARAVYD 112
+LY++L + TAT+ EIKTAY+ LAK YHPD++ G D F++I+NAY LSD T +A YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 113 MSL 115
L
Sbjct: 62 AML 64
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=dnaJ PE=3
SV=1
Length = 384
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD----FIEIHNAYETLSDPTARA 109
LYE+L V+ A+ EIK AYR LAK YHPDL+ ++ F EI+ AYE LSDP RA
Sbjct: 5 DLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRA 64
Query: 110 VYDM 113
YD
Sbjct: 65 QYDQ 68
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNG-RDFIEIHNAYETLSDPTARAVYD 112
+LY++L + TA+I EIK AY+ LAK YHPD++ G + F+EI+NAY LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 113 MSLVGRRRTTRTASFGCS 130
L R + S
Sbjct: 62 SMLKVNDFQNRIKNLDIS 79
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +A+ EIK AYR L+K YHPD+ +G F EI AYE LSDP RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psi1 PE=2 SV=2
Length = 379
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 55 LYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNG-RDFIEIHNAYETLSDPTARAVYDM 113
LY+ L V P A+ +E+K AYR LA YHPD + NG + F EI AYE LSDP R +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYDQ 66
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ PE=2
SV=1
Length = 370
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAV 110
YE+L V +AT +EIK AYR LAK YHPD++ G F E+ AYE LSD RA
Sbjct: 6 DFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRAN 65
Query: 111 YDM 113
YD
Sbjct: 66 YDQ 68
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ +G+ F E+ AYETLSD R+ YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGR------DFIEIHNAYETLSDPTA 107
S Y++L V + T+ EIK AY+ LA+ YHPD+S R FI + AYETLSDP
Sbjct: 66 SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125
Query: 108 RAVYDMSL 115
R +YD L
Sbjct: 126 RVLYDRDL 133
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ +G+ F E+ AYETLSD RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1
Length = 412
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
LY++L V P A+ +E+K AYR LAK YHPD + N G F EI AYE LS+P R +YD
Sbjct: 8 KLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGR----DFIEIHNAYETLSDPTARAVY 111
YE+L V+ A+ +EIK AYR LAK YHPD++ + F EI+ AYE LSDP RA Y
Sbjct: 8 YEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARY 67
Query: 112 DM 113
D
Sbjct: 68 DQ 69
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
LY++L V P A+ +E+K AYR LAK YHPD + N G F EI AYE LS+P R +YD
Sbjct: 8 KLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
LY++L V P A+ +E+K AYR LAK YHPD + N G F EI AYE LS+P R +YD
Sbjct: 8 KLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
LY++L V P A+ +E+K AYR LAK YHPD + N G F EI AYE LS+P R +YD
Sbjct: 8 KLYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain FZB42)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ SG F E+ AYE LSD RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAV 110
YE+L V +A E+K AYR LA+ YHPD++ G F EI+ AYE LSDP ARA
Sbjct: 4 DFYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARAN 63
Query: 111 YD 112
YD
Sbjct: 64 YD 65
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD+ +G F E+ AYETLSD RA YD
Sbjct: 7 YEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDL-SGNGR---DFIEIHNAYETLSDPTARA 109
+LYE+L V AT EIK +YR LAK YHPD+ SG+ F EI+ AYE L D R
Sbjct: 3 NLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKRK 62
Query: 110 VYDM 113
YDM
Sbjct: 63 KYDM 66
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
LYEVL V+ TA+ +E+K AYR LA YHPD + N G F EI AYE L+D RA YD
Sbjct: 6 KLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYD 65
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAV 110
LY+VL VE A+ EIK AYR L+K YHPDL+ G F ++ AYETL D RA
Sbjct: 5 DLYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRAQ 64
Query: 111 YDM 113
YD
Sbjct: 65 YDQ 67
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC 3956
/ LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAV 110
LY+VL V+ A+ +EIK AYR LA YHPD++ G + F +I+ AYETLSD RA
Sbjct: 5 DLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQ 64
Query: 111 YDM 113
YD
Sbjct: 65 YDQ 67
>sp|Q892R1|DNAJ_CLOTE Chaperone protein DnaJ OS=Clostridium tetani (strain Massachusetts
/ E88) GN=dnaJ PE=3 SV=1
Length = 375
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD----FIEIHNAYETLSDPTARA 109
YEVL VE A +EIK A+R LA YHPD + ++ F EI+ AY+ LSDP RA
Sbjct: 5 DFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRA 64
Query: 110 VYDMSLVGRRRTTRTASFGCSGGSGF 135
YD TA F GG+GF
Sbjct: 65 QYDQ--------FGTADFN-GGGAGF 81
>sp|A7GT07|DNAJ_BACCN Chaperone protein DnaJ OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=dnaJ PE=3 SV=1
Length = 366
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNG---RDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR LAK YHPD+S F E+ AYE LSD RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDL---SGNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +A+ EIK AYR L+K YHPD+ +G F EI AYE LSD RA YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 TGGSLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN---GRDFIEIHNAYETLSDPTA 107
T YE+L V AT EIK AYR L + YHPDL+ + F EI+ AYE LSDP
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62
Query: 108 RAVYDM 113
RA YD
Sbjct: 63 RAQYDQ 68
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD++ G F EI AYE LSD RA YD
Sbjct: 7 YEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|P73097|DNAJ2_SYNY3 Chaperone protein DnaJ 2 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=dnaJ2 PE=3 SV=1
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGR----DFIEIHNAYETLSDPTARAVY 111
Y++L V AT EIK ++R LA+ YHPD++ N + F +I+ AY+ LSD T R
Sbjct: 8 YQILGVPRNATAEEIKKSFRKLARQYHPDVNPNDKTAEEKFKDINEAYDVLSDETKRREL 67
Query: 112 DMSLVGRRRTTRTASFGCSGGSGFHP 137
D L GR R T+ F + G P
Sbjct: 68 DSRLFGRFRRPPTSRFSPNSNGGRSP 93
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN----GRDFIEIHNAYETLSDPTARAVY 111
YE+L V AT EIK AYR LA+ YHPD++ + F EI+ AYE LSDP RA Y
Sbjct: 6 YEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARY 65
Query: 112 DM 113
D
Sbjct: 66 DQ 67
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS-GNGRDFIEIHNAYETLSDPTARAVYD 112
Y++L V+P+A+ EIK AYR LA YHPD + G F I AYE LSDP R VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD----FIEIHNAYETLSDPTARA 109
YEVL + TA EIK AY+ LA YHPD + +D F EI AYE LSDP RA
Sbjct: 5 DFYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRA 64
Query: 110 VYDM 113
YD
Sbjct: 65 AYDQ 68
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1
SV=2
Length = 397
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
+ Y+VL V+P AT E+K AYR LA YHPD + N G F +I AYE LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 51 TGGSLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD----FIEIHNAYETLSDPT 106
T YE+L V A EIK AYR LA+ YHPD++ + D F EI AYE LSDP
Sbjct: 3 TSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPD 62
Query: 107 ARAVYDM 113
RA YD
Sbjct: 63 KRARYDQ 69
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2
SV=1
Length = 396
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
+ Y+VL V+P AT E+K AYR LA YHPD + N G F +I AYE LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops GN=DNAJA1
PE=2 SV=1
Length = 397
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
+ Y+VL V+P AT E+K AYR LA YHPD + N G F +I AYE LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS-GNGRDFIEIHNAYETLSDPTARAVYD 112
Y++L V+P+A+ EIK AYR LA YHPD + G F I AYE LSDP R +YD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 65
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2
Length = 397
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 54 SLYEVLRVEPTATISEIKTAYRSLAKVYHPDLSGN-GRDFIEIHNAYETLSDPTARAVYD 112
+ Y+VL V+P AT E+K AYR LA YHPD + N G F +I AYE LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL V +A+ EIK AYR L+K YHPD++ G F EI AYE LSD RA YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16) GN=dnaJ
PE=3 SV=1
Length = 372
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGR---DFIEIHNAYETLSDPTARAVYD 112
YEVL V+ A++ E+K AYR LA+ YHPD++ F E+ AY+TLSDP +A YD
Sbjct: 7 YEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain ATCC
BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD----FIEIHNAYETLSDPTARAVY 111
YE+L V AT EIK AYR LAK YHPD + ++ F EI+ AYE LSDP R +Y
Sbjct: 8 YEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLY 67
Query: 112 DM 113
D
Sbjct: 68 DQ 69
>sp|P35514|DNAJ_LACLA Chaperone protein DnaJ OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=dnaJ PE=3 SV=2
Length = 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAVYD 112
YE L V+ A+ EIK AYR ++K YHPDL+ G + E+ AYETLSD RA YD
Sbjct: 7 YERLGVDKNASQDEIKKAYRKMSKKYHPDLNKEEGAEEKYKEVQEAYETLSDEQKRAAYD 66
Query: 113 M 113
Sbjct: 67 Q 67
>sp|Q87VN8|CBPA_PSESM Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=cbpA PE=3 SV=1
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAVYD 112
Y++L VEP A IKTAYR LA+ YHPD+S G F E AYE LS P RA YD
Sbjct: 7 YKILDVEPAADDKAIKTAYRKLARKYHPDVSKEAGAEDKFKEASEAYEVLSSPEKRAEYD 66
Query: 113 -MSLVGRR-RTTRT----ASFGCSGGSGFHPT 138
+ GR+ R +T S +G GF T
Sbjct: 67 ELRKYGRQGRPFQTPPGWQSRAGAGAGGFEET 98
>sp|Q6RSN5|DNAJ_RHIRD Chaperone protein DnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1
Length = 379
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 55 LYEVLRVEPTATISEIKTAYRSLAKVYHPDL----SGNGRDFIEIHNAYETLSDPTARAV 110
YE L V TA E+K+A+R LA YHPD + + R F EI+ AYETL DP RA
Sbjct: 6 FYETLGVSKTADEKELKSAFRKLAMKYHPDKNPDDADSERKFKEINEAYETLKDPQKRAA 65
Query: 111 YD 112
YD
Sbjct: 66 YD 67
>sp|Q9HJ83|DNAJ_THEAC Chaperone protein DnaJ OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=dnaJ PE=3 SV=1
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 14/86 (16%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLSGNGRD-----FIEIHNAYETLSDPTARAV 110
Y++L V+ AT EIK A+R LAK +HPDL + F EI AYE LSDP R +
Sbjct: 6 YKILGVDRNATDEEIKKAFRELAKKWHPDLHPENKQEAEEKFKEISEAYEVLSDPQKRRM 65
Query: 111 YDMSLVGRRRTTRTASFGCSGGSGFH 136
YD T T FG +GG F+
Sbjct: 66 YDQ--------TGTVDFG-AGGQNFN 82
>sp|B1HUD0|DNAJ_LYSSC Chaperone protein DnaJ OS=Lysinibacillus sphaericus (strain C3-41)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 56 YEVLRVEPTATISEIKTAYRSLAKVYHPDLS---GNGRDFIEIHNAYETLSDPTARAVYD 112
YEVL + +AT EIK AYR L+K YHPDL+ G F EI AYE LSD +A YD
Sbjct: 7 YEVLGLTKSATKDEIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYD 66
Query: 113 M 113
Sbjct: 67 Q 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,144,846
Number of Sequences: 539616
Number of extensions: 2309827
Number of successful extensions: 6739
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 4876
Number of HSP's gapped (non-prelim): 1106
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)