BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042526
(284 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana
GN=RH13 PE=2 SV=3
Length = 826
Score = 154 bits (390), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 94/128 (73%)
Query: 12 VGNGPDDAQEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQ 71
V DD EE V E EI EF AW+ +RLHPLLMKSIY+L FKE T I KA A+Q
Sbjct: 168 VSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQ 227
Query: 72 RKDVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINP 131
KDVIGAAET SGKT AFGLP LQRLL+EREK K+ KGEEA+KYA G+LRALII P
Sbjct: 228 GKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITP 287
Query: 132 TRELALQV 139
TRELALQV
Sbjct: 288 TRELALQV 295
>sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp.
japonica GN=Os04g0510400 PE=2 SV=2
Length = 832
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 79/108 (73%)
Query: 32 EFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGL 91
E AW ELRLHPLL+ ++ +LGFKE T I KA PA AHQ KDVIGAAET SGKT AFGL
Sbjct: 196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 255
Query: 92 PALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
P LQRLLEE+EKA ++ E ++ + + LRALI+ PTRELA QV
Sbjct: 256 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQV 303
>sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp.
indica GN=OsI_016050 PE=2 SV=2
Length = 832
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 79/108 (73%)
Query: 32 EFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGL 91
E AW ELRLHPLL+ ++ +LGFKE T I KA PA AHQ KDVIGAAET SGKT AFGL
Sbjct: 196 EVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGL 255
Query: 92 PALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
P LQRLLEE+EKA ++ E ++ + + LRALI+ PTRELA QV
Sbjct: 256 PILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQV 303
>sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum
GN=ddx24 PE=3 SV=1
Length = 940
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 20 QEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAA 79
Q+ + E + + WN L PL++K + LGF + T I + IP DVIGAA
Sbjct: 280 QKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAA 339
Query: 80 ETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGH---------------- 123
+T SGKT AFG+P +QR+L+ K + +E K + + +
Sbjct: 340 QTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEEEEGRS 399
Query: 124 -----LRALIINPTRELALQVL-----MVASPSLKSNSLTLAMAA 158
L +L+I PTRELA+QV +++ +LK S+ MA+
Sbjct: 400 KEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMAS 444
>sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=HAS1 PE=3 SV=1
Length = 586
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 29 ISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRA 88
+ST+ A++EL L M SI ++GF + T I + IP L KDV+GAA+T SGKT A
Sbjct: 107 VSTDAQAFSELNLSDKTMMSINEMGFTKMTEIQRRGIPPLLAG-KDVLGAAKTGSGKTLA 165
Query: 89 FGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLK 148
F +PA++ L + ++ P+ +++ PTRELALQ+ VA +K
Sbjct: 166 FLIPAIEML----------------NSLRFKPRNGTGVIVVTPTRELALQIFGVARELMK 209
Query: 149 SNSLTLAMAAG 159
++S T + G
Sbjct: 210 NHSQTYGVVIG 220
>sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAS1 PE=1 SV=1
Length = 505
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 24/147 (16%)
Query: 26 EAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGK 85
E E +T + + EL+L +K+I K+GF TS+ IP L R DV+GAA+T SGK
Sbjct: 34 EGEQTTCVEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGR-DVLGAAKTGSGK 92
Query: 86 TRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASP 145
T AF +PA++ L + K+ P+ ++I PTRELALQ+ VA
Sbjct: 93 TLAFLIPAIELL----------------HSLKFKPRNGTGIIVITPTRELALQIFGVARE 136
Query: 146 SLKSNSLTLAMAAGSPLLTSEHSNRRK 172
++ +S T + G +NRR+
Sbjct: 137 LMEFHSQTFGIVIGG-------ANRRQ 156
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 29 ISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRA 88
I+T ++EL L MK+I ++GF + T I + IP L KDV+GAA+T SGKT A
Sbjct: 102 IATNATDFSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLL-AGKDVLGAAKTGSGKTLA 160
Query: 89 FGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLK 148
F +PA++ L + ++ P+ A+++ PTRELALQ+ VA +K
Sbjct: 161 FLIPAIEML----------------SSLRFKPRNGTGAIVVTPTRELALQIFGVARELMK 204
Query: 149 SNSLTLAMAAG 159
++S T + G
Sbjct: 205 NHSQTYGVVIG 215
>sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=has1 PE=1 SV=1
Length = 578
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 27 AEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKT 86
A +++ + +++L+L + K+I ++GF+ T I K IP L R DV+GAA+T SGKT
Sbjct: 82 ASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGR-DVLGAAKTGSGKT 140
Query: 87 RAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPS 146
AF +P ++ L A K+ P+ +II+PTRELALQ+ VA
Sbjct: 141 LAFLIPTIEMLY----------------ALKFKPRNGTGVIIISPTRELALQIFGVAKEL 184
Query: 147 LKSNSLTLAMAAG 159
LK + T + G
Sbjct: 185 LKYHHQTFGIVIG 197
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 17/129 (13%)
Query: 31 TEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFG 90
+E A++EL L MK+I ++GF + T I + IP L KDV+GAA+T SGKT AF
Sbjct: 109 SEAQAFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAG-KDVLGAAKTGSGKTLAFL 167
Query: 91 LPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSN 150
+PA++ L + K+ P+ ++++PTRELALQ+ VA +K +
Sbjct: 168 IPAVEML----------------RSLKFKPRNGTGVIVVSPTRELALQIFGVARDLMKHH 211
Query: 151 SLTLAMAAG 159
S T + G
Sbjct: 212 SQTYGIVIG 220
>sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP28 PE=3
SV=1
Length = 581
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 11/104 (10%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
WNE ++ L+ I +LG++E TS+ +A IP LA +++DV+G AET SGKT AF +P L
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIP-LALKKRDVVGVAETGSGKTLAFLIPVLN 228
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
+L E K + E P G LI+ PTRELALQ+
Sbjct: 229 YILSIDENYLKYEKISNE------PVG----LILAPTRELALQI 262
>sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=HAS1 PE=3 SV=1
Length = 497
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 35 AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPAL 94
++++L+L MK+I K+GF + T++ IP L KDV+GAA+T SGKT AF +PA+
Sbjct: 35 SFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLL-AGKDVLGAAKTGSGKTLAFLIPAI 93
Query: 95 QRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTL 154
+ L + K+ P+ ++I PTRELALQ+ VA ++ +S T
Sbjct: 94 EML----------------HSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTF 137
Query: 155 AMAAGSPLLTSEHSNRRK 172
+ G +NRR+
Sbjct: 138 GIVIGG-------ANRRQ 148
>sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=has1 PE=3 SV=1
Length = 606
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 13 GNGPDDAQEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQR 72
GNG D + V + E + EL L MK I +GF+ T I + IP L R
Sbjct: 104 GNGADLPSLDAVRLPQTDGEPKKFTELNLSEKTMKGIQDMGFETMTEIQQRTIPPLLAGR 163
Query: 73 KDVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPT 132
DV+GAA+T SGKT +F +PA++ L A ++ P+ L+++PT
Sbjct: 164 -DVLGAAKTGSGKTLSFLIPAVEML----------------SALRFKPRNGTGVLVVSPT 206
Query: 133 RELALQVLMVASPSLKSNSLTLAMAAG 159
RELALQ+ VA + +S T + G
Sbjct: 207 RELALQIFGVARELMAHHSQTYGIVIG 233
>sp|Q74Z73|HAS1_ASHGO ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HAS1
PE=3 SV=2
Length = 504
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 24/137 (17%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
++EL L +K+I K+GF + T + IP L R DV+GAA+T SGKT AF LPA++
Sbjct: 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGR-DVLGAAKTGSGKTLAFLLPAIE 99
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L + K+ P+ ++I PTRELALQ+ VA ++ +S T
Sbjct: 100 ML----------------HSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQTFG 143
Query: 156 MAAGSPLLTSEHSNRRK 172
+ G +NRR+
Sbjct: 144 IVIGG-------ANRRQ 153
>sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MAK5 PE=3 SV=1
Length = 772
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
W+ + LHP L +S F T+I IPA R DV+G AET SGKT A+ LP L
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLPILH 232
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVL 140
LL +R+ A + K L AL++ PTRELALQV+
Sbjct: 233 YLLGQRKSKAGI-------------KRPLSALVLCPTRELALQVM 264
>sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MAK5 PE=3 SV=1
Length = 772
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
W+ + LHP L +S F T+I IPA R DV+G AET SGKT A+ LP L
Sbjct: 174 WSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLPILH 232
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVL 140
LL +R+ A + K L AL++ PTRELALQV+
Sbjct: 233 YLLGQRKSKAGI-------------KRPLSALVLCPTRELALQVM 264
>sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DRS1 PE=3 SV=1
Length = 808
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 35 AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPAL 94
+++ + L + K + +GF E T I IP +A Q KDV+G AET SGKT AF +P L
Sbjct: 286 SFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIP-IAMQGKDVVGGAETGSGKTAAFLIPIL 344
Query: 95 QRLLEEREKAAKMLEEKGEEAEKYAPKG--HLRALIINPTRELALQVLMVASPSLKSNSL 152
+RLL Y PK R I PTRELA+Q VA+ +
Sbjct: 345 ERLL-------------------YRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTDI 385
Query: 153 TLAMAAG 159
T A+ AG
Sbjct: 386 TFALLAG 392
>sp|Q0CI35|MAK5_ASPTN ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=mak5 PE=3 SV=2
Length = 774
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 26 EAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGK 85
E + + AW L L P ++ S+ KL F T++ K+ IP + DV+G A T SGK
Sbjct: 194 EEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGH-DVVGKASTGSGK 252
Query: 86 TRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVL 140
T AFG+P L+ LE++ + K ++K E + ALI++PTRELA Q++
Sbjct: 253 TLAFGIPILEYYLEKKRRETKNKDDKKETSPI--------ALILSPTRELAHQLV 299
>sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=HAS1 PE=3 SV=1
Length = 494
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 26/155 (16%)
Query: 20 QEELVNEAEI-STEFD-AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIG 77
+EE+V +A++ S++ D ++ L L M++I K+GF + T + IP L R DV+G
Sbjct: 13 KEEVVVKADVESSDVDHSFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGR-DVLG 71
Query: 78 AAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELAL 137
AA+T SGKT AF LP ++ L + K+ P+ +II PTRELAL
Sbjct: 72 AAKTGSGKTLAFLLPTIELL----------------HSLKFKPRNGTGVIIITPTRELAL 115
Query: 138 QVLMVASPSLKSNSLTLAMAAGSPLLTSEHSNRRK 172
Q+ V ++ +S T + G +NRR+
Sbjct: 116 QIFGVVRELMEFHSQTFGIVIGG-------ANRRQ 143
>sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=mak5 PE=3 SV=1
Length = 757
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 20 QEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAA 79
QEE + A++S AW L L P ++ I K+ F TS+ KA IP + R DVIG A
Sbjct: 174 QEEEDDGADVS----AWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKA 228
Query: 80 ETESGKTRAFGLPALQRLLEE-REKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQ 138
T SGKT AFG+P L+ LE+ R K +K E + P AL+++PTRELA Q
Sbjct: 229 STGSGKTLAFGIPILEYYLEKLRSKT-----QKDSEKTETTPI----ALVLSPTRELAHQ 279
Query: 139 V 139
+
Sbjct: 280 L 280
>sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=HAS1 PE=3 SV=2
Length = 569
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 24/139 (17%)
Query: 34 DAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPA 93
D + +L L M++I +GF++ T + + IP L R DV+GAA+T SGKT AF +PA
Sbjct: 105 DKFEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGR-DVLGAAKTGSGKTLAFLIPA 163
Query: 94 LQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLT 153
++ L + K+ P+ ++++PTRELALQ+ VA + +S T
Sbjct: 164 IEMLY----------------SLKFKPRNGTGVIVVSPTRELALQIFGVARDLMAHHSQT 207
Query: 154 LAMAAGSPLLTSEHSNRRK 172
L + G +NRR+
Sbjct: 208 LGIVIGG-------ANRRQ 219
>sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=HAS1 PE=3 SV=1
Length = 610
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
++EL L M++I +GF+ T I + IP L KDV+GAA+T SGKT AF +PA++
Sbjct: 133 FDELNLSERTMEAIKTMGFESMTEIQRKAIPPLL-SGKDVLGAAKTGSGKTLAFLIPAIE 191
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L + ++ P+ ++++PTRELALQ+ VA ++ +S T
Sbjct: 192 ML----------------SSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQTFG 235
Query: 156 MAAG 159
+ G
Sbjct: 236 IVIG 239
>sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus GN=Ddx27
PE=1 SV=3
Length = 760
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 28 EISTEFD---AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESG 84
E ++E+D ++ ++ L L+K+I +GFK+ T I KA IP + KD+ A T +G
Sbjct: 175 EDASEYDKSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIP-VGLLGKDICACAATGTG 233
Query: 85 KTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVAS 144
KT AF LP L+RL+ + +AA R L++ PTREL +QV V
Sbjct: 234 KTAAFALPVLERLIYKPRQAAVT-----------------RVLVLVPTRELGIQVHSVTK 276
Query: 145 PSLKSNSLTLAMAAG 159
+ S+T +A G
Sbjct: 277 QLAQFCSITTCLAVG 291
>sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila
melanogaster GN=Dbp45A PE=2 SV=2
Length = 521
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 32 EFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPA-LAHQRKDVIGAAETESGKTRAFG 90
E + + L L P L+K + KLG K +T I + IPA LA Q D IGAA+T SGKT AF
Sbjct: 5 EANPFQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQ--DCIGAAKTGSGKTFAFA 62
Query: 91 LPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV---LMVASPSL 147
LP L+RL EE P H AL++ PT ELA Q+ +VA ++
Sbjct: 63 LPILERLSEE-------------------PVSHF-ALVLTPTHELAYQISEQFLVAGQAM 102
Query: 148 KSNSLTLA-----MAAGSPLLTSEHSNRRKPNKRKRTRKGGEDEKLDSLKW 193
++ M L+ H P + G + D+LK+
Sbjct: 103 GVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKY 153
>sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=has1 PE=3 SV=1
Length = 576
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 21/146 (14%)
Query: 18 DAQEELVNEAEISTEFDA----WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRK 73
DA+ L + +S DA ++EL L MK+I ++GF+ T I + IP R
Sbjct: 78 DAEAPLPSTMGLSLPTDAAPQKFDELNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGR- 136
Query: 74 DVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTR 133
D++GAA+T SGKT AF +PA++ L A ++ P+ +II PTR
Sbjct: 137 DILGAAKTGSGKTLAFLIPAVEML----------------SALRFKPRNGTGVIIITPTR 180
Query: 134 ELALQVLMVASPSLKSNSLTLAMAAG 159
ELALQ+ VA + +S T + G
Sbjct: 181 ELALQIFGVAKELCEFHSQTYGIVIG 206
>sp|A1DMT9|MAK5_NEOFI ATP-dependent RNA helicase mak5 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mak5
PE=3 SV=1
Length = 777
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 25 NEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESG 84
E + + AW+ L L P ++ + K+ F TS+ +A IP + + DVIG A T SG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 85 KTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
KT AFG+P L+ LE++ +EK E + ALI++PTRELA Q+
Sbjct: 251 KTLAFGIPILEHYLEKKRDDISAEKEKKSEKDSTPI-----ALILSPTRELAHQL 300
>sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MAK5 PE=3
SV=2
Length = 781
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 22/132 (16%)
Query: 8 TVVVVGNGPDDAQEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPA 67
T + +G D +E V+ A AW L L P ++ +I KL F + T I K IP
Sbjct: 196 TFGALADGNDYKDQEDVDMA-------AWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE 248
Query: 68 LAHQRKDVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRAL 127
+ DVIG A+T SGKT AFG+P ++R LE +E+ K + P +L
Sbjct: 249 IVAGH-DVIGKAQTGSGKTLAFGIPMVERWLEMQEQGVK----------RTGP----MSL 293
Query: 128 IINPTRELALQV 139
+++PTRELA Q+
Sbjct: 294 VLSPTRELAKQL 305
>sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium
discoideum GN=ddx27 PE=3 SV=1
Length = 783
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 18/131 (13%)
Query: 29 ISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRA 88
+ E + EL L L+K++ KLGF + T I IP LA KD++ +A T SGKT A
Sbjct: 185 VEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIP-LALNGKDILASASTGSGKTAA 243
Query: 89 FGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLK 148
F LP L+RLL ++E A +R LI+ PTRELALQ V +
Sbjct: 244 FLLPVLERLL-------------FRDSEYRA----IRVLILLPTRELALQCQSVMENLAQ 286
Query: 149 SNSLTLAMAAG 159
+++T + G
Sbjct: 287 FSNITSCLIVG 297
>sp|Q5BCI0|MAK5_EMENI ATP-dependent RNA helicase mak5 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mak5
PE=3 SV=1
Length = 770
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 35 AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPAL 94
AW L L P + S+ KL F TS+ K+ IP + DVIG A T SGKT AFGLP L
Sbjct: 198 AWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGH-DVIGKASTGSGKTLAFGLPIL 256
Query: 95 QRLLE-EREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
+ LE ER K EEK EK ALI++PTRELA Q+
Sbjct: 257 EHYLERERRKTIDSEEEK----EKIPI-----ALILSPTRELAHQL 293
>sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=SPB4 PE=3 SV=2
Length = 617
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 36 WNELR--LHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPA 93
W L+ L P + ++I LGF T + A IP L+ KDV+ A T SGKT AF +P
Sbjct: 10 WKNLQYDLQPWIKEAIASLGFPTMTPVQAATIPLLSGN-KDVVVEAVTGSGKTLAFAIPV 68
Query: 94 LQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
LQ++ + +E+GE EK +GH+ A++++PTRELA Q+
Sbjct: 69 LQKVSNRLYDS----QEEGEAPEK-VKQGHMLAIVLSPTRELASQI 109
>sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=has1 PE=3 SV=1
Length = 625
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+ EL L +K+I ++GF+ T I + IP L R DV+GAA+T SGKT +F +PA++
Sbjct: 145 FTELGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGR-DVLGAAKTGSGKTLSFLIPAVE 203
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L A ++ P+ L+++PTRELALQ+ VA + +S T
Sbjct: 204 ML----------------SALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTYG 247
Query: 156 MAAG 159
+ G
Sbjct: 248 IVIG 251
>sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DBP10 PE=3 SV=1
Length = 926
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 19/121 (15%)
Query: 39 LRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQRLL 98
L L L++K+I + GFK+ T I + IP L + KDV+G A T SGKT AF LP L++L
Sbjct: 107 LGLSQLVLKNIARKGFKQPTPIQRKTIP-LVLEGKDVVGMARTGSGKTAAFVLPMLEKL- 164
Query: 99 EEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLAMAA 158
+ ++ K RA+I++P+RELALQ L V L LAM
Sbjct: 165 -----------------KVHSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLAMLV 207
Query: 159 G 159
G
Sbjct: 208 G 208
>sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=has1
PE=3 SV=1
Length = 609
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+ EL L ++ I ++GF+ T I + IP L R DV+GAA+T SGKT AF +PA++
Sbjct: 130 FTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGR-DVLGAAKTGSGKTLAFLIPAIE 188
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L A ++ P+ ++++PTRELALQ+ VA L ++S T
Sbjct: 189 ML----------------SALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYG 232
Query: 156 MAAG 159
+ G
Sbjct: 233 IVIG 236
>sp|Q6BSM3|SPB4_DEBHA ATP-dependent rRNA helicase SPB4 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SPB4 PE=3 SV=1
Length = 614
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 35 AWNELR--LHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLP 92
W+ L+ LHP + ++I LG+ T + + IP L KDV+ A T SGKT AF +P
Sbjct: 9 TWSVLKCDLHPWIKEAIKSLGYPTMTPVQASTIP-LFSGNKDVVVEAVTGSGKTLAFVIP 67
Query: 93 ALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSL 147
LQ+L ++E+GE E KGH+ ++I++PTRELA Q+ V L
Sbjct: 68 VLQKL----SNRLYNIDEEGENPEP-VKKGHMLSIILSPTRELAKQIQTVFDKVL 117
>sp|A2QWW0|MAK5_ASPNC ATP-dependent RNA helicase mak5 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=mak5 PE=3 SV=1
Length = 766
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 35 AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPAL 94
AW L L P ++ S+ K+ F T + K+ IP + DVIG A T SGKT AFG+P L
Sbjct: 193 AWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQILDGH-DVIGKASTGSGKTLAFGIPIL 251
Query: 95 QRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
+ LE+R + + +E E+ + AP ALI++PTRELA Q+
Sbjct: 252 EHYLEKRRQDLRAGKE--EKKKDTAPI----ALIMSPTRELAHQL 290
>sp|Q4WMS3|MAK5_ASPFU ATP-dependent RNA helicase mak5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mak5
PE=3 SV=2
Length = 777
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 25 NEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESG 84
E + + AW+ L L P ++ + K+ F TS+ +A IP + + DVIG A T SG
Sbjct: 192 TEEDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQIL-EGHDVIGKASTGSG 250
Query: 85 KTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQV 139
KT AFG+P L+ LE++ +E+ E + ALI++PTRELA Q+
Sbjct: 251 KTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPI-----ALILSPTRELAHQL 300
>sp|P0A4D8|EXP9_STRR6 Probable ATP-dependent RNA helicase exp9 OS=Streptococcus
pneumoniae (strain ATCC BAA-255 / R6) GN=exp9 PE=3 SV=1
Length = 524
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+NEL L L+ I K GF E++ I + IP LA + KDVIG A+T +GKT AFGLP L+
Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIP-LALEGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQ 138
++ + EEA ++AL+I PTRELA+Q
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQ 84
>sp|P0A4D7|EXP9_STRPN Probable ATP-dependent RNA helicase exp9 OS=Streptococcus
pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
GN=exp9 PE=3 SV=1
Length = 524
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+NEL L L+ I K GF E++ I + IP LA + KDVIG A+T +GKT AFGLP L+
Sbjct: 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIP-LALEGKDVIGQAQTGTGKTAAFGLPTLE 61
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQ 138
++ + EEA ++AL+I PTRELA+Q
Sbjct: 62 KI-------------RTEEA-------TIQALVIAPTRELAVQ 84
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS)
GN=HAS1 PE=3 SV=1
Length = 604
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+ EL L +K+I ++GF+ T I + IP L R DV+GAA+T SGKT +F +PA++
Sbjct: 126 FTELNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGR-DVLGAAKTGSGKTLSFLIPAVE 184
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L A ++ P+ ++++PTRELALQ+ VA + +S T
Sbjct: 185 ML----------------SALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYG 228
Query: 156 MAAG 159
+ G
Sbjct: 229 IVIG 232
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 27/165 (16%)
Query: 8 TVVVVGNGPDDAQEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPA 67
+ VV P DA E+V+ A E ++ + L M+S+ +GF+ T + + IP
Sbjct: 108 STAVVTTAPADA--EVVHIAS-DAERKPFSTIPLSENTMQSLKDMGFETMTPVQEKTIPP 164
Query: 68 LAHQRKDVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRAL 127
L R DV+GAA+T SGKT AF +PA++ L K+ P+ +
Sbjct: 165 LLAGR-DVLGAAKTGSGKTLAFLIPAIEML----------------RKLKFKPRNGTGVI 207
Query: 128 IINPTRELALQVLMVASPSLKSNSLTLAMAAGSPLLTSEHSNRRK 172
+++PTRELALQ+ VA + ++S TL + G +NRR+
Sbjct: 208 VVSPTRELALQIYGVARDLMANHSQTLGIVIGG-------NNRRQ 245
>sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=has1
PE=3 SV=2
Length = 622
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+ EL L +K+I +GF+ T I + IP L R DV+GAA+T SGKT +F +PA++
Sbjct: 142 FTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGR-DVLGAAKTGSGKTLSFLIPAVE 200
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L A ++ P+ ++++PTRELALQ+ VA + +S T
Sbjct: 201 ML----------------SALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYG 244
Query: 156 MAAG 159
+ G
Sbjct: 245 IVIG 248
>sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SPB4 PE=3 SV=1
Length = 596
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 35 AWNELR--LHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLP 92
+W++L+ + P + +I +GF+ T + + IP L KDV+ + T SGKT AF +P
Sbjct: 6 SWDDLKCEIQPWIRTAIESMGFETMTPVQASTIP-LFSGNKDVVVESVTGSGKTIAFVIP 64
Query: 93 ALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLK 148
L+RL++E +AK K H +LII+PTRELA Q+ V LK
Sbjct: 65 ILERLIKEEANSAKF------------KKSHFHSLIISPTRELASQIHDVIEDFLK 108
>sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana
GN=RH51 PE=2 SV=1
Length = 568
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 24/129 (18%)
Query: 48 SIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQRLLEEREKAAKM 107
+I ++GF+ T I I L + KDV+GAA T SGKT AF +PA++ L +ER
Sbjct: 103 AIKEMGFQYMTQIQAGSIQPLL-EGKDVLGAARTGSGKTLAFLIPAVELLFKER------ 155
Query: 108 LEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLAMAAGSPLLTSEH 167
++P+ ++I PTRELA+Q VA LK +S T++M G
Sbjct: 156 ----------FSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGG------- 198
Query: 168 SNRRKPNKR 176
+NRR +R
Sbjct: 199 NNRRSEAQR 207
>sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=HAS1 PE=3 SV=1
Length = 559
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 46 MKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQRLLEEREKAA 105
MK+I ++GF++ T + IP L R DV+GAA+T SGKT AF LPA++ L + K
Sbjct: 105 MKAIKEMGFQKMTKVQAKTIPPLLAGR-DVLGAAKTGSGKTLAFLLPAVELLYSLKIK-- 161
Query: 106 KMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLAMAAG 159
P+ +II PTRELALQ+ VA ++ +S T + G
Sbjct: 162 --------------PRNGTAVIIITPTRELALQIFGVARQLMEYHSQTCGIVIG 201
>sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1
PE=3 SV=1
Length = 622
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
+ EL L +K+I +GF T I + IP L R DV+GAA+T SGKT +F +PA++
Sbjct: 142 FTELGLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGR-DVLGAAKTGSGKTLSFLIPAVE 200
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
L A ++ P+ ++++PTRELALQ+ VA + +S T
Sbjct: 201 ML----------------SALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYG 244
Query: 156 MAAG 159
+ G
Sbjct: 245 IVIG 248
>sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus GN=DDX27
PE=2 SV=1
Length = 765
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 25/137 (18%)
Query: 28 EISTEFD---AWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESG 84
E ++++D ++ ++ L L+K+I +GFK+ T I KA IP + KD+ A T +G
Sbjct: 178 EDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIP-VGLLGKDICACAATGTG 236
Query: 85 KTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGH--LRALIINPTRELALQVLMV 142
KT AF LP L+RL+ Y P+ R L++ PTREL +QV V
Sbjct: 237 KTAAFALPVLERLI-------------------YKPRQAPVTRVLVLVPTRELGIQVHSV 277
Query: 143 ASPSLKSNSLTLAMAAG 159
+ S+T +A G
Sbjct: 278 TKQLAQFCSITTCLAVG 294
>sp|A5E2I8|SPB4_LODEL ATP-dependent rRNA helicase SPB4 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SPB4 PE=3 SV=1
Length = 637
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 36 WNELR--LHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPA 93
W LR L P L +I L + T + + IP L+ KDVI A T SGKT AF +P
Sbjct: 10 WENLRVDLEPWLKDAIRSLNYPTMTPVQASTIPLLSGN-KDVIVEAVTGSGKTLAFAIPV 68
Query: 94 LQRLLEEREKAAKMLEEKGEEAEKYAP--KGHLRALIINPTRELALQVLMVASPSL 147
LQ K +K L + E EK P +GH+ A+++ PTRELA Q+ MV L
Sbjct: 69 LQ-------KVSKRLYQVPEGEEKPEPVKRGHMLAIVMAPTRELAKQIQMVFDKVL 117
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP10 PE=3 SV=2
Length = 914
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 41 LHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQRLLEE 100
L L+K+I K GFK+ T I + IP L + +DV+G A T SGKT AF LP +++L
Sbjct: 106 LSKFLLKNIAKKGFKQPTPIQRKTIP-LVMESRDVVGMARTGSGKTAAFVLPVVEKL--- 161
Query: 101 REKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLAMAAGS 160
+ ++PK +RA+I++P+RELALQ K L + G
Sbjct: 162 ---------------KSHSPKVGVRAVILSPSRELALQTFKQVKEFTKGTDLRSIVLIGG 206
Query: 161 PLLTSEHSN 169
L + S+
Sbjct: 207 DSLEDQFSS 215
>sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=PRP5 PE=3 SV=2
Length = 1184
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
W ++ L M ++G+ T+I IP +A +D+IG A+T SGKT AFG+P ++
Sbjct: 546 WAQMGLLQQTMDVFTRVGYARPTAIQAQAIP-IAESGRDLIGVAKTGSGKTLAFGIPMIR 604
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
+L++R P LI+ PTREL+LQ++ P L ++ +T+
Sbjct: 605 HVLDQR---------------PLKPADGPIGLILAPTRELSLQIVNELKPFLNASGITIK 649
Query: 156 MAAG 159
A G
Sbjct: 650 CAYG 653
>sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1
Length = 1151
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 36 WNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQRKDVIGAAETESGKTRAFGLPALQ 95
W++ L + I KLG++ TSI IPA+ R DVIG A+T SGKT AF LP +
Sbjct: 556 WSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGR-DVIGVAKTGSGKTIAFLLPMFR 614
Query: 96 RLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINPTRELALQVLMVASPSLKSNSLTLA 155
+ ++R KG + P G LI+ PTRELA Q+ P LK+ L
Sbjct: 615 HIRDQRPL-------KGSD----GPIG----LIMTPTRELATQIHKECKPFLKAMGLRAV 659
Query: 156 MAAGSPLLTSEHSNRRK 172
A G ++ + ++ ++
Sbjct: 660 CAYGGAIIKDQIADLKR 676
>sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=HAS1 PE=3 SV=2
Length = 567
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 36/161 (22%)
Query: 12 VGNGPDDAQEELVNEAEISTEFDAWNELRLHPLLMKSIYKLGFKESTSILKARIPALAHQ 71
V + DDAQ + +A +S M++I +GFK T + IP L
Sbjct: 93 VVDNEDDAQNDKFEDAGLSEP------------TMRAISDMGFKTMTKVQAKTIPPLL-A 139
Query: 72 RKDVIGAAETESGKTRAFGLPALQRLLEEREKAAKMLEEKGEEAEKYAPKGHLRALIINP 131
KDV+GAA+T SGKT AF +PA++ L + K+ P+ ++++P
Sbjct: 140 GKDVLGAAKTGSGKTLAFLIPAIELLY----------------SLKFKPRNGTGVIVVSP 183
Query: 132 TRELALQVLMVASPSLKSNSLTLAMAAGSPLLTSEHSNRRK 172
TRELALQ+ VA + ++ T + G +NRR+
Sbjct: 184 TRELALQIFGVARELMAHHTQTFGIVIGG-------ANRRQ 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.126 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,517,171
Number of Sequences: 539616
Number of extensions: 4669379
Number of successful extensions: 42409
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 1152
Number of HSP's that attempted gapping in prelim test: 31620
Number of HSP's gapped (non-prelim): 7255
length of query: 284
length of database: 191,569,459
effective HSP length: 116
effective length of query: 168
effective length of database: 128,974,003
effective search space: 21667632504
effective search space used: 21667632504
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)