Your job contains 1 sequence.
>042538
FAHGKEELRSTLFPTTKNKSEAQICKSFTTGSCIYGSKCRFIHQVMTDSALVLTIQMEDH
SMKACVCESPVTPVTFKPRLTNTAIKPEHTRKTTALVNKHVQSRATSTSSRDNWSPQDDG
IEVTLPCHPSKTPPRVKVDEYIDTVLCCPTTAARRRLPVFTKICPEY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042538
(167 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00003864 - symbol:oma-1 species:6239 "Caenorhabd... 118 1.2e-05 1
UNIPROTKB|G5EC86 - symbol:oma-1 "Protein OMA-1" species:6... 118 1.2e-05 1
WB|WBGene00003231 - symbol:mex-6 species:6239 "Caenorhabd... 118 1.5e-05 1
WB|WBGene00004078 - symbol:pos-1 species:6239 "Caenorhabd... 114 2.4e-05 1
WB|WBGene00013796 - symbol:Y116A8C.19 species:6239 "Caeno... 111 2.8e-05 1
DICTYBASE|DDB_G0285973 - symbol:DDB_G0285973 "Butyrate re... 116 2.8e-05 1
WB|WBGene00003388 - symbol:moe-3 species:6239 "Caenorhabd... 112 9.7e-05 1
WB|WBGene00003865 - symbol:oma-2 species:6239 "Caenorhabd... 112 0.00011 1
WB|WBGene00009539 - symbol:F38C2.7 species:6239 "Caenorha... 104 0.00034 1
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 98 0.00035 2
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 98 0.00035 2
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 100 0.00037 2
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 100 0.00037 2
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 100 0.00037 2
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 100 0.00037 2
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 100 0.00037 2
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 100 0.00037 2
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 100 0.00037 2
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 98 0.00050 2
WB|WBGene00013794 - symbol:dct-13 species:6239 "Caenorhab... 102 0.00063 1
WB|WBGene00003230 - symbol:mex-5 species:6239 "Caenorhabd... 107 0.00069 1
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 100 0.00069 1
>WB|WBGene00003864 [details] [associations]
symbol:oma-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 1 FAHGKEELRSTLF-PTTKNKSEAQICKSFTT-GSCIYGSKCRFIH 43
FAHG+EELR T P NK + ++C +TT G C YG +C FIH
Sbjct: 135 FAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIH 179
>UNIPROTKB|G5EC86 [details] [associations]
symbol:oma-1 "Protein OMA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 1 FAHGKEELRSTLF-PTTKNKSEAQICKSFTT-GSCIYGSKCRFIH 43
FAHG+EELR T P NK + ++C +TT G C YG +C FIH
Sbjct: 135 FAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIH 179
>WB|WBGene00003231 [details] [associations]
symbol:mex-6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA] [GO:0032880 "regulation of
protein localization" evidence=IGI] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0019901 "protein kinase
binding" evidence=IPI] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0009792 GO:GO:0002009
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0010171
GO:GO:0040011 GO:GO:0032880 GO:GO:0003730 eggNOG:COG5063
GO:GO:0043186 GeneTree:ENSGT00530000063262 EMBL:Z48009
HOGENOM:HOG000113570 PIR:T18624 RefSeq:NP_496043.1
ProteinModelPortal:Q09436 SMR:Q09436 DIP:DIP-26165N IntAct:Q09436
MINT:MINT-1040479 STRING:Q09436 PaxDb:Q09436 EnsemblMetazoa:AH6.5.1
EnsemblMetazoa:AH6.5.2 GeneID:174504 KEGG:cel:CELE_AH6.5 UCSC:AH6.5
CTD:174504 WormBase:AH6.5 InParanoid:Q09436 NextBio:884312
Uniprot:Q09436
Length = 467
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/122 (31%), Positives = 59/122 (48%)
Query: 1 FAHGKEELRSTLFPTT--KNKSEAQICKSFTTGS---CIYGSKCRFIHQVMTDSALVLTI 55
FAHG +ELR++ PT NK + ++CK+F G C YG +C F+H T+ +
Sbjct: 297 FAHGLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHPSDTEFQNIPPY 356
Query: 56 Q---MEDHSMKACVCESPVTPVTFKPRLTNTAIKPEHTRKTTALVNKHVQSR--ATSTSS 110
Q +E+H + E V ++PR +T+ K K T L ++V S +
Sbjct: 357 QRKMVEEHDS---IPEDYVV-ARYQPRFMHTSGKATTPTKVT-LKQRNVAGSMMCLSNTG 411
Query: 111 RD 112
RD
Sbjct: 412 RD 413
>WB|WBGene00004078 [details] [associations]
symbol:pos-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA;IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0008340 GO:GO:0009792 GO:GO:0008266 GO:GO:0008270
GO:GO:0003730 GO:GO:0009880 GO:GO:0001106 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:FO081326 EMBL:AB006208 PIR:T37246
RefSeq:NP_505172.1 UniGene:Cel.19584 ProteinModelPortal:G5EF15
SMR:G5EF15 IntAct:G5EF15 EnsemblMetazoa:F52E1.1 GeneID:179224
KEGG:cel:CELE_F52E1.1 CTD:179224 WormBase:F52E1.1 OMA:QFIHKLV
ChEMBL:CHEMBL1293304 NextBio:904448 Uniprot:G5EF15
Length = 264
Score = 114 (45.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 1 FAHGKEELRSTLFPTTKN--KSEAQICKSFT-TGSCIYGSKCRFIHQVMTDSALVL 53
FAHG ELR + P +N K + +C F+ TG+C YG++C+FIH+++ +A L
Sbjct: 121 FAHGVHELRLPMNPRGRNHPKYKTVLCDKFSMTGNCKYGTRCQFIHKIVDGNAAKL 176
>WB|WBGene00013796 [details] [associations]
symbol:Y116A8C.19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
HSSP:P22893 eggNOG:COG5063 GeneTree:ENSGT00530000063262
EMBL:AL117204 HOGENOM:HOG000114669 PIR:T31491 RefSeq:NP_503019.1
ProteinModelPortal:Q9U2V2 SMR:Q9U2V2 STRING:Q9U2V2
EnsemblMetazoa:Y116A8C.19 GeneID:178477 KEGG:cel:CELE_Y116A8C.19
UCSC:Y116A8C.19 CTD:178477 WormBase:Y116A8C.19 InParanoid:Q9U2V2
NextBio:901288 Uniprot:Q9U2V2
Length = 196
Score = 111 (44.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSALVLTIQMED 59
FAH ELR T T + +C F TTG C YG++C+FIH+ + ++ + +M D
Sbjct: 106 FAHSVHELRFTQAKKTHRNYKTVLCDKFSTTGYCKYGARCQFIHRALGSTSTTESAEMAD 165
Query: 60 HSM 62
+
Sbjct: 166 FKL 168
>DICTYBASE|DDB_G0285973 [details] [associations]
symbol:DDB_G0285973 "Butyrate response factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0285973 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000082 eggNOG:COG5063 RefSeq:XP_637949.2
ProteinModelPortal:Q54MG5 SMR:Q54MG5 EnsemblProtists:DDB0218764
GeneID:8625376 KEGG:ddi:DDB_G0285973 InParanoid:Q54MG5 OMA:WSSDEAS
Uniprot:Q54MG5
Length = 437
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIH 43
FAHG++ELRS + K K+E CK+F + GSC YGS+CRFIH
Sbjct: 218 FAHGRDELRSVM-RHPKYKTET--CKTFYSIGSCPYGSRCRFIH 258
>WB|WBGene00003388 [details] [associations]
symbol:moe-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0048599 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z81521
HOGENOM:HOG000016873 PIR:T21620 RefSeq:NP_496795.1
UniGene:Cel.15255 ProteinModelPortal:Q9XV46 SMR:Q9XV46
DIP:DIP-25142N IntAct:Q9XV46 MINT:MINT-1108588 STRING:Q9XV46
EnsemblMetazoa:F32A11.6 GeneID:174960 KEGG:cel:CELE_F32A11.6
UCSC:F32A11.6 CTD:174960 WormBase:F32A11.6 InParanoid:Q9XV46
OMA:HLAEDMA NextBio:886196 Uniprot:Q9XV46
Length = 367
Score = 112 (44.5 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 1 FAHGKEELR-STLFPTTKNKSEAQICKSFTT-GSCIYGSKCRFIHQVMTDSALVLTIQME 58
FAHG+EELR + L NK + ++C +TT G C YG +C FIH +A + ++
Sbjct: 153 FAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYGKRCLFIHPDNQPNAYIRADKLY 212
Query: 59 DHSMKACVCESPVTPVTFKPRLTNTAIKPEHTRKTTALVNKHVQSRATSTSSRDNW--SP 116
+ S + + + V + NT + + ++ + +QS +SS + SP
Sbjct: 213 EVSQRHALADLR-DHVESQIMTGNT--RNSYNQQPPPMGGLEMQSSPMKSSSDSSHMRSP 269
Query: 117 QDD-GIEVTLPCHPS 130
E T P HPS
Sbjct: 270 MAQMNCETTRP-HPS 283
>WB|WBGene00003865 [details] [associations]
symbol:oma-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0008270 GO:GO:0003676
EMBL:FO080486 GO:GO:0001556 eggNOG:COG5063 GO:GO:0043186
GeneTree:ENSGT00530000063262 PIR:T28994 RefSeq:NP_505069.1
ProteinModelPortal:Q23359 SMR:Q23359 DIP:DIP-26006N IntAct:Q23359
MINT:MINT-251688 STRING:Q23359 PaxDb:Q23359
EnsemblMetazoa:ZC513.6.1 EnsemblMetazoa:ZC513.6.2 GeneID:179183
KEGG:cel:CELE_ZC513.6 UCSC:ZC513.6 CTD:179183 WormBase:ZC513.6
HOGENOM:HOG000016873 InParanoid:Q23359 OMA:HIMTGGR NextBio:904278
Uniprot:Q23359
Length = 393
Score = 112 (44.5 bits), Expect = 0.00011, P = 0.00011
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 1 FAHGKEELRSTLFPTTKN-KSEAQICKSFTT-GSCIYGSKCRFIH 43
FAHG+EELR +L +N K ++C +TT G C YG +C FIH
Sbjct: 128 FAHGEEELRPSLIEARQNNKYRTKLCDKYTTTGLCPYGKRCLFIH 172
>WB|WBGene00009539 [details] [associations]
symbol:F38C2.7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82267
HOGENOM:HOG000114669 PIR:T21963 RefSeq:NP_502930.1
UniGene:Cel.12984 ProteinModelPortal:O45493 SMR:O45493
IntAct:O45493 STRING:O45493 EnsemblMetazoa:F38C2.7 GeneID:185463
KEGG:cel:CELE_F38C2.7 UCSC:F38C2.7 CTD:185463 WormBase:F38C2.7
InParanoid:O45493 NextBio:928376 Uniprot:O45493
Length = 203
Score = 104 (41.7 bits), Expect = 0.00034, P = 0.00034
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 1 FAHGKEELRSTLFPTTKNKS---EAQICKSF-TTGSCIYGSKCRFIHQVMTDSALVLTIQ 56
FAH ELR FP TK + +C +F TTG C YG +C+FIH+ M ++ + +
Sbjct: 111 FAHSVHELR---FPQTKRNHRNYKTVLCNNFSTTGHCKYGIRCQFIHRSMNSTSSNQSNK 167
Query: 57 MED 59
ME+
Sbjct: 168 MEN 170
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 98 (39.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIH 43
FAHG ELRS T K + ++C++F T G C YG +C FIH
Sbjct: 154 FAHGFHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIH 194
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 149 PTTAARRRLPVFTKI 163
PT + RRLP+F+++
Sbjct: 344 PTLDSNRRLPIFSRL 358
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 98 (39.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIH 43
FAHG ELRS T K + ++C++F T G C YG +C FIH
Sbjct: 156 FAHGFHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIH 196
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 149 PTTAARRRLPVFTKI 163
PT + RRLP+F+++
Sbjct: 345 PTLDSNRRLPIFSRL 359
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 100 (40.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 137 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 185
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 149 PTTAARRRLPVFTKI 163
PT RRLP+F+++
Sbjct: 319 PTLDNSRRLPIFSRL 333
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 98 (39.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQIC-KSFTTGSCIYGSKCRFIHQVMTDSA 50
FAHG ELR P+ K + ++C K + G C YGS+C FIH D A
Sbjct: 124 FAHGLGELRQ---PSRHPKYKTELCHKFYLQGRCPYGSRCHFIHNPSEDLA 171
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 152 AARRRLPVFTKI 163
AA RRLP+F +I
Sbjct: 310 AAPRRLPIFNRI 321
>WB|WBGene00013794 [details] [associations]
symbol:dct-13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:AL117204
HOGENOM:HOG000114669 PIR:T31489 RefSeq:NP_503017.1
ProteinModelPortal:Q9U2V4 SMR:Q9U2V4 STRING:Q9U2V4
EnsemblMetazoa:Y116A8C.17 GeneID:178476 KEGG:cel:CELE_Y116A8C.17
UCSC:Y116A8C.17 CTD:178476 WormBase:Y116A8C.17 InParanoid:Q9U2V4
NextBio:901284 Uniprot:Q9U2V4
Length = 205
Score = 102 (41.0 bits), Expect = 0.00064, P = 0.00063
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQ--ICKSFTT-GSCIYGSKCRFIHQVMTDSALVLTIQM 57
FAHG ELR TT+N + +C FTT G C YG++C+FIH+ M + ++
Sbjct: 115 FAHGVHELRCQ--QTTRNHRNYKTVLCDKFTTTGYCKYGARCQFIHRSMDTTPAAKPMET 172
Query: 58 ED 59
D
Sbjct: 173 AD 174
>WB|WBGene00003230 [details] [associations]
symbol:mex-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] [GO:0008187
"poly-pyrimidine tract binding" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IGI;IMP] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0019901
"protein kinase binding" evidence=IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0040007 GO:GO:0005813 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0032880 GO:GO:0003730
eggNOG:COG5063 GO:GO:0043186 GO:GO:0008187
GeneTree:ENSGT00530000063262 EMBL:Z82286 PIR:T26081
RefSeq:NP_502566.1 ProteinModelPortal:Q9XUB2 SMR:Q9XUB2
IntAct:Q9XUB2 STRING:Q9XUB2 PaxDb:Q9XUB2 EnsemblMetazoa:W02A2.7.1
EnsemblMetazoa:W02A2.7.2 GeneID:178296 KEGG:cel:CELE_W02A2.7
UCSC:W02A2.7 CTD:178296 WormBase:W02A2.7 HOGENOM:HOG000113570
InParanoid:Q9XUB2 OMA:RYHRVME BindingDB:Q9XUB2 ChEMBL:CHEMBL1293319
NextBio:900550 Uniprot:Q9XUB2
Length = 468
Score = 107 (42.7 bits), Expect = 0.00069, P = 0.00069
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 1 FAHGKEELRSTLFPTT--KNKSEAQICKSFT---TGSCIYGSKCRFIH 43
FAHG +ELR+T P NK + ++CK+F TG C YG +C F+H
Sbjct: 294 FAHGLKELRATDAPARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVH 341
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 100 (40.3 bits), Expect = 0.00069, P = 0.00069
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 1 FAHGKEELRSTLFPTTKNKSEAQICKSF-TTGSCIYGSKCRFIHQVMTDSAL 51
FAHG ELRS T K + ++C++F T G C YG +C FIH AL
Sbjct: 115 FAHGIHELRSL---TRHPKYKTELCRTFHTIGFCPYGPRCHFIHNAEERRAL 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.130 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 167 167 0.00075 108 3 11 22 0.38 32
30 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 595 (63 KB)
Total size of DFA: 160 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.49u 0.13s 16.62t Elapsed: 00:00:00
Total cpu time: 16.50u 0.13s 16.63t Elapsed: 00:00:00
Start: Fri May 10 12:34:53 2013 End: Fri May 10 12:34:53 2013