BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042539
(412 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 160/339 (47%), Gaps = 71/339 (20%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 83
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 141
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS--------------------- 180
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
PE+K R SF VGT +YVSP
Sbjct: 181 -----------------PESKQA--------------RANSF---------VGTAQYVSP 200
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQ-RTALTD 316
E++ + D WALG + Y+++ G PFR N F+ ++ +F + D
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 260
Query: 317 LIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
L+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 261 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 160/339 (47%), Gaps = 71/339 (20%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 87
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 145
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS--------------------- 184
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
PE+K R SF VGT +YVSP
Sbjct: 185 -----------------PESKQA--------------RANSF---------VGTAQYVSP 204
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQ-RTALTD 316
E++ + D WALG + Y+++ G PFR N F+ ++ +F + D
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 264
Query: 317 LIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
L+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 265 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 159/339 (46%), Gaps = 71/339 (20%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS--------------------- 183
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
PE+K R SF VGT +YVSP
Sbjct: 184 -----------------PESKQA--------------RANSF---------VGTAQYVSP 203
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQ-RTALTD 316
E++ + D WALG + Y+++ G PFR N F+ ++ +F + D
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 263
Query: 317 LIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
L+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 77/350 (22%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
++LG+G G VF +A C K + + A E ++L+++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYAC-----KKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
F+ L + ET L + GGD+ ++ +++ F FY ++I+ +EH
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH I YRDLKPEN+L+ G+V ++D L+ L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------------------------- 339
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
K G KTK + GT +++PE++
Sbjct: 340 -----------------KAGQTKTK---------------------GYAGTPGFMAPELL 361
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNR----KETFRNVLMKTPEFVGQRT-ALT 315
G+ ++F+VD++ALG+ YEM+ PFR + KE + VL + + + + A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 316 DLIQRLLEKDPVKRLGYLRGACE-IKEHVFFKGVRW-DLLTDVLRPPFIP 363
D + LL+KDP KRLG+ G+C+ ++ H F+ + W L +L PPF+P
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 77/350 (22%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
++LG+G G VF +A C K + + A E ++L+++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYAC-----KKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
F+ L + ET L + GGD+ ++ +++ F FY ++I+ +EH
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH I YRDLKPEN+L+ G+V ++D L+ L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------------------------- 339
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
K G KTK + GT +++PE++
Sbjct: 340 -----------------KAGQTKTK---------------------GYAGTPGFMAPELL 361
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNR----KETFRNVLMKTPEFVGQRT-ALT 315
G+ ++F+VD++ALG+ YEM+ PFR + KE + VL + + + + A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 316 DLIQRLLEKDPVKRLGYLRGACE-IKEHVFFKGVRW-DLLTDVLRPPFIP 363
D + LL+KDP KRLG+ G+C+ ++ H F+ + W L +L PPF+P
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 77/350 (22%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
++LG+G G VF +A C K + + A E ++L+++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYAC-----KKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
F+ L + ET L + GGD+ ++ +++ F FY ++I+ +EH
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH I YRDLKPEN+L+ G+V ++D L+ L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------------------------- 339
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
K G KTK + GT +++PE++
Sbjct: 340 -----------------KAGQTKTK---------------------GYAGTPGFMAPELL 361
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNR----KETFRNVLMKTPEFVGQRT-ALT 315
G+ ++F+VD++ALG+ YEM+ PFR + KE + VL + + + + A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 316 DLIQRLLEKDPVKRLGYLRGACE-IKEHVFFKGVRW-DLLTDVLRPPFIP 363
D + LL+KDP KRLG+ G+C+ ++ H F+ + W L +L PPF+P
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 77/350 (22%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
++LG+G G VF +A C K + + A E ++L+++
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYAC-----KKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
F+ L + ET L + GGD+ ++ +++ F FY ++I+ +EH
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH I YRDLKPEN+L+ G+V ++D L+ L
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------------------------- 339
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
K G KTK + GT +++PE++
Sbjct: 340 -----------------KAGQTKTK---------------------GYAGTPGFMAPELL 361
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNR----KETFRNVLMKTPEFVGQRT-ALT 315
G+ ++F+VD++ALG+ YEM+ PFR + KE + VL + + + + A
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
Query: 316 DLIQRLLEKDPVKRLGYLRGACE-IKEHVFFKGVRW-DLLTDVLRPPFIP 363
D + LL+KDP KRLG+ G+C+ ++ H F+ + W L +L PPF+P
Sbjct: 422 DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 85/354 (24%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR-V 76
++ + +K++G+GA G V LV + + R +A+K++ K + + ++ WE R +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHK----STRKVYAMKLLSKFEMIKRSDSA--FFWEERDI 122
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
++ + P++ +L + + D +L + Y PGGDL L + RFY +E++
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 179
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A++ +H+MG +RD+KP+N+L+ +SGH+ L DF +
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--------------------- 218
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
NK G+ + +A VGT +Y+S
Sbjct: 219 --------------------NKEGMVRCDTA---------------------VGTPDYIS 237
Query: 257 PEVVR---GDGHEF-AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEF 307
PEV++ GDG+ DWW++G+ YEML G TPF + T+ ++ + P+
Sbjct: 238 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 297
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVR--WDLLTDVLRP 359
+LI L V RLG G EIK H+FFK + W+ L D + P
Sbjct: 298 NDISKEAKNLICAFLTDREV-RLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAP 349
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 85/354 (24%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR-V 76
++ + +K++G+GA G V LV + + R +A+K++ K + + ++ WE R +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHK----STRKVYAMKLLSKFEMIKRSDSA--FFWEERDI 127
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
++ + P++ +L + + D +L + Y PGGDL L + RFY +E++
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 184
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A++ +H+MG +RD+KP+N+L+ +SGH+ L DF +
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--------------------- 223
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
NK G+ + +A VGT +Y+S
Sbjct: 224 --------------------NKEGMVRCDTA---------------------VGTPDYIS 242
Query: 257 PEVVR---GDGHEF-AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEF 307
PEV++ GDG+ DWW++G+ YEML G TPF + T+ ++ + P+
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 302
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVR--WDLLTDVLRP 359
+LI L V RLG G EIK H+FFK + W+ L D + P
Sbjct: 303 NDISKEAKNLICAFLTDREV-RLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAP 354
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 85/354 (24%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR-V 76
++ + +K++G+GA G V LV + + R +A+K++ K + + ++ WE R +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHK----STRKVYAMKLLSKFEMIKRSDSA--FFWEERDI 127
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
++ + P++ +L + + D +L + Y PGGDL L + RFY +E++
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 184
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A++ +H+MG +RD+KP+N+L+ +SGH+ L DF +
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--------------------- 223
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
NK G+ + +A VGT +Y+S
Sbjct: 224 --------------------NKEGMVRCDTA---------------------VGTPDYIS 242
Query: 257 PEVVR---GDGHEF-AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEF 307
PEV++ GDG+ DWW++G+ YEML G TPF + T+ ++ + P+
Sbjct: 243 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD 302
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVR--WDLLTDVLRP 359
+LI L V RLG G EIK H+FFK + W+ L D + P
Sbjct: 303 NDISKEAKNLICAFLTDREV-RLG-RNGVEEIKRHLFFKNDQWAWETLRDTVAP 354
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D + LK+LG+G+ G VFLV + + AR +A+KV+ K+TL + R + E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLV-KKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERD 78
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++HPF+ KL + +T+ L + + GGDL K+ +F+ ++FYL+E+
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
A++HLH++GI YRDLKPENIL+ + GH+ LTDF LS+ +
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 8/154 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAL 274
PEN L + +++ ++S D+ +++ SF GT EY++PEVV GH + DWW+
Sbjct: 154 PENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 275 GILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
G+L +EML GT PF+GK+RKET +L + P+F+ L++ L +++P RLG
Sbjct: 213 GVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA--QSLLRMLFKRNPANRLG 270
Query: 332 Y-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIP 363
G EIK H FF + W+ L + PPF P
Sbjct: 271 AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D + LK+LG+G+ G VFLV + + AR +A+KV+ K+TL + R + E
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLV-KKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERD 78
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++HPF+ KL + +T+ L + + GGDL K+ +F+ ++FYL+E+
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 136
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
A++HLH++GI YRDLKPENIL+ + GH+ LTDF LS+ +
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 89/155 (57%), Gaps = 8/155 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAL 274
PEN L + +++ ++S D+ +++ SF GT EY++PEVV GH + DWW+
Sbjct: 154 PENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 275 GILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
G+L +EML GT PF+GK+RKET +L + P+F+ L++ L +++P RLG
Sbjct: 213 GVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ--SLLRMLFKRNPANRLG 270
Query: 332 Y-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
G EIK H FF + W+ L + PPF P+
Sbjct: 271 AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPA 305
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D + LK+LG+G+ G VFLV + + AR +A+KV+ K+TL + R + E
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLV-KKISGSDARQLYAMKVLKKATLKVRDRV--RTKMERD 79
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++HPF+ KL + +T+ L + + GGDL K+ +F+ ++FYL+E+
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 137
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
A++HLH++GI YRDLKPENIL+ + GH+ LTDF LS+ +
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 178
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 8/154 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAL 274
PEN L + +++ ++S D+ +++ SF GT EY++PEVV GH + DWW+
Sbjct: 155 PENIL-LDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213
Query: 275 GILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
G+L +EML GT PF+GK+RKET +L + P+F+ L++ L +++P RLG
Sbjct: 214 GVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEA--QSLLRMLFKRNPANRLG 271
Query: 332 Y-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIP 363
G EIK H FF + W+ L + PPF P
Sbjct: 272 AGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 162/358 (45%), Gaps = 78/358 (21%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWEIRVLSRL 80
L++LGKG G VF V T + FA+KV+ K+ + +AK A +A E +L +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKI-FAMKVLKKAMIVRNAKDTAHTKA--ERNILEEV 78
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HPF+ L+ + +T GG L ++ +E+
Sbjct: 79 KHPFIVDLIYAFQT------------GGKLYLI------------------------LEY 102
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
L G + L+ E I + + L + ++ + + + L
Sbjct: 103 LSG-GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLK------------- 148
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
PEN L +++ ++S +G +++F GT EY++PE++
Sbjct: 149 --------------PENIM-LNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDL 317
GH AVDWW+LG L Y+ML G PF G+NRK+T +L + P ++ Q DL
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA--RDL 251
Query: 318 IQRLLEKDPVKRLGYLRG-ACEIKEHVFFKGVRW-DLLTDVLRPPFIP-SREENDLTE 372
+++LL+++ RLG G A E++ H FF+ + W +LL + PPF P + E D+++
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQ 309
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 161/358 (44%), Gaps = 78/358 (21%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWEIRVLSRL 80
L++LGKG G VF V T + FA+KV+ K+ + +AK A +A E +L +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKI-FAMKVLKKAMIVRNAKDTAHTKA--ERNILEEV 78
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HPF+ L+ + +T GG L ++ +E+
Sbjct: 79 KHPFIVDLIYAFQT------------GGKLYLI------------------------LEY 102
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
L G + L+ E I + + L + ++ + + + L
Sbjct: 103 LSG-GELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLK------------- 148
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV 260
PEN L +++ ++S +G ++ F GT EY++PE++
Sbjct: 149 --------------PENIM-LNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 261 RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDL 317
GH AVDWW+LG L Y+ML G PF G+NRK+T +L + P ++ Q DL
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEA--RDL 251
Query: 318 IQRLLEKDPVKRLGYLRG-ACEIKEHVFFKGVRW-DLLTDVLRPPFIP-SREENDLTE 372
+++LL+++ RLG G A E++ H FF+ + W +LL + PPF P + E D+++
Sbjct: 252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQ 309
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D + + LK+LG+G+ G VFLV + P + +A+KV+ K+TL + R + E
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDRV--RTKMERD 82
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L+ ++HPF+ KL + +T+ L + + GGDL K+ +F+ ++FYL+E+
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELA 140
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
++HLH++GI YRDLKPENIL+ + GH+ LTDF LS+ +
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI 181
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 8/162 (4%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAL 274
PEN L + +++ +++ D+ +++ SF GT EY++PEVV GH + DWW+
Sbjct: 158 PENIL-LDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSY 216
Query: 275 GILTYEMLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
G+L +EML G+ PF+GK+RKET +L + P+F+ T L++ L +++P RLG
Sbjct: 217 GVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLS--TEAQSLLRALFKRNPANRLG 274
Query: 332 Y-LRGACEIKEHVFFKGVRWD-LLTDVLRPPFIPSREENDLT 371
GA EIK HVF+ + W+ L ++PPF P+ + D T
Sbjct: 275 SGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDT 316
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 88/142 (61%), Gaps = 10/142 (7%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRG--DGHEFAVDWWALGILTYEMLYGTTPFRGKNRK--- 294
D ER+ F GT EY++P++VRG GH+ AVDWW+LG+L YE+L G +PF K
Sbjct: 212 DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
Query: 295 -ETFRNVLMKTPEFVGQRTALT-DLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWD 351
E R +L P + + +AL DLIQRLL KDP KRLG R A EIKEH+FF+ + WD
Sbjct: 272 AEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD 331
Query: 352 LLTDVLRP-PFIPS-REENDLT 371
L P PF P R+E D++
Sbjct: 332 DLAAKKVPAPFKPVIRDELDVS 353
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++N + LK+LG GA G VFLV + T + +A+KV+ K+T+ K + R E +V
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKL-YAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 77 LSRLSH-PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L + PFL L + +T+ L + Y GG+L Q +R F+ ++ Y+ EI+
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL-FTHLSQRER-FTEHEVQIYVGEIV 169
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
A+EHLH +GI YRD+K ENIL+ +GHV LTDF LS+ V
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 83/344 (24%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR-V 76
++ +K++G+GA G V LV +A+ +A+K++ K + + ++ WE R +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKV----YAMKLLSKFEMIKR--SDSAFFWEERDI 128
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
++ + P++ +L + + D++L + Y PGGDL L + +FY +E++
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVL 185
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A++ +H+MG+ +RD+KP+N+L+ + GH+ L DF +
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--------------------- 224
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
++TG+ +A +P +Y+S
Sbjct: 225 --------------------DETGMVHCDTAVGTP---------------------DYIS 243
Query: 257 PEVVR---GDGHEF-AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEF 307
PEV++ GDG+ DWW++G+ +EML G TPF + T+ ++ + PE
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED 303
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWD 351
+LI L V RLG G EIK+H FFK +W+
Sbjct: 304 AEISKHAKNLICAFLTDREV-RLGR-NGVEEIKQHPFFKNDQWN 345
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 134/316 (42%), Gaps = 77/316 (24%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 78
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 136
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------ 172
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
+HA P SRR + GT +Y+
Sbjct: 173 --------------VHA-----------------PSSRR----------TTLCGTLDYLP 191
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NVLMKTPEFVGQRTA 313
PE++ G H+ VD W+LG+L YE L G PF +ET++ V P+FV +
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE--G 249
Query: 314 LTDLIQRLLEKDPVKR 329
DLI RLL+ +P +R
Sbjct: 250 ARDLISRLLKHNPSQR 265
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 63
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 121
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 122 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 182 LEDNDYGRAV 191
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 143 LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 203 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 260
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 261 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 289
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 177 LEDNDYGRAV 186
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 177 LEDNDYGRAV 186
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G +F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 177 LEDNDYGRAV 186
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 177 LEDNDYGRAV 186
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G +F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 120 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 180 LEDNDYGRAV 189
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G +F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 141 LDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 200
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 201 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 258
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 259 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 287
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 7/190 (3%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKA---TGRY-YAMKILRKEVIIAKDEVAHTVT-ESRV 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L + +T + L + + Y GG+L + +RVF+ RFY +EI+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVS 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+LH+ + YRD+K EN+++ + GH+ +TDF L + + A K ++ V
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 197 TENPKRHRRI 206
E+ R +
Sbjct: 177 LEDNDYGRAV 186
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 138 LDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 197
Query: 281 MLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT---ALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ + F +LM+ F RT L+ LL+KDP +RL G A
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 337 CEIKEHVFFKGVRW-DLLTDVLRPPFIPS 364
E+ EH FF + W D++ L PPF P
Sbjct: 256 KEVMEHRFFLSINWQDVVQKKLLPPFKPQ 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 134/316 (42%), Gaps = 77/316 (24%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------------------------ 155
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
+HA P SRR + GT +Y+
Sbjct: 156 --------------VHA-----------------PSSRRTE----------LCGTLDYLP 174
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NVLMKTPEFVGQRTA 313
PE++ G H+ VD W+LG+L YE L G PF +ET++ V P+FV +
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE--G 232
Query: 314 LTDLIQRLLEKDPVKR 329
DLI RLL+ +P +R
Sbjct: 233 ARDLISRLLKHNPSQR 248
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKA---TGRY-YAMKILKKEVIVAKDEVAHTLT-ENRV 204
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L S +T + L + + Y GG+L + +RVFS RFY +EI+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 262
Query: 137 AIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
A+++LH+ + YRDLK EN+++ + GH+ +TDF L + +K A K ++
Sbjct: 263 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 196 VTENPKRHRRI 206
V E+ R +
Sbjct: 323 VLEDNDYGRAV 333
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G +F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 285 LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 344
Query: 281 MLYGTTPFRGKNRKETFRNVLMKT---PEFVGQRTALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ ++ F +LM+ P +G L+ LL+KDP +RL G A
Sbjct: 345 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK--SLLSGLLKKDPKQRLGGGSEDA 402
Query: 337 CEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
EI +H FF G+ W + L PPF P
Sbjct: 403 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 431
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKA---TGRY-YAMKILKKEVIVAKDEVAHTLT-ENRV 201
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L S +T + L + + Y GG+L + +RVFS RFY +EI+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 259
Query: 137 AIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
A+++LH+ + YRDLK EN+++ + GH+ +TDF L + +K A K ++
Sbjct: 260 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 196 VTENPKRHRRI 206
V E+ R +
Sbjct: 320 VLEDNDYGRAV 330
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G +F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 282 LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 341
Query: 281 MLYGTTPFRGKNRKETFRNVLMKT---PEFVGQRTALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ ++ F +LM+ P +G L+ LL+KDP +RL G A
Sbjct: 342 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK--SLLSGLLKKDPKQRLGGGSEDA 399
Query: 337 CEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
EI +H FF G+ W + L PPF P
Sbjct: 400 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 428
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKA---TGRY-YAMKILKKEVIVAKDEVAHTLT-ENRV 62
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L S +T + L + + Y GG+L + +RVFS RFY +EI+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 120
Query: 137 AIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
A+++LH+ + YRDLK EN+++ + GH+ +TDF L + +K A K ++
Sbjct: 121 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 196 VTENPKRHRRI 206
V E+ R +
Sbjct: 181 VLEDNDYGRAV 191
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 143 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 281 MLYGTTPFRGKNRKETFRNVLMKT---PEFVGQRTALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ ++ F +LM+ P +G L+ LL+KDP +RL G A
Sbjct: 203 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK--SLLSGLLKKDPKQRLGGGSEDA 260
Query: 337 CEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
EI +H FF G+ W + L PPF P
Sbjct: 261 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 289
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKA---TGRY-YAMKILKKEVIVAKDEVAHTLT-ENRV 63
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L S +T + L + + Y GG+L + +RVFS RFY +EI+
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 121
Query: 137 AIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
A+++LH+ + YRDLK EN+++ + GH+ +TDF L + +K A K ++
Sbjct: 122 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 196 VTENPKRHRRI 206
V E+ R +
Sbjct: 182 VLEDNDYGRAV 192
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 144 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 281 MLYGTTPFRGKNRKETFRNVLMKT---PEFVGQRTALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ ++ F +LM+ P +G L+ LL+KDP +RL G A
Sbjct: 204 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK--SLLSGLLKKDPKQRLGGGSEDA 261
Query: 337 CEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
EI +H FF G+ W + L PPF P
Sbjct: 262 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 290
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 8/191 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + LK+LGKG G V LV ++A T R +A+K++ K + AK E E RV
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKA---TGRY-YAMKILKKEVIVAKDEVAHTLT-ENRV 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L HPFL L S +T + L + + Y GG+L + +RVFS RFY +EI+
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVS 119
Query: 137 AIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
A+++LH+ + YRDLK EN+++ + GH+ +TDF L + +K A K ++
Sbjct: 120 ALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 196 VTENPKRHRRI 206
V E+ R +
Sbjct: 180 VLEDNDYGRAV 190
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 7/149 (4%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L K +++ ++ +G F GT EY++PEV+ + + AVDWW LG++ YE
Sbjct: 142 LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 201
Query: 281 MLYGTTPFRGKNRKETFRNVLMKT---PEFVGQRTALTDLIQRLLEKDPVKRL-GYLRGA 336
M+ G PF ++ ++ F +LM+ P +G L+ LL+KDP +RL G A
Sbjct: 202 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK--SLLSGLLKKDPKQRLGGGSEDA 259
Query: 337 CEIKEHVFFKGVRWD-LLTDVLRPPFIPS 364
EI +H FF G+ W + L PPF P
Sbjct: 260 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQ 288
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 83
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 141
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 187 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 246
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 247 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 68
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 126
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 172 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 231
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 232 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 284
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 84
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 142
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 248 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 63
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 167 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 226
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 227 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 279
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 61
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 119
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 120 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 157
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 165 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 224
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 225 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 62
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 166 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 225
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 226 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F ++
Sbjct: 190 RANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 250 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 64
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 160
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 168 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 227
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 228 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 84
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 142
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 248 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 250 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 250 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F ++
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL 249
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 250 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 84
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 142
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N+FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 188 RANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 248 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 190 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 249
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 250 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 87
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 145
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 191 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 250
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 251 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 89
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 90 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 147
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 193 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 252
Query: 304 TPEF-VGQRTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 253 EYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 305
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ TV L + A T+R +A+K+++K + +++ R E V+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 91
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 92 SRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 149
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 195 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 254
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 255 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 236 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+++ ++ +++F GT EY++PEV+ ++ VDWW LG + YEMLYG PF +N E
Sbjct: 187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
Query: 296 TFRNVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRW-DLL 353
+ N+L K + T + L++ LL+KD KRLG EIK HVFF + W DL+
Sbjct: 247 MYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLI 306
Query: 354 TDVLRPPFIPSRE-ENDL 370
+ PPF P+ NDL
Sbjct: 307 NKKITPPFNPNVSGPNDL 324
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 6/158 (3%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK++GKG+ G V L +A + +A+KV+ K + K E + +L + H
Sbjct: 43 LKVIGKGSFGKVLLARHKAEE----VFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
PFL L S +T + L + + Y GG+L + Q +R F RFY +EI A+ +LH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 143 NMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
++ I YRDLKPENIL+ GH+ LTDF L + ++ +
Sbjct: 157 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ K KILG+G+ T L + A T+R +A+K+++K + +++ R E V+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELA---TSR-EYAIKILEKRHIIKENKVPYVTR-ERDVM 84
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
SRL HPF KL + + DE L + + Y G+L L+Y + F + RFY +EI+ A
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSA 142
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+LH GI +RDLKPENIL+ + H+ +TDF ++ L
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+N FVGT +YVSPE++ + D WALG + Y+++ G PFR N F+ ++
Sbjct: 188 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL 247
Query: 304 TPEFVGQ-RTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKGVRWDLL 353
+F + DL+++LL D KRLG + G +K H FF+ V W+ L
Sbjct: 248 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 151/352 (42%), Gaps = 76/352 (21%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ + K+LGKG+ G VFL + + FA+K + K + + E E
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQF----FAIKALKKDVVLMDDDVEC-TMVEK 69
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
RVLS LAW P+ L+ +
Sbjct: 70 RVLS-------------------LAWEHPF--------------------------LTHM 84
Query: 135 ICAIEHLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
C + N+ L +++ QS H FDLSR T + + + +F
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCH----KFDLSR----ATFYAAEIILGLQF-- 134
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
+ I+ R L + L K +++ +++ ++N F GT +
Sbjct: 135 -------LHSKGIVYR---DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFV-GQRT 312
Y++PE++ G + +VDWW+ G+L YEML G +PF G++ +E F ++ M P +
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 244
Query: 313 ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLT-DVLRPPFIP 363
DL+ +L ++P KRLG +RG +I++H F+ + W+ L + PPF P
Sbjct: 245 EAKDLLVKLFVREPEKRLG-VRG--DIRQHPLFREINWEELERKEIDPPFRP 293
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 76/352 (21%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ K+LGKG+ G VFL + + FA+K + K + + E E
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQF----FAIKALKKDVVLMDDDVEC-TMVEK 68
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
RVLS LAW P+ L+ +
Sbjct: 69 RVLS-------------------LAWEHPF--------------------------LTHM 83
Query: 135 ICAIEHLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
C + N+ L +++ QS H FDLSR T + + + +F
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCH----KFDLSR----ATFYAAEIILGLQF-- 133
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
+ I+ R L + L K +++ +++ ++N F GT +
Sbjct: 134 -------LHSKGIVYR---DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFV-GQRT 312
Y++PE++ G + +VDWW+ G+L YEML G +PF G++ +E F ++ M P +
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 243
Query: 313 ALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLT-DVLRPPFIP 363
DL+ +L ++P KRLG +RG +I++H F+ + W+ L + PPF P
Sbjct: 244 EAKDLLVKLFVREPEKRLG-VRG--DIRQHPLFREINWEELERKEIDPPFRP 292
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + FA+K++DK + + E E R+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + FA+K++DK + + E E R+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + FA+K++DK + + E E R+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNH----FAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + E E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKEIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF L++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT 195
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + E E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKEIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF L++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT 195
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +I H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 171
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 275 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 334
Query: 361 FIP 363
FIP
Sbjct: 335 FIP 337
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 87
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQI 143
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 187 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 247 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 306
Query: 361 FIP 363
FIP
Sbjct: 307 FIP 309
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ + GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 79
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 135
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 136 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 181
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ + GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 180 RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 239
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 240 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 299
Query: 361 FIP 363
FIP
Sbjct: 300 FIP 302
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + +K LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 87
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 145
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 187 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 247 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 306
Query: 361 FIP 363
FIP
Sbjct: 307 FIP 309
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 150
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +DN + +++LGKG+ G V L + +A+KV+ K + + E E
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDL----YAVKVLKKDVILQDDDVECTMT-EK 74
Query: 75 RVLSRL-SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
R+LS +HPFL +L +T + L + + + GGDL + + Q R F + RFY +E
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAE 132
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
II A+ LH+ GI YRDLK +N+L+ GH L DF + +
Sbjct: 133 IISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L +++ ++ NG + +F GT +Y++PE+++ + AVDWWA+G+L YE
Sbjct: 157 LDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216
Query: 281 MLYGTTPFRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGAC 337
ML G PF +N + F +L + P ++ + T +++ + K+P RLG L
Sbjct: 217 MLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDA--TGILKSFMTKNPTMRLGSLTQGG 274
Query: 338 E--IKEHVFFKGVRWDLLTD-VLRPPFIP---SREE 367
E I H FFK + W L + PPF P SRE+
Sbjct: 275 EHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSRED 310
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHA-RFYAAQIV 151
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHA-RFYAAQIV 151
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGRFXEPHA-RFYAAQIV 152
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 94
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFXEPHA-RFYAAQIV 152
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K +G G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGGD+ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ + DF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K +G G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGGD+ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ + DF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
++ D+ + L+ +GKG+ G V +V + +A+K ++K ++E R E+
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKN----DTKKMYAMKYMNKQKCVERNEV-RNVFKEL 66
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV-FSPSVIRFYLSE 133
+++ L HPFL L S + +E + V GGDL RY V F ++ ++ E
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL---RYHLQQNVHFKEETVKLFICE 123
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
++ A+++L N I +RD+KP+NIL+ + GHV +TDF+++ L ++T
Sbjct: 124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 15/129 (11%)
Query: 247 SFVGTEEYVSPEVV---RGDGHEFAVDWWALGILTYEMLYGTTPFR------GKNRKETF 297
+ GT+ Y++PE+ +G G+ FAVDWW+LG+ YE+L G P+ K TF
Sbjct: 173 TMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
Query: 298 RNVLMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWD-LLTDV 356
++ P Q + L+++LLE +P +R L +++ + + WD +
Sbjct: 233 ETTVVTYPSAWSQE--MVSLLKKLLEPNPDQRFSQL---SDVQNFPYMNDINWDAVFQKR 287
Query: 357 LRPPFIPSR 365
L P FIP++
Sbjct: 288 LIPGFIPNK 296
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L ++ PFL KL S + + L + Y PGG++ ++ R P RFY ++I+
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGRFXEPHA-RFYAAQIV 151
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESG----NHYAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESG----NHYAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L Y+M G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++P ++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D K G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT E ++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN++I Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 17/138 (12%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR--------GKNR 293
G+ ++ F GT Y++PE++RG+ + F+VDWWALG+L +EM+ G +PF +N
Sbjct: 175 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 234
Query: 294 KETFRNVLM----KTPEFVGQRTALTDLIQRLLEKDPVKRLGYL--RGACEIKEHVFFKG 347
++ V++ + P + + A +++ L KDP +RLG L G +I+ H FF+
Sbjct: 235 EDYLFQVILEKQIRIPRSMSVKAA--SVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
Query: 348 VRWDLLTD-VLRPPFIPS 364
V WD++ + PPF P+
Sbjct: 293 VDWDMMEQKQVVPPFKPN 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE 73
SL L + L+++G+G+ V LV + D +A+KVV K ++ + + + E
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRI----YAMKVVKKELVNDDEDIDW-VQTE 70
Query: 74 IRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
V + S HPFL L +T+ L + + Y GGDL + + Q R RFY +
Sbjct: 71 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA 128
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
EI A+ +LH GI YRDLK +N+L+ GH+ LTD+ + +
Sbjct: 129 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 91/158 (57%), Gaps = 9/158 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + + L+ LG G+ G V L+ R R +A+KV+ K + + E E +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRH---NGRY-YAMKVLKKEIVVRLKQVEHTND-ERLM 59
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEII 135
LS ++HPF+ ++ G+ + + + + Y GG+L ++LR Q F V +FY +E+
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVC 116
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
A+E+LH+ I YRDLKPENIL+ ++GH+ +TDF ++
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 250 GTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL---MKTPE 306
GT +Y++PEVV + ++DWW+ GIL YEML G TPF N +T+ +L ++ P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 307 FVGQRTALTDLIQRLLEKDPVKRLGYLRGACE-IKEHVFFKGVRWD-LLTDVLRPPFIPS 364
F + + DL+ RL+ +D +RLG L+ E +K H +FK V W+ LL+ + P+ P
Sbjct: 225 FFNE--DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPP 282
Query: 365 REE 367
++
Sbjct: 283 IQQ 285
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 171
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 247 SFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE 306
+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
Query: 307 FVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPPFIP 363
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + PFIP
Sbjct: 278 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 337
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y GG++ ++ R P RFY ++I+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 152
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K +G G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ + DF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 115
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y GG++ ++ R P RFY ++I+
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 173
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 275 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 334
Query: 361 FIP 363
FIP
Sbjct: 335 FIP 337
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 89
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y GG++ ++ R P RFY ++I+
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 147
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 190
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 189 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 248
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 249 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 308
Query: 361 FIP 363
FIP
Sbjct: 309 FIP 311
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y GG++ ++ R P RFY ++I+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 152
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ F+ RFY ++I
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFYAAQI 150
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 94
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L ++ PFL KL S + + L + Y GG++ ++ R P RFY ++I+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGRFXEPHA-RFYAAQIVL 152
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 13/166 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
LD + +K LG G+ G V LV H + +A+K++DK + + E E R
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNH-----YAMKILDKQKVVKLKQIEHTLN-EKR 93
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSE 133
+L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
I+ E+LH++ + YRDLKPEN+LI Q G++ +TDF ++ + +T
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAP 313
Query: 361 FIP 363
FIP
Sbjct: 314 FIP 316
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD +K LG G+ G V LV + + +A+K++DK + + E E R+
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 81
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
L ++ PFL KL S + + L + Y GG++ + R+ FS RFY ++I
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQI 137
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI + G++ +TDF ++ + +T
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT 182
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 181 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 240
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 241 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 300
Query: 361 FIP 363
FIP
Sbjct: 301 FIP 303
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 11/165 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LD + ++ LG G+ G V LV + +A+K++DK + + E E R+
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNH----YAMKILDKQKVVKLKQIEHTLN-EKRI 95
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV--FSPSVIRFYLSEI 134
++ PFL KL S + + L + Y PGG++ + R+ FS RFY ++I
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFYAAQI 151
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ E+LH++ + YRDLKPEN+LI Q G++ + DF ++ + +T
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 196
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R+ GT EY++PE++ G+ AVDWWALG+L YEM G PF + + ++
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
Query: 304 TPEFVGQRTA-LTDLIQRLLEKDPVKRLGYLR-GACEIKEHVFFKGVRW-DLLTDVLRPP 360
F ++ L DL++ LL+ D KR G L+ G +IK H +F W + + P
Sbjct: 255 KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAP 314
Query: 361 FIP 363
FIP
Sbjct: 315 FIP 317
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 80/138 (57%), Gaps = 17/138 (12%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR--------GKNR 293
G+ +++F GT Y++PE++RG+ + F+VDWWALG+L +EM+ G +PF +N
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 294 KETFRNVLM----KTPEFVGQRTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKG 347
++ V++ + P + + A +++ L KDP +RLG G +I+ H FF+
Sbjct: 267 EDYLFQVILEKQIRIPRSLSVKAA--SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
Query: 348 VRWDLLTD-VLRPPFIPS 364
V WD++ + PPF P+
Sbjct: 325 VDWDMMEQKQVVPPFKPN 342
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE 73
SL L + L+++G+G+ V LV + D +A++VV K ++ + + + E
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRI----YAMRVVKKELVNDDEDIDW-VQTE 102
Query: 74 IRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
V + S HPFL L +T+ L + + Y GGDL + + Q R RFY +
Sbjct: 103 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA 160
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
EI A+ +LH GI YRDLK +N+L+ GH+ LTD+ + +
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR--------GKNR 293
G+ ++ F GT Y++PE++RG+ + F+VDWWALG+L +EM+ G +PF +N
Sbjct: 160 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 219
Query: 294 KETFRNVLM----KTPEFVGQRTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKG 347
++ V++ + P + + A +++ L KDP +RLG G +I+ H FF+
Sbjct: 220 EDYLFQVILEKQIRIPRSLSVKAA--SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
Query: 348 VRWDLLTD-VLRPPFIPS 364
V WD++ + PPF P+
Sbjct: 278 VDWDMMEQKQVVPPFKPN 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE 73
SL L + L+++G+G+ V LV + D +A+KVV K ++ + + + E
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRI----YAMKVVKKELVNDDEDIDW-VQTE 55
Query: 74 IRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
V + S HPFL L +T+ L + + Y GGDL + + Q R RFY +
Sbjct: 56 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA 113
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
EI A+ +LH GI YRDLK +N+L+ GH+ LTD+ + +
Sbjct: 114 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 17/138 (12%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR--------GKNR 293
G+ ++ F GT Y++PE++RG+ + F+VDWWALG+L +EM+ G +PF +N
Sbjct: 164 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Query: 294 KETFRNVLM----KTPEFVGQRTALTDLIQRLLEKDPVKRLGY--LRGACEIKEHVFFKG 347
++ V++ + P + + A +++ L KDP +RLG G +I+ H FF+
Sbjct: 224 EDYLFQVILEKQIRIPRSLSVKAA--SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
Query: 348 VRWDLLTD-VLRPPFIPS 364
V WD++ + PPF P+
Sbjct: 282 VDWDMMEQKQVVPPFKPN 299
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L L + L+++G+G+ V LV + D +A+KVV K ++ + + + E
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRI----YAMKVVKKELVNDDEDIDW-VQTEK 60
Query: 75 RVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
V + S HPFL L +T+ L + + Y GGDL + + Q R RFY +E
Sbjct: 61 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAE 118
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I A+ +LH GI YRDLK +N+L+ GH+ LTD+ + +
Sbjct: 119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ +I+G+G G V+ R AD +A+K +DK + K + E A E
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGC--RKADTGKM--YAMKCLDKKRIKMK-QGETLALNER 239
Query: 75 RVLSRLSH---PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
+LS +S PF+ + + T + L++ + GGDL+ + VFS + +RFY
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADMRFYA 297
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
+EII +EH+HN + YRDLKP NIL+ + GHV ++D L+ + KK
Sbjct: 298 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 243 ERSNSFVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFR---GKNRKETFR 298
++ ++ VGT Y++PEV+ +G ++ + DW++LG + +++L G +PFR K++ E R
Sbjct: 344 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 403
Query: 299 NVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWDLL-TD 355
L E + L L++ LL++D +RLG L RGA E+KE FF+ + W ++
Sbjct: 404 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 463
Query: 356 VLRPPFIPSREE 367
PP IP R E
Sbjct: 464 KYPPPLIPPRGE 475
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ +I+G+G G V+ R AD +A+K +DK + K + E A E
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGC--RKADTGKM--YAMKCLDKKRIKMK-QGETLALNER 240
Query: 75 RVLSRLSH---PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
+LS +S PF+ + + T + L++ + GGDL+ + VFS + +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADMRFYA 298
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
+EII +EH+HN + YRDLKP NIL+ + GHV ++D L+ + KK
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 243 ERSNSFVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRG---KNRKETFR 298
++ ++ VGT Y++PEV+ +G ++ + DW++LG + +++L G +PFR K++ E R
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
Query: 299 NVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWDLL-TD 355
L E + L L++ LL++D +RLG L RGA E+KE FF+ + W ++
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 356 VLRPPFIPSREE 367
PP IP R E
Sbjct: 465 KYPPPLIPPRGE 476
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ +I+G+G G V+ R AD +A+K +DK + K + E A E
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGC--RKADTGKM--YAMKCLDKKRIKMK-QGETLALNER 240
Query: 75 RVLSRLSH---PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
+LS +S PF+ + + T + L++ + GGDL+ + VFS + +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADMRFYA 298
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
+EII +EH+HN + YRDLKP NIL+ + GHV ++D L+ + KK
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 243 ERSNSFVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFR---GKNRKETFR 298
++ ++ VGT Y++PEV+ +G ++ + DW++LG + +++L G +PFR K++ E R
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
Query: 299 NVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWDLL-TD 355
L E + L L++ LL++D +RLG L RGA E+KE FF+ + W ++
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 356 VLRPPFIPSREE 367
PP IP R E
Sbjct: 465 KYPPPLIPPRGE 476
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L +++ +I+G+G G V+ R AD +A+K +DK + K + E A E
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGC--RKADTGKM--YAMKCLDKKRIKMK-QGETLALNER 240
Query: 75 RVLSRLSH---PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
+LS +S PF+ + + T + L++ + GGDL+ + VFS + +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHY--HLSQHGVFSEADMRFYA 298
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
+EII +EH+HN + YRDLKP NIL+ + GHV ++D L+ + KK
Sbjct: 299 AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
Query: 243 ERSNSFVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFR---GKNRKETFR 298
++ ++ VGT Y++PEV+ +G ++ + DW++LG + +++L G +PFR K++ E R
Sbjct: 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 404
Query: 299 NVLMKTPEFVGQRT-ALTDLIQRLLEKDPVKRLGYL-RGACEIKEHVFFKGVRWDLL-TD 355
L E + L L++ LL++D +RLG L RGA E+KE FF+ + W ++
Sbjct: 405 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQ 464
Query: 356 VLRPPFIPSREE 367
PP IP R E
Sbjct: 465 KYPPPLIPPRGE 476
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRK---ETFR 298
G+ VGT Y++PEVV+ + + F+ DWWALG L YEM+ G +PF+ + +K E
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 299 NVLMKTPEFVGQRTA--LTDLIQRLLEKDPVKRLGYLRGAC-EIKEHVFFKGVRWDLL-T 354
++ + PE +R + L +LL KDP +RLG G+ E+KEH FK + + L
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458
Query: 355 DVLRPPFIP 363
+L PPF P
Sbjct: 459 GMLEPPFKP 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+ + ++LGKG G V RA C + K + E A E ++L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYAC-----KKLEKKRIKKRKGEAMALNEKQIL 238
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+++ F+ L + ET + L + GGDL Y F + FY +EI C
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+E LH I YRDLKPENIL+ GH+ ++D L+
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRK---ETFR 298
G+ VGT Y++PEVV+ + + F+ DWWALG L YEM+ G +PF+ + +K E
Sbjct: 339 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
Query: 299 NVLMKTPEFVGQRTA--LTDLIQRLLEKDPVKRLGYLRGAC-EIKEHVFFKGVRWDLL-T 354
++ + PE +R + L +LL KDP +RLG G+ E+KEH FK + + L
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458
Query: 355 DVLRPPFIP 363
+L PPF P
Sbjct: 459 GMLEPPFKP 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+ + ++LGKG G V RA C + K + E A E ++L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYAC-----KKLEKKRIKKRKGEAMALNEKQIL 238
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+++ F+ L + ET + L + GGDL Y F + FY +EI C
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+E LH I YRDLKPENIL+ GH+ ++D L+
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+G + F GT +Y++PE++ + +VDWWA G+L YEML G PF G++ E F+++
Sbjct: 495 DGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWDLLT-D 355
+ + P+ + + + + L+ K P KRLG G +IKEH FF+ + W+ L
Sbjct: 555 MEHNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERK 612
Query: 356 VLRPPFIP 363
++PP+ P
Sbjct: 613 EIQPPYKP 620
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+ L + L +LGKG+ G V L + D +A+K++ K + + E E
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDEL----YAVKILKKDVVIQDDDVEC-TMVEK 392
Query: 75 RVLSRLSHP-FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
RVL+ P FL +L +T + L + + Y GGDL + +Q R P + FY +E
Sbjct: 393 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAE 450
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I + L + GI YRDLK +N+++ GH+ + DF + +
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+G + F GT +Y++PE++ + +VDWWA G+L YEML G PF G++ E F+++
Sbjct: 173 DGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHVFFKGVRWDLLTD- 355
+ + P+ + + + + L+ K P KRLG G +++EH FF+ + W+ L +
Sbjct: 233 MEHNVSYPKSLSKEA--VSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENR 290
Query: 356 VLRPPFIP 363
++PPF P
Sbjct: 291 EIQPPFKP 298
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 8/158 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + L +LGKG+ G V L + + +A+K++ K + + E E RV
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEEL----YAIKILKKDVVIQDDDVEC-TMVEKRV 72
Query: 77 LSRLSHP-FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L+ L P FL +L +T + L + + Y GGDL + +Q + P + FY +EI
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGKFKEPQAV-FYAAEIS 130
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ LH GI YRDLK +N+++ GH+ + DF + +
Sbjct: 131 IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 228 RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP 287
+++ +++ +G + F GT +Y++PE++ + +VDWWA G+L YEML G P
Sbjct: 161 KIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
Query: 288 FRGKNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLGY-LRGACEIKEHV 343
F G++ E F++++ + P+ + + + + L+ K P KRLG G +IKEH
Sbjct: 221 FEGEDEDELFQSIMEHNVAYPKSMSKEAVA--ICKGLMTKHPGKRLGCGPEGERDIKEHA 278
Query: 344 FFKGVRWDLLT-DVLRPPFIP 363
FF+ + W+ L ++PP+ P
Sbjct: 279 FFRYIDWEKLERKEIQPPYKP 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+ L + L +LGKG+ G V L + D +A+K++ K + + E E
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDEL----YAVKILKKDVVIQDDDVEC-TMVEK 71
Query: 75 RVLSRLSHP-FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
RVL+ P FL +L +T + L + + Y GGDL + +Q R P + FY +E
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRFKEPHAV-FYAAE 129
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I + L + GI YRDLK +N+++ GH+ + DF + +
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 6/152 (3%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ + LK++G+GA G V +V + AD FA+K+++K + + E R E VL
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKV----FAMKILNKWEMLKRAETAC-FREERDVL 128
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
++ L + + D L + Y GGDL L K DR+ + RFYL+E++ A
Sbjct: 129 VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMARFYLAEMVIA 187
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
I+ +H + +RD+KP+NIL+ +GH+ L DF
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 14/135 (10%)
Query: 240 DNGERSNSFVGTEEYVSPEVVR----GDG-HEFAVDWWALGILTYEMLYGTTPFRGKNRK 294
D +S+ VGT +Y+SPE+++ G G + DWW+LG+ YEMLYG TPF ++
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 295 ETFRNVLMKTP--EFVGQRTALT----DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGV 348
ET+ ++ +F Q T ++ DLI+RL+ RLG G + K+H FF G+
Sbjct: 288 ETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSRE-HRLGQ-NGIEDFKKHPFFSGI 345
Query: 349 RWDLLTDVLRPPFIP 363
WD + + P+IP
Sbjct: 346 DWDNIRNC-EAPYIP 359
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 76/317 (23%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + +K LG+G+ G V L A T ALK+++K L AK + + R EI
Sbjct: 12 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISY 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L L HP + KL +++ + + + Y + + Q D++ RF+ +II
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFF-QQIIS 123
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+ H I +RDLKPEN+L+ + +V + DF LS N++ F K S + +
Sbjct: 124 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNY----- 177
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
A PE +G + Y
Sbjct: 178 ----------------AAPEVISG-------------------------------KLYAG 190
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV---LMKTPEFVGQRTA 313
PE VD W+ G++ Y ML PF ++ F+N+ + P+F+ A
Sbjct: 191 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 240
Query: 314 LTDLIQRLLEKDPVKRL 330
LI+R+L +P+ R+
Sbjct: 241 --GLIKRMLIVNPLNRI 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 76/317 (23%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + +K LG+G+ G V L A T ALK+++K L AK + + R EI
Sbjct: 13 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISY 67
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L L HP + KL +++ + + + Y + + Q D++ RF+ +II
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFF-QQIIS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+ H I +RDLKPEN+L+ + +V + DF LS N++ F K S + +
Sbjct: 125 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNY----- 178
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
A PE +G + Y
Sbjct: 179 ----------------AAPEVISG-------------------------------KLYAG 191
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV---LMKTPEFVGQRTA 313
PE VD W+ G++ Y ML PF ++ F+N+ + P+F+ A
Sbjct: 192 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 241
Query: 314 LTDLIQRLLEKDPVKRL 330
LI+R+L +P+ R+
Sbjct: 242 --GLIKRMLIVNPLNRI 256
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 76/317 (23%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + +K LG+G+ G V L A T ALK+++K L AK + + R EI
Sbjct: 7 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISY 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L L HP + KL +++ + + + Y + + Q D++ RF+ +II
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFF-QQIIS 118
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+ H I +RDLKPEN+L+ + +V + DF LS N++ F K S + +
Sbjct: 119 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNY----- 172
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
A PE +G + Y
Sbjct: 173 ----------------AAPEVISG-------------------------------KLYAG 185
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV---LMKTPEFVGQRTA 313
PE VD W+ G++ Y ML PF ++ F+N+ + P+F+ A
Sbjct: 186 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 235
Query: 314 LTDLIQRLLEKDPVKRL 330
LI+R+L +P+ R+
Sbjct: 236 --GLIKRMLIVNPLNRI 250
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 133/317 (41%), Gaps = 76/317 (23%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + +K LG+G+ G V L A T ALK+++K L AK + + R EI
Sbjct: 3 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVL-AKSDMQGRIEREISY 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L L HP + KL +++ + + + Y + + Q D++ RF+ +II
Sbjct: 58 LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFF-QQIIS 114
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
A+E+ H I +RDLKPEN+L+ + +V + DF LS N++ F K S + +
Sbjct: 115 AVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKTSCGSPNY----- 168
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
A PE +G + Y
Sbjct: 169 ----------------AAPEVISG-------------------------------KLYAG 181
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV---LMKTPEFVGQRTA 313
PE VD W+ G++ Y ML PF ++ F+N+ + P+F+ A
Sbjct: 182 PE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAA 231
Query: 314 LTDLIQRLLEKDPVKRL 330
LI+R+L +P+ R+
Sbjct: 232 --GLIKRMLIVNPLNRI 246
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFA-------VDWWALGILTYEMLYGTTPFRGKN 292
D RS VGT +Y+SPE+++ G DWWALG+ YEM YG TPF +
Sbjct: 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274
Query: 293 RKETFRNVLMKTPEFV------GQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
ET+ ++ G D IQRLL P RLG GA + + H FF
Sbjct: 275 TAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGR-GGAGDFRTHPFFF 332
Query: 347 GVRWDLLTDVLRPPFIPSREEN------DLTEKAM----SGGG---VDIRE 384
G+ WD L D + PPF P E DL E + SGGG DIRE
Sbjct: 333 GLDWDGLRDSV-PPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIRE 382
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L D+ + LK++G+GA V +V + +A+K+++K + + E R E
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQV----YAMKIMNKWDMLKRGEVSC-FREER 112
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
VL ++ +L + + + +L + Y GGDL L K +R+ + RFYL+EI
Sbjct: 113 DVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI-PAEMARFYLAEI 171
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
+ AI+ +H +G +RD+KP+NIL+ + GH+ L DF
Sbjct: 172 VMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADF 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 127/316 (40%), Gaps = 85/316 (26%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LGKG+ G V DR + +A+KV++K++ AK++ E+ +L +L HP
Sbjct: 29 MLGKGSFGEVLKCKDR----ITQQEYAVKVINKAS--AKNKDTSTILREVELLKKLDHPN 82
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ KL LE GG+L +++ K+ FS + ++ I ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 143 NMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
I +RDLKPENIL+ + + + DF LS T F+ +N
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------TCFQ---------------QN 177
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
K RI T + Y++PEV
Sbjct: 178 TKMKDRIGTAY-------------------------------------------YIAPEV 194
Query: 260 VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTAL 314
+RG E D W+ G++ Y +L GT PF GKN + + V P++
Sbjct: 195 LRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 315 TDLIQRLLEKDPVKRL 330
DLI+++L P R+
Sbjct: 254 KDLIRKMLTFHPSLRI 269
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 126/316 (39%), Gaps = 85/316 (26%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LGKG+ G V DR +A+KV++K++ AK++ E+ +L +L HP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQ----EYAVKVINKAS--AKNKDTSTILREVELLKKLDHPN 82
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ KL LE GG+L +++ K+ FS + ++ I ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 143 NMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
I +RDLKPENIL+ + + + DF LS T F+ +N
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------TCFQ---------------QN 177
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
K RI T + Y++PEV
Sbjct: 178 TKMKDRIGTAY-------------------------------------------YIAPEV 194
Query: 260 VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTAL 314
+RG E D W+ G++ Y +L GT PF GKN + + V P++
Sbjct: 195 LRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 315 TDLIQRLLEKDPVKRL 330
DLI+++L P R+
Sbjct: 254 KDLIRKMLTFHPSLRI 269
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 126/316 (39%), Gaps = 85/316 (26%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LGKG+ G V DR +A+KV++K++ AK++ E+ +L +L HP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQ----EYAVKVINKAS--AKNKDTSTILREVELLKKLDHPN 82
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ KL LE GG+L +++ K+ FS + ++ I ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 143 NMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
I +RDLKPENIL+ + + + DF LS T F+ +N
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS------TCFQ---------------QN 177
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
K RI T + Y++PEV
Sbjct: 178 TKMKDRIGTAY-------------------------------------------YIAPEV 194
Query: 260 VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTAL 314
+RG E D W+ G++ Y +L GT PF GKN + + V P++
Sbjct: 195 LRGTYDE-KCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 315 TDLIQRLLEKDPVKRL 330
DLI+++L P R+
Sbjct: 254 KDLIRKMLTFHPSLRI 269
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 121/308 (39%), Gaps = 76/308 (24%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G+ G V L A + ALK + + L K + R EI L L HP +
Sbjct: 17 LGEGSFGKVKL----ATHYKTQQKVALKFISRQLL-KKSDMHMRVEREISYLKLLRHPHI 71
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
KL + T + + Y GG+L Y + + R + +IICAIE+ H
Sbjct: 72 IKLYDVITTPTDIVMVIEYA-GGEL--FDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRR 205
I +RDLKPEN+L+ + +V + DF LS N++ F K S + +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSCGSPNY-------------- 173
Query: 206 ILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGH 265
A PE G + Y PE
Sbjct: 174 -------AAPEVING-------------------------------KLYAGPE------- 188
Query: 266 EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV---LMKTPEFVGQRTALTDLIQRLL 322
VD W+ GI+ Y ML G PF + F+ V + P+F+ LI+R++
Sbjct: 189 ---VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLS--PGAQSLIRRMI 243
Query: 323 EKDPVKRL 330
DP++R+
Sbjct: 244 VADPMQRI 251
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 120/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA--RWEIRVLSRLSHP 83
LG G VF V + + + +A K + K + R E+ +L + HP
Sbjct: 19 LGSG----VFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 71/284 (25%)
Query: 51 ALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL 110
A+K++DK+TL + R + EI L L H + +L LET + + YCPGG+L
Sbjct: 39 AIKIMDKNTLGSDLP---RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL 95
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFD 170
Y + S R +I+ A+ ++H+ G A+RDLKPEN+L + + L DF
Sbjct: 96 --FDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFG 153
Query: 171 LSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVS 230
L + Q+ + +A PE G
Sbjct: 154 LCAKPKGNKDYHLQTCCGS--------------------LAYAAPELIQG---------- 183
Query: 231 PVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG 290
S++G+E D W++GIL Y ++ G PF
Sbjct: 184 ---------------KSYLGSE----------------ADVWSMGILLYVLMCGFLPFDD 212
Query: 291 KNRKETFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
N ++ ++ P+++ + L L+Q++L+ DP KR+
Sbjct: 213 DNVMALYKKIMRGKYDVPKWLSPSSIL--LLQQMLQVDPKKRIS 254
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRG--DG---HEFAVDWWALGILTYEMLYGTTPFRGKNRK 294
D +S+ VGT +Y+SPE+++ DG + DWW+LG+ YEMLYG TPF ++
Sbjct: 244 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
Query: 295 ETFRNVLMKTP--EFVGQRTALT----DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGV 348
ET+ ++ +F T ++ DLIQRL+ +RLG G + K+H FF+G+
Sbjct: 304 ETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRE-RRLGQ-NGIEDFKKHAFFEGL 361
Query: 349 RWDLLTDVLRPPFIP 363
W+ + + L P+IP
Sbjct: 362 NWENIRN-LEAPYIP 375
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ + +K++G+GA G V +V + + +A+K+++K + + E R E VL
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERI----YAMKILNKWEMLKRAET-ACFREERDVL 144
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
++ L + + + L + Y GGDL L K D++ + RFY+ E++ A
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLA 203
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
I+ +H + +RD+KP+N+L+ +GH+ L DF
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 125/313 (39%), Gaps = 75/313 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ + +L +I+ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLH 131
Query: 143 NMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKR 202
++ IA+ DLKPENI++ L RN+ PK
Sbjct: 132 SLQIAHFDLKPENIML------------LDRNV------------------------PKP 155
Query: 203 HRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRG 262
+I+ L D G + GT E+V+PE+V
Sbjct: 156 RIKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 263 DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DL 317
+ D W++G++TY +L G +PF G ++ET NV EF +AL D
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDF 251
Query: 318 IQRLLEKDPVKRL 330
I+RLL KDP KR+
Sbjct: 252 IRRLLVKDPKKRM 264
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRG--DG---HEFAVDWWALGILTYEMLYGTTPFRGKNRK 294
D +S+ VGT +Y+SPE+++ DG + DWW+LG+ YEMLYG TPF ++
Sbjct: 228 DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
Query: 295 ETFRNVLMKTP--EFVGQRTALT----DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGV 348
ET+ ++ +F T ++ DLIQRL+ +RLG G + K+H FF+G+
Sbjct: 288 ETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRE-RRLGQ-NGIEDFKKHAFFEGL 345
Query: 349 RWDLLTDVLRPPFIP 363
W+ + + L P+IP
Sbjct: 346 NWENIRN-LEAPYIP 359
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++ + +K++G+GA G V +V + + +A+K+++K + + E R E VL
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERI----YAMKILNKWEMLKRAET-ACFREERDVL 128
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
++ L + + + L + Y GGDL L K D++ + RFY+ E++ A
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLA 187
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
I+ +H + +RD+KP+N+L+ +GH+ L DF
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 73
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 132 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 155
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 156 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 251
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 252 RRLLVKDPKKRM 263
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 131/351 (37%), Gaps = 90/351 (25%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D + +K +G G G L+ D+ A+ A+K +++ + + + EI
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELV----AVKYIERG-----EKIDENVKREII 67
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L HP + + + T LA + Y GG+L N FS RF+ ++I
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLI 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQS--GHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + H M +A+RDLK EN L+ S + + DF S+ V
Sbjct: 126 SGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV----------------- 168
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
LH+ P++ G T
Sbjct: 169 -----------------LHSQPKSAVG------------------------------TPA 181
Query: 254 YVSPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFR-------NVLMKTP 305
Y++PEV+ ++ V D W+ G+ Y ML G PF + FR NV P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 306 EFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
++V LI R+ DP KR+ EI+ H F K + DL+ D
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRISI----PEIRNHEWFLKNLPADLMND 288
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 73
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 132 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 155
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 156 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 251
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 252 RRLLVKDPKKRM 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 120/312 (38%), Gaps = 73/312 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ IA+ DLKPENI++ L RN+ PK
Sbjct: 133 LQIAHFDLKPENIML------------LDRNV------------------------PKPR 156
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L D G + GT E+V+PE+V +
Sbjct: 157 IKIIDFGL------------------------AHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF----VGQRTALT-DLI 318
D W++G++TY +L G +PF G ++ET NV EF +AL D I
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 252
Query: 319 QRLLEKDPVKRL 330
+RLL KDP KR+
Sbjct: 253 RRLLVKDPKKRM 264
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 131/351 (37%), Gaps = 90/351 (25%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D + +K +G G G L+ D+ ++ A+K +++ + + + EI
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELV----AVKYIERG-----EKIDENVKREII 66
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L HP + + + T LA + Y GG+L N FS RF+ ++I
Sbjct: 67 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLI 124
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQS--GHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + H M + +RDLK EN L+ S + + DF S++ V
Sbjct: 125 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV----------------- 167
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
LH+ P++ G T
Sbjct: 168 -----------------LHSQPKSTVG------------------------------TPA 180
Query: 254 YVSPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFR-------NVLMKTP 305
Y++PEV+ ++ V D W+ G+ Y ML G PF + FR NV P
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 240
Query: 306 EFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
++V LI R+ DP KR+ EI+ H F K + DL+ D
Sbjct: 241 DYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWFLKNLPADLMND 287
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 131/351 (37%), Gaps = 90/351 (25%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D + +K +G G G L+ D+ ++ A+K +++ A + + EI
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELV----AVKYIERGEKIAAN-----VKREII 67
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L HP + + + T LA + Y GG+L N FS RF+ ++I
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLI 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQS--GHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + H M + +RDLK EN L+ S + + DF S++ V
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSV----------------- 168
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
LH+ P++ G T
Sbjct: 169 -----------------LHSQPKSTVG------------------------------TPA 181
Query: 254 YVSPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFR-------NVLMKTP 305
Y++PEV+ ++ V D W+ G+ Y ML G PF + FR NV P
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 306 EFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
++V LI R+ DP KR+ EI+ H F K + DL+ D
Sbjct: 242 DYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWFLKNLPADLMND 288
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ K +LGKG+ V+ RA A+K++DK ++ K +R + E+++
Sbjct: 10 IEDFKVGNLLGKGSFAGVY----RAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQND-RVFSPSVIRFYLSEII 135
+L HP + +L E ++ + C G++N RY +N + FS + R ++ +II
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMN--RYLKNRVKPFSENEARHFMHQII 122
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +LH+ GI +RDL N+L+ ++ ++ + DF L+ L
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 193 VLPVTENPKRH--RRILT--RWLHA-------LPENKTGLKKTKSARVSPVSRRQQSFDN 241
V P +EN RH +I+T +LH+ L + L + + +++ Q
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
E+ + GT Y+SPE+ H D W+LG + Y +L G PF K T V+
Sbjct: 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV 225
Query: 302 M---KTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+ + P F+ DLI +LL ++P RL
Sbjct: 226 LADYEMPSFLSIEAK--DLIHQLLRRNPADRL 255
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 129/349 (36%), Gaps = 86/349 (24%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D + +K +G G G L+ D+ ++ A+K +++ + + + EI
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELV----AVKYIERG-----EKIDENVKREII 67
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L HP + + + T LA + Y GG+L N FS RF+ ++I
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLI 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
+ + H M + +RDLK EN L+ S L + + K S+
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK--------ICAFGYSKSSV--------- 168
Query: 196 VTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYV 255
LH+ P++ G T Y+
Sbjct: 169 ---------------LHSQPKDTVG------------------------------TPAYI 183
Query: 256 SPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFR-------NVLMKTPEF 307
+PEV+ ++ V D W+ G+ Y ML G PF + FR NV P++
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY 243
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
V LI R+ DP KR+ EI+ H F K + DL+ D
Sbjct: 244 VHISPECRHLISRIFVADPAKRI----SIPEIRNHEWFLKNLPADLMND 288
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 129/349 (36%), Gaps = 86/349 (24%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D + +K +G G G L+ D+ ++ A+K +++ + + + EI
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELV----AVKYIERG-----EKIDENVKREII 67
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L HP + + + T LA + Y GG+L N FS RF+ ++I
Sbjct: 68 NHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLI 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
+ + H M + +RDLK EN L+ S L + + K S+
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLK--------ICAFGYSKSSV--------- 168
Query: 196 VTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYV 255
LH+ P++ G T Y+
Sbjct: 169 ---------------LHSQPKSTVG------------------------------TPAYI 183
Query: 256 SPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFR-------NVLMKTPEF 307
+PEV+ ++ V D W+ G+ Y ML G PF + FR NV P++
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDY 243
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
V LI R+ DP KR+ EI+ H F K + DL+ D
Sbjct: 244 VHISPECRHLISRIFVADPAKRI----SIPEIRNHEWFLKNLPADLMND 288
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L+ +G+G+ G LV + +K ++ S + +K E +R E+ VL+ + H
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQ----YVIKEINISRMSSKEREE--SRREVAVLANMKH 82
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
P + + S E + L + YC GGDL Q +F I + +I A++H+H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 143 NMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ I +RD+K +NI + + G V L DF ++R L
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM 302
E + + +GT Y+SPE+ + D WALG + YE+ F + K ++
Sbjct: 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
Query: 303 KT--PEFVGQRTALTDLIQRLLEKDPVKR 329
+ P + L L+ +L +++P R
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 80/332 (24%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
+ + + +LG+GA G V +A + +A+K + +H E+ + E+ +
Sbjct: 7 DFEEIAVLGQGAFGQVV----KARNALDSRYYAIKKI-------RHTEEKLSTILSEVML 55
Query: 77 LSRLSHPFLPKLLGS-LETDEF------------LAWAVPYCPGGDLNVLRYKQNDRVFS 123
L+ L+H ++ + + LE F L + YC G L L + +N
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
R + +I+ A+ ++H+ GI +RDLKP NI I +S +V + DF L++N+ + K
Sbjct: 116 DEYWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 184 QSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGE 243
N LP + L
Sbjct: 175 LDSQN-------------------------LPGSSDNL---------------------- 187
Query: 244 RSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYG-TTPFRGKNRKETFRNVL 301
S +GT YV+ EV+ G GH +D ++LGI+ +EM+Y +T N + R+V
Sbjct: 188 --TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS 245
Query: 302 MK-TPEFVGQRTALTDLIQRLL-EKDPVKRLG 331
++ P+F + + I RLL + DP KR G
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKNSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF ++T++ V
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D K ++LGKG+ G V L D+ A+KV+ K + K + E R E+++L
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQEC----AVKVISKRQVKQKTDKESLLR-EVQLL 86
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEII 135
+L HP + KL E + GG+L ++ K+ V + +IR +++
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVL 142
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLSRNL 175
I ++H I +RDLKPEN+L+ + ++ + DF LS +
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 185
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQS-FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K+K A + + + F+ ++ +GT Y++PEV+ G E D W+
Sbjct: 160 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCDVWS 218
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF G N + + V + P++ + DLI+++L P
Sbjct: 219 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 329 RL 330
R+
Sbjct: 279 RI 280
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 52/335 (15%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS- 81
+K LGKGA G V+ DR ST +A+R R EI +L+ LS
Sbjct: 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST-----DAQRTFR-EIMILTELSG 67
Query: 82 HPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
H + LL L + D + Y V+R + P ++ + ++I I+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN----ILEPVHKQYVVYQLIKVIK 123
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH+ G+ +RD+KP NIL+ HV + DF LSR+ V ++ NN + TEN
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI----RRVTNNIPLSINENTEN 179
Query: 200 PKRHRRIL-----TRWLHALPENKTG-LKKTKSARV-------------SPVSRRQQSFD 240
+ IL TRW A PE G K TK + P+ + +
Sbjct: 180 FDDDQPILTDYVATRWYRA-PEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETF--- 297
ER +G ++ S E V FA E L R N+++ F
Sbjct: 239 QLER---IIGVIDFPSNEDVESIQSPFAK-------TMIESLKEKVEIRQSNKRDIFTKW 288
Query: 298 RNVLMK-TPEFVGQRTALTDLIQRLLEKDPVKRLG 331
+N+L+K P+ AL DL+ +LL+ +P KR+
Sbjct: 289 KNLLLKINPKADCNEEAL-DLLDKLLQFNPNKRIS 322
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER + GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 174 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 234 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 263
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + D AD + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 29 LGKGGFAKCFEISD--AD--TKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 83
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 84 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 141
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G+ V + Q F Y++E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELAN 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 167 RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 227 EFTFPDFVTE--GARDLISRLLKHNPSQR 253
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 62
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 120
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 163 RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 223 EFTFPDFVTE--GARDLISRLLKHNPSQR 249
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER + GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 170 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 230 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 259
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + D AD + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 25 LGKGGFAKCFEISD--AD--TKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER + GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 170 DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 230 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 259
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + D AD + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 25 LGKGGFAKCFEISD--AD--TKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 80 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 137
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L ++ ++ ALKV+ K+ L K E + R E+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREK----QSKFILALKVLFKAQLE-KAGVEHQLRREVEI 87
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 145
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 188 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 248 EFTFPDFVTE--GARDLISRLLKHNPSQR 274
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L ++ ++ ALKV+ K+ L K E + R E+ +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREK----QSKFILALKVLFKAQLE-KAGVEHQLRREVEI 87
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 145
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 181
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 188 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 248 EFTFPDFVTE--GARDLISRLLKHNPSQR 274
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE + G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 167 RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 227 EFTFPDFVTE--GARDLISRLLKHNPSQR 253
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D K ++LGKG+ G V L D+ C A+KV+ K + K + E R E+++L
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQ--EC--AVKVISKRQVKQKTDKESLLR-EVQLL 104
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEII 135
+L HP + KL E + GG+L ++ K+ V + +IR +++
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVL 160
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I ++H I +RDLKPEN+L+ + ++ + DF LS
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQS-FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K+K A + + + F+ ++ +GT Y++PEV+ G E D W+
Sbjct: 178 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCDVWS 236
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF G N + + V + P++ + DLI+++L P
Sbjct: 237 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 329 RL 330
R+
Sbjct: 297 RI 298
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 227 EFTFPDFVTE--GARDLISRLLKHNPSQR 253
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D K ++LGKG+ G V L D+ C A+KV+ K + K + E R E+++L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKIT--GQEC--AVKVISKRQVKQKTDKESLLR-EVQLL 80
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEII 135
+L HP + KL E + GG+L ++ K+ V + +IR +++
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVL 136
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I ++H I +RDLKPEN+L+ + ++ + DF LS
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQS-FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K+K A + + + F+ ++ +GT Y++PEV+ G E D W+
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCDVWS 212
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF G N + + V + P++ + DLI+++L P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 329 RL 330
R+
Sbjct: 273 RI 274
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D K ++LGKG+ G V L D+ C A+KV+ K + K + E R E+++L
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQ--EC--AVKVISKRQVKQKTDKESLLR-EVQLL 103
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEII 135
+L HP + KL E + GG+L ++ K+ V + +IR +++
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVL 159
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I ++H I +RDLKPEN+L+ + ++ + DF LS
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQS-FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K+K A + + + F+ ++ +GT Y++PEV+ G E D W+
Sbjct: 177 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCDVWS 235
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF G N + + V + P++ + DLI+++L P
Sbjct: 236 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 329 RL 330
R+
Sbjct: 296 RI 297
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 65
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 123
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 159
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 226 EFTFPDFVTE--GARDLISRLLKHNPSQR 252
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 63
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 121
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 157
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 164 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 224 EFTFPDFVTE--GARDLISRLLKHNPSQR 250
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 167 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 227 EFTFPDFVTE--GARDLISRLLKHNPSQR 253
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 62
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 120
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R ++ GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 163 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 223 EFTFPDFVTE--GARDLISRLLKHNPSQR 249
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 62
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 120
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 223 EFTFPDFVTE--GARDLISRLLKHNPSQR 249
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G+ V + Q F Y++E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELAN 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 160
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 227 EFTFPDFVTE--GARDLISRLLKHNPSQR 253
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + LGKG G V+L +R ++ ALKV+ K+ L K E + R E+ +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARER----QSKFILALKVLFKTQLE-KAGVEHQLRREVEI 65
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSRFDEQRTATYITELAN 123
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R ++ GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET+R V
Sbjct: 166 RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKG 347
P+FV + DLI RLL+ + +RL E+ EH + K
Sbjct: 226 EFTFPDFVTE--GARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 60
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 118
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 154
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 161 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 221 EFTFPDFVTE--GARDLISRLLKHNPSQR 247
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L ++ ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREK----QSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + LGKG G V+L +R + + ALKV+ K+ L K E + R E+ +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQS----KFILALKVLFKTQLE-KAGVEHQLRREVEI 65
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSRFDEQRTATYITELAN 123
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS 159
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET+R V
Sbjct: 166 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKG 347
P+FV + DLI RLL+ + +RL E+ EH + K
Sbjct: 226 EFTFPDFVTE--GARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A+K++ K + + EA+ EI +L +
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKV----AIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 71 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L+K T F
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEE---------DCLIKITDF------------------ 160
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 161 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 186
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 247 SEKALDLVKKLLVVDPKARF 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A+K++ K + + EA+ EI +L +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKV----AIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 72 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L+K T F
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEE---------DCLIKITDF------------------ 161
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 162 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 187
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 248 SEKALDLVKKLLVVDPKARF 267
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A+K++ K + + EA+ EI +L +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKV----AIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 72 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L+K T F
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEE---------DCLIKITDF------------------ 161
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 162 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 187
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 248 SEKALDLVKKLLVVDPKARF 267
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 61
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 119
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 155
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 162 RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 222 EFTFPDFVTE--GARDLISRLLKHNPSQR 248
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 158
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A+K++ K + + EA+ EI +L +
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKV----AIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 72 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L+K T F
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEE---------DCLIKITDF------------------ 161
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 162 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 187
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 248 SEKALDLVKKLLVVDPKARF 267
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A+K++ K + + EA+ EI +L +
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKV----AIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 78 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L+K T F
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEE---------DCLIKITDF------------------ 167
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 168 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 193
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 254 SEKALDLVKKLLVVDPKARF 273
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 192 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 252 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 281
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + D AD + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 47 LGKGGFAKCFEISD--AD--TKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 101
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 102 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 159
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 254 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 283
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + D AD + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 49 LGKGGFAKCFEISD--AD--TKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 103
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 161
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-- 301
R + GT +Y+ PE++ G H VD W +G+L YE+L G PF + ET+R ++
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 302 -MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+K P V T DLI +LL +P +RL
Sbjct: 237 DLKFPASVP--TGAQDLISKLLRHNPSERL 264
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+D+ + + LGKG G V+L ++ + ALKV+ KS + K E + R EI +
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIV----ALKVLFKSQIE-KEGVEHQLRREIEI 76
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYK--QNDRVFSPSVIRFYLSEI 134
+ L HP + +L + + Y P G+L YK Q F + E+
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKSCTFDEQRTATIMEEL 132
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H + +RD+KPEN+L+ G + + DF S
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 139/332 (41%), Gaps = 80/332 (24%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
+ + + +LG+GA G V +A + +A+K + +H E+ + E+ +
Sbjct: 7 DFEEIAVLGQGAFGQVV----KARNALDSRYYAIKKI-------RHTEEKLSTILSEVML 55
Query: 77 LSRLSHPFLPKLLGS-LETDEF------------LAWAVPYCPGGDLNVLRYKQNDRVFS 123
L+ L+H ++ + + LE F L + YC L L + +N
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
R + +I+ A+ ++H+ GI +RDLKP NI I +S +V + DF L++N+ + K
Sbjct: 116 DEYWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 184 QSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGE 243
N LP + L
Sbjct: 175 LDSQN-------------------------LPGSSDNL---------------------- 187
Query: 244 RSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYG-TTPFRGKNRKETFRNVL 301
S +GT YV+ EV+ G GH +D ++LGI+ +EM+Y +T N + R+V
Sbjct: 188 --TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS 245
Query: 302 MK-TPEFVGQRTALTDLIQRLL-EKDPVKRLG 331
++ P+F + + I RLL + DP KR G
Sbjct: 246 IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D K ++LGKG+ G V L D+ C A+KV+ K + K + E R E+++L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKIT--GQEC--AVKVISKRQVKQKTDKESLLR-EVQLL 80
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEII 135
+L HP + KL E + GG+L ++ K+ V + +IR +++
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----QVL 136
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I + H I +RDLKPEN+L+ + ++ + DF LS
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQS-FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K+K A + + + F+ ++ +GT Y++PEV+ G E D W+
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE-KCDVWS 212
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF G N + + V + P++ + DLI++ L P
Sbjct: 213 TGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 329 RL 330
R+
Sbjct: 273 RI 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
D G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 299 NVLMKTPEF----VGQRTALT-DLIQRLLEKDPVKRL 330
NV EF +AL D I+RLL KDP KR+
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ + +L +I+ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLH 131
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNL 175
++ IA+ DLKPENI++ + + DF L+ +
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W++G + Y +L G PF KET+ +
Sbjct: 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
Query: 301 L---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+ + A LIQ++L+ DP R
Sbjct: 228 KKNEYSIPKHINPVAA--SLIQKMLQTDPTAR 257
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 7/147 (4%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LGKG F + +D + FA K+V KS L H+ E+ + EI + L+H +
Sbjct: 23 LGKGGFAKCFEI----SDADTKEVFAGKIVPKSLLLKPHQREKMS-MEISIHRSLAHQHV 77
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
G E ++F+ + C L L + + + R+YL +I+ ++LH
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARYYLRQIVLGCQYLHRNR 135
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +RDLK N+ + + V + DF L+
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 16 DLDNLKALKI---LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW 72
DLD + +I LG GA G V+ ++ A A KV++ + E
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALA----AAKVIETKS----EEELEDYIV 65
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
EI +L+ HP++ KLLG+ D L + +CPGG ++ + + DR + I+
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCR 124
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS----RNLVKKTAF 181
+++ A+ LH+ I +RDLK N+L+ G + L DF +S + L K+ +F
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 177
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 228 RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV-----RGDGHEFAVDWWALGILTYEML 282
R++ ++ ++ +SF+GT +++PEVV + +++ D W+LGI EM
Sbjct: 157 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
Query: 283 YGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT----DLIQRLLEKDPVKRLGYLRGACE 338
P N + P + + + D ++ L+K+P R A +
Sbjct: 217 QIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR----PSAAQ 272
Query: 339 IKEHVFFKGV 348
+ EH F +
Sbjct: 273 LLEHPFVSSI 282
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A++++ K + + EA+ EI +L +
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKV----AIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 211 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L +K T F
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCL---------IKITDF------------------ 300
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 301 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 326
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 387 SEKALDLVKKLLVVDPKARF 406
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EI 74
L N + K +G+G V+ RAA P ALK V L +A+ RA EI
Sbjct: 31 LANFRIEKKIGRGQFSEVY----RAACLLDGVPVALKKVQIFDLM---DAKARADCIKEI 83
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLS 132
+L +L+HP + K S D L + GDL+ + +K+ R+ + Y
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
++ A+EH+H+ + +RD+KP N+ I +G V L D L R KT
Sbjct: 144 QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG 290
++S VGT Y+SPE + +G+ F D W+LG L YEM +PF G
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%), Gaps = 58/259 (22%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
++LGKG G V R +V K + E +R E++V+ L HP
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEV--------MVMKELIRFDEETQRTFLKEVKVMRCLEHP 67
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ K +G L D+ L + Y GG L + K D + S + +I + +LH+
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGI-IKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
M I +RDL N L+R++ +V + DF L+R +V +
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK------------------------ 162
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
PE LKK + ++ + VG +++PE++ G
Sbjct: 163 ---------TQPEGLRSLKKP----------------DRKKRYTVVGNPYWMAPEMINGR 197
Query: 264 GHEFAVDWWALGILTYEML 282
++ VD ++ GI+ E++
Sbjct: 198 SYDEKVDVFSFGIVLCEII 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L LG+G TV+ D+ + +K+ +S AK R A EI++L LSH
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIK-KIKLGHRS--EAKDGINRTALREIKLLQELSH 71
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
P + LL + ++ + DL V+ K N V +PS I+ Y+ + +E+LH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 143 NMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +RDLKP N+L+ ++G + L DF L+++
Sbjct: 130 QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 81/320 (25%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKS--TLHAKHEAE--RRARWEIRVLSR 79
K LG GA G V L +R A++++ K + + EA+ EI +L +
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKV----AIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
L+HP + K+ + +++ + GG+L ++ + + Y +++ A++
Sbjct: 197 LNHPCIIKIKNFFDAEDYYI-VLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTEN 199
+LH GI +RDLKPEN+L+ L +K T F
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCL---------IKITDF------------------ 286
Query: 200 PKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEV 259
H +IL +T L +T GT Y++PEV
Sbjct: 287 --GHSKIL---------GETSLMRT-----------------------LCGTPTYLAPEV 312
Query: 260 ---VRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK-----TPEFVGQR 311
V G+ AVD W+LG++ + L G PF + + ++ + PE +
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 312 T-ALTDLIQRLLEKDPVKRL 330
+ DL+++LL DP R
Sbjct: 373 SEKALDLVKKLLVVDPKARF 392
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
D G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 299 NVLMKTPEF----VGQRTALT-DLIQRLLEKDPVKRL 330
NV EF +AL D I+RLL KDP KR+
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSG----HVTLTDFDLSRNL 175
+ IA+ DLKPENI++ + + DF L+ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + + ALKV+ K+ L K E + R E+ +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYL----AREKQRKFILALKVLFKAQLE-KAGVEHQLRREVEI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + DF S
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 152
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 159 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 219 EFTFPDFVTE--GARDLISRLLKHNPSQR 245
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V+ ++ A A KV++ + E EI +L+ HP++
Sbjct: 19 LGDGAFGKVYKAKNKETGALA----AAKVIETKS----EEELEDYIVEIEILATCDHPYI 70
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
KLLG+ D L + +CPGG ++ + + DR + I+ +++ A+ LH+
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS----RNLVKKTAF 181
I +RDLK N+L+ G + L DF +S + L K+ +F
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSF 169
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 13/130 (10%)
Query: 228 RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVV-----RGDGHEFAVDWWALGILTYEML 282
R++ ++ ++ +SF+GT +++PEVV + +++ D W+LGI EM
Sbjct: 149 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
Query: 283 YGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT----DLIQRLLEKDPVKRLGYLRGACE 338
P N + P + + + D ++ L+K+P R A +
Sbjct: 209 QIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR----PSAAQ 264
Query: 339 IKEHVFFKGV 348
+ EH F +
Sbjct: 265 LLEHPFVSSI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
D G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET N
Sbjct: 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 300 VLMKTPEF----VGQRTALT-DLIQRLLEKDPVKRL 330
V EF +AL D I+RLL KDP KR+
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ L E + + GG+L + + +L +I+ + +LH+
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGEL--FDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 144 MGIAYRDLKPENILIRQSG----HVTLTDFDLSRNL 175
+ IA+ DLKPENI++ + + DF L+ +
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER + GT Y++PEV+ GH F VD W+LG + Y +L G PF KET+ +
Sbjct: 195 DGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY--I 252
Query: 301 LMKTPEFVGQR---TALTDLIQRLLEKDPVKR 329
+K E+ R + LI+R+L DP R
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ LGKG + + D FA KVV KS L H+ E+ + EI + L +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEV----FAGKVVPKSMLLKPHQKEKMS-TEIAIHKSLDNP 102
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ G E D+F+ + C L L +K+ V P R+++ + I +++LHN
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEA-RYFMRQTIQGVQYLHN 160
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +RDLK N+ + V + DF L+ +
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 124/318 (38%), Gaps = 85/318 (26%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
+K LG GA G V L D+ A+K++ K+++ + + E+ VL L H
Sbjct: 42 VKKLGSGAYGEVLLCRDK----VTHVERAIKIIRKTSVSTS--SNSKLLEEVAVLKLLDH 95
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
P + KL E + GG+L ++ + + V + +I+ +++ + +
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK----QVLSGVTY 151
Query: 141 LHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
LH I +RDLKPEN+L+ + + + DF LS V
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS----------------------AVF 189
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
EN K+ + L + PE V R++
Sbjct: 190 ENQKKMKERLGTAYYIAPE---------------VLRKK--------------------- 213
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV-----LMKTPEFVGQRT 312
++ D W++G++ + +L G PF G+ +E R V +PE+
Sbjct: 214 -------YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE 266
Query: 313 ALTDLIQRLLEKDPVKRL 330
DLI+++L+ D +R+
Sbjct: 267 GAKDLIKQMLQFDSQRRI 284
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 79/327 (24%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V LV +R++ +K ++K E + EI VL L HP +
Sbjct: 30 LGSGAFGDVHLVEERSSG----LERVIKTINKDRSQVPME---QIEAEIEVLKSLDHPNI 82
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
K+ E + + C GG+L ++ + + S + + +++ A+ + H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH- 141
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
S HV D L + T+ P P+
Sbjct: 142 -----------------SQHVVHKDLKPENILFQDTS-----------PHSPI------- 166
Query: 204 RRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGD 263
+I+ L L F + E S + GT Y++PEV + D
Sbjct: 167 -KIIDFGLAEL------------------------FKSDEHSTNAAGTALYMAPEVFKRD 201
Query: 264 GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTALT----DLIQ 319
F D W+ G++ Y +L G PF G + +E + K P + + LT DL++
Sbjct: 202 V-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLK 260
Query: 320 RLLEKDPVKRLGYLRGACEIKEHVFFK 346
++L KDP +R A ++ H +FK
Sbjct: 261 QMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + +F S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 158
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 165 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 225 EFTFPDFVTE--GARDLISRLLKHNPSQR 251
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 7/156 (4%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L++ + + LGKG G V+L A + ++ ALKV+ K+ L K E + R E+ +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEI 63
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
S L HP + +L G + + Y P G V R Q F Y++E+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLG--TVYRELQKLSKFDEQRTATYITELAN 121
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H+ + +RD+KPEN+L+ +G + + +F S
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS 157
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R + GT +Y+ PE++ G H+ VD W+LG+L YE L G PF +ET++ V
Sbjct: 164 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
P+FV + DLI RLL+ +P +R
Sbjct: 224 EFTFPDFVTE--GARDLISRLLKHNPSQR 250
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W+LG + Y +L G PF KET+ +
Sbjct: 195 DGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY--I 252
Query: 301 LMKTPEFVGQR---TALTDLIQRLLEKDPVKR 329
+K E+ R + LI+R+L DP R
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ LGKG + + D FA KVV KS L H+ E+ + EI + L +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEV----FAGKVVPKSMLLKPHQKEKMS-TEIAIHKSLDNP 102
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ G E D+F+ + C L L +K+ V P R+++ + I +++LHN
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEA-RYFMRQTIQGVQYLHN 160
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +RDLK N+ + V + DF L+ +
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W+LG + Y +L G PF KET+ +
Sbjct: 195 DGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY--I 252
Query: 301 LMKTPEFVGQR---TALTDLIQRLLEKDPVKR 329
+K E+ R + LI+R+L DP R
Sbjct: 253 RIKKNEYSVPRHINPVASALIRRMLHADPTLR 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ LGKG + + D FA KVV KS L H+ E+ + EI + L +P
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEV----FAGKVVPKSMLLKPHQKEKMS-TEIAIHKSLDNP 102
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ G E D+F+ + C L L +K+ V P R+++ + I +++LHN
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEA-RYFMRQTIQGVQYLHN 160
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +RDLK N+ + V + DF L+ +
Sbjct: 161 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L + N + LK +GKG V L A A+K++DK+ L++ + ++ E+
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNS--SSLQKLFREV 57
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
R++ L+HP + KL +ET++ L + Y GG+ V Y R +I
Sbjct: 58 RIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGWMKEKEARAKFRQI 115
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+ A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 156 FTFGNKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 213
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 214 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 248
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+GER GT Y++PEV+ GH F VD W+LG + Y +L G PF KET+ +
Sbjct: 179 DGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY--I 236
Query: 301 LMKTPEFVGQR---TALTDLIQRLLEKDPVKR 329
+K E+ R + LI+R+L DP R
Sbjct: 237 RIKKNEYSVPRHINPVASALIRRMLHADPTLR 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ LGKG + + D FA KVV KS L H+ E+ + EI + L +P
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEV----FAGKVVPKSMLLKPHQKEKMS-TEIAIHKSLDNP 86
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ G E D+F+ + C L L +K+ V P R+++ + I +++LHN
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEPEA-RYFMRQTIQGVQYLHN 144
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +RDLK N+ + V + DF L+ +
Sbjct: 145 NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A+K++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A+K++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A+K++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 255
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
D G + GT +V+PE+V + D W++G++TY +L G +PF G ++ET
Sbjct: 168 IDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 299 NVLMKTPEF----VGQRTALT-DLIQRLLEKDPVKRL 330
NV EF +AL D I+RLL KDP KR+
Sbjct: 228 NVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLH--AKHEAERRARWEIRVLSRLSHP 83
LG G V +++ F K KS+ ++ + ER E+ +L + HP
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER----EVSILKEIQHP 74
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ + +L +I+ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLH 131
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNL 175
++ IA+ DLKPENI++ + + DF L+ +
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 75/299 (25%)
Query: 51 ALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL 110
A+K++++ + + + + + EI+ L HP + KL + T + Y GG+L
Sbjct: 40 AVKILNRQKIRSL-DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFD 170
K RV R + +I+ A+++ H + +RDLKPEN+L+ + + DF
Sbjct: 99 FDYICKHG-RVEEMEARRLF-QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156
Query: 171 LSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVS 230
LS N++ F + S + + A PE +G
Sbjct: 157 LS-NMMSDGEFLRDSCGSPNY---------------------AAPEVISG---------- 184
Query: 231 PVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG 290
Y PE VD W+ G++ Y +L GT PF
Sbjct: 185 ---------------------RLYAGPE----------VDIWSCGVILYALLCGTLPFDD 213
Query: 291 KNRKETFRNV---LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
++ F+ + + PE++ + A L+ +L+ DP+KR +I+EH +FK
Sbjct: 214 EHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMHMLQVDPLKR----ATIKDIREHEWFK 266
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 75/299 (25%)
Query: 51 ALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL 110
A+K++++ + + + + R EI+ L HP + KL + T + + Y GG+L
Sbjct: 45 AVKILNRQKIRSL-DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFD 170
Y + R +I+ +++ H + +RDLKPEN+L+ + + DF
Sbjct: 104 --FDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 161
Query: 171 LSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVS 230
LS N++ F + S + + A PE +G
Sbjct: 162 LS-NMMSDGEFLRXSCGSPNY---------------------AAPEVISG---------- 189
Query: 231 PVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG 290
Y PE VD W+ G++ Y +L GT PF
Sbjct: 190 ---------------------RLYAGPE----------VDIWSSGVILYALLCGTLPFDD 218
Query: 291 KNRKETFRNV---LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ F+ + + TP+++ ++ L++ +L+ DP+KR +I+EH +FK
Sbjct: 219 DHVPTLFKKICDGIFYTPQYLN--PSVISLLKHMLQVDPMKR----ATIKDIREHEWFK 271
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 120/299 (40%), Gaps = 75/299 (25%)
Query: 51 ALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL 110
A+K++++ + + + + + EI+ L HP + KL + T + Y GG+L
Sbjct: 40 AVKILNRQKIRSL-DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL 98
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFD 170
K RV R + +I+ A+++ H + +RDLKPEN+L+ + + DF
Sbjct: 99 FDYICKHG-RVEEMEARRLF-QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFG 156
Query: 171 LSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVS 230
LS N++ F + S + + A PE +G
Sbjct: 157 LS-NMMSDGEFLRTSCGSPNY---------------------AAPEVISG---------- 184
Query: 231 PVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG 290
Y PE VD W+ G++ Y +L GT PF
Sbjct: 185 ---------------------RLYAGPE----------VDIWSCGVILYALLCGTLPFDD 213
Query: 291 KNRKETFRNV---LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
++ F+ + + PE++ + A L+ +L+ DP+KR +I+EH +FK
Sbjct: 214 EHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMHMLQVDPLKR----ATIKDIREHEWFK 266
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G + GT E+V+PE+V + D W++G++TY +L G +PF G+ ++ET N+
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224
Query: 302 MKTPEFVGQRTALT-----DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVR 349
+F + + T D I+RLL KDP +R+ + EH + K +R
Sbjct: 225 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL----EHSWIKAIR 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 50 FALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPG 107
+A K + K L + R E + +L + HP + L E + + G
Sbjct: 33 YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 92
Query: 108 GDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG---- 162
G+L + L K++ + +L +I+ + +LH+ IA+ DLKPENI++
Sbjct: 93 GELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 149
Query: 163 HVTLTDFDLSRNLVKKTAFE 182
+ L DF ++ + F+
Sbjct: 150 RIKLIDFGIAHKIEAGNEFK 169
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A++++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + + F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDEFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W G+L YE L G PF + ET R NV
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACE 338
+K P F+ + DLI +LL P +RL L+G E
Sbjct: 228 DLKFPPFLSDGS--KDLISKLLRYHPPQRLP-LKGVME 262
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+D+ ++ LGKG G V+L A + + ALKV+ KS L K E + R EI +
Sbjct: 13 IDDFDIVRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEI 67
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYK--QNDRVFSPSVIRFYLSEI 134
S L HP + ++ + + + + P G+L YK Q F ++ E+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 123
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H + +RD+KPEN+L+ G + + DF S
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G + GT E+V+PE+V + D W++G++TY +L G +PF G+ ++ET N+
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245
Query: 302 MKTPEFVGQRTALT-----DLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVR 349
+F + + T D I+RLL KDP +R+ + EH + K +R
Sbjct: 246 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL----EHSWIKAIR 294
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 50 FALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPG 107
+A K + K L + R E + +L + HP + L E + + G
Sbjct: 54 YAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 113
Query: 108 GDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG----H 163
G+L + + +L +I+ + +LH+ IA+ DLKPENI++
Sbjct: 114 GEL--FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPR 171
Query: 164 VTLTDFDLSRNLVKKTAFE 182
+ L DF ++ + F+
Sbjct: 172 IKLIDFGIAHKIEAGNEFK 190
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A++++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVRIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYMS--TDCENLLKKFLILNPSKR 255
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W G+L YE L G PF + ET R NV
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACE 338
+K P F+ + DLI +LL P +RL L+G E
Sbjct: 229 DLKFPPFLSDGS--KDLISKLLRYHPPQRLP-LKGVME 263
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+D+ + LGKG G V+L A + + ALKV+ KS L K E + R EI +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEI 68
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYK--QNDRVFSPSVIRFYLSEI 134
S L HP + ++ + + + + P G+L YK Q F ++ E+
Sbjct: 69 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 124
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H + +RD+KPEN+L+ G + + DF S
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L T R A+K++DK+ L+ + ++ E+R+
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHIL---TGR-EVAIKIIDKTQLNPT--SLQKLFREVRI 64
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 123 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 161 FTVGGKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 218
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L++R L +P+KR
Sbjct: 219 LRERVLRGKYRIPFYMS--TDCENLLKRFLVLNPIKR 253
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR---NV 300
R GT +Y+ PE++ G H+ VD W G+L YE L G PF + ET R NV
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACE 338
+K P F+ + DLI +LL P +RL L+G E
Sbjct: 228 DLKFPPFLSDGS--KDLISKLLRYHPPQRLP-LKGVME 262
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+D+ + LGKG G V+L A + + ALKV+ KS L K E + R EI +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEI 67
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYK--QNDRVFSPSVIRFYLSEI 134
S L HP + ++ + + + + P G+L YK Q F ++ E+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEEL 123
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+ + H + +RD+KPEN+L+ G + + DF S
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L T R A+K++DK+ L+ + ++ E+R+
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHIL---TGR-EVAIKIIDKTQLNPT--SLQKLFREVRI 67
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 164 FTVGGKLDAFCGAPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 221
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P ++ T +L++R L +P+KR
Sbjct: 222 LRERVLRGKYRIPFYMS--TDCENLLKRFLVLNPIKR 256
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + LK +GKG V L A A+K++DK+ L++ + ++ E+R+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNS--SSLQKLFREVRI 66
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+HP + KL +ET++ L Y GG+ V Y R +I+
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGE--VFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 10/97 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 163 FTFGNKLDAFCGAPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 296 TFRNVL---MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
VL + P + T +L+++ L +P KR
Sbjct: 221 LRERVLRGKYRIPFYXS--TDCENLLKKFLILNPSKR 255
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G + GT E+V+PE+V + D W++G++TY +L G +PF G+ ++ET N+
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231
Query: 302 MKTPEFVGQRTALT-----DLIQRLLEKDPVKRL 330
+F + + T D I+RLL KDP +R+
Sbjct: 232 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 50 FALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPG 107
+A K + K L + R E + +L + HP + L E + + G
Sbjct: 40 YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSG 99
Query: 108 GDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG---- 162
G+L + L K++ + +L +I+ + +LH+ IA+ DLKPENI++
Sbjct: 100 GELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 156
Query: 163 HVTLTDFDLSRNLVKKTAF 181
+ L DF ++ + F
Sbjct: 157 RIKLIDFGIAHKIEAGNEF 175
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 88/266 (33%)
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT---LT 167
++L + R F+ + ++ A++ LHN GIA+RDLKPENIL V+ +
Sbjct: 97 SILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC 156
Query: 168 DFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSA 227
DFDL + LN + P+ + PE T
Sbjct: 157 DFDLGSGI---------KLNGDCSPI-------------------STPELLTP------- 181
Query: 228 RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAV-----DWWALGILTYEML 282
G+ EY++PEVV E ++ D W+LG++ Y +L
Sbjct: 182 ---------------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 283 YGTTPFRGK-------NRKE---TFRNVLMKT----------PEFVGQRTALTDLIQRLL 322
G PF G+ +R E +N+L ++ ++ A DLI +LL
Sbjct: 221 SGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLL 280
Query: 323 EKDPVKRLGYLRGACEIKEHVFFKGV 348
+D +RL A ++ +H + +G
Sbjct: 281 VRDAKQRL----SAAQVLQHPWVQGC 302
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V+ ++ A A KV+D + E EI +L+ HP +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA----AAKVIDTKS----EEELEDYMVEIDILASCDHPNI 96
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
KLL + + L + +C GG ++ + + +R + S I+ + + A+ +LH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
I +RDLK NIL G + L DF +S
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDG-----HEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+R + F+GT +++PEVV + +++ D W+LGI EM P N
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
Query: 298 RNVLMKTPEFVGQ----RTALTDLIQRLLEKD 325
+ P + Q + D +++ LEK+
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 281
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V+ ++ A A KV+D + E EI +L+ HP +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA----AAKVIDTKS----EEELEDYMVEIDILASCDHPNI 96
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
KLL + + L + +C GG ++ + + +R + S I+ + + A+ +LH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
I +RDLK NIL G + L DF +S
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDG-----HEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+R +SF+GT +++PEVV + +++ D W+LGI EM P N
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
Query: 298 RNVLMKTPEFVGQ----RTALTDLIQRLLEKD 325
+ P + Q + D +++ LEK+
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 281
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V+ ++ A A KV+D + E EI +L+ HP +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLA----AAKVIDTKS----EEELEDYMVEIDILASCDHPNI 96
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
KLL + + L + +C GG ++ + + +R + S I+ + + A+ +LH+
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
I +RDLK NIL G + L DF +S
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS 182
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDG-----HEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+R +SF+GT +++PEVV + +++ D W+LGI EM P N
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 249
Query: 298 RNVLMKTPEFVGQ----RTALTDLIQRLLEKD 325
+ P + Q + D +++ LEK+
Sbjct: 250 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 281
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE- 306
+GT EY++PE++ D A D W +GI+ Y +L T+PF G++ +ET+ N+ +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 307 ----FVGQRTALTDLIQRLLEKDPVKR 329
F TD IQ LL K+P KR
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 104 YCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQS-- 161
Y GG++ L + + S + + + +I+ + +LH I + DLKP+NIL+
Sbjct: 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169
Query: 162 -GHVTLTDFDLSRNL 175
G + + DF +SR +
Sbjct: 170 LGDIKIVDFGMSRKI 184
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEIXI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 80/332 (24%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
+ + + +LG+GA G V +A + +A+K + +H E+ + E+ +
Sbjct: 7 DFEEIAVLGQGAFGQVV----KARNALDSRYYAIKKI-------RHTEEKLSTILSEVXL 55
Query: 77 LSRLSHPFLPKLLGS-LETDEF------------LAWAVPYCPGGDLNVLRYKQNDRVFS 123
L+ L+H ++ + + LE F L YC L L + +N
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
R + +I+ A+ ++H+ GI +R+LKP NI I +S +V + DF L++N+ + K
Sbjct: 116 DEYWRLF-RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 184 QSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGE 243
N LP + L
Sbjct: 175 LDSQN-------------------------LPGSSDNL---------------------- 187
Query: 244 RSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYG-TTPFRGKNRKETFRNVL 301
S +GT YV+ EV+ G GH +D ++LGI+ +E +Y +T N + R+V
Sbjct: 188 --TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVS 245
Query: 302 MK-TPEFVGQRTALTDLIQRLL-EKDPVKRLG 331
++ P+F + + I RLL + DP KR G
Sbjct: 246 IEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPG 277
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 14 SLDLDNL-KALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW 72
SLD + L L+ +GKG+ G VF + D + A+K++D L + +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVF----KGIDNRTQKVVAIKIID---LEEAEDEIEDIQQ 54
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVIRFYL 131
EI VLS+ P++ K GS D L + Y GG L++L D +++R
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 111
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
EI+ +++LH+ +RD+K N+L+ + G V L DF ++ L
Sbjct: 112 -EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP 287
Q D + N+FVGT +++PEV++ ++ D W+LGI E+ G P
Sbjct: 153 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 128/353 (36%), Gaps = 94/353 (26%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
D D +K +G G G L+ D+ A+K +++ + + EI
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELV----AVKYIERGA-----AIDENVQREII 68
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ--NDRVFSPSVIRFYLSE 133
L HP + + + T LA + Y GG+L Y++ N FS RF+ +
Sbjct: 69 NHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQ 124
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQS--GHVTLTDFDLSRNLVKKTAFEKQSLNNNKF 191
++ + + H+M I +RDLK EN L+ S + + DF S++ V
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV--------------- 169
Query: 192 PVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGT 251
LH+ P++ G T
Sbjct: 170 -------------------LHSQPKSTVG------------------------------T 180
Query: 252 EEYVSPEVVRGDGHEFAV-DWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK------- 303
Y++PEV+ ++ + D W+ G+ Y ML G PF +R + +
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHV-FFKGVRWDLLTD 355
P+ + LI R+ DP R+ EIK H F K + DL+ +
Sbjct: 241 IPDDIRISPECCHLISRIFVADPATRISIP----EIKTHSWFLKNLPADLMNE 289
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 299 NVLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
N+ + EF Q + L D I++LL K+ KRL
Sbjct: 229 NITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHA------KHEAERRARWEIRVLSR 79
LG G F + + + + +A K + K A + E ER E+ +L +
Sbjct: 20 LGSGQ----FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER----EVSILRQ 71
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAI 138
+ HP + L E + + GG+L + L K++ S ++ +I+ +
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGV 128
Query: 139 EHLHNMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAFE 182
+LH IA+ DLKPENI++ H+ L DF L+ + F+
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 14 SLDLDNL-KALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW 72
SLD + L L+ +GKG+ G VF + D + A+K++D L + +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVF----KGIDNRTQKVVAIKIID---LEEAEDEIEDIQQ 54
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVIRFYL 131
EI VLS+ P++ K GS D L + Y GG L++L D +++R
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 111
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
EI+ +++LH+ +RD+K N+L+ + G V L DF ++ L
Sbjct: 112 -EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP 287
Q D + N FVGT +++PEV++ ++ D W+LGI E+ G P
Sbjct: 153 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET N
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 300 VLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
+ + EF Q + L D I++LL K+ KRL
Sbjct: 230 ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHP 83
LG G V + + + +A K + K A R E + +L ++ H
Sbjct: 20 LGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ S ++ +I+ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAFE 182
IA+ DLKPENI++ H+ L DF L+ + F+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVD--KSTLHAKHEAERRARWEIR 75
D + +++GKGA F V R + FA+K+VD K T E R E
Sbjct: 24 DVYELCEVIGKGA----FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EAS 78
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR--VFSPSVIRFYLSE 133
+ L HP + +LL + +D L + G DL K+ D V+S +V Y+ +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 134 IICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNL 175
I+ A+ + H+ I +RD+KPEN+L+ S V L DF ++ L
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL 183
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 215 PENKTGLKKTKSA--RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K SA ++ Q ++G + VGT +++PEVV+ + + VD W
Sbjct: 158 PENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 217
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
G++ + +L G PF G ++ F ++ M ++ + DL++R+L DP
Sbjct: 218 GCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 328 KRL 330
+R+
Sbjct: 277 ERI 279
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MK 303
GT E+ +PEV G + D W++G+L+Y +L G +PF G+N ET RNV M
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRL 330
F G D I++LL DP R+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRM 403
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWEIR 75
LD+ + LG GA G V V +RA FA K V HE+++ R EI+
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNN----FAAKFV-----MTPHESDKETVRKEIQ 206
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+S L HP L L + E D + + GG+L +++++ + Y+ ++
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVC 265
Query: 136 CAIEHLHNMGIAYRDLKPENILI--RQSGHVTLTDFDLSRNLVKKTA 180
+ H+H + DLKPENI+ ++S + L DF L+ +L K +
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MK 303
GT E+ +PEV G + D W++G+L+Y +L G +PF G+N ET RNV M
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRL 330
F G D I++LL DP R+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRM 297
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWEIR 75
LD+ + LG GA G V V +RA FA K V HE+++ R EI+
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNN----FAAKFV-----MTPHESDKETVRKEIQ 100
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+S L HP L L + E D + + GG+L +++++ + Y+ ++
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVC 159
Query: 136 CAIEHLHNMGIAYRDLKPENILI--RQSGHVTLTDFDLSRNLVKKTA 180
+ H+H + DLKPENI+ ++S + L DF L+ +L K +
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEIXI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMXGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+ N + K +GKG V L T R A+K++DK+ L+ + ++ E+R+
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVL---TGR-EVAVKIIDKTQLNPT--SLQKLFREVRI 67
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L+HP + KL +ET++ L + Y GG+ V Y R +I+
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
A+++ H I +RDLK EN+L+ ++ + DF S
Sbjct: 126 AVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
F G + ++F G+ Y +PE+ +G DG E VD W+LG++ Y ++ G+ PF G+N KE
Sbjct: 164 FTVGNKLDTFCGSPPYAAPELFQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE 221
Query: 296 TFRNVL 301
VL
Sbjct: 222 LRERVL 227
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET N
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 300 VLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
+ + EF Q + L D I++LL K+ KRL
Sbjct: 230 ITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHP 83
LG G V + + + +A K + K A R E + +L ++ H
Sbjct: 20 LGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ S ++ +I+ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAFE 182
IA+ DLKPENI++ H+ L DF L+ + F+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 138/357 (38%), Gaps = 107/357 (29%)
Query: 24 KILGKGA----MGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
++LG+GA G V L + + +A+K+++K H++ R E+ L +
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKE--------YAVKIIEKQAGHSRSRVFR----EVETLYQ 66
Query: 80 L-SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
+ + +L+ E D GG ++L + Q + F+ + ++ A+
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGG--SILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVT---LTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
+ LH GIA+RDLKPENIL V+ + DFDL + LNN+ P+
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGM---------KLNNSCTPI-- 173
Query: 196 VTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYV 255
PE T G+ EY+
Sbjct: 174 -----------------TTPELTTP----------------------------CGSAEYM 188
Query: 256 SPEVV-----RGDGHEFAVDWWALGILTYEMLYGTTPFRGK-------NRKETFRNVLMK 303
+PEVV + ++ D W+LG++ Y ML G PF G +R E R K
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNK 248
Query: 304 TPEFVGQ-------------RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKG 347
E + + + DLI +LL +D +RL A ++ +H + +G
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 56
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 114
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 115 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 158
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 159 -------ERLLNKMCGTLP--------------------------------------YVA 173
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEIXI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMXGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 17 LDNLKA--------LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAER 68
+ NLKA L+ +GKG+ G VF + D + A+K++D L +
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVF----KGIDNRTQKVVAIKIID---LEEAEDEIE 65
Query: 69 RARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVI 127
+ EI VLS+ P++ K GS D L + Y GG L++L D +++
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL 125
Query: 128 RFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
R EI+ +++LH+ +RD+K N+L+ + G V L DF ++ L
Sbjct: 126 R----EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP 287
Q D + N FVGT +++PEV++ ++ D W+LGI E+ G P
Sbjct: 168 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 14 SLDLDNL-KALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW 72
S+D + L L+ +GKG+ G VF + D + A+K++D L + +
Sbjct: 22 SMDPEELFTKLEKIGKGSFGEVF----KGIDNRTQKVVAIKIID---LEEAEDEIEDIQQ 74
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVIRFYL 131
EI VLS+ P++ K GS D L + Y GG L++L D +++R
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR--- 131
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL----VKKTAF 181
EI+ +++LH+ +RD+K N+L+ + G V L DF ++ L +K+ F
Sbjct: 132 -EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 184
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP 287
Q D + N+FVGT +++PEV++ ++ D W+LGI E+ G P
Sbjct: 173 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMXGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMXGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMCGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 58
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 116
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 160
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 161 -------ERLLNKMCGTLP--------------------------------------YVA 175
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
+++LG GA VFLV R FALK + KS E EI VL ++ H
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKL----FALKCIKKSPAFRDSSLEN----EIAVLKKIKH 65
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVI-----RFYLSEIICA 137
+ L E+ + GG+L DR+ V + +++ A
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGELF-------DRILERGVYTEKDASLVIQQVLSA 118
Query: 138 IEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
+++LH GI +RDLKPEN+L ++ + +TDF LS+
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWAL 274
PEN L +++++ + ++ GT YV+PEV+ + AVD W++
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193
Query: 275 GILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
G++TY +L G PF + + F + ++P + + D I LLEKDP +R
Sbjct: 194 GVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNER 253
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 112/273 (41%), Gaps = 71/273 (26%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+++ ++ LG+GA G V L +R + A+K+VD + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAV----AVKIVD---MKRAVDCPENIKKEICI 57
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L+H + K G + YC GG+L R + + + P RF+ +++
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL-FDRIEPDIGMPEPDAQRFF-HQLMA 115
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
+ +LH +GI +RD+KPEN+L+ + ++ ++DF L+ T F NN+
Sbjct: 116 GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA------TVFRY----NNR------ 159
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
R+L + LP YV+
Sbjct: 160 -------ERLLNKMXGTLP--------------------------------------YVA 174
Query: 257 PEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
PE++ R + H VD W+ GI+ ML G P+
Sbjct: 175 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 128/329 (38%), Gaps = 77/329 (23%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + + ++ LG+G G VF ++ D C +A+K + L + A + E++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDD----CNYAIKRI---RLPNRELAREKVMREVKA 56
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---LRYKQNDRVF----------S 123
L++L HP + + + P P L + L K+N + +
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
SV +I A+E LH+ G+ +RDLKP NI V + D
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD--------------- 161
Query: 184 QSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGE 243
F ++ + + + +LT +P
Sbjct: 162 -------FGLVTAMDQDEEEQTVLT----PMPAYA------------------------- 185
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGK-NRKETFRNV-- 300
R VGT+ Y+SPE + G+ + VD ++LG++ +E+LY PF + R T +V
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRN 242
Query: 301 LMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
L P F + ++Q +L P++R
Sbjct: 243 LKFPPLFTQKYPCEYVMVQDMLSPSPMER 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 21 KALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL---HAKHEAERRARWEIRVL 77
K + LG G M TV+L D +KV K+ K E +R E+
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTI--------LNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
S+LSH + ++ E D+ + Y G L+ Y ++ S + ++I+
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS--EYIESHGPLSVDTAINFTNQILDG 123
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I+H H+M I +RD+KP+NILI + + + DF +++ L
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG--------KNRKE 295
++N +GT +Y SPE +G+ + D +++GI+ YEML G PF G K+ ++
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD 227
Query: 296 TFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
+ NV + + Q +L+++I R EKD R
Sbjct: 228 SVPNVTTDVRKDIPQ--SLSNVILRATEKDKANR 259
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 88/266 (33%)
Query: 111 NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT---LT 167
++L + R F+ + ++ A++ LHN GIA+RDLKPENIL V+ +
Sbjct: 97 SILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC 156
Query: 168 DFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSA 227
DF L + LN + P+ + PE T
Sbjct: 157 DFGLGSGI---------KLNGDCSPI-------------------STPELLTP------- 181
Query: 228 RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAV-----DWWALGILTYEML 282
G+ EY++PEVV E ++ D W+LG++ Y +L
Sbjct: 182 ---------------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 283 YGTTPFRGK-------NRKE---TFRNVLMKT----------PEFVGQRTALTDLIQRLL 322
G PF G+ +R E +N+L ++ ++ A DLI +LL
Sbjct: 221 SGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLL 280
Query: 323 EKDPVKRLGYLRGACEIKEHVFFKGV 348
+D +RL A ++ +H + +G
Sbjct: 281 VRDAKQRL----SAAQVLQHPWVQGC 302
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 33/160 (20%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+GA V+ R + P+ALKV+ K+ ++ R EI VL RLSHP +
Sbjct: 61 LGRGATSIVY----RCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNI 110
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE---------IIC 136
KL ET ++ + GG+L F V + Y SE I+
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGEL-----------FDRIVEKGYYSERDAADAVKQILE 159
Query: 137 AIEHLHNMGIAYRDLKPENILIRQ---SGHVTLTDFDLSR 173
A+ +LH GI +RDLKPEN+L + + DF LS+
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 247 SFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE-TFRNVLMKTP 305
+ GT Y +PE++RG + VD W++GI+TY +L G PF + + FR +L
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
Query: 306 EFVG---QRTALT--DLIQRLLEKDPVKRL 330
F+ +L DL+++L+ DP KRL
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
D G ++ GT YV+PEV+ + AVD W++G++ Y +L G PF +N + F
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 300 VL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+L +P + + D I+ L+EKDP KR
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG GA V L D+ A+K + K L K E EI VL ++ HP
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLV----AIKCIAKEALEGK---EGSMENEIAVLHKIKHPN 77
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY--------LSEIIC 136
+ L E+ L + GG+L DR+ FY + +++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELF-------DRIVEKG---FYTERDASRLIFQVLD 127
Query: 137 AIEHLHNMGIAYRDLKPENIL---IRQSGHVTLTDFDLSR 173
A+++LH++GI +RDLKPEN+L + + + ++DF LS+
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET N
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 300 VLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
+ + EF + L D I++LL K+ KRL
Sbjct: 230 ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHP 83
LG G V + + + +A K + K A R E + +L ++ H
Sbjct: 20 LGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ S ++ +I+ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAFE 182
IA+ DLKPENI++ H+ L DF L+ + F+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
D G ++ GT YV+PEV+ + AVD W++G++ Y +L G PF +N + F
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 300 VL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+L +P + + D I+ L+EKDP KR
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG GA V L D+ A+K + K L K E EI VL ++ HP
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLV----AIKCIAKEALEGK---EGSMENEIAVLHKIKHPN 77
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY--------LSEIIC 136
+ L E+ L + GG+L DR+ FY + +++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELF-------DRIVEKG---FYTERDASRLIFQVLD 127
Query: 137 AIEHLHNMGIAYRDLKPENIL---IRQSGHVTLTDFDLSR 173
A+++LH++GI +RDLKPEN+L + + + ++DF LS+
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
D G ++ GT YV+PEV+ + AVD W++G++ Y +L G PF +N + F
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 300 VL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+L +P + + D I+ L+EKDP KR
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG GA V L D+ A+K + K L K E EI VL ++ HP
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLV----AIKCIAKEALEGK---EGSMENEIAVLHKIKHPN 77
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY--------LSEIIC 136
+ L E+ L + GG+L DR+ FY + +++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELF-------DRIVEKG---FYTERDASRLIFQVLD 127
Query: 137 AIEHLHNMGIAYRDLKPENIL---IRQSGHVTLTDFDLSR 173
A+++LH++GI +RDLKPEN+L + + + ++DF LS+
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
++ + L+ +G+G G V+ +A D R ALK + L A+ E A EI
Sbjct: 20 MEKYQKLEKVGEGTYGVVY----KAKDSQGRI-VALKRI---RLDAEDEGIPSTAIREIS 71
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L L HP + L+ + ++ L + VL +N S I+ YL +++
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL--DENKTGLQDSQIKIYLYQLL 129
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ H H I +RDLKP+N+LI G + L DF L+R
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
D G ++ GT YV+PEV+ + AVD W++G++ Y +L G PF +N + F
Sbjct: 170 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ 229
Query: 300 VL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+L +P + + D I+ L+EKDP KR
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG GA V L D+ A+K + K L K E EI VL ++ HP
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLV----AIKCIAKKALEGK---EGSMENEIAVLHKIKHPN 77
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY--------LSEIIC 136
+ L E+ L + GG+L DR+ FY + +++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELF-------DRIVEKG---FYTERDASRLIFQVLD 127
Query: 137 AIEHLHNMGIAYRDLKPENIL---IRQSGHVTLTDFDLSR 173
A+++LH++GI +RDLKPEN+L + + + ++DF LS+
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK 167
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET
Sbjct: 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 228
Query: 299 NVLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
N+ + EF + L D I++LL K+ KRL
Sbjct: 229 NITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 14/163 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHP 83
LG G V + + + +A K + K A R E + +L ++ H
Sbjct: 20 LGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ S ++ +I+ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAF 181
IA+ DLKPENI++ H+ L DF L+ + F
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF 175
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
++G + GT E+V+PE+V + D W++G++TY +L G +PF G ++ET N
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 229
Query: 300 VLMKT----PEFVGQRTALT-DLIQRLLEKDPVKRL 330
+ + EF + L D I++LL K+ KRL
Sbjct: 230 ITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE--IRVLSRLSHP 83
LG G V + + + +A K + K A R E + +L ++ H
Sbjct: 20 LGSGQFAIV----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ L E + + GG+L + L K++ S ++ +I+ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 143 NMGIAYRDLKPENILIRQSG----HVTLTDFDLSRNLVKKTAFE 182
IA+ DLKPENI++ H+ L DF L+ + F+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK 176
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
++ + L+ +G+G G V+ +A D R ALK + L A+ E A EI
Sbjct: 20 MEKYQKLEKVGEGTYGVVY----KAKDSQGRI-VALKRI---RLDAEDEGIPSTAIREIS 71
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+L L HP + L+ + ++ L + VL +N S I+ YL +++
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVL--DENKTGLQDSQIKIYLYQLL 129
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ H H I +RDLKP+N+LI G + L DF L+R
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
LK +K+LG GA GTV+ T + P A+K+++++T +A E +++
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMAS 96
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
+ HP L +LLG + + P G L ++ D + S ++ + + +I +
Sbjct: 97 MDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMM 154
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+L + +RDL N+L++ HV +TDF L+R L
Sbjct: 155 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G+ ++ GT YV+PEV+ + AVD W++G++ Y +L G PF +N + F +L
Sbjct: 176 GDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL 235
Query: 302 MKTPEFVGQ-----RTALTDLIQRLLEKDPVKR 329
EF + D I+ L+EKDP KR
Sbjct: 236 KAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 268
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA V L ++A FA+K + K L K E EI VL ++ H +
Sbjct: 30 LGTGAFSEVVLAEEKATGKL----FAVKCIPKKALKGK---ESSIENEIAVLRKIKHENI 82
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL--NVLR---YKQNDRVFSPSVIRFYLSEIICAIEH 140
L E+ L + GG+L ++ Y + D + ++IR +++ A+ +
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKD---ASTLIR----QVLDAVYY 135
Query: 141 LHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
LH MGI +RDLKPEN+L + + ++DF LS+
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK 171
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW------EIRVLS 78
+LGKG G V+ D + ++ + K ER +R+ EI +
Sbjct: 29 VLGKGTYGIVYAGRD--------------LSNQVRIAIKEIPERDSRYSQPLHEEIALHK 74
Query: 79 RLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVFSPSVIRFYLSEIICA 137
L H + + LGS + F+ + PGG L+ +LR K + I FY +I+
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 138 IEHLHNMGIAYRDLKPENILIRQ-SGHVTLTDFDLSRNLV 176
+++LH+ I +RD+K +N+LI SG + ++DF S+ L
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 245 SNSFVGTEEYVSPEVV----RGDGHEFAVDWWALGILTYEMLYGTTPFR--GKNRKETFR 298
+ +F GT +Y++PE++ RG G A D W+LG EM G PF G+ + F+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGK--AADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 237
Query: 299 NVLMKT-PEFVGQRTALTD-LIQRLLEKDPVKR 329
+ K PE +A I + E DP KR
Sbjct: 238 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
LK +K+LG GA GTV+ T + P A+K+++++T +A E +++
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT---GPKANVEFMDEALIMAS 73
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
+ HP L +LLG + + P G L ++ D + S ++ + + +I +
Sbjct: 74 MDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMM 131
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+L + +RDL N+L++ HV +TDF L+R L
Sbjct: 132 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWE---------IRV 76
LG GA G V L ++ A+KV+ KS ++ E I +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEK----AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEI 134
L L HP + KL E ++ + GG+L ++ + D + ++++ +I
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK----QI 155
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSG---HVTLTDFDLS 172
+ I +LH I +RD+KPENIL+ ++ + DF LS
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G G V + + A K++ + K E + EI V+++L H
Sbjct: 95 EILGGGRFGQVH----KCEETATGLKLAAKIIKTRGMKDKEEVKN----EISVMNQLDHA 146
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV------IRFYLSEIICA 137
L +L + E+ + + Y GG+L DR+ S ++ +I
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELF-------DRIIDESYNLTELDTILFMKQICEG 199
Query: 138 IEHLHNMGIAYRDLKPENILI--RQSGHVTLTDFDLSR 173
I H+H M I + DLKPENIL R + + + DF L+R
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 250 GTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKT 304
GT E+++PEVV D F D W++G++ Y +L G +PF G N ET N+L ++
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 305 PEFVGQRTALTDLIQRLLEKDPVKRL 330
EF + I +LL K+ R+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRI 335
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 111/313 (35%), Gaps = 83/313 (26%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDK------STLHAKHEAERRARWEIRVLS 78
+LGKG GTVF H T R A+KV+ + S L +V +
Sbjct: 38 LLGKGGFGTVFAGHRL----TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGA 93
Query: 79 RLSHPFLPKLLGSLETDE-FLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
HP + +LL ET E F+ P DL ++ PS R + +++ A
Sbjct: 94 GGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS--RCFFGQVVAA 151
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
I+H H+ G+ +RD+K ENILI DL R K F +L +++ P T
Sbjct: 152 IQHCHSRGVVHRDIKDENILI-----------DLRRGCAKLIDFGSGALLHDE----PYT 196
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
+ F GT Y P
Sbjct: 197 D-------------------------------------------------FDGTRVYSPP 207
Query: 258 E-VVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTALTD 316
E + R H W+LGIL Y+M+ G PF R + + P V
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPF---ERDQEILEAELHFPAHVSPDCCA-- 262
Query: 317 LIQRLLEKDPVKR 329
LI+R L P R
Sbjct: 263 LIRRCLAPKPSSR 275
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 45/193 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE-RRARWEIRVLSRLSHPF 84
+G+G+ G V + A + R A+K+++K+ + + + R + E+R++ +L HP
Sbjct: 34 IGQGSYGVVRV----AIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPN 89
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDL-----------------NVLRYK------QNDRV 121
+ +L E ++++ + C GG L +V++ + N+
Sbjct: 90 IARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149
Query: 122 FSPSVIRF---------------YLSEIICAIEHLHNMGIAYRDLKPENILI--RQSGHV 164
+ S+ F + +I A+ +LHN GI +RD+KPEN L +S +
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEI 209
Query: 165 TLTDFDLSRNLVK 177
L DF LS+ K
Sbjct: 210 KLVDFGLSKEFYK 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW------EIRVLS 78
+LGKG G V+ D + ++ + K ER +R+ EI +
Sbjct: 15 VLGKGTYGIVYAGRD--------------LSNQVRIAIKEIPERDSRYSQPLHEEIALHK 60
Query: 79 RLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVFSPSVIRFYLSEIICA 137
L H + + LGS + F+ + PGG L+ +LR K + I FY +I+
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 138 IEHLHNMGIAYRDLKPENILIRQ-SGHVTLTDFDLSRNLV 176
+++LH+ I +RD+K +N+LI SG + ++DF S+ L
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 160
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 245 SNSFVGTEEYVSPEVV----RGDGHEFAVDWWALGILTYEMLYGTTPFR--GKNRKETFR 298
+ +F GT +Y++PE++ RG G A D W+LG EM G PF G+ + F+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGK--AADIWSLGCTIIEMATGKPPFYELGEPQAAMFK 223
Query: 299 NVLMKT-PEFVGQRTA-LTDLIQRLLEKDPVKR 329
+ K PE +A I + E DP KR
Sbjct: 224 VGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 15/130 (11%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MK 303
T E+ +PE+V + F D WA+G+L Y +L G +PF G++ ET +NV
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIP 363
F D I+ LL+K+P KRL + EH + KG +L + IP
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRL----TVHDALEHPWLKGDHSNLTSR------IP 320
Query: 364 SREENDLTEK 373
S N + +K
Sbjct: 321 SSRYNKIRQK 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D L+ LG GA G V ++A T R F K ++ K+ + EI ++
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKA---TGRV-FVAKFINTPYPLDKYTVKN----EISIM 102
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
++L HP L L + E + + + GG+L R D S + + Y+ +
Sbjct: 103 NQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL-FDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 138 IEHLHNMGIAYRDLKPENILI--RQSGHVTLTDFDLSRNL 175
++H+H I + D+KPENI+ +++ V + DF L+ L
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 92/177 (51%), Gaps = 13/177 (7%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
L+ +K+LG GA GTV+ + P A+KV+ ++T +A + E V++
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT---SPKANKEILDEAYVMAG 75
Query: 80 LSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ P++ +LLG T + + +PY G L+ +R + R+ S ++ + + +I
Sbjct: 76 VGSPYVSRLLGICLTSTVQLVTQLMPY--GCLLDHVR-ENRGRLGSQDLLNWCM-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL-VKKTAFEKQSLNNNKFPV 193
+ +L ++ + +RDL N+L++ HV +TDF L+R L + +T + + K P+
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA---DGGKVPI 185
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+GKG+ G V+ + D + A+K++D L + + EI VLS+ P++
Sbjct: 27 IGKGSFGEVY----KGIDNHTKEVVAIKIID---LEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
+ GS L + Y GG L++L+ + + +++R EI+ +++LH+
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLDYLHSE 135
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
+RD+K N+L+ + G V L DF ++ L
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 167
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKET 296
Q D + N FVGT +++PEV++ ++F D W+LGI E+ G P +
Sbjct: 165 QLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV 224
Query: 297 FRNVLMKTPEFV-GQRTA-LTDLIQRLLEKDP 326
+ +P + GQ + + ++ L KDP
Sbjct: 225 LFLIPKNSPPTLEGQHSKPFKEFVEACLNKDP 256
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDK---STLHAKHEAERRARWEIRV 76
L+ L+ +G GA G+V A D R A+K + + S +HA RR E+R+
Sbjct: 30 LQGLRPVGSGAYGSVC----SAYDARLRQKVAVKKLSRPFQSLIHA-----RRTYRELRL 80
Query: 77 LSRLSHPFLPKLLG----SLETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
L L H + LL + ++F + V G DLN + Q S ++F +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALSDEHVQFLV 137
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+++ ++++H+ GI +RDLKP N+ + + + + DF L+R
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ 180
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
E +V T Y +PE++ H VD W++G + E+L G F G + + + ++
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Query: 302 MKTPEFVG 309
E VG
Sbjct: 243 ----EVVG 246
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 26 LGKGAMGTVF-LVHDRAADPTA--RCPFALKVVDKSTLHAKHEAERRARW--EIRVLSRL 80
LG G G V +H + A +C + L K+ R RW EI+++ +L
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC--------RQELSPKN----RERWCLEIQIMKKL 70
Query: 81 SHPFL------PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+HP + P L L ++ A+ YC GGDL L +N IR LS+
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 134 IICAIEHLHNMGIAYRDLKPENILIR 159
I A+ +LH I +RDLKPENI+++
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQ 156
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPF 288
+ D GE FVGT +Y++PE++ + VD+W+ G L +E + G PF
Sbjct: 173 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK--HEAERRARWEIR 75
DN + LGKGA F V R T FA K+++ L A+ + ER AR
Sbjct: 29 DNYDVKEELGKGA----FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR---- 80
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+ +L HP + +L S++ + F GG+L +S + + +I+
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQIL 138
Query: 136 CAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
+I + H+ GI +R+LKPEN+L+ + V L DF L+
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRN 299
++ E + F GT Y+SPEV++ D + VD WA G++ Y +L G PF +++ +
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 241
Query: 300 VLMK-----TPEFVGQRTALTDLIQRLLEKDPVKRL 330
+ +PE+ LI +L +P KR+
Sbjct: 242 IKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 26 LGKGAMGTVF-LVHDRAADPTA--RCPFALKVVDKSTLHAKHEAERRARW--EIRVLSRL 80
LG G G V +H + A +C + L K+ R RW EI+++ +L
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC--------RQELSPKN----RERWCLEIQIMKKL 69
Query: 81 SHPFL------PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+HP + P L L ++ A+ YC GGDL L +N IR LS+
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 134 IICAIEHLHNMGIAYRDLKPENILIR 159
I A+ +LH I +RDLKPENI+++
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQ 155
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPF 288
+ D GE FVGT +Y++PE++ + VD+W+ G L +E + G PF
Sbjct: 172 KELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 16 DLDNLKALKILGK-GAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
DL+ +I+G+ G G V+ ++ A A KV+D + E EI
Sbjct: 7 DLNPEDFWEIIGELGDFGKVYKAQNKETSVLA----AAKVIDTKS----EEELEDYMVEI 58
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
+L+ HP + KLL + + L + +C GG ++ + + +R + S I+ +
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQT 117
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+ A+ +LH+ I +RDLK NIL G + L DF +S
Sbjct: 118 LDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDG-----HEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+R +SF+GT +++PEVV + +++ D W+LGI EM P N
Sbjct: 164 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 223
Query: 298 RNVLMKTPEFVGQ----RTALTDLIQRLLEKD 325
+ P + Q + D +++ LEK+
Sbjct: 224 LKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKN 255
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L+ +GKG+ G VF + D + A+K++D L + + EI VLS+
Sbjct: 28 LERIGKGSFGEVF----KGIDNRTQQVVAIKIID---LEEAEDEIEDIQQEITVLSQCDS 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
++ K GS L + Y GG L++LR D I L EI+ +++L
Sbjct: 81 SYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF----QIATMLKEILKGLDYL 136
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
H+ +RD+K N+L+ + G V L DF ++ L
Sbjct: 137 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 170
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKET 296
Q D + N+FVGT +++PEV++ ++ D W+LGI E+ G P +
Sbjct: 169 QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP---NSDMHP 225
Query: 297 FRNVLM----KTPEFVGQRT-ALTDLIQRLLEKDPVKR 329
R + + P VG T + + I L KDP R
Sbjct: 226 MRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFR 263
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K+K A V G++ F GT Y+SPEV+R D + VD W
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ ++ + +PE+ DLI ++L +P
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 328 KRL 330
KR+
Sbjct: 251 KRI 253
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 31/168 (18%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRV 76
D + + LGKGA +V PT + +A K+++ L A+ H+ R E R+
Sbjct: 4 DEYQLFEELGKGAFS---VVRRCMKIPTGQ-EYAAKIINTKKLSARDHQKLER---EARI 56
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE--- 133
L HP + +L S+ + F GG+L F V R Y SE
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----------FEDIVAREYYSEADA 105
Query: 134 ------IICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
I+ ++ H H GI +RDLKPEN+L+ + V L DF L+
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDK---STLHAKHEAERRARWEIRV 76
L+ L+ +G GA G+V A D R A+K + + S +HA RR E+R+
Sbjct: 30 LQGLRPVGSGAYGSVC----SAYDARLRQKVAVKKLSRPFQSLIHA-----RRTYRELRL 80
Query: 77 LSRLSHPFLPKLLG----SLETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
L L H + LL + ++F + V G DLN + Q S ++F +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ---ALSDEHVQFLV 137
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+++ ++++H+ GI +RDLKP N+ + + + + DF L+R
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ 180
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
E +V T Y +PE++ H VD W++G + E+L G F G + + + ++
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 242
Query: 302 MKTPEFVG 309
E VG
Sbjct: 243 ----EVVG 246
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 115/307 (37%), Gaps = 92/307 (29%)
Query: 40 RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-HPFLPKLLGSLETDEFL 98
R +A+KV+DKS +R EI +L R HP + L + + +
Sbjct: 45 RCVHKATNMEYAVKVIDKS--------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHV 96
Query: 99 AWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENI 156
GG+L +LR K FS F L I +E+LH+ G+ +RDLKP NI
Sbjct: 97 YLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 157 L-IRQSGH---VTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLH 212
L + +SG+ + + DF F KQ N + P
Sbjct: 153 LYVDESGNPECLRICDF----------GFAKQLRAENGLLMTPC---------------- 186
Query: 213 ALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWW 272
+ V+P ++Q +D G D W
Sbjct: 187 -----------YTANFVAPEVLKRQGYDEG--------------------------CDIW 209
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVLMK--TPEFV---GQRTALT----DLIQRLLE 323
+LGIL Y ML G TPF +T +L + + +F G ++ DL+ ++L
Sbjct: 210 SLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLH 268
Query: 324 KDPVKRL 330
DP +RL
Sbjct: 269 VDPHQRL 275
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 129
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 73 EIRVLSRLSHPFLPKLLGSL----ETDEFLAWA-VPYCPGGDLNVLRYKQNDRVFSPSVI 127
EI +L +L HP + KL+ L E ++ + V P ++ L+ D+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA------ 139
Query: 128 RFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
RFY ++I IE+LH I +RD+KP N+L+ + GH+ + DF +S A ++
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVG 199
Query: 188 NNKFPVLPVTENPKRHRRILT 208
P E+ R+I +
Sbjct: 200 T---PAFMAPESLSETRKIFS 217
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 249 VGTEEYVSPEVVRGDGHEF---AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTP 305
VGT +++PE + F A+D WA+G+ Y ++G PF + + +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 306 EFVGQ---RTALTDLIQRLLEKDPVKRL 330
EF Q L DLI R+L+K+P R+
Sbjct: 258 EFPDQPDIAEDLKDLITRMLDKNPESRI 285
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 242 GERSNSFVGTEEYVSPEVVRGD------GHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
GE+ GT Y++PE+++ G+ VD WA G++ + +L G+ PF + +
Sbjct: 253 GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312
Query: 296 TFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
R ++ +PE+ + + + DLI RLL+ DP RL A + +H FF+
Sbjct: 313 MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARL----TAEQALQHPFFE 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKST-------LHAKHEAERRARWEIRVL 77
++G+G V RA FA+K+++ + L EA RR E +L
Sbjct: 101 VIGRGVSSVVRRCVHRATGHE----FAVKIMEVTAERLSPEQLEEVREATRR---ETHIL 153
Query: 78 SRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+++ HP + L+ S E+ F+ G+L Y S R + ++
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL--FDYLTEKVALSEKETRSIMRSLLE 211
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
A+ LH I +RDLKPENIL+ + + L+DF S +L
Sbjct: 212 AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK--HEAERRARWEIR 75
DN + LGKGA F V R T FA K+++ L A+ + ER AR
Sbjct: 6 DNYDVKEELGKGA----FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR---- 57
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+ +L HP + +L S++ + F GG+L +S + + +I+
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQIL 115
Query: 136 CAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
+I + H+ GI +R+LKPEN+L+ + V L DF L+
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 215 PENKTGLKKTKSARVSPVS-RRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K K A V ++ E + F GT Y+SPEV++ D + VD WA
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNVLM-----KTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF +++ + + +PE+ LI +L +P K
Sbjct: 193 CGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 329 RL 330
R+
Sbjct: 253 RI 254
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK--HEAERRARWEIR 75
DN + LGKGA F V R T FA K+++ L A+ + ER AR
Sbjct: 5 DNYDVKEELGKGA----FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR---- 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+ +L HP + +L S++ + F GG+L +S + + +I+
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQIL 114
Query: 136 CAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
+I + H+ GI +R+LKPEN+L+ + V L DF L+
Sbjct: 115 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 215 PENKTGLKKTKSARVSPVS-RRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K K A V ++ E + F GT Y+SPEV++ D + VD WA
Sbjct: 132 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 191
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNVLM-----KTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF +++ + + +PE+ LI +L +P K
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 251
Query: 329 RL 330
R+
Sbjct: 252 RI 253
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVV--DKSTLHAKHEAERRARWEIRVLSRL 80
L+ +G+G GTVF +R ALK V D A R EI +L L
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIV----ALKRVRLDDDDEGVPSSALR----EICLLKEL 58
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRY-KQNDRVFSPSVIRFYLSEIICAIE 139
H + +L L +D+ L +C D ++ +Y + P +++ +L +++ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP+N+LI ++G + L DF L+R
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRAR 71
+D++N + ++ +G+G G V+ AR +VV + E E A
Sbjct: 4 VDMENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAI 54
Query: 72 WEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
EI +L L+HP + KLL + T+ L + DL +I+ YL
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 114
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 167
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 304 TPEFV 308
PEF+
Sbjct: 283 CPEFM 287
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK--HEAERRARWEIR 75
DN + LGKGA F V R T FA K+++ L A+ + ER AR
Sbjct: 6 DNYDVKEELGKGA----FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR---- 57
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+ +L HP + +L S++ + F GG+L +S + + +I+
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQIL 115
Query: 136 CAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
+I + H+ GI +R+LKPEN+L+ + V L DF L+
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 215 PENKTGLKKTKSARVSPVS-RRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWA 273
PEN K K A V ++ E + F GT Y+SPEV++ D + VD WA
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
Query: 274 LGILTYEMLYGTTPFRGKNRKETFRNVLM-----KTPEFVGQRTALTDLIQRLLEKDPVK 328
G++ Y +L G PF +++ + + +PE+ LI +L +P K
Sbjct: 193 CGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 329 RL 330
R+
Sbjct: 253 RI 254
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 115/307 (37%), Gaps = 92/307 (29%)
Query: 40 RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-HPFLPKLLGSLETDEFL 98
R +A+KV+DKS +R EI +L R HP + L + + +
Sbjct: 45 RCVHKATNMEYAVKVIDKS--------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHV 96
Query: 99 AWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENI 156
GG+L +LR K FS F L I +E+LH+ G+ +RDLKP NI
Sbjct: 97 YLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 157 L-IRQSGH---VTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLH 212
L + +SG+ + + DF F KQ N + P
Sbjct: 153 LYVDESGNPECLRICDF----------GFAKQLRAENGLLMTPC---------------- 186
Query: 213 ALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWW 272
+ V+P ++Q +D G D W
Sbjct: 187 -----------YTANFVAPEVLKRQGYDEG--------------------------CDIW 209
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVLMK--TPEFV---GQRTALT----DLIQRLLE 323
+LGIL Y ML G TPF +T +L + + +F G ++ DL+ ++L
Sbjct: 210 SLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLH 268
Query: 324 KDPVKRL 330
DP +RL
Sbjct: 269 VDPHQRL 275
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 121/362 (33%), Gaps = 106/362 (29%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++ + L ++G+G+ G V ++ L+ D + ++ A EI++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV------KKIAMREIKL 77
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L +L H L LL + + + L+ L N V++ YL +II
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIIN 135
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPV 196
I H+ I +RD+KPENIL+ QSG V L DF +R L
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE----------- 184
Query: 197 TENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVS 256
+ TRW A PE G K A
Sbjct: 185 ---------VATRWYRA-PELLVGDVKYGKA----------------------------- 205
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM-------------- 302
VD WA+G L EM G F G + + +++M
Sbjct: 206 ------------VDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253
Query: 303 KTPEFVGQR------------------TALTDLIQRLLEKDPVKRLGYLRGACEIKEHVF 344
K P F G R + DL ++ L DP KR E+ H F
Sbjct: 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR----PFCAELLHHDF 309
Query: 345 FK 346
F+
Sbjct: 310 FQ 311
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K+K A V G++ F GT Y+SPEV+R D + VD W
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMW 190
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ ++ + +PE+ DLI ++L +P
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 328 KRL 330
KR+
Sbjct: 251 KRI 253
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 31/168 (18%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRV 76
D + + LGKGA +V PT + +A K+++ L A+ H+ R E R+
Sbjct: 4 DEYQLFEELGKGAFS---VVRRCMKIPTGQ-EYAAKIINTKKLSARDHQKLER---EARI 56
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE--- 133
L HP + +L S+ + F GG+L F V R Y SE
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----------FEDIVAREYYSEADA 105
Query: 134 ------IICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLS 172
I+ ++ H H GI +RDLKPEN+L+ + V L DF L+
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 114
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 167
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 304 TPEFV 308
PEF+
Sbjct: 283 CPEFM 287
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL +LE + + + V++ + + S +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 129
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 77
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 130
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 304 TPEFV 308
PEF+
Sbjct: 246 CPEFM 250
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 70
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 123
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 304 TPEFV 308
PEF+
Sbjct: 239 CPEFM 243
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D + +K LG GA G V L D+ A+K++ KS++ + E+ VL
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAER----AIKIIKKSSVTTTSNSGALLD-EVAVL 58
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL---NVLRYKQNDRVFSPSVIRFYLSEI 134
+L HP + KL E + GG+L +LR K FS + ++
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQV 113
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLS 172
+ +LH I +RDLKPEN+L+ + + DF LS
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 75
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 128
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 304 TPEFV 308
PEF+
Sbjct: 244 CPEFM 248
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A V GE+ F GT Y+SPEV+R D + VD W
Sbjct: 149 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 208
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ ++ + +PE+ DLI ++L +P
Sbjct: 209 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 268
Query: 328 KRL 330
KR+
Sbjct: 269 KRI 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 31/160 (19%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRVLSRLSHPF 84
LGKGA F V R A +A K+++ L A+ H+ R E R+ L HP
Sbjct: 30 LGKGA----FSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPN 82
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE---------II 135
+ +L S+ + GG+L F V R Y SE I+
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGEL-----------FEDIVAREYYSEADASHCIQQIL 131
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
A+ H H MG+ +RDLKPEN+L+ + V L DF L+
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 77
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 130
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 304 TPEFV 308
PEF+
Sbjct: 246 CPEFM 250
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 69
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 122
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 304 TPEFV 308
PEF+
Sbjct: 238 CPEFM 242
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 129
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 18 DNLKALKILGKGAMGTVF-LVHDRAADPTARCPFALKVVDKS---TLHAKHEAERRARW- 72
+N + +ILG+G V +H PT + +A+K++D + + A+ E R
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 58
Query: 73 -EIRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRF 129
E+ +L ++S HP + +L + ET+ F G+L + L K I
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L E+ICA LH + I +RDLKPENIL+ ++ LTDF S L
Sbjct: 119 ALLEVICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 238 SFDNGERSNSFVGTEEYVSPEVVRGD------GHEFAVDWWALGILTYEMLYGTTPFRGK 291
D GE+ GT Y++PE++ G+ VD W+ G++ Y +L G+ PF +
Sbjct: 160 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 219
Query: 292 NRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ R ++ +PE+ + DL+ R L P KR A E H FF+
Sbjct: 220 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 275
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 70
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLCQVIQME--LDHERMS 123
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 304 TPEFV 308
PEF+
Sbjct: 239 CPEFM 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 18 DNLKALKILGKGAMGTVF-LVHDRAADPTARCPFALKVVDKS---TLHAKHEAERRARW- 72
+N + +ILG+G V +H PT + +A+K++D + + A+ E R
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 73 -EIRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRF 129
E+ +L ++S HP + +L + ET+ F G+L + L K I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L E+ICA LH + I +RDLKPENIL+ ++ LTDF S L
Sbjct: 132 ALLEVICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 238 SFDNGERSNSFVGTEEYVSPEVVRGD------GHEFAVDWWALGILTYEMLYGTTPFRGK 291
D GE+ GT Y++PE++ G+ VD W+ G++ Y +L G+ PF +
Sbjct: 173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232
Query: 292 NRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ R ++ +PE+ + DL+ R L P KR A E H FF+
Sbjct: 233 KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 120
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V +P +
Sbjct: 121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 180
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 181 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 181 FEKQS 185
+ ++
Sbjct: 241 YVRKG 245
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDK---STLHAKHEAERRARWEIRV 76
L+ L+ +G GA G+V A D R A+K + + S +HA RR E+R+
Sbjct: 22 LQGLRPVGSGAYGSVC----SAYDARLRQKVAVKKLSRPFQSLIHA-----RRTYRELRL 72
Query: 77 LSRLSHPFLPKLLG----SLETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
L L H + LL + ++F + V G DLN + Q S ++F +
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ---ALSDEHVQFLV 129
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+++ ++++H+ GI +RDLKP N+ + + + + DF L+R
Sbjct: 130 YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ 172
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
E +V T Y +PE++ H VD W++G + E+L G F G + + + ++
Sbjct: 175 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM 234
Query: 302 MKTPEFVG 309
E VG
Sbjct: 235 ----EVVG 238
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V +P +
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D + +K LG GA G V L D+ A+K++ KS++ + E+ VL
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAER----AIKIIKKSSVTTTSNSGALLD-EVAVL 75
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL---NVLRYKQNDRVFSPSVIRFYLSEI 134
+L HP + KL E + GG+L +LR K FS + ++
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQV 130
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLS 172
+ +LH I +RDLKPEN+L+ + + DF LS
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 16/166 (9%)
Query: 18 DNLKALKILGKGAMGTVF-LVHDRAADPTARCPFALKVVDKS---TLHAKHEAERRARW- 72
+N + +ILG+G V +H PT + +A+K++D + + A+ E R
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 73 -EIRVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRF 129
E+ +L ++S HP + +L + ET+ F G+L + L K I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L E+ICA LH + I +RDLKPENIL+ ++ LTDF S L
Sbjct: 132 ALLEVICA---LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGD------GHEFAVDWWALGILTYEMLYGTTPFRGKN 292
D GE+ S GT Y++PE++ G+ VD W+ G++ Y +L G+ PF +
Sbjct: 174 LDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 293 RKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ R ++ +PE+ + DL+ R L P KR A E H FF+
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A V GE+ F GT Y+SPEV+R D + VD W
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLW 197
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ ++ + +PE+ DLI ++L +P
Sbjct: 198 ACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 328 KRL 330
KR+
Sbjct: 258 KRI 260
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 31/160 (19%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRVLSRLSHPF 84
LGKGA F V R A +A +++ L A+ H+ R E R+ L HP
Sbjct: 19 LGKGA----FSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRLLKHPN 71
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE---------II 135
+ +L S+ + GG+L F V R Y SE I+
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGEL-----------FEDIVAREYYSEADASHCIQQIL 120
Query: 136 CAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
A+ H H MG+ +R+LKPEN+L+ + V L DF L+
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
DN ++G+G+ G V+L +D+ + A+K V++ + +R R EI +L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNV----AIKKVNR-MFEDLIDCKRILR-EITIL 79
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYC--PGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+RL ++ +L + D+ L + Y D ++ + + + I+ L ++
Sbjct: 80 NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL-VKKTAFEKQSLNNNKFPVL 194
+H GI +RDLKP N L+ Q V + DF L+R + +K L N+ P
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG- 198
Query: 195 PVTENPKRH--RRILTRWLHALPE 216
P +N K+ ++TRW A PE
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRA-PE 221
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V +P +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 181 FEKQS 185
+ ++
Sbjct: 204 YVRKG 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V +P +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 85
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV-FSPSVIRFY-- 130
L + H + LLG+ + L V +C G+L+ LR K+N+ V + + Y
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKD 145
Query: 131 ---LSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 146 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 181 FEKQS 185
+ ++
Sbjct: 206 YVRKG 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 31/168 (18%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRV 76
D+ + + LGKGA F V R T +A K+++ L A+ H+ R E R+
Sbjct: 31 DDYQLFEELGKGA----FSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARI 83
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE--- 133
L HP + +L S+ + F GG+L F V R Y SE
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----------FEDIVAREYYSEADA 132
Query: 134 ------IICAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I+ ++ H+H I +RDLKPEN+L+ + V L DF L+
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A V GE+ F GT Y+SPEV+R D + VD W
Sbjct: 158 PENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIW 217
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ + ++ + +PE+ +LI ++L +P
Sbjct: 218 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 277
Query: 328 KRL 330
KR+
Sbjct: 278 KRI 280
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V +P +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 143
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 3 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 53
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKPEN+LI G + L DF L+R
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKPEN+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVV--DKSTLHAKHEAERRARWEIRVLSRL 80
L+ +G+G GTVF +R ALK V D A R EI +L L
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIV----ALKRVRLDDDDEGVPSSALR----EICLLKEL 58
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRY-KQNDRVFSPSVIRFYLSEIICAIE 139
H + +L L +D+ L +C D ++ +Y + P +++ +L +++ +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFC---DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP+N+LI ++G + L +F L+R
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 3 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 53
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKPEN+LI G + L DF L+R
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 4 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 54
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKPEN+LI G + L DF L+R
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D L K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 84
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFY--- 130
L + H + LLG+ + L V +C G+L+ LR K+N+ V + Y
Sbjct: 85 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 131 --LSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 65
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 124
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+E+L +RDL NIL+ V + DF L++ L + F K
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKPEN+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L +C G+L+ LR K+N+ V +P +
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L +C G+L+ LR K+N+ V +P +
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 25 ILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
ILG+GA VF H + D FA+KV + + + + R E VL +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDL-----FAIKVFNNISFLRPVDVQMR---EFEVLKKLNHK 67
Query: 84 FLPKLLGSLE--TDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ KL E T + +CP G L VL N S L +++ + H
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 141 LHNMGIAYRDLKPENIL--IRQSGHVT--LTDFDLSRNLVKKTAF 181
L GI +R++KP NI+ I + G LTDF +R L F
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPE-----VVRGDGHE---FAVDWWALGILTYEMLYGTTPFRG 290
++ E+ GTEEY+ P+ V+R D + VD W++G+ Y G+ PFR
Sbjct: 166 LEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
Query: 291 KNRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEI 339
+ V+ K G+ + +Q+ E P+ G + +C +
Sbjct: 226 FEGPRRNKEVMYKI--ITGKPSGAISGVQK-AENGPIDWSGDMPVSCSL 271
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 1 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H A E+++
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS---ELKI 74
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV---FSPSVIR-- 128
L + H + LLG+ + L +C G+L+ LR K+N+ V +P +
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 134
Query: 129 -FYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
L +IC +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 135 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 78
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 133
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 177
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
FV T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 247 CPEFMKK---LQPTVRTYVENRP-KYAGY 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-E 73
+D ++ +++G+GA G V RA D A+K ++ E+ER+A E
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD------VAIKQIES-------ESERKAFIVE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLS 132
+R LSR++HP + KL G+ L + Y GG L NVL + ++ + +
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 110
Query: 133 EIICAIEHLHNM---GIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVKKTAFEKQSLNN 188
+ + +LH+M + +RDLKP N+L+ G V + DF + ++ + + N
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-------QTHMTN 163
Query: 189 NK 190
NK
Sbjct: 164 NK 165
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK----T 304
V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 305 PEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 246 PEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 16/165 (9%)
Query: 25 ILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
ILG+GA VF H + D FA+KV + + + + R E VL +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDL-----FAIKVFNNISFLRPVDVQMR---EFEVLKKLNHK 67
Query: 84 FLPKLLGSLE--TDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ KL E T + +CP G L VL N S L +++ + H
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 141 LHNMGIAYRDLKPENIL--IRQSGHVT--LTDFDLSRNLVKKTAF 181
L GI +R++KP NI+ I + G LTDF +R L F
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPE-----VVRGDGHE---FAVDWWALGILTYEMLYGTTPFRG 290
++ E+ S GTEEY+ P+ V+R D + VD W++G+ Y G+ PFR
Sbjct: 166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225
Query: 291 KNRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEI 339
+ V+ K G+ + +Q+ E P+ G + +C +
Sbjct: 226 FEGPRRNKEVMYKI--ITGKPSGAISGVQK-AENGPIDWSGDMPVSCSL 271
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK----T 304
V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 305 PEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 246 PEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 81
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 136
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 180
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 250 CPEFMKK---LQPTVRTYVENRP-KYAGY 274
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-E 73
+D ++ +++G+GA G V RA D A+K ++ E+ER+A E
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD------VAIKQIES-------ESERKAFIVE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLS 132
+R LSR++HP + KL G+ L + Y GG L NVL + ++ + +
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCL 109
Query: 133 EIICAIEHLHNM---GIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVKKTAFEKQSLNN 188
+ + +LH+M + +RDLKP N+L+ G V + DF + ++ + + N
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-------QTHMTN 162
Query: 189 NK 190
NK
Sbjct: 163 NK 164
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK + LGKG G+V L +D D T AL V K H+ + +R + EI++L
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTG----ALVAV-KQLQHSGPDQQRDFQREIQIL 66
Query: 78 SRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L F+ K G + L + Y P G L + R+ S + Y S+I
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQIC 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L + +RDL NIL+ HV + DF L++ L
Sbjct: 126 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK + LGKG G+V L +D D T AL V K H+ + +R + EI++L
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTG----ALVAV-KQLQHSGPDQQRDFQREIQIL 65
Query: 78 SRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L F+ K G + L + Y P G L + R+ S + Y S+I
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQIC 124
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L + +RDL NIL+ HV + DF L++ L
Sbjct: 125 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK + LGKG G+V L +D D T AL V K H+ + +R + EI++L
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTG----ALVAV-KQLQHSGPDQQRDFQREIQIL 78
Query: 78 SRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L F+ K G + L + Y P G L + R+ S + Y S+I
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQIC 137
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L + +RDL NIL+ HV + DF L++ L
Sbjct: 138 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 77
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 132
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 246 CPEFMKK---LQPTVRTYVENRP-KYAGY 270
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 70
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 125
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 169
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 239 CPEFMKK---LQPTVRTYVENRP-KYAGY 263
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 4 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 54
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
PEF+ + L ++ +E P K GY
Sbjct: 245 CPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 9 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 59
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 3 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 53
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 3 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 53
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTP 305
T Y +PE++ +G++ + D W+LG++ Y ML G PF+ +R T + + +K
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 306 EFVGQRTA-------LTDLIQRLLEKDPVKRL 330
+F + A DLIQ LL DP KRL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 17/154 (11%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRL-SH 82
K LG+G+ F + + + FA+K++ K E + EI L H
Sbjct: 17 KPLGEGS----FSICRKCVHKKSNQAFAVKIISK-------RMEANTQKEITALKLCEGH 65
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
P + KL + GG+L + + FS + + + +++ A+ H+H
Sbjct: 66 PNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 143 NMGIAYRDLKPENILIRQSG---HVTLTDFDLSR 173
++G+ +RDLKPEN+L + + DF +R
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR 157
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 4 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 54
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 1 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 4 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 54
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 1 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 1 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 6 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 56
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 3 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 53
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 215 PENKTGLKKTKSARVSPVSRRQQSFDNGERSN--SFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A V G++ F GT Y+SPEV+R + + VD W
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIW 190
Query: 273 ALGILTYEMLYGTTPFRGKNRKETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPV 327
A G++ Y +L G PF +++ + ++ + +PE+ +LI ++L +P
Sbjct: 191 ACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 250
Query: 328 KRL 330
KR+
Sbjct: 251 KRI 253
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK-HEAERRARWEIRV 76
D + + +GKGA F V R +A K+++ L A+ H+ R E R+
Sbjct: 4 DEYQLYEDIGKGA----FSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARI 56
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE--- 133
L H + +L S+ + F GG+L F V R Y SE
Sbjct: 57 CRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL-----------FEDIVAREYYSEADA 105
Query: 134 ------IICAIEHLHNMGIAYRDLKPENILIR---QSGHVTLTDFDLS 172
I+ A+ H H MG+ +RDLKPEN+L+ + V L DF L+
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 9 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 59
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 5 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 55
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 2 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALXKIRLDTETEGVPSTAIRE 52
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWE 73
++N + ++ +G+G G V+ AR +VV + E E A E
Sbjct: 1 MENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALXKIRLDTETEGVPSTAIRE 51
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
I +L L+HP + KLL + T+ L + DL +I+ YL +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
DN + ++G+G+ G V+L +D+ A+ A+K V++ + +R R EI +L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNV----AIKKVNR-MFEDLIDCKRILR-EITIL 81
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYC--PGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+RL ++ +L + ++ L + Y D ++ + + + ++ L ++
Sbjct: 82 NRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +H GI +RDLKP N L+ Q V + DF L+R +
Sbjct: 142 LGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 96
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 155
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 68
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 127
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 70
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 129
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 72
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 131
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 83
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 142
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 65
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 124
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 83
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 142
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 69
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 128
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 71
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 130
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 65
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 124
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 64
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 123
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 63
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 122
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G+ G V + A R A K + K + E R + EI ++ L HP +
Sbjct: 34 IGRGSWGEVKI----AVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNI 85
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + E + + + C GG+L + RVF S + +++ A+ + H +
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 143
Query: 146 IAYRDLKPENILI---RQSGHVTLTDFDLS 172
+A+RDLKPEN L + L DF L+
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
F G+ + VGT YVSP+V+ G G E D W+ G++ Y +L G PF E
Sbjct: 176 FKPGKMMRTKVGTPYYVSPQVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
Query: 298 RNVLMKT---PE--FVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ T PE ++ LI+RLL K P +R+ L+ EH +F+
Sbjct: 234 LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL----EHEWFE 283
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V A D A+K + + + H +RA E+ +
Sbjct: 21 LKRYQQLKPIGSGAQGIVC----AAFDTVLGINVAVKKLSRPFQNQTHA--KRAYRELVL 74
Query: 77 LSRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
L ++H + LL + L + V +L + + + D + + L
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLL 130
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 131 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL--MKTP 305
+V T Y +PEV+ G G++ VD W++G + E++ G+ F+G + + + V+ + TP
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 306 --EFVGQRTALTDLIQRLLEKDP 326
EF+ AL ++ +E P
Sbjct: 243 SAEFMA---ALQPTVRNYVENRP 262
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAE---RRARWEI 74
+N + ++ +G+G G V+ AR +VV + E E A EI
Sbjct: 2 ENFQKVEKIGEGTYGVVY---------KARNKLTGEVVALKKIRLDTETEGVPSTAIREI 52
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
+L L+HP + KLL + T+ L + DL +I+ YL ++
Sbjct: 53 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ + H+ + +RDLKP+N+LI G + L DF L+R
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G+ G V + A R A K + K + E R + EI ++ L HP +
Sbjct: 17 IGRGSWGEVKI----AVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNI 68
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + E + + + C GG+L + RVF S + +++ A+ + H +
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCHKLN 126
Query: 146 IAYRDLKPENILI---RQSGHVTLTDFDLS 172
+A+RDLKPEN L + L DF L+
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETF 297
F G+ + VGT YVSP+V+ G G E D W+ G++ Y +L G PF E
Sbjct: 159 FKPGKMMRTKVGTPYYVSPQVLEGLYGPE--CDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
Query: 298 RNVLMKT---PE--FVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
+ T PE ++ LI+RLL K P +R+ L+ EH +F+
Sbjct: 217 LKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL----EHEWFE 266
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVD--KSTLHAKHEAERRARWEIR 75
D + +++GKG F V R + FA+K+VD K T E R E
Sbjct: 26 DVYELCEVIGKGP----FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EAS 80
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR--VFSPSVIRFYLSE 133
+ L HP + +LL + +D L + G DL K+ D V+S +V Y+ +
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 134 IICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNL 175
I+ A+ + H+ I +RD+KP +L+ S V L F ++ L
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKET 296
Q ++G + VGT +++PEVV+ + + VD W G++ + +L G PF G ++
Sbjct: 184 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERL 242
Query: 297 FRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
F ++ M ++ + DL++R+L DP +R+
Sbjct: 243 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 281
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVD--KSTLHAKHEAERRARWEIR 75
D + +++GKG F V R + FA+K+VD K T E R E
Sbjct: 24 DVYELCEVIGKGP----FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR-EAS 78
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR--VFSPSVIRFYLSE 133
+ L HP + +LL + +D L + G DL K+ D V+S +V Y+ +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 134 IICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNL 175
I+ A+ + H+ I +RD+KP +L+ S V L F ++ L
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKET 296
Q ++G + VGT +++PEVV+ + + VD W G++ + +L G PF G ++
Sbjct: 182 QLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERL 240
Query: 297 FRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
F ++ M ++ + DL++R+L DP +R+
Sbjct: 241 FEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V A D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQQLKPIGSGAQGIVC----AAFDTVLGINVAVKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
L ++H + LL + L + V +L + + + D + + L
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDH----ERMSYLL 132
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+++C I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 175
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL--MKTP 305
+V T Y +PEV+ G G+ VD W++G + E++ G F+G + + + V+ + TP
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 306 --EFVGQRTALTDLIQRLLEKDP 326
EF+ AL ++ +E P
Sbjct: 245 SAEFMA---ALQPTVRNYVENRP 264
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKV-VDKSTLHAKHEAERRAR 71
S++ D+ + +++G GA V A C P KV + + L +
Sbjct: 11 SINRDDYELQEVIGSGATAVV---------QAAYCAPKKEKVAIKRINLEKCQTSMDELL 61
Query: 72 WEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRY-----KQNDRVFSPS 125
EI+ +S+ HP + S + L + GG L+++++ + V S
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 121
Query: 126 VIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF----------DLSRNL 175
I L E++ +E+LH G +RD+K NIL+ + G V + DF D++RN
Sbjct: 122 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 176 VKKT 179
V+KT
Sbjct: 182 VRKT 185
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 66
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L K +R+ +++ Y S+I
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQIC 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+E+L +R+L NIL+ V + DF L++ L + + K
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 98
Query: 80 LSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 99 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 154
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 155 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G+ G VF +R L+ D + ++ A EIR+L +L HP L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI------KKIALREIRMLKQLKHPNL 64
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVL-RYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
LL L YC L+ L RY+ R +++ + + A+ H
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH 121
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAF 181
+RD+KPENILI + + L DF +R L + +
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 249 VGTEEYVSPEVVRGDG-HEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF 307
V T Y SPE++ GD + VD WA+G + E+L G + GK+ + +
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI------- 215
Query: 308 VGQRTALTDLIQR 320
R L DLI R
Sbjct: 216 ---RKTLGDLIPR 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKV-VDKSTLHAKHEAERRAR 71
S++ D+ + +++G GA V A C P KV + + L +
Sbjct: 6 SINRDDYELQEVIGSGATAVV---------QAAYCAPKKEKVAIKRINLEKCQTSMDELL 56
Query: 72 WEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD-LNVLRY-----KQNDRVFSPS 125
EI+ +S+ HP + S + L + GG L+++++ + V S
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDES 116
Query: 126 VIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF----------DLSRNL 175
I L E++ +E+LH G +RD+K NIL+ + G V + DF D++RN
Sbjct: 117 TIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 176 VKKT 179
V+KT
Sbjct: 177 VRKT 180
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 75
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 76
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 132
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK + LGKG G+V L +D D T AL V K H+ + +R + EI++L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTG----ALVAV-KQLQHSGPDQQRDFQREIQIL 62
Query: 78 SRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L F+ K G L + Y P G L + R+ S + Y S+I
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL-DASRLLLYSSQIC 121
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L + +RDL NIL+ HV + DF L++ L
Sbjct: 122 KGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 79
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 80 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 135
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 136 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 76
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 132
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 83
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 84 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 139
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 140 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 76
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 77 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 132
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
LD +++K ++G+G G V + R R A+K + + +A + R E+
Sbjct: 22 LDWNDIKFQDVIGEGNFGQV--LKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGEL 76
Query: 75 RVLSRLSH-PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVF----------- 122
VL +L H P + LLG+ E +L A+ Y P G N+L + + RV
Sbjct: 77 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANS 134
Query: 123 -----SPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN--- 174
S + + +++ +++L +RDL NIL+ ++ + DF LSR
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 194
Query: 175 LVKKT 179
VKKT
Sbjct: 195 YVKKT 199
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPF--GXLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 68
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + + P G L K +R+ +++ Y S+I
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQIC 127
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 80
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 136
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D L K LG+GA G V D TA A+K++ + H++H A E+++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFYLS- 132
L + H + LLG+ + L V +C G+L+ LR K+N+ V + + +L+
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 133 -EIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQ 184
+IC +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 185 S 185
Sbjct: 204 G 204
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
LD +++K ++G+G G V + R R A+K + + +A + R E+
Sbjct: 12 LDWNDIKFQDVIGEGNFGQV--LKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGEL 66
Query: 75 RVLSRLSH-PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVF----------- 122
VL +L H P + LLG+ E +L A+ Y P G N+L + + RV
Sbjct: 67 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANS 124
Query: 123 -----SPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN--- 174
S + + +++ +++L +RDL NIL+ ++ + DF LSR
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 184
Query: 175 LVKKT 179
VKKT
Sbjct: 185 YVKKT 189
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 74
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 130
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 75
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 76
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 77 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 132
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 133 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 67
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 68 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 123
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 124 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 74
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 75 VDNPHVCRLLGICLTSTVQLIMQLMPF--GXLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 130
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 131 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 298 TAAQALAHAYFAQYH-DPDDEPVADPYDQSLESRDL 332
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 77
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 133
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 22/195 (11%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA--RW 72
+ L ++ ++ LG+ G V+ H P + + V TL K E R R
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQT----QAVAIKTLKDKAEGPLREEFRH 61
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN---VLRYKQND---------- 119
E + +RL HP + LLG + D+ L+ YC GDL+ V+R +D
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 120 -RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
P +++I +E+L + + ++DL N+L+ +V ++D L R +
Sbjct: 122 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 179 TAFEKQSLNNNKFPV 193
+ + L N+ P+
Sbjct: 182 DYY--KLLGNSLLPI 194
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-H 82
KILG G+ GTV P A + D + + EI++L+ H
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------------EIKLLTESDDH 86
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV----------FSPSVIRFYLS 132
P + + S TD FL A+ C +LN+ ++ V ++P + L
Sbjct: 87 PNVIRYYCSETTDRFLYIALELC---NLNLQDLVESKNVSDENLKLQKEYNPISL---LR 140
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-------------LTDFDLSRNLVKKT 179
+I + HLH++ I +RDLKP+NIL+ S T ++DF L + L
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 180 AFEKQSLNN 188
+ +LNN
Sbjct: 201 XXFRXNLNN 209
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-H 82
KILG G+ GTV P A + D + + EI++L+ H
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------------EIKLLTESDDH 86
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV----------FSPSVIRFYLS 132
P + + S TD FL A+ C +LN+ ++ V ++P + L
Sbjct: 87 PNVIRYYCSETTDRFLYIALELC---NLNLQDLVESKNVSDENLKLQKEYNPISL---LR 140
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-------------LTDFDLSRNLVKKT 179
+I + HLH++ I +RDLKP+NIL+ S T ++DF L + L
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 180 AFEKQSLNN 188
+ +LNN
Sbjct: 201 XXFRXNLNN 209
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 70
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 71 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAEG 126
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 127 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-H 82
KILG G+ GTV P A + D A EI++L+ H
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI------------ALMEIKLLTESDDH 68
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV----------FSPSVIRFYLS 132
P + + S TD FL A+ C +LN+ ++ V ++P + L
Sbjct: 69 PNVIRYYCSETTDRFLYIALELC---NLNLQDLVESKNVSDENLKLQKEYNPISL---LR 122
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-------------LTDFDLSRNLVKKT 179
+I + HLH++ I +RDLKP+NIL+ S T ++DF L + L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 180 AFEKQSLNN 188
+ + +LNN
Sbjct: 183 SSFRTNLNN 191
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 22/195 (11%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA--RW 72
+ L ++ ++ LG+ G V+ H P + + V TL K E R R
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQT----QAVAIKTLKDKAEGPLREEFRH 78
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN---VLRYKQND---------- 119
E + +RL HP + LLG + D+ L+ YC GDL+ V+R +D
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 120 -RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
P +++I +E+L + + ++DL N+L+ +V ++D L R +
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 179 TAFEKQSLNNNKFPV 193
+ + L N+ P+
Sbjct: 199 DYY--KLLGNSLLPI 211
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 77
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 299
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 300 TAAQALAHAYF 310
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 81
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARH 180
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 303
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 304 TAAQALAHAYF 314
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL +LE + + + V++ + + S +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 18 DNLKALKILGKGAMGTVF-LVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
++LK L +G+GA G+V +VH P+ + A+K + +ST+ K + + ++ V
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHK----PSGQI-MAVKRI-RSTVDEKEQKQLLMDLDV-V 74
Query: 77 LSRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
+ P++ + G+L E D ++ + Y D V ++
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+ A+ HL N+ I +RD+KP NIL+ +SG++ L DF +S LV A
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 250 GTEEYVSPEVV----RGDGHEFAVDWWALGILTYEMLYGTTPF 288
G Y++PE + G++ D W+LGI YE+ G P+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW- 72
+L++ LK L+ +GKG G V L R +C K++A +A
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-------------IKNDATAQAFLA 63
Query: 73 EIRVLSRLSHPFLPKLLGSL-ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFY 130
E V+++L H L +LLG + E L Y G L + LR + + +++F
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNK 190
L ++ A+E+L +RDL N+L+ + ++DF L++ + + K
Sbjct: 124 L-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------ASSTQDTGK 175
Query: 191 FPVLPVTENPKRHRRILTR 209
PV R ++ T+
Sbjct: 176 LPVKWTAPEALREKKFSTK 194
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 80
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 302
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 303 TAAQALAHAYF 313
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
K++G G+ G VF +D +V K L K R E++++ + HP
Sbjct: 46 KVIGNGSFGVVFQAKLVESD---------EVAIKKVLQDKRFKNR----ELQIMRIVKHP 92
Query: 84 FLPKLL------GSLETDEFLAWAVPYCPGGDLNVLR-YKQNDRVFSPSVIRFYLSEIIC 136
+ L G + + FL + Y P R Y + + +I+ Y+ +++
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 137 AIEHLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLV 176
++ ++H++GI +RD+KP+N+L+ SG + L DF ++ L+
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF------QSIIHAK-----RTYRELRLL 87
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 309
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 310 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 344
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 42/189 (22%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-H 82
KILG G+ GTV P A + D + + EI++L+ H
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------------EIKLLTESDDH 68
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV----------FSPSVIRFYLS 132
P + + S TD FL A+ C +LN+ ++ V ++P + L
Sbjct: 69 PNVIRYYCSETTDRFLYIALELC---NLNLQDLVESKNVSDENLKLQKEYNPISL---LR 122
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-------------LTDFDLSRNLVKKT 179
+I + HLH++ I +RDLKP+NIL+ S T ++DF L + L
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 180 AFEKQSLNN 188
+ +LNN
Sbjct: 183 XXFRXNLNN 191
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA--ERRARWEIRVLSRLS 81
+ + G+ G V D P A V D T++ ++ +R EIR+L+
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPG---------GDLNVLRYKQNDRVFSPSVIRFYLS 132
HP +LG D F+ + P DL + + Q V SP I++++
Sbjct: 88 HP---NILGL--RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMY 141
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I+ + LH G+ +RDL P NIL+ + +T+ DF+L+R
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 248 FVGTEEYVSPE-VVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE 306
+V Y +PE V++ G VD W+ G + EM FRG TF N L K E
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 307 FVG 309
VG
Sbjct: 249 VVG 251
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA--ERRARWEIRVLSRLS 81
+ + G+ G V D P A V D T++ ++ +R EIR+L+
Sbjct: 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPG---------GDLNVLRYKQNDRVFSPSVIRFYLS 132
HP +LG D F+ + P DL + + Q V SP I++++
Sbjct: 88 HP---NILGL--RDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMY 141
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I+ + LH G+ +RDL P NIL+ + +T+ DF+L+R
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 248 FVGTEEYVSPE-VVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE 306
+V Y +PE V++ G VD W+ G + EM FRG TF N L K E
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 307 FVG 309
VG
Sbjct: 249 VVG 251
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 86
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 248 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 308 I----TAAQALAHAYF 319
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+N++ ++ +G+GA G VF RA PF + V A + + + E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVF--QARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALM 104
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN----------VLRYKQND-----RVF 122
+ +P + KLLG + + Y GDLN V +D RV
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 123 SPSVIRFYLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
SP +E +C + +L +RDL N L+ ++ V + DF LSRN+
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
Query: 176 VKKTAFEKQSLNNNKFPV 193
++ N+ P+
Sbjct: 225 YSADYYKAD--GNDAIPI 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLXQVIQME--LDHERMS 129
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
PEF+
Sbjct: 245 CPEFM 249
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 21/165 (12%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D D A+K + + + H +RA E+ +
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNV----AIKKLSRPFQNQTHA--KRAYRELVL 69
Query: 77 LSRLSHPFLPKLLG------SLE--TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIR 128
+ ++H + LL +LE D +L + D N+ + Q + +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-----MDANLXQVIQME--LDHERMS 122
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ F G++ + + V+ +
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 304 TPEFV 308
PEF+
Sbjct: 238 CPEFM 242
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 80
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARH 179
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 302
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 303 TAAQALAHAYF 313
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 81
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 303
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 304 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 338
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 86
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 247
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 248 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 307
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 308 I----TAAQALAHAYF 319
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN + + F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 298 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 332
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW- 72
+L++ LK L+ +GKG G V L R +C K++A +A
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-------------IKNDATAQAFLA 235
Query: 73 EIRVLSRLSHPFLPKLLGSL-ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFY 130
E V+++L H L +LLG + E L Y G L + LR + + +++F
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 295
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNK 190
L ++ A+E+L +RDL N+L+ + ++DF L++ + + K
Sbjct: 296 L-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------ASSTQDTGK 347
Query: 191 FPVLPVTENPKRHRRILTR 209
PV R ++ T+
Sbjct: 348 LPVKWTAPEALREKKFSTK 366
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + PF S E DL
Sbjct: 297 I----TAAQALAHAYFAQYH-DPDDEPVADPFDQSFESRDL 332
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW- 72
+L++ LK L+ +GKG G V L R +C K++A +A
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-------------IKNDATAQAFLA 48
Query: 73 EIRVLSRLSHPFLPKLLGSL-ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFY 130
E V+++L H L +LLG + E L Y G L + LR + + +++F
Sbjct: 49 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNK 190
L ++ A+E+L +RDL N+L+ + ++DF L++ + + K
Sbjct: 109 L-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE-------ASSTQDTGK 160
Query: 191 FPVLPVTENPKRHRRILTR 209
PV R ++ T+
Sbjct: 161 LPVKWTAPEALREKKFSTK 179
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 87
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 309
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 310 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 344
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 87
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 309
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 310 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 344
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 81
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 303
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 304 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 338
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 21 KALKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+ L +G GA G+V D R A PF +S +HAK R E+R
Sbjct: 48 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELR 96
Query: 76 VLSRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+L + H + LL +EF + V + G DLN + Q + ++F
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFL 153
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+ +I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 320
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 321 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 355
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 82
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 243
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 244 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 304 I----TAAQALAHAYF 315
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 82
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 38/163 (23%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG--------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 291 --------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPV 327
K E+ RN L + P+ F+G DL++++L D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 328 KRLGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
KR+ A + H +F D + + P+ S E DL
Sbjct: 302 KRI----TAAQALAHAYFAQYH-DPDDEPVADPYDQSLESRDL 339
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 82
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 37/138 (26%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG--------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 291 --------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPV 327
K E+ RN L + P+ F+G DL++++L D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 328 KRLGYLRGACEIKEHVFF 345
KR+ A + H +F
Sbjct: 302 KRI----TAAQALAHAYF 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
FV T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 298 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 332
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 80
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 242 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 302 I----TAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 74
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 131
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 173
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 176 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 235
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 236 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 295
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 296 I----TAAQALAHAYF 307
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 82
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 38/163 (23%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG--------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 291 --------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPV 327
K E+ RN L + P+ F+G DL++++L D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 328 KRLGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
KR+ A + H +F D + + P+ S E DL
Sbjct: 302 KRI----TAAQALAHAYFAQYH-DPDDEPVADPYDQSSESRDL 339
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
FV T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN + + F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 298 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 332
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 95
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 38/155 (24%)
Query: 249 VGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------------- 290
V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 291 ------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLRG 335
K E+ RN + + F+G DL++++L D KR+
Sbjct: 263 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI----T 318
Query: 336 ACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 319 AAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 352
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 77
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 299
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 300 TAAQALAHAYF 310
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 77
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 299
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 300 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 334
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 94
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Query: 291 ------------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN + + F+G DL++++L D KR
Sbjct: 256 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 315
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + P+ S E DL
Sbjct: 316 I----TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 351
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 81
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 291 -------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN + + F+G DL++++L D KR+
Sbjct: 248 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 303
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 304 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 338
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 94
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 193
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 62/161 (38%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 256 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 315
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + P+ S E DL
Sbjct: 316 I----TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 351
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 24 KILGKGAMGTVFLVHDRAADPTA-RCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
+++GKG G V+ H D R A+K + + T + EA R E ++ L+H
Sbjct: 27 RVIGKGHFGVVY--HGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLR---EGLLMRGLNH 81
Query: 83 PFLPKLLGSLETDEFLAWAV-PY-CPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
P + L+G + E L + PY C G L +R Q + +I F L ++ +E+
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVK-DLISFGL-QVARGMEY 139
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
L +RDL N ++ +S V + DF L+R+++ + + Q + + PV
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G++ EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFV 308
+PEF+
Sbjct: 245 SPEFM 249
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 72
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 234 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 294 I----TAAQALAHAYF 305
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 85
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 142
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 184
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Query: 291 -------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN + + F+G DL++++L D KR+
Sbjct: 252 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 307
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 308 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 342
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 95
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 257 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 316
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 317 I----TAAQALAHAYF 328
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 98
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 155
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 200 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 260 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 319
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 320 I----TAAQALAHAYF 331
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 95
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 194
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Query: 291 ------------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN + + F+G DL++++L D KR
Sbjct: 257 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 316
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + P+ S E DL
Sbjct: 317 I----TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 352
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 80
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 241
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 242 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 301
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 302 I----TAAQALAHAYF 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 71
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 293 I----TAAQALAHAYF 304
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 77
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 239 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 298
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 299 I----TAAQALAHAYF 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 72
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 174 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 233
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 234 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 293
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 294 I----TAAQALAHAYF 305
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 37/130 (28%)
Query: 249 VGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------------- 290
V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 291 ------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLRG 335
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI----T 298
Query: 336 ACEIKEHVFF 345
A + H +F
Sbjct: 299 AAQALAHAYF 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 30 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 84
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 143
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 144 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 185
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 13 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 67
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 126
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 71
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
FV T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 291 -------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN + + F+G DL++++L D KR+
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 293
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 294 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 328
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 142/392 (36%), Gaps = 124/392 (31%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + + ++ +G+G G VF ++ D C +A+K + L + A + E++
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDD----CNYAIKRI---RLPNRELAREKVMREVKA 57
Query: 77 LSRLSHPFLPKLLGS-LET---------------DEFLAWAVPYCPGGDLNVLRYKQNDR 120
L++L HP + + + LET DE W + D ++ ++ D
Sbjct: 58 LAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDP 117
Query: 121 V--------FSPSVIRFYLS----------------------------------EIICAI 138
PS + YL +I A+
Sbjct: 118 FSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAV 177
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTE 198
E LH+ G+ +RDLKP NI V + D F ++ +
Sbjct: 178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGD----------------------FGLVTAMD 215
Query: 199 NPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPE 258
+ + +LT +P T + VGT+ Y+SPE
Sbjct: 216 QDEEEQTVLT----PMPAYATHXGQ-------------------------VGTKLYMSPE 246
Query: 259 VVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKET-FRNVLMKTPEFVGQRTALTD- 316
+ G+ + VD ++LG++ +E+LY + + R T RN +K P Q+
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRN--LKFPLLFTQKYPQEHM 304
Query: 317 LIQRLLEKDPVKRLGYLRGACEIKEHVFFKGV 348
++Q +L P +R A +I E+ F+ +
Sbjct: 305 MVQDMLSPSPTER----PEATDIIENAIFENL 332
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 22 ALKILGKGAMGTVF-LVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRL 80
L+ LG+G+ G+V+ +H ++V + + + + + EI ++ +
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETG----------QIVAIKQVPVESDLQEIIK-EISIMQQC 81
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
P + K GS + L + YC G + +++R + ++ + I L + +E
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLE 139
Query: 140 HLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+LH M +RD+K NIL+ GH L DF ++ L A
Sbjct: 140 YLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA 180
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 22/124 (17%)
Query: 237 QSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG------ 290
Q D + N +GT +++PEV++ G+ D W+LGI EM G P+
Sbjct: 174 QLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233
Query: 291 -----KNRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
N TFR + + F TD +++ L K P +R A ++ +H F
Sbjct: 234 IFMIPTNPPPTFRKPELWSDNF-------TDFVKQCLVKSPEQR----ATATQLLQHPFV 282
Query: 346 KGVR 349
+ +
Sbjct: 283 RSAK 286
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 19 NLKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+LK L+ LGKG G+V + +D D T V K H+ E R EI +L
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEV-----VAVKKLQHSTEEHLRDFEREIEIL 68
Query: 78 SRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L H + K G + L + Y P G L +R+ +++ Y S+I
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQIC 127
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+E+L +RDL NIL+ V + DF L++ L
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 71
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 291 ------------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN + + F+G DL++++L D KR
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + P+ S E DL
Sbjct: 293 I----TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 328
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 73
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL L + V + G DLN + Q + ++F +
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 130
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 175 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 234
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 235 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 294
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 295 I----TAAQALAHAYF 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 116/326 (35%), Gaps = 84/326 (25%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+GA GTV+ D A + + L + + E EI V+ +P +
Sbjct: 28 IGQGASGTVYTAMDVATGQEV-------AIRQMNLQQQPKKELIIN-EILVMRENKNPNI 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
L S + L + Y GG L +V+ D +V R E + A+E LH+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR----ECLQALEFLHSN 135
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHR 204
+ +RD+K +NIL+ G V LTDF + E KR
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--------------------EQSKRSE 175
Query: 205 RILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDG 264
+ T + A PE V T + P+V
Sbjct: 176 MVGTPYWMA-PE--------------------------------VVTRKAYGPKV----- 197
Query: 265 HEFAVDWWALGILTYEMLYGTTPFRGKN-RKETFRNVLMKTPEFVGQR---TALTDLIQR 320
D W+LGI+ EM+ G P+ +N + + TPE D + R
Sbjct: 198 -----DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 321 LLEKDPVKRLGYLRGACEIKEHVFFK 346
L+ D KR A E+ +H F K
Sbjct: 253 CLDMDVEKR----GSAKELLQHQFLK 274
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D L K LG+GA G V D TA A+K++ + H++H A E+++
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFYLS- 132
L + H + LLG+ + L V +C G+L+ LR K+N+ V + + +L+
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 133 --------EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQ 184
++ +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 185 S 185
Sbjct: 204 G 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 17/163 (10%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW- 72
+L++ LK L+ +GKG G V L R +C K++A +A
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-------------IKNDATAQAFLA 54
Query: 73 EIRVLSRLSHPFLPKLLGSL-ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFY 130
E V+++L H L +LLG + E L Y G L + LR + + +++F
Sbjct: 55 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
L ++ A+E+L +RDL N+L+ + ++DF L++
Sbjct: 115 L-DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 27/185 (14%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
LD +++K ++G+G G V + R R A+K + + +A + R E+
Sbjct: 19 LDWNDIKFQDVIGEGNFGQV--LKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGEL 73
Query: 75 RVLSRLSH-PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV------------ 121
VL +L H P + LLG+ E +L A+ Y P G N+L + + RV
Sbjct: 74 EVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG--NLLDFLRKSRVLETDPAFAIANS 131
Query: 122 ----FSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN--- 174
S + + +++ +++L +R+L NIL+ ++ + DF LSR
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEV 191
Query: 175 LVKKT 179
VKKT
Sbjct: 192 YVKKT 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 24/164 (14%)
Query: 21 KALKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+ L +G GA G+V +D + A PF +S +HAK R E+R
Sbjct: 54 QTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPF------QSIIHAK-----RTYRELR 102
Query: 76 VLSRLSHPFLPKLLG----SLETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+L + H + LL + +EF + V + G DLN + Q + ++F
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFL 159
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+ +I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 203
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETF--------- 297
+V T Y +PE++ H VD W++G + E+L G T F G +
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 298 --------------RNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
RN + P+ F+G DL++++L D KR+
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRI---- 326
Query: 335 GACEIKEHVFF 345
A E H +F
Sbjct: 327 TASEALAHPYF 337
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 40 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 94
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 153
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 154 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 7/153 (4%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG+G+ G V D C A+K++ K L E + EI++L RL H
Sbjct: 12 LLGEGSYGKV----KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 85 LPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLH 142
+ +L+ L E + + + YC G +L R F Y ++I +E+LH
Sbjct: 68 VIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-FPVCQAHGYFCQLIDGLEYLH 126
Query: 143 NMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ GI ++D+KP N+L+ G + ++ ++ L
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 232 VSRRQQSFDNGERSNSFVGTEEYVSPEVVRG--DGHEFAVDWWALGILTYEMLYGTTPFR 289
V+ F + + G+ + PE+ G F VD W+ G+ Y + G PF
Sbjct: 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Query: 290 GKNRKETFRNVLMKTPEFVGQ-RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
G N + F N+ + G L+DL++ +LE +P KR +R +I++H +F+
Sbjct: 215 GDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFS-IR---QIRQHSWFR 268
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARH 174
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
A + H +F D + + P+ S E DL
Sbjct: 298 TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 332
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G++ EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 26/197 (13%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
NL K LG+G G V V A R + V +A R E VL
Sbjct: 24 NLVLGKTLGEGEFGKV--VKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 79 RLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQ-------------------- 117
+++HP + KL G+ D L V Y G L LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 118 -NDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
++R + + + +I +++L M + +RDL NIL+ + + ++DF LSR++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 177 KKTAFEKQSLNNNKFPV 193
++ ++ K+S + PV
Sbjct: 202 EEDSYVKRS--QGRIPV 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRVLSRLS 81
K++G G G V+ + + P A+K TL A + ++R + E ++ + S
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIK-----TLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
H + +L G + + + Y G L+ ++ D FS + L I +++L
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKF-LREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
NM +RDL NIL+ + ++DF LSR L
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L + LK +G GA G V +D + A+K + + + H +RA E+ +
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNV----AIKKLSRPFQNQTHA--KRAYRELVL 76
Query: 77 LSRLSHPFLPKLLG------SLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ ++H + LL SLE + + + V++ + + S +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMS-----YL 131
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
L +++ I+HLH+ GI +RDLKP NI+++ + + DF L+R
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLART 175
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK---- 303
+V T Y +PEV+ G G++ VD W++G + EM+ G F G + + + V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKRLGY 332
+PEF+ + L ++ +E P K GY
Sbjct: 245 SPEFMKK---LQPTVRTYVENRP-KYAGY 269
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
K++G G+ G V+ C V K L K R E++++ +L H
Sbjct: 26 KVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHC 73
Query: 84 FLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSEIIC 136
+ +L G + + +L + Y P V R+ + P + ++ Y+ ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 24 KILGKGAMGTVFLVHDRAADPTAR-CPFALKVVDKSTLHAKHEAERRARW--EIRVLSRL 80
+++G G G V R P R P A+K TL + ++R + E ++ +
Sbjct: 28 RVIGAGEFGEV--CSGRLKLPGKRELPVAIK-----TLKVGYTEKQRRDFLGEASIMGQF 80
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + L G + + + Y G L+ K+ND F+ + L I +++
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF-LKKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L +MG +RDL NILI + ++DF LSR L
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 18/175 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA A+K++ + H++H A E+++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS---ELKI 85
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV-FSPSVIR---- 128
L + H + LLG+ + L V +C G+L+ LR K+N+ V + P +
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 129 ------FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
Y ++ +E L + +RDL NIL+ + V + DF L+R++ K
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 16/169 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 59
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 116
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFE 182
I + +L I +RD+KP NIL+ G + L DF +S L+ + A E
Sbjct: 117 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANE 165
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM 302
E +N FVGT Y+SPE ++G + D W++G+ EM G P E ++
Sbjct: 161 EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVN 220
Query: 303 KTPEFVGQRT---ALTDLIQRLLEKDPVKR 329
+ P + D + + L K+P +R
Sbjct: 221 EPPPKLPSAVFSLEFQDFVNKCLIKNPAER 250
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
K +K+LG GA GTV+ + P A+ + ++T +A + E V++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT---SPKANKEILDEAYVMA 106
Query: 79 RLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 107 SVDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAK 162
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 14 SLDLDNLKALK----------ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAK 63
SLD +L AL+ ++G G G V+ A A+KV+D +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLA----AIKVMDVTG---- 61
Query: 64 HEAERRARWEIRVLSRLSH---------PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLR 114
+ E + EI +L + SH F+ K + D+ L + +C G + L
Sbjct: 62 -DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM--DDQLWLVMEFCGAGSVTDLI 118
Query: 115 YKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
I + EI+ + HLH + +RD+K +N+L+ ++ V L DF +S
Sbjct: 119 KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 175 L 175
L
Sbjct: 179 L 179
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 244 RSNSFVGTEEYVSPEVVRGD-----GHEFAVDWWALGILTYEMLYGTTPF 288
R N+F+GT +++PEV+ D ++F D W+LGI EM G P
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 37/164 (22%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILI-RQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+R Y+ + A++ +H GI +RD+KP N L R+ L DF L+ Q
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA-----------QG 167
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
++ K +L ++ + R +NK + +SRRQQ
Sbjct: 168 THDTKIELLKFVQSEAQQERC--------SQNKCSI---------CLSRRQQVAPRA--- 207
Query: 246 NSFVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPF 288
GT + +PEV+ + A+D W+ G++ +L G PF
Sbjct: 208 ----GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 35 FLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-HPFLPKLLGSLE 93
+ V R FA+K++DKS +R EI +L R HP + L +
Sbjct: 35 YSVCKRCIHKATNMEFAVKIIDKS--------KRDPTEEIEILLRYGQHPNIITLKDVYD 86
Query: 94 TDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDL 151
+++ GG+L +LR K FS L I +E+LH G+ +RDL
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 152 KPENIL-IRQSGH---VTLTDFDLSRNL 175
KP NIL + +SG+ + + DF ++ L
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL 170
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE---- 306
T +V+PEV+ G++ A D W+LG+L Y ML G TPF +T +L +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILARIGSGKFS 241
Query: 307 -----FVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLL 353
+ DL+ ++L DP +RL A + H + V WD L
Sbjct: 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHWDQL 287
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+L GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 75
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 76 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+L GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 80
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 136
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 80
Query: 80 LSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 81 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 136
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 32/201 (15%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K+LG GA G V + A ++ +++V K +ER A E+++
Sbjct: 45 ENLEFGKVLGSGAFGKVM---NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 77 LSRL-SHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRF----- 129
+++L SH + LLG+ + YC GDL N LR K+ FS I +
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREK--FSEDEIEYENQKR 159
Query: 130 ----------YLSEIIC-------AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+++C +E L +RDL N+L+ V + DF L+
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
Query: 173 RNLVKKTAFEKQSLNNNKFPV 193
R+++ + + + N + PV
Sbjct: 220 RDIMSDSNYVVRG--NARLPV 238
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 73
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 74 VDNPHVCRLLGICLTSTVQLITQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 129
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 130 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 167
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + D+ L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 44/228 (19%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D + ++G G+ G V +D+ L+V + + +R R EI +L
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI-----DCKRILR-EIAIL 106
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQND--RVFSPSV------IRF 129
+RL+H + K+L + + + Y VL +D ++F V I+
Sbjct: 107 NRLNHDHVVKVLDIVIPKDVEKFDELYV------VLEIADSDFKKLFRTPVYLTELHIKT 160
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNN 189
L ++ ++++H+ GI +RDLKP N L+ Q V + DF L+R + + N+
Sbjct: 161 LLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV------DYPENGNS 214
Query: 190 KFPV-----------LPVTENPKRHR--RILTRWLHA-----LPENKT 219
+ P+ P T+N KR ++TRW A L EN T
Sbjct: 215 QLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT 262
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 75
Query: 80 LSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+L GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 80
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 81 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 136
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF L++ L
Sbjct: 137 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 75
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 76 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 131
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K L+ LG G TV+ + + T ALK V L ++ A EI ++
Sbjct: 7 FKQLEKLGNGTYATVY----KGLNKTTGVYVALKEVK---LDSEEGTPSTAIREISLMKE 59
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV------FSPSVIRFYLSE 133
L H + +L + T+ L + D ++ +Y + V ++++++ +
Sbjct: 60 LKHENIVRLYDVIHTENKLTLVFEFM---DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ + H I +RDLKP+N+LI + G + L DF L+R
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 246 NSFVGTEEYVSPEVVRGD-GHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV--LM 302
+S V T Y +P+V+ G + ++D W+ G + EM+ G F G N +E + + +M
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM 225
Query: 303 KTP 305
TP
Sbjct: 226 GTP 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF L+R L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVL 197
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 60 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 104
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 83
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 140
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 118
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 175
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 222
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 54 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 98
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 60 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 104
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 35 FLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS-HPFLPKLLGSLE 93
+ V R FA+K++DKS +R EI +L R HP + L +
Sbjct: 35 YSVCKRCIHKATNXEFAVKIIDKS--------KRDPTEEIEILLRYGQHPNIITLKDVYD 86
Query: 94 TDEFLAWAVPYCPGGDL--NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDL 151
+++ GG+L +LR K FS L I +E+LH G+ +RDL
Sbjct: 87 DGKYVYVVTELXKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDL 142
Query: 152 KPENIL-IRQSGH---VTLTDFDLSRNL 175
KP NIL + +SG+ + + DF ++ L
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL 170
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPE---- 306
T +V+PEV+ G++ A D W+LG+L Y L G TPF +T +L +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILARIGSGKFS 241
Query: 307 -----FVGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLL 353
+ DL+ + L DP +RL A + H + V WD L
Sbjct: 242 LSGGYWNSVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHWDQL 287
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 64 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 108
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 62 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 106
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
K +K+LG GA GTV+ + P A+K + ++T +A + E V++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMAS 77
Query: 80 LSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+ +P + +LLG T + + +P+ G L+ +R + D + S ++ + + +I
Sbjct: 78 VDNPHVCRLLGICLTSTVQLIMQLMPF--GCLLDYVR-EHKDNIGSQYLLNWCV-QIAKG 133
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +L + + +RDL N+L++ HV +TDF ++ L
Sbjct: 134 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 171
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 34 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 78
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 139 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 38 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 82
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 105 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 149
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 38 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 82
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 31 KVIGNGSFGVVYQA---------------KLCDSGELVAIKKVLQDKRFKNRELQIMRKL 75
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 45 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 89
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 150 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 27 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 71
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 132 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 75
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 132
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 133 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 179
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPF 288
+NSFVGT Y+SPE ++G + D W++G+ EM G P
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 6 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 55
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSRGSKFPV 170
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 39 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 83
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 144 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 30 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 74
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 135 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 26 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + Y G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF L R L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
K++G G+ G V+ C V K L K R E++++ +L H
Sbjct: 26 KVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHC 73
Query: 84 FLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSEIIC 136
+ +L G + + +L + Y P V R+ + P + ++ Y+ ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 26 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
K++G G+ G V+ C V K L K R E++++ +L H
Sbjct: 26 KVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHC 73
Query: 84 FLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSEIIC 136
+ +L G + + +L + Y P V R+ + P + ++ Y+ ++
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/299 (18%), Positives = 111/299 (37%), Gaps = 89/299 (29%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTA---RCPFALKVVDKSTLHAKHEAERRARWEI 74
D + ++ +G GA G V R + P A VV + +R E+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA---------KRTLREL 104
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVL---------RYKQNDRVFSPS 125
++L H + + + L VPY + V+ + + + +
Sbjct: 105 KILKHFKHDNI------IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE 158
Query: 126 VIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+R++L +++ ++++H+ + +RDLKP N+L+ ++ + + DF ++R L
Sbjct: 159 HVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT-------- 210
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
+P H+ +T
Sbjct: 211 -------------SPAEHQYFMT------------------------------------- 220
Query: 246 NSFVGTEEYVSPEVVRGDGHEF--AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM 302
+V T Y +PE++ HE+ A+D W++G + EML F GKN + ++M
Sbjct: 221 -EYVATRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 26 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
GE + S++ + Y +PE++ G + ++D W+ G + E+L G F G +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 21 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 70
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 128
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E+ S +KFPV
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EETSSVGSKFPV 185
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 113
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
NL K LG+G G V V A R + V +A R E VL
Sbjct: 24 NLVLGKTLGEGEFGKV--VKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 79 RLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQ-------------------- 117
+++HP + KL G+ D L V Y G L LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 118 -NDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
++R + + + +I +++L M + +RDL NIL+ + + ++DF LSR++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 177 KKTAFEKQSLNNNKFPV 193
++ + K+S + PV
Sbjct: 202 EEDSXVKRS--QGRIPV 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + Y P G+
Sbjct: 56 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGN 114
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 115 LLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF 174
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 175 GLSRLMTGDT---YTAHAGAKFPI 195
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 62/178 (34%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSL 186
+R++L +++ ++++H+ + +RDLKP N+L+ ++ + + DF ++R L
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT--------- 211
Query: 187 NNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSN 246
+P H+ +T
Sbjct: 212 ------------SPAEHQYFMTE------------------------------------- 222
Query: 247 SFVGTEEYVSPEVVRGDGHEF--AVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM 302
+V T Y +PE++ HE+ A+D W++G + EML F GKN + ++M
Sbjct: 223 -YVATRWYRAPELMLS-LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 278
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 113
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 113
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 113
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G VF V + P L V+ + +H + + R + E++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHK--------PSGL-VMARKLIHLEIKPAIRNQIIRELQ 56
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAGRI--PEQILGKVSIAV 113
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 114 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 160
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFR 298
+NSFVGT Y+SPE ++G + D W++G+ EM G P + KE R
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSR 213
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 71
Query: 78 SRLSHPFLPKLLGSLETDEFL-----AWAVPYCPGGDLN-VLRYKQNDRVFSPSVIRFYL 131
+ H + LL L + V + G DLN +++ + + ++F +
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK----LTDDHVQFLI 127
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + DF L+R+
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 38/161 (23%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 232
Query: 291 ------------KNRKETFRNVLMKTPE---------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN + + F+G DL++++L D KR
Sbjct: 233 RLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 292
Query: 330 LGYLRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDL 370
+ A + H +F D + + P+ S E DL
Sbjct: 293 I----TAAQALAHAYFAQYH-DPDDEPVADPYDQSFESRDL 328
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G G+ GTV +D A+K++ + HA+ E E+ ++ RL HP +
Sbjct: 45 IGAGSFGTVHRAEWHGSD------VAVKILMEQDFHAERVNEFLR--EVAIMKRLRHPNI 96
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EIICAIEHLHNM 144
+G++ L+ Y G L L +K R R ++ ++ + +LHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 145 G--IAYRDLKPENILIRQSGHVTLTDFDLSR 173
I +RDLK N+L+ + V + DF LSR
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR 187
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDK---STLHAKHEAERRARWEIRVLSR 79
L+ +G GA G V A D A+K + + S L AK RA E+R+L
Sbjct: 30 LQPVGSGAYGAVC----SAVDGRTGAKVAIKKLYRPFQSELFAK-----RAYRELRLLKH 80
Query: 80 LSHPFLPKLLGSLETDEFL------AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
+ H + LL DE L +P+ G DL L + I+F + +
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---LGEDRIQFLVYQ 136
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
++ + ++H GI +RDLKP N+ + + + + DF L+R
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 249 VGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF 307
V T Y +PEV+ + VD W++G + EM+ G T F+G + + + ++ T
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG-- 243
Query: 308 VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVF 344
T + +QR L+ D K Y++G E+++ F
Sbjct: 244 ----TPPAEFVQR-LQSDEAK--NYMKGLPELEKKDF 273
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 12 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 61
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 62 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 119
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPV 176
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
NL K LG+G G V V A R + V +A R E VL
Sbjct: 24 NLVLGKTLGEGEFGKV--VKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 79 RLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQ-------------------- 117
+++HP + KL G+ D L V Y G L LR +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 118 -NDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
++R + + + +I +++L M + +RDL NIL+ + + ++DF LSR++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 177 KKTAFEKQSLNNNKFPV 193
++ + K+S + PV
Sbjct: 202 EEDSXVKRS--QGRIPV 216
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 5 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 54
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 55 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPV 169
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 6 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 55
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 113
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPV 170
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D+ + ++ LG+G VF A + T +K++ K + + + EI++L
Sbjct: 37 DDYQLVRKLGRGKYSEVF----EAINITNNEKVVVKIL-------KPVKKNKIKREIKIL 85
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
L P ++ + + P +N +KQ + + IRFY+ EI+ A
Sbjct: 86 ENLRGG--PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKA 143
Query: 138 IEHLHNMGIAYRDLKPENILI 158
+++ H+MGI +RD+KP N++I
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMI 164
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 47/169 (27%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSL 186
+R ++ A++ LH+ + + DLKPENIL S D++L+ NL
Sbjct: 139 VRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYNL----------- 181
Query: 187 NNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSN 246
E K + KS V V +FD+ E +
Sbjct: 182 -----------------------------EKKRDERSVKSTAVRVVDFGSATFDH-EHHS 211
Query: 247 SFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+ V T Y +PEV+ G D W++G + +E G T F+ + +E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE 260
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N+LI
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 21 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 70
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 71 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 128
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPV 185
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + F L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D +L LK LG G G V + + A+K++ + ++ E E
Sbjct: 1 IDPKDLTFLKELGTGQFGVV-----KYGKWRGQYDVAIKMIKEGSMSEDEFIE-----EA 50
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+V+ LSH L +L G + Y G L N LR ++ F + +
Sbjct: 51 KVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKD 108
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ A+E+L + +RDL N L+ G V ++DF LSR ++ E S +KFPV
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD---EYTSSVGSKFPV 165
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 19/165 (11%)
Query: 26 LGKGAMGTVFLVHDRAADPTA-RCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
LG+GA G VFL PT + A+K + TL A+ + +R A +L+ L H
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE----LLTNLQHEH 78
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRV-------------FSPSVIRFY 130
+ K G + L Y GDLN LR D + S +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
S+I + +L + +RDL N L+ + V + DF +SR++
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV 183
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G TV+ + D ALK + L + A A E+ +L L H +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLV----ALKEI---RLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN-DRVFSPSVIRFYLSEIICAIEHLHNM 144
L + T++ L Y D ++ +Y + + + ++ +L +++ + + H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYL---DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +RDLKP+N+LI + G + L DF L+R
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 41/180 (22%)
Query: 116 KQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ N F I+ Y EI+ A+ +L M + + DLKPENIL+
Sbjct: 128 RNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDP-------------- 173
Query: 176 VKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRR 235
FEK + V VT+ K + +TKS + +
Sbjct: 174 ----YFEKSLIT-----VRRVTDG-----------------KKIQIYRTKSTGIKLIDFG 207
Query: 236 QQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+F + S + T +Y +PEV+ G + + D W+ G + E+ G+ FR E
Sbjct: 208 CATF-KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 21 KALKILGKGAMGTVFLVHDRAADPTARCPFALKVV-DKSTLHAKHEAERRARWEIRVLSR 79
+ LK++GKG+ G V +A D ALK+V ++ H R+A EIR+L
Sbjct: 100 EVLKVIGKGSFGQVV----KAYDHKVHQHVALKMVRNEKRFH------RQAAEEIRILEH 149
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCP-----GGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L + + E + C +L L K + FS ++R + I
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGH--VTLTDFDLS 172
+ ++ LH I + DLKPENIL++Q G + + DF S
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 154 ENILIRQSGHVTLTDFDLSRNL---VKKTAFEKQSLN-NNKFP--VLPVTENPKRHRRIL 207
EN R H+ +T LS NL +KK F+ SL KF +L + ++R I
Sbjct: 166 ENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII- 222
Query: 208 TRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEF 267
PEN LK+ + + + +++ +R + + + Y +PEV+ G +
Sbjct: 223 --HCDLKPENIL-LKQQGRSGIKVIDFGSSCYEH-QRVYTXIQSRFYRAPEVILGARYGM 278
Query: 268 AVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+D W+LG + E+L G G++ +
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGEDEGDQL 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + D L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARH 174
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 21 KALKILGKGAMGTVFLVHDRAADPTARCPFALKVV-DKSTLHAKHEAERRARWEIRVLSR 79
+ LK++GKG+ G V +A D ALK+V ++ H R+A EIR+L
Sbjct: 100 EVLKVIGKGSFGQVV----KAYDHKVHQHVALKMVRNEKRFH------RQAAEEIRILEH 149
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCP-----GGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L + + E + C +L L K + FS ++R + I
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGH--VTLTDFDLS 172
+ ++ LH I + DLKPENIL++Q G + + DF S
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 13/145 (8%)
Query: 154 ENILIRQSGHVTLTDFDLSRNL---VKKTAFEKQSLN-NNKFP--VLPVTENPKRHRRIL 207
EN R H+ +T LS NL +KK F+ SL KF +L + ++R I
Sbjct: 166 ENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII- 222
Query: 208 TRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEF 267
PEN LK+ + + + +++ +R + + + Y +PEV+ G +
Sbjct: 223 --HCDLKPENIL-LKQQGRSGIKVIDFGSSCYEH-QRVYTXIQSRFYRAPEVILGARYGM 278
Query: 268 AVDWWALGILTYEMLYGTTPFRGKN 292
+D W+LG + E+L G G++
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGED 303
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+GA GTV+ D A + + L + + E EI V+ +P +
Sbjct: 28 IGQGASGTVYTAMDVATGQEV-------AIRQMNLQQQPKKELIIN-EILVMRENKNPNI 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
L S + L + Y GG L +V+ D +V R E + A+E LH+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR----ECLQALEFLHSN 135
Query: 145 GIAYRDLKPENILIRQSGHVTLTDF 169
+ +RD+K +NIL+ G V LTDF
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN-RKETFRNVLM 302
+ + VGT +++PEVV + VD W+LGI+ EM+ G P+ +N + +
Sbjct: 172 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 303 KTPEFVGQR---TALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
TPE D + R LE D KR A E+ +H F K
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLEMDVEKR----GSAKELLQHQFLK 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN-RKETFRNVLM 302
+ ++ VGT +++PEVV + VD W+LGI+ EM+ G P+ +N + +
Sbjct: 173 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 303 KTPEFVGQR---TALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
TPE D + R LE D KR A E+ +H F K
Sbjct: 233 GTPELQNPEKLSAIFRDFLNRCLEMDVEKR----GSAKELIQHQFLK 275
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+GA GTV+ D A + + L + + E EI V+ +P +
Sbjct: 29 IGQGASGTVYTAMDVATGQEV-------AIRQMNLQQQPKKELIIN-EILVMRENKNPNI 80
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
L S + L + Y GG L +V+ D +V R E + A+E LH+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR----ECLQALEFLHSN 136
Query: 145 GIAYRDLKPENILIRQSGHVTLTDF 169
+ +R++K +NIL+ G V LTDF
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDF 161
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+GA GTV+ D A + + L + + E EI V+ +P +
Sbjct: 28 IGQGASGTVYTAMDVATGQEV-------AIRQMNLQQQPKKELIIN-EILVMRENKNPNI 79
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
L S + L + Y GG L +V+ D +V R E + A+E LH+
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR----ECLQALEFLHSN 135
Query: 145 GIAYRDLKPENILIRQSGHVTLTDF 169
+ +RD+K +NIL+ G V LTDF
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN-RKETFRNVLM 302
+ ++ VGT +++PEVV + VD W+LGI+ EM+ G P+ +N + +
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231
Query: 303 KTPEFVGQR---TALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
TPE D + R L+ D KR A E+ +H F K
Sbjct: 232 GTPELQNPEKLSAIFRDFLNRCLDMDVEKR----GSAKELLQHQFLK 274
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 121 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 190 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 13 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 67
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + G L+ +++D F+ + L
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLRG 126
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 127 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 168
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 96/333 (28%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRVLSRL-S 81
K LG GA G V + A + A+ V K + H ER A E++VLS L +
Sbjct: 45 KTLGAGAFGKVV---EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFS---PSVIRF-------- 129
H + LLG+ YC GDL N LR K++ + S P+++
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 130 ----YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ + L + +RDL NIL+ + DF L+R++
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK--------- 212
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
N++ + V K + R+ +W+
Sbjct: 213 -NDSNYVV-------KGNARLPVKWM---------------------------------- 230
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRG--------KNRKET 296
+PE + + F D W+ GI +E+ G++P+ G K KE
Sbjct: 231 ----------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 280
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
FR M +PE + D+++ + DP+KR
Sbjct: 281 FR---MLSPEHAPAE--MYDIMKTCWDADPLKR 308
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 115 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 96/333 (28%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRVLSRL-S 81
K LG GA G V + A + A+ V K + H ER A E++VLS L +
Sbjct: 29 KTLGAGAFGKVV---EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFS---PSVIRF-------- 129
H + LLG+ YC GDL N LR K++ + S P+++
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 130 ----YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ + L + +RDL NIL+ + DF L+R++
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK--------- 196
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
N++ + V K + R+ +W+
Sbjct: 197 -NDSNYVV-------KGNARLPVKWM---------------------------------- 214
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRG--------KNRKET 296
+PE + + F D W+ GI +E+ G++P+ G K KE
Sbjct: 215 ----------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
FR M +PE + D+++ + DP+KR
Sbjct: 265 FR---MLSPEHAPAE--MYDIMKTCWDADPLKR 292
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-- 72
+D+ +K +++G G G V H + P R F V TL + + ++R +
Sbjct: 30 IDISCVKIEQVIGAGEFGEVCSGHLKL--PGKREIF----VAIKTLKSGYTEKQRRDFLS 83
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E ++ + HP + L G + + + G L+ +QND F+ + L
Sbjct: 84 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF-LRQNDGQFTVIQLVGMLR 142
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I +++L +M +RDL NIL+ + ++DF LSR L T+
Sbjct: 143 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+GA GTV+ D A + + L + + E EI V+ +P +
Sbjct: 29 IGQGASGTVYTAMDVATGQEV-------AIRQMNLQQQPKKELIIN-EILVMRENKNPNI 80
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
L S + L + Y GG L +V+ D +V R E + A+E LH+
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR----ECLQALEFLHSN 136
Query: 145 GIAYRDLKPENILIRQSGHVTLTDF 169
+ +RD+K +NIL+ G V LTDF
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDF 161
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN-RKETFRNVLM 302
+ + VGT +++PEVV + VD W+LGI+ EM+ G P+ +N + +
Sbjct: 173 KRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 232
Query: 303 KTPEFVGQR---TALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
TPE D + R LE D KR A E+ +H F K
Sbjct: 233 GTPELQNPEKLSAIFRDFLNRCLEMDVEKR----GSAKELIQHQFLK 275
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 115 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 116 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 185 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW---EIRVLSRL 80
K++G G+ G V+ K+ D L A + + R+ E++++ +L
Sbjct: 26 KVIGNGSFGVVY---------------QAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 81 SHPFLPKL------LGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV-IRFYLSE 133
H + +L G + +L + Y P V R+ + P + ++ Y+ +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHV-TLTDFDLSRNLVK 177
+ ++ ++H+ GI +RD+KP+N+L+ V L DF ++ LV+
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+N +KQ + + IRFY+ EI+ A+++ H+MGI +RD+KP N++I
Sbjct: 114 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 242 GERSNSFVGTEEYVSPEV-VRGDGHEFAVDWWALGILTYEMLYGTTPF 288
G+ N V + + PE+ V +++++D W+LG + M++ PF
Sbjct: 183 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD N+ K++G G G V R P+ + + V K+ E +RR E
Sbjct: 42 LDATNISIDKVVGAGEFGEV--CSGRLKLPSKK---EISVAIKTLKVGYTEKQRRDFLGE 96
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + +L G + + + G L+ +++D F+ + L
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLRG 155
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +MG +RDL NILI + ++DF LSR L
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + D L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 37/136 (27%)
Query: 243 ERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG----------- 290
+ +V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 236
Query: 291 ------------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKR 329
K E+ RN L + P+ F+G DL++++L D KR
Sbjct: 237 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 296
Query: 330 LGYLRGACEIKEHVFF 345
+ A + H +F
Sbjct: 297 I----TAAQALAHAYF 308
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 96/333 (28%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRVLSRL-S 81
K LG GA G V + A + A+ V K + H ER A E++VLS L +
Sbjct: 47 KTLGAGAFGKVV---EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFS---PSVIRF-------- 129
H + LLG+ YC GDL N LR K++ + S P+++
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 130 ----YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ + L + +RDL NIL+ + DF L+R++
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK--------- 214
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
N++ + V K + R+ +W+
Sbjct: 215 -NDSNYVV-------KGNARLPVKWM---------------------------------- 232
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRG--------KNRKET 296
+PE + + F D W+ GI +E+ G++P+ G K KE
Sbjct: 233 ----------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 282
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
FR M +PE + D+++ + DP+KR
Sbjct: 283 FR---MLSPEHAPAE--MYDIMKTCWDADPLKR 310
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 96/333 (28%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRVLSRL-S 81
K LG GA G V + A + A+ V K + H ER A E++VLS L +
Sbjct: 52 KTLGAGAFGKVV---EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFS---PSVIRF-------- 129
H + LLG+ YC GDL N LR K++ + S P+++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 130 ----YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ + L + +RDL NIL+ + DF L+R++
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIK--------- 219
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
N++ + V K + R+ +W+
Sbjct: 220 -NDSNYVV-------KGNARLPVKWM---------------------------------- 237
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRG--------KNRKET 296
+PE + + F D W+ GI +E+ G++P+ G K KE
Sbjct: 238 ----------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
FR M +PE + D+++ + DP+KR
Sbjct: 288 FR---MLSPEHAPAE--MYDIMKTCWDADPLKR 315
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G + + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 304 TP-----EFVGQRTALTDLIQRLLEKDPVKR 329
P G L ++ + L K+P R
Sbjct: 235 DPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 18 EILGFGGMSEVHL----ARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 73 AIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NI+I + V + DF ++R N V +TA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 23 LKILGKGAMGTVFLVHD-----RAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
L +G GA G+V D R A PF +S +HAK R E+R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAK-----RTYRELRLL 75
Query: 78 SRLSHPFLPKLLGSL----ETDEFL-AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
+ H + LL +EF + V + G DLN + Q + ++F +
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+I+ ++++H+ I +RDLKP N+ + + + + D L+R+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARH 174
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 37/131 (28%)
Query: 248 FVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRG---------------- 290
+V T Y +PE++ H VD W++G + E+L G T F G
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 291 -------KNRKETFRNV---LMKTPE------FVGQRTALTDLIQRLLEKDPVKRLGYLR 334
K E+ RN L + P+ F+G DL++++L D KR+
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI---- 297
Query: 335 GACEIKEHVFF 345
A + H +F
Sbjct: 298 TAAQALAHAYF 308
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 18 EILGFGGMSEVHL----ARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 73 AIVAVYATGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NI+I + V + DF ++R N V +TA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 18 EILGFGGMSEVHL----ARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 73 AIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NI+I + V + DF ++R N V +TA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 18 EILGFGGMSEVHL----ARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 73 AIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NI+I + V + DF ++R N V +TA
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 18 EILGFGGMSEVHL----ARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 72
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 73 AIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NILI + V + DF ++R N V +TA
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTA 177
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWE 73
++ + L +G+G G VF R KV K L + K A E
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEKEGFPITALRE 67
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPY--CPGGDLNVLRYKQNDR--VFSPSVIRF 129
I++L L H + L+ T A PY C G V + ++D + S +++F
Sbjct: 68 IKILQLLKHENVVNLIEICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF 122
Query: 130 YLSEI-------ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
LSEI + + ++H I +RD+K N+LI + G + L DF L+R
Sbjct: 123 TLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G G+ GTV +D A+K++ + HA+ E E+ ++ RL HP +
Sbjct: 45 IGAGSFGTVHRAEWHGSD------VAVKILMEQDFHAERVNEFLR--EVAIMKRLRHPNI 96
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EIICAIEHLHNM 144
+G++ L+ Y G L L +K R R ++ ++ + +LHN
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 145 G--IAYRDLKPENILIRQSGHVTLTDFDLSR 173
I +R+LK N+L+ + V + DF LSR
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187
Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKT 304
S S GT E+++PEV+R + D ++ G++ +E+ P+ N + V K
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 305 PEFVGQRT---ALTDLIQRLLEKDPVKRLGY 332
R + +I+ +P KR +
Sbjct: 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSF 286
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 96/333 (28%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRVLSRL-S 81
K LG GA G V + A + A+ V K + H ER A E++VLS L +
Sbjct: 52 KTLGAGAFGKVV---EATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFS---PSVIRF-------- 129
H + LLG+ YC GDL N LR K++ + S P+++
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 130 ----YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ + L + +RDL NIL+ + DF L+R++
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIK--------- 219
Query: 186 LNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERS 245
N++ + V K + R+ +W+
Sbjct: 220 -NDSNYVV-------KGNARLPVKWM---------------------------------- 237
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRG--------KNRKET 296
+PE + + F D W+ GI +E+ G++P+ G K KE
Sbjct: 238 ----------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
FR M +PE + D+++ + DP+KR
Sbjct: 288 FR---MLSPEHAPAE--MYDIMKTCWDADPLKR 315
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
++ L+ +G+G G V+ + + FALK K L + E EI
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-----FALK---KIRLEKEDEGIPSTTIREIS 52
Query: 76 VLSRLSHPFLPKLLGSLET-----------DEFLAWAVPYCPGGDLNVLRYKQNDRVFSP 124
+L L H + KL + T D+ L + C GG
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LES 99
Query: 125 SVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +L +++ I + H+ + +RDLKP+N+LI + G + + DF L+R
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 18/160 (11%)
Query: 21 KALKILGKGAMGTVFLVHDRAADPTARCPFALKVV-DKSTLHAKHEAERRARWEIRVLSR 79
+ LK++GKG G V +A D ALK+V ++ H R+A EIR+L
Sbjct: 100 EVLKVIGKGXFGQVV----KAYDHKVHQHVALKMVRNEKRFH------RQAAEEIRILEH 149
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCP-----GGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L + + E + C +L L K + FS ++R + I
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGH--VTLTDFDLS 172
+ ++ LH I + DLKPENIL++Q G + + DF S
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 154 ENILIRQSGHVTLTDFDLSRNL---VKKTAFEKQSLN-NNKFP--VLPVTENPKRHRRIL 207
EN R H+ +T LS NL +KK F+ SL KF +L + ++R I
Sbjct: 166 ENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII- 222
Query: 208 TRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEF 267
PEN LK+ + + + +++ +R + + Y +PEV+ G +
Sbjct: 223 --HCDLKPENIL-LKQQGRSGIKVIDFGSSCYEH-QRVYXXIQSRFYRAPEVILGARYGM 278
Query: 268 AVDWWALGILTYEMLYGTTPFRGKN 292
+D W+LG + E+L G G++
Sbjct: 279 PIDMWSLGCILAELLTGYPLLPGED 303
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 73 EIRVLSRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVF--SPSVI 127
E+ +L L HP + + + T+ L + YC GGDL +V+ +R + V+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 128 RFYLSEIICAIEHLHNMG-----IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFE 182
R ++++ A++ H + +RDLKP N+ + +V L DF L+R L T+F
Sbjct: 115 RV-MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 183 K 183
K
Sbjct: 174 K 174
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+ +FVGT Y+SPE + + D W+LG L YE+ PF ++KE
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
++ L+ +G+G G V+ + + FALK K L + E EI
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-----FALK---KIRLEKEDEGIPSTTIREIS 52
Query: 76 VLSRLSHPFLPKLLGSLET-----------DEFLAWAVPYCPGGDLNVLRYKQNDRVFSP 124
+L L H + KL + T D+ L + C GG
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LES 99
Query: 125 SVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +L +++ I + H+ + +RDLKP+N+LI + G + + DF L+R
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L+ +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 48 LQYIGEGAYGMV----SSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLR-EIQILLRFRH 100
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + L A Y + YK + S I ++L +I+ ++++
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYI 160
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+LI + + + DF L+R
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 249 VGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 73 EIRVLSRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVF--SPSVI 127
E+ +L L HP + + + T+ L + YC GGDL +V+ +R + V+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 128 RFYLSEIICAIEHLHNMG-----IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFE 182
R ++++ A++ H + +RDLKP N+ + +V L DF L+R L T+F
Sbjct: 115 RV-MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 183 K 183
K
Sbjct: 174 K 174
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+ +FVGT Y+SPE + + D W+LG L YE+ PF ++KE
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKN 292
++ + +GT +Y+SPE RGD + D ++LG + YE+L G PF G +
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 240
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
+ILG G M V L A D A+KV+ ++ L R R E + + L+HP
Sbjct: 35 EILGFGGMSEVHL----ARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHP 89
Query: 84 FLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL-- 141
+ + + E E A +PY ++ + + P + + I A + L
Sbjct: 90 AIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 142 -HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR------NLVKKTA 180
H GI +RD+KP NI+I + V + DF ++R N V +TA
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + + + G+
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 93
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + S V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 94 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 153
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 154 GLSRLMTGDTX---TAHAGAKFPI 174
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE- 233
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 234 -GCPEKVYELMRACWQWNPSDR 254
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
++ L+ +G+G G V+ + + FALK K L + E EI
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGET-----FALK---KIRLEKEDEGIPSTTIREIS 52
Query: 76 VLSRLSHPFLPKLLGSLET-----------DEFLAWAVPYCPGGDLNVLRYKQNDRVFSP 124
+L L H + KL + T D+ L + C GG
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LES 99
Query: 125 SVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +L +++ I + H+ + +RDLKP+N+LI + G + + DF L+R
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI-RQSGHVTLTD 168
+N +KQ ++ + IRFY+ E++ A+++ H+ GI +RD+KP N++I Q + L D
Sbjct: 122 INNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLID 181
Query: 169 FDLS 172
+ L+
Sbjct: 182 WGLA 185
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADP---TARCPFALKVVDKSTLHAKHEAERRARWEIR 75
L+ LK+LG G GTV H P + + P +KV++ + +A +
Sbjct: 14 ELRKLKVLGSGVFGTV---HKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD---HML 67
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
+ L H + +LLG L L Y P G L + +Q+ P ++ + +I
Sbjct: 68 AIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSL-LDHVRQHRGALGPQLLLNWGVQIA 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +L G+ +R+L N+L++ V + DF ++
Sbjct: 126 KGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADP---TARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
L+ LK+LG G GTV H P + + P +KV++ + +A +
Sbjct: 33 LRKLKVLGSGVFGTV---HKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD---HMLA 86
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
+ L H + +LLG L L Y P G L + +Q+ P ++ + +I
Sbjct: 87 IGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSL-LDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+ +L G+ +R+L N+L++ V + DF ++
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI-RQSGHVTLTD 168
+N +KQ ++ + IRFY+ E++ A+++ H+ GI +RD+KP N++I Q + L D
Sbjct: 117 INNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLID 176
Query: 169 FDLS 172
+ L+
Sbjct: 177 WGLA 180
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWEIRVLSRL 80
L +G+G G VF R KV K L + K A EI++L L
Sbjct: 23 LAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 81 SHPFLPKLLGSLETDEFLAWAVPY--CPGGDLNVLRYKQNDR--VFSPSVIRFYLSEI-- 134
H + L+ T A PY C G V + ++D + S +++F LSEI
Sbjct: 75 KHENVVNLIEICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 135 -----ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ + ++H I +RD+K N+LI + G + L DF L+R
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 119 DRVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
D+V P V I+ + +++ ++ LH+ + +RDLKP+NIL+ SG + L DF L+R
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
S V T Y +PEV+ + VD W++G + EM FRG + + +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWEIRVLSRL 80
L +G+G G VF R KV K L + K A EI++L L
Sbjct: 22 LAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 81 SHPFLPKLLGSLETDEFLAWAVPY--CPGGDLNVLRYKQNDR--VFSPSVIRFYLSEI-- 134
H + L+ T A PY C G V + ++D + S +++F LSEI
Sbjct: 74 KHENVVNLIEICRTK-----ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 135 -----ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ + ++H I +RD+K N+LI + G + L DF L+R
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 119 DRVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
D+V P V I+ + +++ ++ LH+ + +RDLKP+NIL+ SG + L DF L+R
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
S V T Y +PEV+ + VD W++G + EM FRG + + +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 119 DRVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
D+V P V I+ + +++ ++ LH+ + +RDLKP+NIL+ SG + L DF L+R
Sbjct: 110 DKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 168
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 246 NSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
S V T Y +PEV+ + VD W++G + EM FRG + + +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 48 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 100
Query: 83 PFLPKLLGSLE--TDEFL--AWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
+ + + T E + + V + G DL L Q+ S I ++L +I+ +
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGL 157
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+++H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 192
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + + + G+
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + S V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 156 GLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 235
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 -GCPEKVYELMRACWQWNPSDR 256
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 15 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 128
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 170
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 214
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRT 312
EY +PEV + D A D W+LG L Y +L G PF + ++ N++ E+
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM--NAEYTFDEE 225
Query: 313 AL-------TDLIQRLLEKDPVKRLGYLRGACEIKEHVFFKGVRWDLLTDVLR 358
A D + RLL K+ R+ A E +H + K + T V+R
Sbjct: 226 AFKEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLKQKIERVSTKVIR 274
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V R + +++ + K V K + + EI +L+ H +
Sbjct: 13 LGRGEFGIV----HRCVETSSKKTYMAKFVK-----VKGTDQVLVKKEISILNIARHRNI 63
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL----NVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
L S E+ E L + G D+ N ++ N+R I Y+ ++ A++ L
Sbjct: 64 LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNERE-----IVSYVHQVCEALQFL 118
Query: 142 HNMGIAYRDLKPENIL--IRQSGHVTLTDFDLSRNL 175
H+ I + D++PENI+ R+S + + +F +R L
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + + + G+
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 95
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + S V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 96 LLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 156 GLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEFV 308
+ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-- 235
Query: 309 GQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 91
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 92 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 146
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 147 LVKVADFGLSRLMTGDTX---TAHAGAKFPI 174
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEFV 308
+ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE-- 233
Query: 309 GQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 234 GCPEKVYELMRACWQWNPSDR 254
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 134 IICAIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I+ A+EHLH+ + + +RD+KP N+LI G V + DF +S LV A
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIR 75
D+ + + LG G G V V R P L ++ + +H + + R + E++
Sbjct: 16 DDFERISELGAGNGGVVTKVQHR--------PSGL-IMARKLIHLEIKPAIRNQIIRELQ 66
Query: 76 VLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS-EI 134
VL + P++ G+ +D ++ + + GG L+ + K+ R+ P I +S +
Sbjct: 67 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKEAKRI--PEEILGKVSIAV 123
Query: 135 ICAIEHL-HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+ + +L I +RD+KP NIL+ G + L DF +S L+ A
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 170
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+NSFVGT Y++PE ++G + D W++G+ E+ G P + KE
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 46 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYK-------QNDRVFSPSVI 127
+S L H + LLG+ + YC GDL N LR K ++ R +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 128 RFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSRNLVKKTAFEKQSL 186
+ S++ + L + +RD+ N+L+ +GHV + DF L+R+++ + + +
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKG- 220
Query: 187 NNNKFPV 193
N + PV
Sbjct: 221 -NARLPV 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 8/180 (4%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
LD +K +++G G G V R P R + V K+ E +RR E
Sbjct: 40 LDASCIKIERVIGAGEFGEV--CSGRLKLPGKR---DVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
++ + HP + L G + + + + + G L+ +++D F+ + L
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF-LRKHDGQFTVIQLVGMLRG 153
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
I + +L +MG +RDL NIL+ + ++DF LSR +++ + K PV
Sbjct: 154 IAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPEAVYTTTGGKIPV 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 93
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 94 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 148
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 149 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 235
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 -GCPEKVYELMRACWQWNPSDR 256
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 16 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 129
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 171
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 93
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 94 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 148
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 149 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEFV 308
+ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-- 235
Query: 309 GQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 GCPEKVYELMRACWQWNPSDR 256
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 215 PENKTGLKKTKSA--RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A +++ +++ N ++ + T YV+PEV+ + ++ + D W
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSCDMW 213
Query: 273 ALGILTYEMLYGTTPFR---------GKNRKETFRNVLMKTPEFVGQRTALTDLIQRLLE 323
+LG++ Y +L G PF G R+ PE+ LI+ LL+
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLK 273
Query: 324 KDPVKRL 330
DP +RL
Sbjct: 274 TDPTERL 280
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 107 GGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI---RQSGH 163
GG+L ++ D+ F+ + +I AI+ LH+ IA+RD+KPEN+L +
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169
Query: 164 VTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRW 210
+ LTDF ++ + Q+ + V P P+++ + W
Sbjct: 170 LKLTDFGFAKETTQNAL---QTPCYTPYYVAPEVLGPEKYDKSCDMW 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 15 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 70
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 128
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 170
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 215 PENKTGLKKTKSA--RVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWW 272
PEN K K A +++ +++ N ++ + T YV+PEV+ + ++ + D W
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY--TPYYVAPEVLGPEKYDKSCDMW 194
Query: 273 ALGILTYEMLYGTTPFR---------GKNRKETFRNVLMKTPEFVGQRTALTDLIQRLLE 323
+LG++ Y +L G PF G R+ PE+ LI+ LL+
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLK 254
Query: 324 KDPVKRL 330
DP +RL
Sbjct: 255 TDPTERL 261
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 107 GGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI---RQSGH 163
GG+L ++ D+ F+ + +I AI+ LH+ IA+RD+KPEN+L +
Sbjct: 91 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 150
Query: 164 VTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRHRRILTRW 210
+ LTDF ++ + Q+ + V P P+++ + W
Sbjct: 151 LKLTDFGFAKETTQNAL---QTPCYTPYYVAPEVLGPEKYDKSCDMW 194
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 100/294 (34%), Gaps = 75/294 (25%)
Query: 15 LDLDNLKALKILGKGAMGTV---FLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR 71
+D L +I+G G G V F + D A AR + R
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAAR---------HDPDEDISQTIENVR 54
Query: 72 WEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
E ++ + L HP + L G + L + + GG LN R R+ P ++ +
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN--RVLSGKRI-PPDILVNWA 111
Query: 132 SEIICAIEHLHNMGIA---YRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNN 188
+I + +LH+ I +RDLK NILI Q + + DLS ++K T F
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQK----VENGDLSNKILKITDF------- 160
Query: 189 NKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSF 248
+ W + G A ++P R F G
Sbjct: 161 ----------------GLAREWHRTTKMSAAG----AYAWMAPEVIRASMFSKGS----- 195
Query: 249 VGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLM 302
D W+ G+L +E+L G PFRG + V M
Sbjct: 196 ---------------------DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 98
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 99 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 153
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 154 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 181
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 240
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 241 -GCPEKVYELMRACWQWNPSDR 261
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 134 IICAIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I+ A+EHLH+ + + +RD+KP N+LI G V + DF +S LV A
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA 165
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 91
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 92 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 146
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR L+ F + KFP+
Sbjct: 147 LVKVADFGLSR-LMTGDTFTAHA--GAKFPI 174
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEFV 308
+ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPE-- 233
Query: 309 GQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 234 GCPEKVYELMRACWQWNPSDR 254
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ + P A+K V+K + E R E+ +L ++S
Sbjct: 14 LLGSGGFGSVY----SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 69
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 127
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 169
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 38 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 93
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 151
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 193
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS---H 82
+G GA GTV+ +A DP + ALK V + + E+ +L RL H
Sbjct: 12 IGVGAYGTVY----KARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 83 PFLPKLLGSLETD----EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
P + +L+ T E V DL K I+ + + + +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFE 182
+ LH I +RDLKPENIL+ G V L DF L+R + A +
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD 169
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 88/203 (43%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 60
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 61 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 120
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ + +
Sbjct: 121 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY- 179
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 180 -TPYYVAPEVLGPEKYDKSCDMW 201
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 16 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 129
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 171
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 17/187 (9%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 38 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYK-------QNDRVFSPSVI 127
+S L H + LLG+ + YC GDL N LR K ++ R +
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 128 RFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSRNLVKKTAFEKQSL 186
+ S++ + L + +RD+ N+L+ +GHV + DF L+R+++ + + +
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKG- 212
Query: 187 NNNKFPV 193
N + PV
Sbjct: 213 -NARLPV 218
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 58 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 171
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 213
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 257
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + + + G+
Sbjct: 38 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 96
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + + V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 97 LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 157 GLSRLMTGDTX---TAHAGAKFPI 177
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 236
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 237 -GCPEKVYELMRACWQWNPSDR 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ + P A+K V+K + E R E+ +L ++S
Sbjct: 11 LLGSGGFGSVY----SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 124
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 166
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 26/167 (15%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCP------FALKVVDKSTLHAKHEAERRARWEIRVLSR 79
LG+GA G VFL A+ CP A+K + ++ +A+ + R A +L+
Sbjct: 21 LGEGAFGKVFL-----AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE----LLTN 71
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVF----------SPSVIR 128
L H + K G + L Y GDLN LR D V + S +
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+I + +L + +RDL N L+ ++ V + DF +SR++
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 16 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 71
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 129
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 171
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ + P A+K V+K + E R E+ +L ++S
Sbjct: 11 LLGSGGFGSVY----SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 124
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 166
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 30 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 143
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 185
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 229
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ + P A+K V+K + E R E+ +L ++S
Sbjct: 11 LLGSGGFGSVY----SGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 124
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 166
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 31 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 144
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 186
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 230
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 43 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 156
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 198
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 31 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 144
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 186
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 23/178 (12%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
++++L+ L +G G G V+ + R A+K + +S E +R ++
Sbjct: 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHV----IAVKQMRRS---GNKEENKRILMDLD 75
Query: 76 VLSRLSH--PFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
V+ + SH P++ + G+ TD F+A + + K R+ P R
Sbjct: 76 VVLK-SHDCPYIVQCFGTFITNTDVFIAMEL-------MGTCAEKLKKRMQGPIPERILG 127
Query: 132 SEIICAIEHLHNM----GIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
+ ++ L+ + G+ +RD+KP NIL+ + G + L DF +S LV A ++ +
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 240 DNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRG-KNRKETFR 298
D +++ E P+ + D ++ D W+LGI E+ G P++ K E
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPD-YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240
Query: 299 NVLMKTPEF----VGQRTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
VL + P +G ++ L KD KR Y + + EH F K
Sbjct: 241 KVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNK----LLEHSFIK 288
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 31 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 86
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 144
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 186
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 230
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 58 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 113
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 171
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 213
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 257
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDK-------STLHAKHEAE 67
+D +K K++G G G V C LKV K TL A + +
Sbjct: 26 IDASCIKIEKVIGVGEFGEV-------------CSGRLKVPGKREICVAIKTLKAGYTDK 72
Query: 68 RRARW--EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPS 125
+R + E ++ + HP + L G + + + Y G L+ ++ND F+
Sbjct: 73 QRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVI 131
Query: 126 VIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ L I +++L +M +RDL NIL+ + ++DF +SR L
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 50 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 105
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 163
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 205
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 249
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS---H 82
+G GA GTV+ +A DP + ALK V + + E+ +L RL H
Sbjct: 12 IGVGAYGTVY----KARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 83 PFLPKLLGSLETD----EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
P + +L+ T E V DL K I+ + + + +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ LH I +RDLKPENIL+ G V L DF L+R
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 43 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 156
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 198
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 242
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 63 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 118
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 176
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 218
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 262
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS---H 82
+G GA GTV+ +A DP + ALK V + + E+ +L RL H
Sbjct: 12 IGVGAYGTVY----KARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 83 PFLPKLLGSLETD----EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
P + +L+ T E V DL K I+ + + + +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 139 EHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ LH I +RDLKPENIL+ G V L DF L+R
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 160
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 68
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 69 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 128
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 129 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 187
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 188 -TPYYVAPEVLGPEKYDKSCDMW 209
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 247
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 248 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 276
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 44 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 157
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 199
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 43 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 156
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 198
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 242
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 43 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 98
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 156
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 198
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 242
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 44 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 157
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 199
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 243
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 30 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 85
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 143
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 185
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 44 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 157
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 199
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 243
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 76
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 77 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 136
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 137 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 195
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 196 -TPYYVAPEVLGPEKYDKSCDMW 217
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 255
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 256 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR--WEIRVLSRLSH 82
+LG G G+V+ R +D P A+K V+K + E R E+ +L ++S
Sbjct: 44 LLGSGGFGSVY-SGIRVSD---NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 99
Query: 83 PF--LPKLLGSLE-TDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIE 139
F + +LL E D F+ P DL + + R + +++ A+
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDL--FDFITERGALQEELARSFFWQVLEAVR 157
Query: 140 HLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 199
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 243
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 46 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYK----QNDRVF-------S 123
+S L H + LLG+ + YC GDL N LR K + D F S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSRNLVKKTAFE 182
+ + S++ + L + +RD+ N+L+ +GHV + DF L+R+++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYI 221
Query: 183 KQSLNNNKFPV 193
+ N + PV
Sbjct: 222 VKG--NARLPV 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 46 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYK----QNDRVF-------S 123
+S L H + LLG+ + YC GDL N LR K + D F S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 124 PSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSRNLVKKTAFE 182
+ + S++ + L + +RD+ N+L+ +GHV + DF L+R+++ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLARDIMNDSNYI 221
Query: 183 KQSLNNNKFPV 193
+ N + PV
Sbjct: 222 VKG--NARLPV 230
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 15/180 (8%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHP 83
++LGKG G+V + D + A+K++ K+ + A + E R E + HP
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSF-VKVAVKML-KADIIASSDIEEFLR-EAACMKEFDHP 85
Query: 84 FLPKLLG-SLETDE-----FLAWAVPYCPGGDLNVL----RYKQNDRVFSPSVIRFYLSE 133
+ KL+G SL + +P+ GDL+ R +N + ++ +
Sbjct: 86 HVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVD 145
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
I C +E+L + +RDL N ++ + V + DF LSR + + + +K PV
Sbjct: 146 IACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC--ASKLPV 203
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 66
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 67 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 126
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 127 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 185
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 186 -TPYYVAPEVLGPEKYDKSCDMW 207
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 245
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 246 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 274
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 67
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 68 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 127
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 128 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 186
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 187 -TPYYVAPEVLGPEKYDKSCDMW 208
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 246
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 247 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 275
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH- 82
++LG G G V + ++ FALK++ +AR E+ + R S
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVELHWRASQC 120
Query: 83 PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
P + +++ E + L + GG+L + D+ F+ + I AI
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 139 EHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
++LH++ IA+RD+KPEN+L R + + LTDF ++ + + V P
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAP 238
Query: 196 VTENPKRHRRILTRW 210
P+++ + W
Sbjct: 239 EVLGPEKYDKSCDMW 253
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 291
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 292 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 320
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 62
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 181
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 182 -TPYYVAPEVLGPEKYDKSCDMW 203
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 60
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 61 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 120
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 121 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 179
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 180 -TPYYVAPEVLGPEKYDKSCDMW 201
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 240 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTAR-CPFALKVVDKSTLHAKHEAERRARW- 72
+D +K K++G G G V R P R A+K TL A + ++R +
Sbjct: 11 IDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREICVAIK-----TLKAGYTDKQRRDFL 63
Query: 73 -EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
E ++ + HP + L G + + + Y G L+ ++ND F+ + L
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVIQLVGML 122
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +M +RDL NIL+ + ++DF +SR L
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 166
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 62
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 181
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 182 -TPYYVAPEVLGPEKYDKSCDMW 203
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 241
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 242 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 4/144 (2%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGD 109
++L V K+ E E + E V+ + HP L +LLG + + + G+
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGN 100
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L + N + + V+ + ++I A+E+L +RDL N L+ ++ V + DF
Sbjct: 101 LLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 160
Query: 170 DLSRNLVKKTAFEKQSLNNNKFPV 193
LSR + T + KFP+
Sbjct: 161 GLSRLMTGDTY---TAHAGAKFPI 181
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 240
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 241 -GCPEKVYELMRACWQWNPSDR 261
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 23/195 (11%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH- 82
++LG G G V + ++ FALK++ +AR E+ + R S
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVELHWRASQC 114
Query: 83 PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAI 138
P + +++ E + L + GG+L + D+ F+ + I AI
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 139 EHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLP 195
++LH++ IA+RD+KPEN+L R + + LTDF ++ + + V P
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAP 232
Query: 196 VTENPKRHRRILTRW 210
P+++ + W
Sbjct: 233 EVLGPEKYDKSCDMW 247
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 286 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 314
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTAR-CPFALKVVDKSTLHAKHEAERRARW- 72
+D +K K++G G G V R P R A+K TL A + ++R +
Sbjct: 5 IDASCIKIEKVIGVGEFGEV--CSGRLKVPGKREICVAIK-----TLKAGYTDKQRRDFL 57
Query: 73 -EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYL 131
E ++ + HP + L G + + + Y G L+ ++ND F+ + L
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVIQLVGML 116
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
I +++L +M +RDL NIL+ + ++DF +SR L
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL 160
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 61
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 62 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 121
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 122 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 180
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 181 -TPYYVAPEVLGPEKYDKSCDMW 202
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 240
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
PE+ + LI+ LL+ +P +R+
Sbjct: 241 FPNPEWSEVSEEVKMLIRNLLKTEPTQRM 269
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 15 LDLDNLKALKI-LGKGAMGTV----FLVHDRAADPTARCPFALKVVDKSTLHAKHEAERR 69
L DNL I LG G G+V + + + D A+KV+ + T A E R
Sbjct: 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID------VAIKVLKQGTEKADTEEMMR 59
Query: 70 ARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF 129
E +++ +L +P++ +L+G + E L + GG L+ + + + +V
Sbjct: 60 ---EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 115
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L ++ +++L +RDL N+L+ + ++DF LS+ L
Sbjct: 116 -LHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
D+L+ + LG+GA G +V P+ + + V + + ++R ++ +
Sbjct: 34 DDLEPIXELGRGAYG---VVEKXRHVPSGQ----IXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 78 SR-LSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDLNVLRYKQ---NDRVFSPSVIRFYL 131
R + PF G+L E D W L+ YKQ + ++
Sbjct: 87 XRTVDCPFTVTFYGALFREGD---VWICXELXDTSLDKF-YKQVIDKGQTIPEDILGKIA 142
Query: 132 SEIICAIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I+ A+EHLH+ + + +RD+KP N+LI G V DF +S LV A
Sbjct: 143 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA 192
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+++K +K LG G G V++ + + A +K + T+ + E E ++
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVA-----VKTLKPGTMSVQAFLE-----EANLM 62
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIIC 136
L H L +L + +E + Y G L + L+ + +V P +I F ++I
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAE 121
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ +RDL+ N+L+ +S + DF L+R + E + KFP+
Sbjct: 122 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN---EYTAREGAKFPI 175
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRGKNRKETF 297
++ +PE + D W+ GIL YE++ YG P+ G+ +
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 73 EIRVLSRLSHPFLPKLLGSL--ETDEFLAWAVPYCPGGDL-NVLRYKQNDRVF--SPSVI 127
E+ +L L HP + + + T+ L + YC GGDL +V+ +R + V+
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 128 RFYLSEIICAIEHLHNMG-----IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFE 182
R ++++ A++ H + +RDLKP N+ + +V L DF L+R L F
Sbjct: 115 RV-MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 183 KQSLNNNKFPVLPVTENPKRHRRI 206
K+ F P +P++ R+
Sbjct: 174 KE------FVGTPYYMSPEQMNRM 191
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 245 SNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
+ FVGT Y+SPE + + D W+LG L YE+ PF ++KE
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 24 KILGKGAMGTVFLVHDRAADPTAR-CPFALKVVDKSTLHAKHEAERRARW--EIRVLSRL 80
KI+G G G V + R P R P A+K L A + +R + E ++ +
Sbjct: 55 KIIGSGDSGEV--CYGRLRVPGQRDVPVAIK-----ALKAGYTERQRRDFLSEASIMGQF 107
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + +L G + Y G L+ + +D F+ + L + + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF-LRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L ++G +RDL N+L+ + ++DF LSR L
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRGKNRKETFRNVL--MKTPEFVGQ 310
+ +PE + A D W+ G++ +E+L YG P+ ++ +V + P +G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC 279
Query: 311 RTALTDLIQRLLEKDPVKR 329
AL L+ KD +R
Sbjct: 280 PHALHQLMLDCWHKDRAQR 298
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHE----AERRARWEIRVLSRLS 81
+G GA GTV+ +A DP + ALK V + R +R L
Sbjct: 17 IGVGAYGTVY----KARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 82 HPFLPKLLGSLETD----EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
HP + +L+ T E V DL K I+ + + +
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
++ LH I +RDLKPENIL+ G V L DF L+R
Sbjct: 133 LDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR 168
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTL--HAKHEAERRARWEIRVLSRL 80
L +G+G G VF R KV K L + K A EI++L L
Sbjct: 23 LAKIGQGTFGEVFKARHRKT--------GQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 81 SHPFLPKLLGSLETDEFLAWAVPY--CPGGDLNVLRYKQNDR--VFSPSVIRFYLSEI-- 134
H + L+ T A PY C V + ++D + S +++F LSEI
Sbjct: 75 KHENVVNLIEICRTK-----ASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 135 -----ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ + ++H I +RD+K N+LI + G + L DF L+R
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 24 KILGKGAMGTVFLVHDRAADPTAR-CPFALKVVDKSTLHAKHEAERRARW--EIRVLSRL 80
KI+G G G V + R P R P A+K L A + +R + E ++ +
Sbjct: 55 KIIGSGDSGEV--CYGRLRVPGQRDVPVAIK-----ALKAGYTERQRRDFLSEASIMGQF 107
Query: 81 SHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + +L G + Y G L+ + +D F+ + L + + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF-LRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L ++G +RDL N+L+ + ++DF LSR L
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEML-YGTTPFRGKNRKETFRNVL--MKTPEFVGQ 310
+ +PE + A D W+ G++ +E+L YG P+ ++ +V + P +G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC 279
Query: 311 RTALTDLIQRLLEKDPVKR 329
AL L+ KD +R
Sbjct: 280 PHALHQLMLDCWHKDRAQR 298
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 98
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 99 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 153
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 154 LVKVADFGLSRLMTGDTX---TAHAGAKFPI 181
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 240
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 241 -GCPEKVYELMRACWQWNPSDR 261
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-- 72
+D+ +K +++G G G V H + P R F V TL + + ++R +
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKL--PGKREIF----VAIKTLKSGYTEKQRRDFLS 57
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E ++ + HP + L G + + + G L+ +QND F+ + L
Sbjct: 58 EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF-LRQNDGQFTVIQLVGMLR 116
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I +++L +M +R L NIL+ + ++DF LSR L T+
Sbjct: 117 GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
+ VGT +++PEV+ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS 256
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + L D ++R+L +DP +R A E+ +H F
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL 298
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK++ +AR E+
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKMLQDCP---------KARREVE 62
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L + GG+L + D+ F+
Sbjct: 63 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 122
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
+ I AI++LH++ IA+RD+KPEN+L R + + LTDF ++
Sbjct: 123 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 241 NGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GK 291
+R N+ + ++ + G+ ++ + D W+LG++ Y +L G PF G
Sbjct: 151 TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210
Query: 292 NRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
+ PE+ + LI+ LL+ +P +R+
Sbjct: 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 249
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 41 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 97
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 98 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 153 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 180
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 239
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 240 -GCPEKVYELMRACWQWNPSDR 260
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 95
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 96 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 150
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 151 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 178
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 237
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 238 -GCPEKVYELMRACWQWNPSDR 258
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 93
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 94 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 148
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 149 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 235
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 -GCPEKVYELMRACWQWNPSDR 256
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 63/156 (40%), Gaps = 1/156 (0%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG GA G V+ D+ + F K + + EI +LSR+ H +
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
K+L E F + G L++ + + + +++ A+ +L
Sbjct: 92 IKVLDIFENQGFFQLVMEK-HGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAF 181
I +RD+K ENI+I + + L DF + L + F
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF 186
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 239 FDNGERSNSFVGTEEYVSPEVVRGDGHEF-AVDWWALGILTYEMLYGTTPFRGKNRKETF 297
+ G+ +F GT EY +PEV+ G+ + ++ W+LG+ Y +++ PF E
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF---CELEET 236
Query: 298 RNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
+ P V + L L+ LL+ P +R
Sbjct: 237 VEAAIHPPYLVSKE--LMSLVSGLLQPVPERR 266
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 98
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 99 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 153
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 154 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 181
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 240
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 241 -GCPEKVYELMRACWQWNPSDR 261
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 50 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 106
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 107 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 161
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 162 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 189
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEFV 308
+ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE-- 248
Query: 309 GQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 249 GCPEKVYELMRACWQWNPSDR 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 38 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 94
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 95 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 149
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 150 LVKVADFGLSRLMTGDTY---TAPAGAKFPI 177
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 236
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 237 -GCPEKVYELMRACWQWNPSDR 257
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 93
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 94 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 148
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 149 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 176
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 235
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 236 -GCPEKVYELMRACWQWNPSDR 256
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 98
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 99 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 153
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 154 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 181
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 240
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 241 -GCPEKVYELMRACWQWNPSDR 261
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 95
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 96 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 150
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 151 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 178
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 237
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 238 -GCPEKVYELMRACWQWNPSDR 258
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 95
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +RDL N L+ ++
Sbjct: 96 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 150
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 151 LVKVADFGLSRLMTGDTY---TAPAGAKFPI 178
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 237
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 238 -GCPEKVYELMRACWQWNPSDR 258
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-----LTDFDLSR 173
DR FS + ++I +E++H+ + YRD+KPEN LI + G+ T + DF L++
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
Query: 174 NLV 176
+
Sbjct: 159 EYI 161
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQ 184
YL + + A+ HLH+ G+ + D+KP NI + G L DF L L A E Q
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 121/333 (36%), Gaps = 87/333 (26%)
Query: 17 LDNLKALKI--LGKGAMGTVFLV---HDRAADPTARCPFALKVVDKSTLHAKHEAERRAR 71
+DN L I LG+G V LV HD +ALK + + EA+R A
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHF-------YALKRILCHEQQDREEAQREAD 78
Query: 72 WEIRVLSRL-SHPFLPKLLGSLETD---EFLAWAV-PYCPGGDL--NVLRYKQNDRVFSP 124
+ RL +HP + +L+ + + AW + P+ G L + R K +
Sbjct: 79 -----MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 125 SVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQ 184
I + L I +E +H G A+RDLKP NIL+ G L D +Q
Sbjct: 134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193
Query: 185 SLNNNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGER 244
+L L W +A+ +S
Sbjct: 194 ALT-------------------LQDW---------------AAQRCTIS----------- 208
Query: 245 SNSFVGTEEYVSPEVVRGDGH---EFAVDWWALGILTYEMLYGTTPF-----RGKNRKET 296
Y +PE+ H + D W+LG + Y M++G P+ +G +
Sbjct: 209 ---------YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
Query: 297 FRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
+N L P+ +AL L+ ++ DP +R
Sbjct: 260 VQNQL-SIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 15/177 (8%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
+++K +K LG G G V++ + + A +K + T+ + E E ++
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVA-----VKTLKPGTMSVQAFLE-----EANLM 61
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIIC 136
L H L +L + +E + + G L + L+ + +V P +I F ++I
Sbjct: 62 KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAE 120
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ +RDL+ N+L+ +S + DF L+R + E + KFP+
Sbjct: 121 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN---EYTAREGAKFPI 174
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-- 72
+D+ +K +++G G G V +A C V TL + +R +
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC------VAIKTLKGGYTERQRREFLS 66
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E ++ + HP + +L G + + + G L+ + ND F+ + L
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLVGMLR 125
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA--FEKQSLNNNK 190
I + +L M +RDL NIL+ + ++DF LSR L + ++ E SL K
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSL-GGK 184
Query: 191 FPV 193
P+
Sbjct: 185 IPI 187
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG+GA G V + PT + + K K R EI++L H
Sbjct: 18 LLGEGAYGVVCSATHK---PTGE----IVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ + D F + Y + L + ++ S I++++ + + A++ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ +RDLKP N+LI + + + DF L+R ++ + +N++ P +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLAR------IIDESAADNSE----PTGQQSGMT 180
Query: 204 RRILTRWLHALPENKTGLKKTKSARV 229
+ TRW A T K +++ V
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-----LTDFDLSR 173
DR FS + ++I +E++H+ + YRD+KPEN LI + G+ T + DF L++
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
Query: 174 NLV 176
+
Sbjct: 159 EYI 161
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-----LTDFDLSR 173
DR FS + ++I +E++H+ + YRD+KPEN LI + G+ T + DF L++
Sbjct: 120 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
Query: 174 NLV 176
+
Sbjct: 180 EYI 182
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 46 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQN---DRVFSPS------ 125
+S L H + LLG+ + YC GDL N LR K+ + ++PS
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 126 ----VIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSRNLVKKTA 180
+ + S++ + L + +RD+ N+L+ +GHV + DF L+R+++ +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSN 221
Query: 181 FEKQSLNNNKFPV 193
+ + N + PV
Sbjct: 222 YIVKG--NARLPV 232
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 113
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN K+ + P + Y ++ A+
Sbjct: 114 HSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VG Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
++ ++ P+ L D+++ L++DP +R+
Sbjct: 274 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRI 313
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 113
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN K+ + P + Y ++ A+
Sbjct: 114 HSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRL 330
++ ++ P+ L D+++ L++DP +R+
Sbjct: 274 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRI 313
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 16 DLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
++D + ++ G+G GTV L +++ + V K + R + ++
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKST--------GMSVAIKKVIQDPRFRNRELQI-MQ 71
Query: 76 VLSRLSHPFLPKLLGSLET-------DEFLAWAVPYCPGGDLNVLR-YKQNDRVFSPSVI 127
L+ L HP + +L T D +L + Y P R Y + P +I
Sbjct: 72 DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILI 131
Query: 128 RFYLSEIICAIEHLH--NMGIAYRDLKPENILIRQS-GHVTLTDFDLSRNL 175
+ +L ++I +I LH ++ + +RD+KP N+L+ ++ G + L DF ++ L
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKN 292
E + +++ + Y +PE++ G+ H AVD W++G + EM+ G FRG N
Sbjct: 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 124
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 183
Query: 193 V 193
V
Sbjct: 184 V 184
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG+GA G V + PT + + K K R EI++L H
Sbjct: 18 LLGEGAYGVVCSATHK---PTGE----IVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ + D F + Y + L + ++ S I++++ + + A++ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ +RDLKP N+LI + + + DF L+R ++ + +N++ P +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLAR------IIDESAADNSE----PTGQQSGMT 180
Query: 204 RRILTRWLHALPENKTGLKKTKSARV 229
+ TRW A T K +++ V
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 362
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 363 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 404
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 153 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 201
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 256
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+ K
Sbjct: 257 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-- 72
+D+ +K +++G G G V +A C V TL + +R +
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESC------VAIKTLKGGYTERQRREFLS 64
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E ++ + HP + +L G + + + G L+ + ND F+ + L
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLVGMLR 123
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
I + +L M +RDL NIL+ + ++DF LSR L + ++
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 66
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN + + + P + Y ++ A+
Sbjct: 67 HSDKIIRLYDYEITDQYI-YMVMECGNIDLN--SWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 124 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 227 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 267
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 112
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 171
Query: 193 V 193
V
Sbjct: 172 V 172
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 114
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + K+P
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ-THGKWP 173
Query: 193 V 193
V
Sbjct: 174 V 174
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 122 FSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
FS I++ + +++ ++++H+ G+ +RDLKP N+ + + + + DF L+R+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 37/159 (23%)
Query: 246 NSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKT 304
+V T Y +PEV+ H VD W++G + EML G T F+GK+ + +L T
Sbjct: 199 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 258
Query: 305 ----PEFVGQ-----------------RTALT-----------DLIQRLLEKDPVKRLGY 332
EFV + R T DL++++LE D KRL
Sbjct: 259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL-- 316
Query: 333 LRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDLT 371
A + H FF+ R + PF S E LT
Sbjct: 317 --TAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLT 353
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 177
Query: 193 V 193
V
Sbjct: 178 V 178
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR-VLSRLSHPF 84
+ G +G ++L DR + VV K +H+ + R L+ + HP
Sbjct: 88 IAHGGLGWIYLALDRNVN-------GRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 85 LPKLLGSLE-TD---EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ ++ +E TD + + + V GG L+ + ++ I YL EI+ A+ +
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGG--QSLKRSKGQKLPVAEAIA-YLLEILPALSY 197
Query: 141 LHNMGIAYRDLKPENILIRQ 160
LH++G+ Y DLKPENI++ +
Sbjct: 198 LHSIGLVYNDLKPENIMLTE 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 113
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN K+ + P + Y ++ A+
Sbjct: 114 HSDKIIRLYDYEITDQYI-YMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHT 170
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 171 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 274 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 314
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 35/53 (66%)
Query: 122 FSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
FS I++ + +++ ++++H+ G+ +RDLKP N+ + + + + DF L+R+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 63/159 (39%), Gaps = 37/159 (23%)
Query: 246 NSFVGTEEYVSPEVVRGDGH-EFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKT 304
+V T Y +PEV+ H VD W++G + EML G T F+GK+ + +L T
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 240
Query: 305 ----PEFVGQ-----------------RTALT-----------DLIQRLLEKDPVKRLGY 332
EFV + R T DL++++LE D KRL
Sbjct: 241 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL-- 298
Query: 333 LRGACEIKEHVFFKGVRWDLLTDVLRPPFIPSREENDLT 371
A + H FF+ R + PF S E LT
Sbjct: 299 --TAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLT 335
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 85
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN + + + P + Y ++ A+
Sbjct: 86 HSDKIIRLYDYEITDQYI-YMVMECGNIDLN--SWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 143 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 181
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 246 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 286
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 193
Query: 193 V 193
V
Sbjct: 194 V 194
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 134
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 193
Query: 193 V 193
V
Sbjct: 194 V 194
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 476
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 535
Query: 193 V 193
V
Sbjct: 536 V 536
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 23 LKILGKGAMGTVFLVHD-RAADPTARCPFALKVVDKSTLHAKHEAERRARW-----EIRV 76
L+ +G G+ G V+ D R ++ A + K + K E+ W E+R
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVA--------IKKMSYSGKQSNEK---WQDIIKEVRF 107
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L +L HP + G E AW V YC G ++L + + I +
Sbjct: 108 LQKLRHPNTIQYRGCY-LREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 164
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAF 181
+ +LH+ + +RD+K NIL+ + G V L DF + + F
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 210
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 245 SNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
+N FVGT +++PEV+ ++ VD W+LGI E+ P N ++
Sbjct: 207 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 265
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 244 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 300
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + S V+ + ++I A+E+L +R+L N L+ ++
Sbjct: 301 ----GNLLDYLR-ECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH 355
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 356 LVKVADFGLSRLMTGDT---YTAHAGAKFPI 383
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 442
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 443 -GCPEKVYELMRACWQWNPSDR 463
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 477
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 478 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 536
Query: 193 V 193
V
Sbjct: 537 V 537
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 132
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
++ +++L +RDL N+L+ + ++DF LS+ L + K + + K+P
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK-AQTHGKWP 191
Query: 193 V 193
V
Sbjct: 192 V 192
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 95 DEFLAWAVPYCPGGDLNVLR-YKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKP 153
+++L + Y P VL+ + ++ R ++I Y+ ++ A+ +H++GI +RD+KP
Sbjct: 110 NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 154 ENILIRQSGH-VTLTDFDLSRNLV 176
+N+L+ + + L DF ++ L+
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKLI 193
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 85
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN + + + P + Y ++ A+
Sbjct: 86 HSDKIIRLYDYEITDQYI-YMVMECGNIDLN--SWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+H GI + DLKP N LI G + L DF ++ +
Sbjct: 143 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 176
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 246 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 285
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 286 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRA----TAAELLKHPFL 327
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 76 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 124
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 179
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+ K
Sbjct: 180 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 127/374 (33%), Gaps = 117/374 (31%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+GA G V D A +K VD+ AR EI+VL L+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--------EAARSEIQVLEHLNTTDP 73
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLR----YKQNDRV-FSPSVIRFYLSEIICAIEH 140
++ E+ C +L L K+N + F IR +I ++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH+ + + DLKPENIL QS + NP
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTE-------------------------------AYNP 162
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSP----VSRRQQSFDNGERSNSFVGTEEYVS 256
K +K+ + ++P V ++D+ E ++ V T Y +
Sbjct: 163 K-------------------IKRDERTLINPDIKVVDFGSATYDD-EHHSTLVSTRHYRA 202
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE---TFRNVLMKTPEFVGQRT- 312
PEV+ G D W++G + E G T F + KE +L P+ + Q+T
Sbjct: 203 PEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
Query: 313 -----------------------------------------ALTDLIQRLLEKDPVKRLG 331
L DLIQ++LE DP KR+
Sbjct: 263 KRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322
Query: 332 YLRGACEIKEHVFF 345
LR A +H FF
Sbjct: 323 -LREAL---KHPFF 332
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 240
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 241 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 31 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 79
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 134
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+ K
Sbjct: 135 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLS 132
E V+ +L +P++ +++G E + ++ + G LN +Y Q +R I +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWML-VMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 133 EIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL-VKKTAFEKQSLNNNKF 191
++ +++L +RDL N+L+ + ++DF LS+ L + ++ Q+ + K+
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT--HGKW 176
Query: 192 PV 193
PV
Sbjct: 177 PV 178
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 23 LKILGKGAMGTVFLVHD-RAADPTARCPFALKVVDKSTLHAKHEAERRARW-----EIRV 76
L+ +G G+ G V+ D R ++ A + K + K E+ W E+R
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVA--------IKKMSYSGKQSNEK---WQDIIKEVRF 68
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEII 135
L +L HP + G E AW V YC G ++L + + I +
Sbjct: 69 LQKLRHPNTIQYRGCY-LREHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGAL 125
Query: 136 CAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAF 181
+ +LH+ + +RD+K NIL+ + G V L DF + + F
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 44/132 (33%)
Query: 245 SNSFVGTEEYVSPEVVRG---DGHEFAVDWWALGILTYEMLYGTTPFRGKNR-------- 293
+N FVGT +++PEV+ ++ VD W+LGI E+ P N
Sbjct: 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA 227
Query: 294 ------------KETFRN----VLMKTPE------------FVGQR---TALTDLIQRLL 322
E FRN L K P+ FV + T + DLIQR
Sbjct: 228 QNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQR-- 285
Query: 323 EKDPVKRLGYLR 334
KD V+ L L+
Sbjct: 286 TKDAVRELDNLQ 297
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 20/182 (10%)
Query: 24 KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRAR---WEIRVLSRL 80
KILG+G G+V + + D T+ LKV K T+ + ++R E +
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTS-----LKVAVK-TMKLDNSSQREIEEFLSEAACMKDF 93
Query: 81 SHPFLPKLLG-----SLETDEFLAWAVPYCPGGDLNVL----RYKQNDRVFSPSVIRFYL 131
SHP + +LLG S + +P+ GDL+ R + + + ++
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKF 191
+I +E+L N +RDL N ++R V + DF LS+ + + + + K
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRI--AKM 211
Query: 192 PV 193
PV
Sbjct: 212 PV 213
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 117 QNDRVFSP-SVIRFYLSEIICAIEHLHN-MGIAYRDLKPENILIRQSGHVTLTDFDLSRN 174
+N F P VI+ + ++ + ++HN I +RD+KP NIL+ ++G V L+DF S
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 175 LVKK 178
+V K
Sbjct: 202 MVDK 205
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 250 GTEEYVSPEVVRGDG--HEFAVDWWALGILTYEMLYGTTPFRGK-NRKETFRNVLMKTPE 306
GT E++ PE + + VD W+LGI Y M Y PF K + E F N+ K E
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 307 F 307
+
Sbjct: 272 Y 272
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 242
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 243 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 18/169 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 33 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 81
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 136
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEK 183
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+ K
Sbjct: 137 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 13 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 65
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN + + + P + Y ++ A+
Sbjct: 66 HSDKIIRLYDYEITDQYI-YMVMECGNIDLN--SWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 123 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 161
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 225
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 226 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 266
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 24 KILGKGAMGTVF--LVHDRAADPTARCPFALKVVDK-STLHAKHEAERRARWEIRVLSRL 80
+ILG+G G V+ + + + + A+K K TL K + A ++ L
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGE---KINVAVKTCKKDCTLDNKEKFMSEAV----IMKNL 70
Query: 81 SHPFLPKLLGSLETDEFLAWAV-PYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEIICA 137
HP + KL+G +E + W + P G+L + R K + +V + + Y +I A
Sbjct: 71 DHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 125
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ +L ++ +RD+ NIL+ V L DF LSR ++ + K S+ + P+ ++
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASV--TRLPIKWMS 182
Query: 198 ENPKRHRRILTR---WLHAL 214
RR T W+ A+
Sbjct: 183 PESINFRRFTTASDVWMFAV 202
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 231
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 22 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 70
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 125
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+
Sbjct: 126 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 63/213 (29%)
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
++ A+ +LHN G+ +RD+K ++IL+ G + L+DF + K
Sbjct: 150 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK---------------- 193
Query: 194 LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEE 253
E PKR + T + A PE + L GTE
Sbjct: 194 ----EVPKRKXLVGTPYWMA-PEVISRLP--------------------------YGTE- 221
Query: 254 YVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEFVGQRTA 313
VD W+LGI+ EM+ G P+ + + R + P V
Sbjct: 222 ---------------VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHK 266
Query: 314 LTDLIQRLLEKDPVKRLGYLRGACEIKEHVFFK 346
++ +++ L+ V+ A E+ H F K
Sbjct: 267 VSSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 24/203 (11%)
Query: 17 LDNLKAL-KILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIR 75
+D+ K ++LG G G V + ++ FALK + +AR E+
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEK----FALKXLQDCP---------KARREVE 106
Query: 76 VLSRLSH-PFLPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFY 130
+ R S P + +++ E + L GG+L + D+ F+
Sbjct: 107 LHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEI 166
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
I AI++LH++ IA+RD+KPEN+L R + + LTDF ++ +
Sbjct: 167 XKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY- 225
Query: 188 NNKFPVLPVTENPKRHRRILTRW 210
+ V P P+++ + W
Sbjct: 226 -TPYYVAPEVLGPEKYDKSCDXW 247
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 251 TEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFR---------GKNRKETFRNVL 301
T YV+PEV+ + ++ + D W+LG++ Y +L G PF G +
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYE 285
Query: 302 MKTPEFVGQRTALTDLIQRLLEKDPVKR 329
PE+ + LI+ LL+ +P +R
Sbjct: 286 FPNPEWSEVSEEVKXLIRNLLKTEPTQR 313
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 8/159 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L+ ++L + +G+G G VF RA D T + + L AK E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRA-DNTLVAVKSCRETLPPDLKAKFLQE------A 163
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
R+L + SHP + +L+G + + + GGD + R+ ++++ + +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM-VGDA 222
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+E+L + +RDL N L+ + + ++DF +SR
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 24 KILGKGAMGTVF--LVHDRAADPTARCPFALKVVDK-STLHAKHEAERRARWEIRVLSRL 80
+ILG+G G V+ + + + + A+K K TL K + A ++ L
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGE---KINVAVKTCKKDCTLDNKEKFMSEAV----IMKNL 82
Query: 81 SHPFLPKLLGSLETDEFLAWAV-PYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEIICA 137
HP + KL+G +E + W + P G+L + R K + +V + + Y +I A
Sbjct: 83 DHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 137
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ +L ++ +RD+ NIL+ V L DF LSR ++ + K S+ + P+ ++
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASV--TRLPIKWMS 194
Query: 198 ENPKRHRRILTR---WLHAL 214
RR T W+ A+
Sbjct: 195 PESINFRRFTTASDVWMFAV 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 244 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK 303
R VGT +++PE++ + VD W+LGI+ EM+ G P+ + + + +
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN 235
Query: 304 TPEFVGQ----RTALTDLIQRLLEKDPVKRLGYLRGACEIKEHVFF 345
P + +L + RLL +DP +R A E+ +H F
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
LDN +KI G+G+ G V + T R L V K L + E E+ +
Sbjct: 26 LDNF--IKI-GEGSTGIVCIA-------TVRSSGKLVAVKKMDLRKQQRRELLFN-EVVI 74
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEI 134
+ H + ++ S + L + + GG L V + N+ + + +
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCL-----AV 129
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
+ A+ LH G+ +RD+K ++IL+ G V L+DF + K+
Sbjct: 130 LQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 174
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L+ ++L + +G+G G VF RA + L V + + + E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADN-------TLVAVKSCRETLPPDLKAKFLQEA 163
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
R+L + SHP + +L+G + + + GGD + R+ ++++ + +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM-VGDA 222
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+E+L + +RDL N L+ + + ++DF +SR
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK +G G VF V + A L+ D TL + R EI L++L
Sbjct: 17 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-------YRNEIAYLNKLQQ 69
Query: 83 PF--LPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ +L TD+++ + V C DLN + + + P + Y ++ A+
Sbjct: 70 HSDKIIRLYDYEITDQYI-YMVMECGNIDLN--SWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
+H GI + DLKP N LI G + L DF ++ + T
Sbjct: 127 IHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 165
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 19/103 (18%)
Query: 246 NSFVGTEEYVSPEVV------RGDGHEFAV-----DWWALGILTYEMLYGTTPFRG-KNR 293
+S VGT Y+ PE + R +G + D W+LG + Y M YG TPF+ N+
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 229
Query: 294 KETFRNVL-----MKTPEFVGQRTALTDLIQRLLEKDPVKRLG 331
++ ++ P+ L D+++ L++DP +R+
Sbjct: 230 ISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRIS 270
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 24 KILGKGAMGTVF--LVHDRAADPTARCPFALKVVDK-STLHAKHEAERRARWEIRVLSRL 80
+ILG+G G V+ + + + + A+K K TL K + A ++ L
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGE---KINVAVKTCKKDCTLDNKEKFMSEAV----IMKNL 66
Query: 81 SHPFLPKLLGSLETDEFLAWAV-PYCPGGDLN--VLRYKQNDRVFSPSVIRFYLSEIICA 137
HP + KL+G +E + W + P G+L + R K + +V + + Y +I A
Sbjct: 67 DHPHIVKLIGIIEEEP--TWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKA 121
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ +L ++ +RD+ NIL+ V L DF LSR ++ + K S+ + P+ ++
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASV--TRLPIKWMS 178
Query: 198 ENPKRHRRILTR---WLHAL 214
RR T W+ A+
Sbjct: 179 PESINFRRFTTASDVWMFAV 198
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 16/166 (9%)
Query: 15 LDLDNLKALKI-LGKGAMGTV----FLVHDRAADPTARCPFALKVVDKSTLHAKHEAERR 69
L DNL I LG G G+V + + + D A+KV+ + T A E R
Sbjct: 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQID------VAIKVLKQGTEKADTEEMMR 385
Query: 70 ARWEIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF 129
E +++ +L +P++ +L+G + E L + GG L+ + + + +V
Sbjct: 386 ---EAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 441
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
L ++ +++L +R+L N+L+ + ++DF LS+ L
Sbjct: 442 -LHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 26 LGKGAMGTVFLVHDRAADPTA-RCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
LG+GA G VFL P + A+K + +++ A+ + +R A +L+ L H
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE----LLTMLQHQH 104
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVF-------SPSVIRF-----YL 131
+ + G L Y GDLN LR D +P +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
S++ + +L + +RDL N L+ Q V + DF +SR++
Sbjct: 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 18/206 (8%)
Query: 25 ILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+LG+GA G V + PT + + K K R EI++L H
Sbjct: 18 LLGEGAYGVVCSATHK---PTGE----IVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLNV-LRYKQNDRVFSPSVIRFYLSEIICAIEHLHN 143
+ + D F + Y + L + ++ S I++++ + + A++ LH
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 144 MGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPKRH 203
+ +RDLKP N+LI + + + DF L+R ++ + +N++ P +
Sbjct: 131 SNVIHRDLKPSNLLINSNCDLKVCDFGLAR------IIDESAADNSE----PTGQQSGMV 180
Query: 204 RRILTRWLHALPENKTGLKKTKSARV 229
+ TRW A T K +++ V
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDV 206
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 116/323 (35%), Gaps = 70/323 (21%)
Query: 20 LKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
L+ ++L +G V+ A D + +ALK + L + E R E+ + +
Sbjct: 30 LRVRRVLAEGGFAFVY----EAQDVGSGREYALKRL----LSNEEEKNRAIIQEVCFMKK 81
Query: 80 LS-HPFLPKL-----LGSLETD----EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF 129
LS HP + + +G E+D EFL C G + L+ ++ S +
Sbjct: 82 LSGHPNIVQFCSAASIGKEESDTGQAEFLLL-TELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 130 YLSEIICAIEHLHNMG--IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLN 187
+ A++H+H I +RDLK EN+L+ G + L DF + + + +
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA-- 198
Query: 188 NNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNS 247
RR AL E + T R + +F GE+
Sbjct: 199 ---------------QRR-------ALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ-- 234
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTPEF 307
D WALG + Y + + PF K N P
Sbjct: 235 ----------------------DIWALGCILYLLCFRQHPFE-DGAKLRIVNGKYSIPPH 271
Query: 308 VGQRTALTDLIQRLLEKDPVKRL 330
Q T LI+ +L+ +P +RL
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERL 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 32/201 (15%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW-EIRV 76
+NL+ K LG GA G V + A + LKV K H E+ A E+++
Sbjct: 31 NNLQFGKTLGAGAFGKVV---EATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 77 LSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSV-------- 126
+S L H + LLG+ + YC GDL N LR K + + PS+
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA-EAMLGPSLAPGQDPEG 146
Query: 127 -------------IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLS 172
+ + S++ + L + +RD+ N+L+ +GHV + DF L+
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT-NGHVAKIGDFGLA 205
Query: 173 RNLVKKTAFEKQSLNNNKFPV 193
R+++ + + + N + PV
Sbjct: 206 RDIMNDSNYIVKG--NARLPV 224
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 36 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 88
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 148
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 180
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 28 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 28 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 30 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 82
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 142
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G+R + + Y SPEV+ G ++ A+D W+LG + EM G F G N + ++
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G+R + + Y SPEV+ G ++ A+D W+LG + EM G F G N + ++
Sbjct: 193 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 242 GERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
G+R + + Y SPEV+ G ++ A+D W+LG + EM G F G N + ++
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 28 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 26 LGKGAMGTVFLVHDRAADPTA-RCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
LG+GA G VFL P + A+K + +++ A+ + +R A +L+ L H
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE----LLTMLQHQH 81
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVF-------SPSVIRF-----YL 131
+ + G L Y GDLN LR D +P +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
S++ + +L + +RDL N L+ Q V + DF +SR++
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 28 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR 172
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 28/173 (16%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
+ K ++++G G G VF R T V K + +AER E++ L+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKT--------YVIKRVKYNNEKAER----EVKALA 59
Query: 79 RLSHPFLPKLLGSLETDEF----------------LAWAVPYCPGGDLNVLRYKQNDRVF 122
+L H + G + ++ L + +C G L K+
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 123 SPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+ +I ++++H+ + RDLKP NI + + V + DF L +L
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 6/107 (5%)
Query: 224 TKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLY 283
TK ++ ++G+R S GT Y+SPE + + VD +ALG++ E+L+
Sbjct: 158 TKQVKIGDFGLVTSLKNDGKRXRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
Query: 284 -GTTPFRGKNRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
T F R+ ++ ++T L+Q+LL K P R
Sbjct: 217 VCDTAFETSKFFTDLRDGIISDIFDKKEKT----LLQKLLSKKPEDR 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 26 LGKGAMGTVFLVHDRAADPTA-RCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
LG+GA G VFL P + A+K + +++ A+ + +R E +L+ L H
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR----EAELLTMLQHQH 75
Query: 85 LPKLLGSLETDEFLAWAVPYCPGGDLN-VLRYKQNDRVF-------SPSVIRF-----YL 131
+ + G L Y GDLN LR D +P +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 132 SEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
S++ + +L + +RDL N L+ Q V + DF +SR++
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 48 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 100
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 161 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 192
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 28 LSYIGEGAYGMVC----SAYDNVNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 80
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 140
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH-----VTLTDFDLSR 173
DR F+ + +++ +E++H+ + YRD+KPEN LI + G+ + + DF L++
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 174 NLV 176
+
Sbjct: 151 EYI 153
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 33 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 85
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 34 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 86
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 146
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 147 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 178
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 25 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 77
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 137
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 138 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 169
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 32 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 84
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 32 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 84
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 32 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 84
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 144
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 249 VGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 137 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 33 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 85
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 145
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 249 VGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 128 RFYLSEIICAIEHLHNMGIAYRDLKPENILIR-QSGHVTLTDFDLSRNLVKKTAF 181
R + +++ A+ H HN G+ +RD+K ENILI G + L DF S L+K T +
Sbjct: 160 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVY 213
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 246 NSFVGTEEYVSPEVVRGD---GHEFAVDWWALGILTYEMLYGTTPF 288
F GT Y PE +R G AV W+LGIL Y+M+ G PF
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAV--WSLGILLYDMVCGDIPF 257
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 117 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 69/298 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V D A + ALK++ + AR EI VL ++
Sbjct: 36 LGEGTFGKVVECLDHA---RGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDK 87
Query: 86 P-KLLGSLETDEFLAWAVPYCPGGDL---NVLRY-KQNDRVFSP---SVIRFYLSEIICA 137
K L L +D F + C +L N + K+N+ F P +R ++ A
Sbjct: 88 ENKFLCVLMSDWF-NFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHA 144
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ LH + + DLKPENIL S TL + + + E++S+ N
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYN--------EHKSCEEKSVKNT-------- 188
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
S RV+ +FD+ E + V T Y P
Sbjct: 189 ----------------------------SIRVADFG--SATFDH-EHHTTIVATRHYRPP 217
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE---TFRNVLMKTPEFVGQRT 312
EV+ G D W++G + +E G T F+ +E +L P + RT
Sbjct: 218 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT 275
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 241 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 297
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +R+L N L+ ++
Sbjct: 298 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH 352
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 353 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 380
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 439
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 440 -GCPEKVYELMRACWQWNPSDR 460
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 117 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 26 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 78
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL--MKT 304
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L + +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 305 PE 306
PE
Sbjct: 245 PE 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 118 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 26 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 78
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYI 138
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 139 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 50 FALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFLPKLLGSLETD-------EFLAWAV 102
++L V K+ E E + E V+ + HP L +LLG + EF+ +
Sbjct: 283 YSLTVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY-- 339
Query: 103 PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG 162
G L+ LR + N + + V+ + ++I A+E+L +R+L N L+ ++
Sbjct: 340 ----GNLLDYLR-ECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH 394
Query: 163 HVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
V + DF LSR + T + KFP+
Sbjct: 395 LVKVADFGLSRLMTGDTY---TAHAGAKFPI 422
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 253 EYVSPEVVRGDGHEFAVDWWALGILTYEM-LYGTTPFRGKNRKETF----RNVLMKTPEF 307
++ +PE + + D WA G+L +E+ YG +P+ G + + + ++ M+ PE
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE- 481
Query: 308 VGQRTALTDLIQRLLEKDPVKR 329
G + +L++ + +P R
Sbjct: 482 -GCPEKVYELMRACWQWNPSDR 502
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 31/43 (72%), Gaps = 4/43 (9%)
Query: 120 RVFSPSV----IRFYLSEIICAIEHLHNMGIAYRDLKPENILI 158
+V P++ IR+Y+ E++ A+++ H+ GI +RD+KP N++I
Sbjct: 116 KVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
L + + LK LG G G V + + A+K++ + ++ +E E
Sbjct: 5 LKREEITLLKELGSGQFGVV-----KLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEA 54
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
+ + +LSHP L K G + + Y G L N LR + + PS + +
Sbjct: 55 QTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR--SHGKGLEPSQLLEMCYD 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + L + +RDL N L+ + V ++DF ++R ++ + S KFPV
Sbjct: 113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD---QYVSSVGTKFPV 169
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I ++L +I+ ++++H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR 174
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 69/298 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V D A + ALK++ + AR EI VL ++
Sbjct: 27 LGEGTFGKVVECLDHA---RGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDK 78
Query: 86 P-KLLGSLETDEFLAWAVPYCPGGDL---NVLRY-KQNDRVFSP---SVIRFYLSEIICA 137
K L L +D F + C +L N + K+N+ F P +R ++ A
Sbjct: 79 ENKFLCVLMSDWF-NFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHA 135
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ LH + + DLKPENIL S TL + + + E++S+ N
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYN--------EHKSCEEKSVKNT-------- 179
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
S RV+ +FD+ E + V T Y P
Sbjct: 180 ----------------------------SIRVADFG--SATFDH-EHHTTIVATRHYRPP 208
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE---TFRNVLMKTPEFVGQRT 312
EV+ G D W++G + +E G T F+ +E +L P + RT
Sbjct: 209 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT 266
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + + + E E
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EA 54
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L + LR ++ +F+ + +
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLD 112
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 169
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 10/153 (6%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIRVLSRLS 81
L +G+GA G V +D ++V K +H+ +R EI++L R
Sbjct: 32 LSYIGEGAYGMVCSAYDNLN--------KVRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEH 140
H + + + Y + YK + S I ++L +I+ +++
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKY 143
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 109/298 (36%), Gaps = 69/298 (23%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V D A + ALK++ + AR EI VL ++
Sbjct: 59 LGEGTFGKVVECLDHA---RGKSQVALKIIRNVG-----KYREAARLEINVLKKIKEKDK 110
Query: 86 P-KLLGSLETDEFLAWAVPYCPGGDL---NVLRY-KQNDRVFSPS---VIRFYLSEIICA 137
K L L +D F + C +L N + K+N+ F P +R ++ A
Sbjct: 111 ENKFLCVLMSDWF-NFHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHA 167
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVT 197
+ LH + + DLKPENIL S TL + + + E++S+ N
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYN--------EHKSCEEKSVKNT-------- 211
Query: 198 ENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSP 257
S RV+ +FD+ E + V T Y P
Sbjct: 212 ----------------------------SIRVADFG--SATFDH-EHHTTIVATRHYRPP 240
Query: 258 EVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE---TFRNVLMKTPEFVGQRT 312
EV+ G D W++G + +E G T F+ +E +L P + RT
Sbjct: 241 EVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRT 298
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 20 LKALKILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
LK ++ LG+G G V L +D D T ++V L A + R+ W EI +
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTG------EMVAVKALKADCGPQHRSGWKQEIDI 69
Query: 77 LSRLSHPFLPKLLGSLET--DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L L H + K G E ++ L + Y P G L Y + ++ F ++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLF--AQQ 125
Query: 135 IC-AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
IC + +LH+ +R+L N+L+ V + DF L++
Sbjct: 126 ICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + + + E E
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EA 56
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L + LR ++ +F+ + +
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMCLD 114
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 115 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 171
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
L +G+GA G V A D + A+K + S + +R R EI++L R H
Sbjct: 32 LSYIGEGAYGMVC----SAYDNLNKVRVAIKKI--SPFEHQTYCQRTLR-EIKILLRFRH 84
Query: 83 PFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQ-NDRVFSPSVIRFYLSEIICAIEHL 141
+ + + Y + YK + S I ++L +I+ ++++
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYI 144
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G+ G V + D+ +C A+K V A+ E+ + L+ P +
Sbjct: 101 LGRGSFGEVHRMEDKQTG--FQC--AVKKVRLEVFRAE---------ELMACAGLTSPRI 147
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN----DRVFSPSVIRFYLSEIICAIEHL 141
L G++ ++ + GG L L +Q DR +YL + + +E+L
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL------YYLGQALEGLEYL 201
Query: 142 HNMGIAYRDLKPENILIRQSG-HVTLTDFDLSRNLVKKTAFEKQSLNNNKFP 192
H+ I + D+K +N+L+ G H L DF + L + K L + P
Sbjct: 202 HSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCL-QPDGLGKSLLTGDYIP 252
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 250 GTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTP---E 306
GTE +++PEVV G + VD W+ + ML G P+ R + + P E
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 312
Query: 307 FVGQRTALT-DLIQRLLEKDPVKRL 330
LT IQ L K+P+ R+
Sbjct: 313 IPPSCAPLTAQAIQEGLRKEPIHRV 337
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
HP + KL+G + T+ + + C G+L + + S+I Y ++ A+ +L
Sbjct: 72 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYL 129
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVTE 198
+ +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPESI 186
Query: 199 NPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + + + E E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EA 53
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR-VFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L+ Y + R +F+ + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAAETLLGMCLD 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 112 VCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 168
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
HP + KL+G + T+ + + C G+L + + S+I Y ++ A+ +L
Sbjct: 73 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYL 130
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVTE 198
+ +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPESI 187
Query: 199 NPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 233
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 24/149 (16%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G+ G V + D+ +C A+K V A+ E+ + L+ P +
Sbjct: 82 LGRGSFGEVHRMEDKQTG--FQC--AVKKVRLEVFRAE---------ELMACAGLTSPRI 128
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN----DRVFSPSVIRFYLSEIICAIEHL 141
L G++ ++ + GG L L +Q DR +YL + + +E+L
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL------YYLGQALEGLEYL 182
Query: 142 HNMGIAYRDLKPENILIRQSG-HVTLTDF 169
H+ I + D+K +N+L+ G H L DF
Sbjct: 183 HSRRILHGDVKADNVLLSSDGSHAALCDF 211
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 250 GTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMKTP---E 306
GTE +++PEVV G + VD W+ + ML G P+ R + + P E
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 307 FVGQRTALT-DLIQRLLEKDPVKRL 330
LT IQ L K+P+ R+
Sbjct: 294 IPPSCAPLTAQAIQEGLRKEPIHRV 318
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSG-----HVTLTDFDLSR 173
DR F+ + ++I +E++H + YRD+KPEN L+ + G + + DF L++
Sbjct: 94 DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 174 NLV 176
+
Sbjct: 154 EYI 156
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 98 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAY 154
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 155 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPES 211
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + ++ E E
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIKEGSMSEDDFIE-----EA 73
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR-VFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L+ Y + R +F+ + +
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAAETLLGMCLD 131
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 132 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 188
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
HP + KL+G + T+ + + C G+L + + S+I Y ++ A+ +L
Sbjct: 67 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAYL 124
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVTE 198
+ +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPESI 181
Query: 199 NPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 75 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAY 131
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPES 188
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 71/186 (38%), Gaps = 41/186 (22%)
Query: 19 NLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
+ K ++++G G G VF R T V + + +AER E++ L+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKT--------YVIRRVKYNNEKAER----EVKALA 60
Query: 79 RLSHPFLPKLLG--------------SLETDEF---------------LAWAVPYCPGGD 109
+L H + G SLE+ ++ L + +C G
Sbjct: 61 KLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGT 120
Query: 110 LNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDF 169
L K+ + +I ++++H+ + +RDLKP NI + + V + DF
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 170 DLSRNL 175
L +L
Sbjct: 181 GLVTSL 186
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 221 LKKTKSARVSPVSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYE 280
L TK ++ ++G+R+ S GT Y+SPE + + VD +ALG++ E
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 281 MLY-GTTPFRGKNRKETFRNVLMKTPEFVGQRTALTDLIQRLLEKDPVKR 329
+L+ T F R+ ++ ++T L+Q+LL K P R
Sbjct: 228 LLHVCDTAFETSKFFTDLRDGIISDIFDKKEKT----LLQKLLSKKPEDR 273
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I ++L +I+ ++++H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 127 IRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
I ++L +I+ ++++H+ + +RDLKP N+L+ + + + DF L+R
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 248 FVGTEEYVSPEVV-RGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVL 301
+V T Y +PE++ G+ ++D W++G + EML F GK+ + ++L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + + + E E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EA 53
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR-VFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L+ Y + R +F+ + +
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAAETLLGMCLD 111
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 112 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P AL V K+ + ++ R + E + +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENP------ALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 70 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAY 126
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPES 183
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 230
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 20 LKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
LK ++ LG+G G V L +D D T A+K + K H A+ + EI +L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGE-QVAVKSL-KPESGGNHIADLKK--EIEILR 66
Query: 79 RLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L H + K G D + + + P G L K +++ ++ Y +I
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICK 125
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+++L + +RDL N+L+ V + DF L++ +
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEI 74
+D L ++ +G G G V L + D A +K + + + + E E
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVA-----IKTIREGAMSEEDFIE-----EA 51
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR-VFSPSVIRFYLSE 133
V+ +LSHP L +L G + + G L+ Y + R +F+ + +
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAAETLLGMCLD 109
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ + +L + +RDL N L+ ++ + ++DF ++R ++ + S KFPV
Sbjct: 110 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD---QYTSSTGTKFPV 166
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 8/159 (5%)
Query: 20 LKALKILGKGAMGTVFLV-HDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLS 78
LK ++ LG+G G V L +D D T A+K + K H A+ + EI +L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGE-QVAVKSL-KPESGGNHIADLKK--EIEILR 78
Query: 79 RLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L H + K G D + + + P G L K +++ ++ Y +I
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICK 137
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
+++L + +RDL N+L+ V + DF L++ +
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 16/162 (9%)
Query: 20 LKALKILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
LK ++ LG+G G V L +D D T ++V L A + R+ W EI +
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTG------EMVAVKALKADAGPQHRSGWKQEIDI 86
Query: 77 LSRLSHPFLPKLLGSLETD--EFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L L H + K G E L + Y P G L Y + ++ F ++
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLF--AQQ 142
Query: 135 IC-AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNL 175
IC + +LH +RDL N+L+ V + DF L++ +
Sbjct: 143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 126/374 (33%), Gaps = 117/374 (31%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+GA G V D A +K VD+ AR EI+VL L+
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--------EAARSEIQVLEHLNTTDP 73
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLR----YKQNDRV-FSPSVIRFYLSEIICAIEH 140
++ E+ C +L L K+N + F IR +I ++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENP 200
LH+ + + DLKPENIL QS + NP
Sbjct: 134 LHSNKLTHTDLKPENILFVQSDYTE-------------------------------AYNP 162
Query: 201 KRHRRILTRWLHALPENKTGLKKTKSARVSP----VSRRQQSFDNGERSNSFVGTEEYVS 256
K +K+ + ++P V ++D+ E ++ V Y +
Sbjct: 163 K-------------------IKRDERTLINPDIKVVDFGSATYDD-EHHSTLVXXRHYRA 202
Query: 257 PEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE---TFRNVLMKTPEFVGQRT- 312
PEV+ G D W++G + E G T F + KE +L P+ + Q+T
Sbjct: 203 PEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR 262
Query: 313 -----------------------------------------ALTDLIQRLLEKDPVKRLG 331
L DLIQ++LE DP KR+
Sbjct: 263 KRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT 322
Query: 332 YLRGACEIKEHVFF 345
LR A +H FF
Sbjct: 323 -LREAL---KHPFF 332
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 27/196 (13%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ A E E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEEDLSDLVSEM 91
Query: 75 RVLSRLS-HPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQ 117
++ + H + LLG+ D L V Y G+L ++ R +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 118 NDRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 152 EQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 178 KTAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 210 IDYYKKTT--NGRLPV 223
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 16/160 (10%)
Query: 20 LKALKILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
LK ++ LG+G G V L +D D T ++V L A + R+ W EI +
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTG------EMVAVKALKADCGPQHRSGWKQEIDI 69
Query: 77 LSRLSHPFLPKLLGSLET--DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L L H + K G E ++ L + Y P G L Y + ++ F ++
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLR--DYLPRHSIGLAQLLLF--AQQ 125
Query: 135 IC-AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
IC + +LH +R+L N+L+ V + DF L++
Sbjct: 126 ICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 15 LDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRA-RWE 73
+ + L+ +++GKG G V+ H R A ++++D + +E + +A + E
Sbjct: 30 IPFEQLEIGELIGKGRFGQVY--HGRWHGEVA-----IRLID---IERDNEDQLKAFKRE 79
Query: 74 IRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSE 133
+ + H + +G+ + LA C G L + + V + R E
Sbjct: 80 VMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQE 138
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDL 171
I+ + +LH GI ++DLK +N+ +G V +TDF L
Sbjct: 139 IVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 139
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 140 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 87/266 (32%), Gaps = 73/266 (27%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN----DRVFSPSVIR 128
E+ + LS P + L G++ ++ + GG L L + DR
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL------ 169
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH-VTLTDFDLSRNLVKKTAFEKQSLN 187
+YL + + +E+LH I + D+K +N+L+ G L DF
Sbjct: 170 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG----------------- 212
Query: 188 NNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNS 247
HAL GL K S G +
Sbjct: 213 ------------------------HALCLQPDGLGK--------------SLLTG---DY 231
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP----FRGKNRKETFRNVLMK 303
GTE +++PEVV G + VD W+ + ML G P FRG +
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 291
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKR 329
IQ L K+PV R
Sbjct: 292 REIPPSCAPLTAQAIQEGLRKEPVHR 317
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P A+ V K+ + ++ R + E + +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENP------AMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 70 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKYSLDLASLI-LYAYQLSTALAY 126
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPES 183
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 141
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 87/266 (32%), Gaps = 73/266 (27%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN----DRVFSPSVIR 128
E+ + LS P + L G++ ++ + GG L L + DR
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL------ 153
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH-VTLTDFDLSRNLVKKTAFEKQSLN 187
+YL + + +E+LH I + D+K +N+L+ G L DF
Sbjct: 154 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG----------------- 196
Query: 188 NNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNS 247
HAL GL K S G +
Sbjct: 197 ------------------------HALCLQPDGLGK--------------SLLTG---DY 215
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP----FRGKNRKETFRNVLMK 303
GTE +++PEVV G + VD W+ + ML G P FRG +
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 275
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKR 329
IQ L K+PV R
Sbjct: 276 REIPPSCAPLTAQAIQEGLRKEPVHR 301
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 81 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 138
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 139 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 76 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 133
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 134 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 140
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 79 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 136
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P A+ V K+ + ++ R + E + +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENP------AMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 70 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAY 126
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 127 LESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPES 183
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 102 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 159
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 160 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 87/266 (32%), Gaps = 73/266 (27%)
Query: 73 EIRVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQN----DRVFSPSVIR 128
E+ + LS P + L G++ ++ + GG L L + DR
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRAL------ 167
Query: 129 FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH-VTLTDFDLSRNLVKKTAFEKQSLN 187
+YL + + +E+LH I + D+K +N+L+ G L DF
Sbjct: 168 YYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG----------------- 210
Query: 188 NNKFPVLPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSPVSRRQQSFDNGERSNS 247
HAL GL K S G +
Sbjct: 211 ------------------------HALCLQPDGLGK--------------SLLTG---DY 229
Query: 248 FVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTP----FRGKNRKETFRNVLMK 303
GTE +++PEVV G + VD W+ + ML G P FRG +
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 289
Query: 304 TPEFVGQRTALTDLIQRLLEKDPVKR 329
IQ L K+PV R
Sbjct: 290 REIPPSCAPLTAQAIQEGLRKEPVHR 315
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 211 DYYKKTT--NGRLPV 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 103 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 160
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 161 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 141
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K + + K PV
Sbjct: 142 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P A+ V K+ + ++ R + E + +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENP------AMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
HP + KL+G + T+ + + C G+L + + S+I Y ++ A+ +L
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYL 507
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVTE 198
+ +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 508 ESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPESI 564
Query: 199 NPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 610
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 22/229 (9%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P A+ V K+ + ++ R + E + +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENP------AMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHL 141
HP + KL+G + T+ + + C G+L + + S+I Y ++ A+ +L
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAYL 507
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVTE 198
+ +RD+ N+L+ + V L DF LSR + T ++ + K P+ P +
Sbjct: 508 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA---SKGKLPIKWMAPESI 564
Query: 199 NPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 610
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G G+ GTV+ D + LKVVD + E + R E+ VL + H +
Sbjct: 44 IGSGSFGTVY-KGKWHGDVAVKI---LKVVDPTP-----EQFQAFRNEVAVLRKTRHVNI 94
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+G + D LA +C G L + Q + +I + +++LH
Sbjct: 95 LLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-ARQTAQGMDYLHAKN 152
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLS 172
I +RD+K NI + + V + DF L+
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 250 GTEEYVSPEVVR---GDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKE 295
G+ +++PEV+R + F D ++ GI+ YE++ G P+ N ++
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 211 DYYKKTT--NGRLPV 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 17 LDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
+D + + LG+G G V+ +A D A+K + H + A E+ +
Sbjct: 33 IDRYRRITKLGEGTYGEVY----KAIDTVTNETVAIKRIRLE--HEEEGVPGTAIREVSL 86
Query: 77 LSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC 136
L L H + +L + + L Y ++ +Y + S VI+ +L ++I
Sbjct: 87 LKELQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 137 AIEHLHNMGIAYRDLKPENILIRQSGH-----VTLTDFDLSR 173
+ H+ +RDLKP+N+L+ S + + DF L+R
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H R E+++
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKI 76
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV 121
L + H + LLG+ + L V +C G+L+ LR K+N+ V
Sbjct: 77 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 124
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
Y ++ +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 251
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 211 DYYKKTT--NGRLPV 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 131 LSEIICAIEHLHNMGIAYRDLKPENILIRQ-SGH----VTLTDFDLSRNL-VKKTAFEKQ 184
L + + HLH++ I +RDLKP NILI + H ++DF L + L V + +F ++
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 185 S 185
S
Sbjct: 184 S 184
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H R E+++
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKI 78
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV 121
L + H + LLG+ + L V +C G+L+ LR K+N+ V
Sbjct: 79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 126
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
Y ++ +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 253
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 211 DYYKKTT--NGRLPV 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSH 82
LK LG G G VF D D +V K + ++ + A EI+++ RL H
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDK--------RVAIKKIVLTDPQSVKHALREIKIIRRLDH 67
Query: 83 PFLPKLL------GSLETDEFLAWAVPYCPGGDLN----VLRYKQND--RVFSPSVI--- 127
+ K+ GS TD+ + +LN V Y + D V +
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLT-------ELNSVYIVQEYMETDLANVLEQGPLLEE 120
Query: 128 --RFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVT-LTDFDLSR 173
R ++ +++ ++++H+ + +RDLKP N+ I V + DF L+R
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 242 GERSNSFVGTEEYVSPEVVRG-DGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNV 300
G S V T+ Y SP ++ + + A+D WA G + EML G T F G + E + +
Sbjct: 179 GHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
Query: 301 LMKTP 305
L P
Sbjct: 238 LESIP 242
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H R E+++
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKI 85
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV 121
L + H + LLG+ + L V +C G+L+ LR K+N+ V
Sbjct: 86 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
Y ++ +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 211 DYYKKTT--NGRLPV 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARC-PFALKVVDKSTLHAKHEAERRARWEIRV 76
D LK K LG+GA G V D TA C A+K++ + H++H R E+++
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH---RALMSELKI 83
Query: 77 LSRLSHPF-LPKLLGSL-ETDEFLAWAVPYCPGGDLNV-LRYKQNDRV 121
L + H + LLG+ + L V +C G+L+ LR K+N+ V
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQS 185
Y ++ +E L + +RDL NIL+ + V + DF L+R++ K + ++
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 258
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRL-S 81
L+ +G G G+VF + C +A+K K A E+ A E+ + L
Sbjct: 12 LEKIGSGEFGSVF----KCVKRLDGCIYAIKRSKKPL--AGSVDEQNALREVYAHAVLGQ 65
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV---FSPSVIRFYLSEIICAI 138
H + + + D+ + YC GG L +N R+ F + ++ L ++ +
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL-ADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 139 EHLHNMGIAYRDLKPENILIRQS 161
++H+M + + D+KP NI I ++
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISRT 147
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS- 81
L+ +G G G+VF R C +A+K K A E+ A E+ + L
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDG----CIYAIKRSKKPL--AGSVDEQNALREVYAHAVLGQ 69
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV---FSPSVIRFYLSEIICAI 138
H + + + D+ + YC GG L +N R+ F + ++ L ++ +
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL-ADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 139 EHLHNMGIAYRDLKPENILIRQS 161
++H+M + + D+KP NI I ++
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISRT 151
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 83 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 140
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ +++L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 141 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EXXSVHNKTGAK 197
Query: 194 LPV 196
LPV
Sbjct: 198 LPV 200
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLS- 81
L+ +G G G+VF R C +A+K K A E+ A E+ + L
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDG----CIYAIKRSKKPL--AGSVDEQNALREVYAHAVLGQ 67
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV---FSPSVIRFYLSEIICAI 138
H + + + D+ + YC GG L +N R+ F + ++ L ++ +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL-ADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 139 EHLHNMGIAYRDLKPENILIRQS 161
++H+M + + D+KP NI I ++
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRT 149
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 23 LKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRL-S 81
L+ +G G G+VF R C +A+K K A E+ A E+ + L
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDG----CIYAIKRSKKPL--AGSVDEQNALREVYAHAVLGQ 67
Query: 82 HPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRV---FSPSVIRFYLSEIICAI 138
H + + + D+ + YC GG L +N R+ F + ++ L ++ +
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSL-ADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 139 EHLHNMGIAYRDLKPENILIRQS 161
++H+M + + D+KP NI I ++
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISRT 149
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 75/176 (42%), Gaps = 14/176 (7%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVL 77
++L+ +K LG G G V++ A+K + T+ + E E +++
Sbjct: 9 ESLQLIKRLGNGQFGEVWM-----GTWNGNTKVAIKTLKPGTMSPESFLE-----EAQIM 58
Query: 78 SRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICA 137
+L H L +L + + G L+ L+ + + P+++ +++
Sbjct: 59 KKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM-AAQVAAG 117
Query: 138 IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ M +RDL+ NIL+ + DF L+R L++ E + KFP+
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR-LIEDN--EXTARQGAKFPI 170
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G G V+ + T +VD +T K + ++ EI+V+++ H L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQ----EIKVMAKCQHENL 92
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV---IRFYLSEIIC-AIEHL 141
+LLG + L Y P G L + R D +P + +R +++ I L
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSL-LDRLSCLDG--TPPLSWHMRCKIAQGAANGINFL 149
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H +RD+K NIL+ ++ ++DF L+R
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G G V+ + T +VD +T K + ++ EI+V+++ H L
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQ----EIKVMAKCQHENL 92
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV---IRFYLSEIIC-AIEHL 141
+LLG + L Y P G L + R D +P + +R +++ I L
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSL-LDRLSCLDG--TPPLSWHMRCKIAQGAANGINFL 149
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H +RD+K NIL+ ++ ++DF L+R
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+G G V + D P A+K++ K K ++ + E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 82
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 83 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 142 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 199
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 200 DYYKKTT--NGRLPV 212
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
+K + N + PV
Sbjct: 211 DXXKKTT--NGRLPV 223
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
+K + N + PV
Sbjct: 211 DXXKKTT--NGRLPV 223
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
+G+G G V+ + T +VD +T K + ++ EI+V+++ H L
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQ----EIKVMAKCQHENL 86
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSV---IRFYLSEIIC-AIEHL 141
+LLG + L Y P G L + R D +P + +R +++ I L
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSL-LDRLSCLDG--TPPLSWHMRCKIAQGAANGINFL 143
Query: 142 HNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
H +RD+K NIL+ ++ ++DF L+R
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 24 KILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAER-RARWEIRVLSRLS 81
+ +G+G G V ++ +P A+ V K+ + ++ R + E + +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENP------AMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 82 HPFLPKLLGSLETDEFLAWAV-PYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
HP + KL+G + + W + C G+L + + S+I Y ++ A+ +
Sbjct: 70 HPHIVKLIGVITENP--VWIIMELCTLGELRSFLQVRKFSLDLASLI-LYAYQLSTALAY 126
Query: 141 LHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV---LPVT 197
L + +RD+ N+L+ + V L DF LSR + T + + K P+ P +
Sbjct: 127 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKA---SKGKLPIKWMAPES 183
Query: 198 ENPKRHRRILTRWLHALPENKT---GLKKTKSARVSPVSRRQQSFDNGER 244
N +R W+ + + G+K + + + V R +NGER
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR---IENGER 230
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+G G V + D P A+K++ K K ++ + E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 85
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 86 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 145 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 202
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 203 DYYKKTT--NGRLPV 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+G G V + D P A+K++ K K ++ + E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 80
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 81 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 140 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNI 197
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 198 DYYKKTT--NGRLPV 210
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+G G V + D P A+K++ K K ++ + E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 139
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 140 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 199 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 256
Query: 179 TAFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 257 DYYKKTT--NGRLPV 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 127
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----DR 120
+ H + LLG+ D L V Y G+L L Y N +
Sbjct: 128 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186
Query: 121 VFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 246
Query: 181 FEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 247 YKKTT--NGRLPV 257
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 14 SLDLDNLKALKILGKGAMGTVFLVHDRAADPTARCPFALKVVD----KSTLHAKHEAERR 69
SLDLDNLK L+++G+G G V+ P A+KV ++ ++ K+
Sbjct: 9 SLDLDNLKLLELIGRGRYGAVY------KGSLDERPVAVKVFSFANRQNFINEKN----- 57
Query: 70 ARWEIRVLSRLSHPFLPKLLGSLE---TDEFLAW--AVPYCPGGDL-NVLRYKQNDRVFS 123
I + + H + + + E D + + + Y P G L L +D V S
Sbjct: 58 ----IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSS 113
Query: 124 P----SVIR--FYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLV 176
SV R YL + +H + I++RDL N+L++ G ++DF LS L
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDH-YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
+L + ++E + + Y G L + L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERM 133
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ E + KFP+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLAR-LIEDN--EXTARQGAKFPI 179
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 142
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R+++ K E S++N
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDK---EFDSVHNKTGAK 199
Query: 194 LPV 196
LPV
Sbjct: 200 LPV 202
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 78
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----DR 120
+ H + LLG+ D L V Y G+L L Y N +
Sbjct: 79 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 137
Query: 121 VFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 197
Query: 181 FEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 198 YKKTT--NGRLPV 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V + D P A+K++ K K ++ + E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEKDLSDLVSEMEM 93
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDL----------------NVLRYKQN 118
+ H + LLG+ D L V Y G+L ++ R +
Sbjct: 94 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 119 DRVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKK 178
F V Y ++ +E+L + +RDL N+L+ ++ + + DF L+R++
Sbjct: 153 QMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 179 TAFEKQSLNNNKFPV 193
++ + N + PV
Sbjct: 211 DYYKNTT--NGRLPV 223
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 75
Query: 75 -RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----D 119
+++ + H + LLG+ D L V Y G+L L Y N +
Sbjct: 76 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 193
Query: 180 AFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 194 YYKKTT--NGRLPV 205
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 86
Query: 75 -RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----D 119
+++ + H + LLG+ D L V Y G+L L Y N +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 180 AFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 205 YYKKTT--NGRLPV 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 86
Query: 75 -RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----D 119
+++ + H + LLG+ D L V Y G+L L Y N +
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKT 179
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 204
Query: 180 AFEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 205 YYKKTT--NGRLPV 216
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 79
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----DR 120
+ H + LLG+ D L V Y G+L L Y N +
Sbjct: 80 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 138
Query: 121 VFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 139 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 198
Query: 181 FEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 199 YKKTT--NGRLPV 209
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNM 144
+L + ++E + + Y G L + L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVV-SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERM 133
Query: 145 GIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 16 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 65
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 66 VQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 124
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ E + KFP+
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDN--EXTARQGAKFPI 169
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+L+H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 192 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 241
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 242 VQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 300
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 345
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 17 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 66
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 67 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 125
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 170
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRV 76
N+ ++ LG GA G V+ V DP+ P + V ++++ + E E +
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPS---PLQVAVKTLPEVYSEQD-ELDFLMEALI 101
Query: 77 LSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF----- 129
+S+ +H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 130 YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 192 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 241
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 242 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 300
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 345
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 141
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 198
Query: 194 LPV 196
LPV
Sbjct: 199 LPV 201
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 21/95 (22%)
Query: 115 YKQNDRVFSPSVIRFYLSEIICAIEHLH--------NMGIAYRDLKPENILIRQSGHVTL 166
Y Q + + S +R LS I + HLH IA+RDLK +NIL++++G +
Sbjct: 125 YLQLTTLDTVSCLRIVLS-IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 183
Query: 167 TDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPK 201
D L+ QS N L V NP+
Sbjct: 184 ADLGLA-------VMHSQSTNQ-----LDVGNNPR 206
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 85 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 142
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 143 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 199
Query: 194 LPV 196
LPV
Sbjct: 200 LPV 202
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 15 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 64
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 65 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 123
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 168
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 84 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 141
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 142 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 198
Query: 194 LPV 196
LPV
Sbjct: 199 LPV 201
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 200
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 257
Query: 194 LPV 196
LPV
Sbjct: 258 LPV 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 19 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 68
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 69 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 127
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 172
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 192 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 241
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 242 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 300
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 345
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+L+H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 89 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 146
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 147 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 203
Query: 194 LPV 196
LPV
Sbjct: 204 LPV 206
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 21/95 (22%)
Query: 115 YKQNDRVFSPSVIRFYLSEIICAIEHLH--------NMGIAYRDLKPENILIRQSGHVTL 166
Y Q + + S +R LS I + HLH IA+RDLK +NIL++++G +
Sbjct: 96 YLQLTTLDTVSCLRIVLS-IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 167 TDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPK 201
D L+ QS N L V NP+
Sbjct: 155 ADLGLA-------VMHSQSTNQ-----LDVGNNPR 177
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 76 VLSRLSHPFLPKLLG-SLETDEFLAWAVPYCPGGDL-NVLRYKQNDRVFSPSVIRFYLSE 133
++ SHP + LLG L ++ +PY GDL N +R + ++ +I F L +
Sbjct: 82 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK-DLIGFGL-Q 139
Query: 134 IICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+ ++ L + +RDL N ++ + V + DF L+R++ K E S++N
Sbjct: 140 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK---EFDSVHNKTGAK 196
Query: 194 LPV 196
LPV
Sbjct: 197 LPV 199
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 21/95 (22%)
Query: 115 YKQNDRVFSPSVIRFYLSEIICAIEHLH--------NMGIAYRDLKPENILIRQSGHVTL 166
Y Q + + S +R LS I + HLH IA+RDLK +NIL++++G +
Sbjct: 96 YLQLTTLDTVSCLRIVLS-IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI 154
Query: 167 TDFDLSRNLVKKTAFEKQSLNNNKFPVLPVTENPK 201
D L+ QS N L V NP+
Sbjct: 155 ADLGLA-------VMHSQSTNQ-----LDVGNNPR 177
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 250 GTEEYVSPEVVR---GDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK--- 303
G+ +++PEV+R + + F D +A GI+ YE++ G P+ N ++ ++ +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 304 TPEFVGQRTALTDLIQRL----LEKDPVKRLGYLRGACEIKE 341
+P+ R+ ++RL L+K +R + R EI+E
Sbjct: 232 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 37/160 (23%)
Query: 26 LGKGAMGTVFL------VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
+G G+ GTV+ V + + TA P L+ E+ VL +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN---------------EVGVLRK 64
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC--- 136
H + +G T LA +C G L Y S +F + ++I
Sbjct: 65 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSL----YHH----LHASETKFEMKKLIDIAR 115
Query: 137 ----AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+++LH I +RDLK NI + + V + DF L+
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 86
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----DR 120
+ H + LLG+ D L V Y G+L L Y N +
Sbjct: 87 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 145
Query: 121 VFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 181 FEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 206 YKKTT--NGRLPV 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 71
Query: 75 RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNV---------LRYKQN-----DR 120
+ H + LLG+ D L V Y G+L L Y N +
Sbjct: 72 MKMIG-KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEE 130
Query: 121 VFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTA 180
S + ++ +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 181 FEKQSLNNNKFPV 193
++K + N + PV
Sbjct: 191 YKKTT--NGRLPV 201
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 19/174 (10%)
Query: 26 LGKGAMGTVFLVHDRAAD-PTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPF 84
+G+G+ TV+ D A C + + KS +R + E L L HP
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-------ERQRFKEEAEXLKGLQHPN 86
Query: 85 LPKLLGSLET----DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEH 140
+ + S E+ + + G L Y + +V V+R + +I+ ++
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKT--YLKRFKVXKIKVLRSWCRQILKGLQF 144
Query: 141 LHNMG--IAYRDLKPENILIRQ-SGHVTLTDFDLSRNLVKKTAFEKQSLNNNKF 191
LH I +RDLK +NI I +G V + D L+ +K+ +F K + +F
Sbjct: 145 LHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA--TLKRASFAKAVIGTPEF 196
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 250 GTEEYVSPEVVR---GDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK--- 303
G+ +++PEV+R + + F D +A GI+ YE++ G P+ N ++ ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 304 TPEFVGQRTALTDLIQRL----LEKDPVKRLGYLRGACEIKE 341
+P+ R+ ++RL L+K +R + R EI+E
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 37/160 (23%)
Query: 26 LGKGAMGTVFL------VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
+G G+ GTV+ V + + TA P L+ E+ VL +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN---------------EVGVLRK 76
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC--- 136
H + +G T LA +C G L Y S +F + ++I
Sbjct: 77 TRHVNILLFMG-YSTAPQLAIVTQWCEGSSL----YHH----LHASETKFEMKKLIDIAR 127
Query: 137 ----AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+++LH I +RDLK NI + + V + DF L+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 250 GTEEYVSPEVVR---GDGHEFAVDWWALGILTYEMLYGTTPFRGKNRKETFRNVLMK--- 303
G+ +++PEV+R + + F D +A GI+ YE++ G P+ N ++ ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 304 TPEFVGQRTALTDLIQRL----LEKDPVKRLGYLRGACEIKE 341
+P+ R+ ++RL L+K +R + R EI+E
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 37/160 (23%)
Query: 26 LGKGAMGTVFL------VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSR 79
+G G+ GTV+ V + + TA P L+ E+ VL +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN---------------EVGVLRK 76
Query: 80 LSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIIC--- 136
H + +G T LA +C G L Y S +F + ++I
Sbjct: 77 TRHVNILLFMG-YSTKPQLAIVTQWCEGSSL----YHH----LHASETKFEMKKLIDIAR 127
Query: 137 ----AIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLS 172
+++LH I +RDLK NI + + V + DF L+
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 275 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 324
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 325 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM-AAQIASGMAYVERMN 383
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 428
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ ++ H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKIRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 20 LKALKILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
LK ++ LG+G G V L +D D T ++V L + R+ W EI +
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTG------EMVAVKALKEGCGPQLRSGWQREIEI 63
Query: 77 LSRLSHPFLPKLLGSLET--DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L L H + K G E ++ + + Y P L LR + + + +I
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP---LGSLRDYLPRHCVGLAQLLLFAQQI 120
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +LH +R L N+L+ V + DF L++
Sbjct: 121 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 20 LKALKILGKGAMGTVFL-VHDRAADPTARCPFALKVVDKSTLHAKHEAERRARW--EIRV 76
LK ++ LG+G G V L +D D T ++V L + R+ W EI +
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTG------EMVAVKALKEGCGPQLRSGWQREIEI 64
Query: 77 LSRLSHPFLPKLLGSLET--DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEI 134
L L H + K G E ++ + + Y P L LR + + + +I
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP---LGSLRDYLPRHCVGLAQLLLFAQQI 121
Query: 135 ICAIEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSR 173
+ +LH +R L N+L+ V + DF L++
Sbjct: 122 CEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 26 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 75
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 76 VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM-AAQIASGMAYVERMN 134
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 179
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
R FS + ++I IE++H+ +RD+KP+N L+ ++ V + DF L++
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+ +H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
R FS + ++I IE++H+ +RD+KP+N L+ ++ V + DF L++
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 120 RVFSPSVIRFYLSEIICAIEHLHNMGIAYRDLKPENILI---RQSGHVTLTDFDLSR 173
R FS + ++I IE++H+ +RD+KP+N L+ ++ V + DF L++
Sbjct: 98 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 26 LGKGAMGTVFLVHDRAADPTARCPFALKVVDKSTLHAKHEAERRARWEIRVLSRLSHPFL 85
LG+G G V++ + T R A+K + T+ + + E +V+ +L H L
Sbjct: 23 LGQGCFGEVWM---GTWNGTTR--VAIKTLKPGTMSPEAFLQ-----EAQVMKKLRHEKL 72
Query: 86 PKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRFYLSEIICAIEHLHNMG 145
+L + + G L+ L+ + + P ++ ++I + ++ M
Sbjct: 73 VQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS-AQIASGMAYVERMN 131
Query: 146 IAYRDLKPENILIRQSGHVTLTDFDLSRNLVKKTAFEKQSLNNNKFPV 193
+RDL+ NIL+ ++ + DF L+R L++ + + KFP+
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTAR--QGAKFPI 176
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 27/196 (13%)
Query: 18 DNLKALKILGKGAMGTVFLVHDRAAD---PTARCPFALKVVDKSTLHAKHEAERRARWEI 74
D L K LG+GA G V L D P A+K++ KS K ++ + E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML-KSDATEKDLSDLISEMEM 86
Query: 75 -RVLSRLSHPFLPKLLGSLETDEFLAWAVPYCPGGDLNVLRYKQNDR------VFSPS-V 126
+++ + H + LLG+ D L V Y G+L Y Q R F+PS
Sbjct: 87 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLR--EYLQARRPPGLEFSFNPSHN 142
Query: 127 IRFYLSE---IICA------IEHLHNMGIAYRDLKPENILIRQSGHVTLTDFDLSRNLVK 177
LS + CA +E+L + +RDL N+L+ + + + DF L+R++
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 178 KTAFEKQSLNNNKFPV 193
+K + N + PV
Sbjct: 203 IDXXKKTT--NGRLPV 216
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.0 bits (79), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 116 KQNDRVFSPSVIRFYLSEIICAIEHLHNMG-IAYRDLKPENILIRQSGHVTLTDFDLSRN 174
K N + ++ + +++ +++LH I + D+KPENIL+ ++
Sbjct: 121 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL-----------SVNEQ 169
Query: 175 LVKKTAFEKQSLNNNKFPV---LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSP 231
+++ A E + P V+ P L L P+N LK K A +
Sbjct: 170 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLE--PKNAEKLK-VKIADLGN 226
Query: 232 VSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGK 291
+ F + T +Y S EV+ G G+ D W+ + +E+ G F
Sbjct: 227 ACWVHKHFTED------IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 280
Query: 292 NRKETFRN 299
+ +E R+
Sbjct: 281 SGEEYTRD 288
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+ +H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 116 KQNDRVFSPSVIRFYLSEIICAIEHLHNMG-IAYRDLKPENILIRQSGHVTLTDFDLSRN 174
K N + ++ + +++ +++LH I + D+KPENIL+ ++
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILL-----------SVNEQ 185
Query: 175 LVKKTAFEKQSLNNNKFPV---LPVTENPKRHRRILTRWLHALPENKTGLKKTKSARVSP 231
+++ A E + P V+ P L L P+N LK K A +
Sbjct: 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLE--PKNAEKLK-VKIADLGN 242
Query: 232 VSRRQQSFDNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFRGK 291
+ F + T +Y S EV+ G G+ D W+ + +E+ G F
Sbjct: 243 ACWVHKHFTED------IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296
Query: 292 NRKETFRN 299
+ +E R+
Sbjct: 297 SGEEYTRD 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+ +H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 19 NLKALKILGKGAMGTVF--LVHDRAADPTARCPFALKVVDKSTLHAKHEA-ERRARWEIR 75
N+ ++ LG GA G V+ V DP+ L+V K+ E E E
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSP-----LQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 76 VLSRLSHPFLPKLLG-SLET-DEFLAWAVPYCPGGDLNVLRYKQNDRVFSPSVIRF---- 129
++S+ +H + + +G SL++ F+ + GGDL + R PS +
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLEL--MAGGDLKSFLRETRPRPSQPSSLAMLDLL 150
Query: 130 -YLSEIICAIEHLHNMGIAYRDLKPENILIRQSGH---VTLTDFDLSRNLVKKTAFEK 183
+I C ++L +RD+ N L+ G + DF ++R++ + + + K
Sbjct: 151 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,048,079
Number of Sequences: 62578
Number of extensions: 518058
Number of successful extensions: 3923
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 2086
length of query: 412
length of database: 14,973,337
effective HSP length: 101
effective length of query: 311
effective length of database: 8,652,959
effective search space: 2691070249
effective search space used: 2691070249
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)