Your job contains 1 sequence.
>042542
MAFRRRAEPKMASSMKKTNSLFFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPK
GYVVRIGITKKEGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQY
PSRNMFPPSRQNQATVNSSKSKNGCKMQSKTYRMEELEVNDELDNVNDSIQDIIGTSNSE
GSVHAKVHLSETQCLSVQETDLKIDSTKFKKAKHNLKYELRADSVDQIKSIALLEDMDTY
DCESRMTLEEKQEAINVARFLKPEKPSFLVFLRASNMQLNCVYVPNSFARKYFNGEECVT
IQDSDGRKLAVKVKVSCSKCLLTRWGKFFKKTNVKEGDILFFEMIQMKNILLKVSVFNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042542
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085849 - symbol:VRN1 "REDUCED VERNALIZATION R... 388 5.7e-36 1
TAIR|locus:2085859 - symbol:AT3G18960 species:3702 "Arabi... 249 3.9e-24 2
TAIR|locus:2133362 - symbol:AT4G01580 species:3702 "Arabi... 250 2.4e-21 1
TAIR|locus:504956318 - symbol:AT1G49475 species:3702 "Ara... 221 5.0e-18 1
TAIR|locus:2010262 - symbol:RTV1 "AT1G49480" species:3702... 164 3.8e-11 1
TAIR|locus:2124879 - symbol:AT4G31640 species:3702 "Arabi... 109 2.5e-06 2
TAIR|locus:2052991 - symbol:AT2G16210 species:3702 "Arabi... 111 7.8e-06 2
TAIR|locus:2161533 - symbol:VDD "VERDANDI" species:3702 "... 120 9.3e-06 2
TAIR|locus:2063434 - symbol:AT2G35310 species:3702 "Arabi... 129 9.8e-06 1
TAIR|locus:2172319 - symbol:AT5G18090 species:3702 "Arabi... 107 2.0e-05 2
TAIR|locus:2126016 - symbol:MEE45 "maternal effect embryo... 92 4.7e-05 2
TAIR|locus:2124839 - symbol:AT4G31690 species:3702 "Arabi... 128 8.0e-05 2
TAIR|locus:2119166 - symbol:AT4G33280 species:3702 "Arabi... 120 0.00015 1
TAIR|locus:2172590 - symbol:AT5G57720 species:3702 "Arabi... 85 0.00015 2
TAIR|locus:2047241 - symbol:AT2G24700 species:3702 "Arabi... 88 0.00047 2
TAIR|locus:2144831 - symbol:AT5G09780 species:3702 "Arabi... 97 0.00077 2
>TAIR|locus:2085849 [details] [associations]
symbol:VRN1 "REDUCED VERNALIZATION RESPONSE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0010048
"vernalization response" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010048 GO:GO:0009909 EMBL:AP000735
UniGene:At.27524 UniGene:At.24480 HOGENOM:HOG000005864
EMBL:AF289051 EMBL:AF289052 EMBL:BT024731 EMBL:AK230388
EMBL:AB493620 IPI:IPI00546581 RefSeq:NP_188529.2 PDB:4I1K
PDBsum:4I1K ProteinModelPortal:Q8L3W1 SMR:Q8L3W1 IntAct:Q8L3W1
STRING:Q8L3W1 PaxDb:Q8L3W1 PRIDE:Q8L3W1 DNASU:821432
EnsemblPlants:AT3G18990.1 GeneID:821432 KEGG:ath:AT3G18990
TAIR:At3g18990 eggNOG:NOG315946 InParanoid:Q8L3W1 OMA:EINSSAP
PhylomeDB:Q8L3W1 ProtClustDB:CLSN2679965 Genevestigator:Q8L3W1
Uniprot:Q8L3W1
Length = 341
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 106/350 (30%), Positives = 183/350 (52%)
Query: 22 FFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVVRIGITKKEGKIWFDDGW 81
F ++I + TI++K++++P FV +F DELS LT P G+V R+G+ K + KIWF DGW
Sbjct: 6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGW 65
Query: 82 NEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSRQNQATVNSSKS 141
EFV +SI +GY ++F+Y NS F V++FN + EI Y S + + N K
Sbjct: 66 QEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAH------NHFK- 118
Query: 142 KNGCKMQSKTYRMEELEVNDELDNVNDSIQDIIGTSNSEGSVHA-KVHLSET-QCLSVQE 199
+++ + E+LE +++ + + S + + E +V A K + S Q L
Sbjct: 119 ------RARLF--EDLE-DEDAEVIFPS--SVYPSPLPESTVPANKGYASSAIQTLFTGP 167
Query: 200 TDLKIDSTKFKKAKHNLKYELRADSVDQIKSIALLED-----MDTYDCESR----MTLEE 250
+ + K K + + AD ++I S A +D Y+ S +T EE
Sbjct: 168 VKAEEPTPTPKIPKKRGRKKKNADP-EEINSSAPRDDDPENRSKFYESASARKRTVTAEE 226
Query: 251 KQEAINVARFLKPEKPSFLVFLRASNMQLNCV-YVPNSFARKYFNG-EECVTIQDSDGRK 308
++ AIN A+ +P P F V LR S + C+ Y+P+ FA KY +G + +Q ++ ++
Sbjct: 227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQ 285
Query: 309 LAVKVKVSCSKCLLTR-WGKFFKKTNVKEGDILFFEMIQMKNILLKVSVF 357
V+ + ++ W +F + N+ EGD+ FE+++ ++ +LKV+ F
Sbjct: 286 WPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAF 335
>TAIR|locus:2085859 [details] [associations]
symbol:AT3G18960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AP000735 UniGene:At.34404 UniGene:At.66475
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT006139
EMBL:BT008541 EMBL:AK229681 IPI:IPI00539394 RefSeq:NP_188526.2
ProteinModelPortal:Q84R27 SMR:Q84R27 IntAct:Q84R27
EnsemblPlants:AT3G18960.1 GeneID:821429 KEGG:ath:AT3G18960
TAIR:At3g18960 PhylomeDB:Q84R27 Genevestigator:Q84R27
Uniprot:Q84R27
Length = 209
Score = 249 (92.7 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 49/117 (41%), Positives = 75/117 (64%)
Query: 5 RRAEPKMASSMKKTNSLFFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVV 64
RR++ S +KK FF+++L T++DK MKIP FV G +LS V TL P G+
Sbjct: 17 RRSQQDPESPVKK----FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKR 72
Query: 65 RIGITKKEGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYP 121
I + + +IWF +GW+EF + HSI G+F++F+Y++NS F+V +FN + E +YP
Sbjct: 73 SIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129
Score = 42 (19.8 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
Identities = 10/39 (25%), Positives = 25/39 (64%)
Query: 129 SRQNQATVNSSKSKNGCKMQSKTYRMEELEVNDELDNVN 167
+R+N +VN +++ K +S+ ++++ ++D LD +N
Sbjct: 156 TRKNNQSVNGGDTEHKSKKRSRDIELDKI-LHD-LDVMN 192
>TAIR|locus:2133362 [details] [associations]
symbol:AT4G01580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161492 EMBL:AF104919 UniGene:At.34404
HOGENOM:HOG000155078 ProtClustDB:CLSN2685511 EMBL:BT010604
EMBL:AK175333 IPI:IPI00544726 PIR:T02015 RefSeq:NP_192068.1
ProteinModelPortal:Q9ZSH7 SMR:Q9ZSH7 IntAct:Q9ZSH7 STRING:Q9ZSH7
EnsemblPlants:AT4G01580.1 GeneID:828118 KEGG:ath:AT4G01580
TAIR:At4g01580 PhylomeDB:Q9ZSH7 Genevestigator:Q9ZSH7
Uniprot:Q9ZSH7
Length = 190
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 49/117 (41%), Positives = 74/117 (63%)
Query: 5 RRAEPKMASSMKKTNSLFFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVV 64
R+++ S +KK FF+++L T++DK M+IP FV G +LS V TL P GY
Sbjct: 17 RQSQQDPESPVKK----FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKR 72
Query: 65 RIGITKKEGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYP 121
I + + +IWF +GW+EF + HSI G+F++F+Y+KNS F+V +FN + E YP
Sbjct: 73 SIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129
>TAIR|locus:504956318 [details] [associations]
symbol:AT1G49475 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:BX817688 IPI:IPI00524854
PIR:D96531 RefSeq:NP_683415.2 UniGene:At.49960
ProteinModelPortal:Q9XIB4 SMR:Q9XIB4 EnsemblPlants:AT1G49475.1
GeneID:841371 KEGG:ath:AT1G49475 TAIR:At1g49475 eggNOG:NOG287861
HOGENOM:HOG000155078 OMA:PRVNIKS PhylomeDB:Q9XIB4
ProtClustDB:CLSN2685511 Genevestigator:Q9XIB4 Uniprot:Q9XIB4
Length = 190
Score = 221 (82.9 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 46/120 (38%), Positives = 73/120 (60%)
Query: 2 AFRRRAEPKMASSMKKTNSLFFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKG 61
A +RR +P+ ++KK F ++IL I +K MK+P FV RFG +L+ TL P G
Sbjct: 18 ATQRRLKPEPEPTVKK----FIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVG 72
Query: 62 YVVRIGITKKEGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYP 121
+ I I + ++WF+ GW+EF + HS+ G+F+ F Y +S F+V +F+ + EI+YP
Sbjct: 73 FKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYP 132
>TAIR|locus:2010262 [details] [associations]
symbol:RTV1 "AT1G49480" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032880 "regulation of protein localization" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0034613 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007504 EMBL:AY042868 EMBL:BT015682
IPI:IPI00517706 PIR:E96531 RefSeq:NP_564547.1 UniGene:At.24480
UniGene:At.70635 ProteinModelPortal:Q9XIB5 SMR:Q9XIB5 PaxDb:Q9XIB5
PRIDE:Q9XIB5 EnsemblPlants:AT1G49480.1 GeneID:841372
KEGG:ath:AT1G49480 TAIR:At1g49480 eggNOG:NOG265541
HOGENOM:HOG000005864 InParanoid:Q9XIB5 OMA:FKESKAE PhylomeDB:Q9XIB5
ProtClustDB:CLSN2917203 Genevestigator:Q9XIB5 Uniprot:Q9XIB5
Length = 226
Score = 164 (62.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 34/115 (29%), Positives = 66/115 (57%)
Query: 246 MTLEEKQEAINVARFLKPEKPSFLVFLRASNMQLNCV-YVPNSFARKYFNG-EECVTIQD 303
+T EE++ A+N A+ +P P F V LR S + C+ Y+P+ FA KY +G + +Q
Sbjct: 107 VTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQL 166
Query: 304 SDGRKLAVKVKVSCSKCLLTR-WGKFFKKTNVKEGDILFFEMIQMKNILLKVSVF 357
+ ++ V+ + ++ W +F + N+ EGD+ FE+++ ++ +L+V+ F
Sbjct: 167 GE-KQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAF 220
>TAIR|locus:2124879 [details] [associations]
symbol:AT4G31640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 EMBL:AJ441074 EMBL:AY142531 EMBL:AB493714
IPI:IPI00528633 PIR:T05106 RefSeq:NP_194892.1 UniGene:At.31730
ProteinModelPortal:Q9SB80 SMR:Q9SB80 EnsemblPlants:AT4G31640.1
GeneID:829292 KEGG:ath:AT4G31640 TAIR:At4g31640 eggNOG:NOG265345
InParanoid:Q9SB80 OMA:LQLGDLC PhylomeDB:Q9SB80
Genevestigator:Q9SB80 Uniprot:Q9SB80
Length = 352
Score = 109 (43.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/151 (27%), Positives = 67/151 (44%)
Query: 22 FFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVVR-IGITKKEGKIWFDDG 80
FFQ IL +KIP F + E + + Y R K EG +G
Sbjct: 14 FFQPILPGF--KSHIKIPVKFFSKH-IEGKHEGNTVYLRSYPSRRTWKVKMEGHK-LTEG 69
Query: 81 WNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQY-PSRNMFPPSRQNQATVNSS 139
W EFV+ H + VG FVVF+++ + F V + E+QY PSR+ R ++
Sbjct: 70 WKEFVEAHDLRVGDFVVFKHKGDMLFHVTAIGPSCCEVQYAPSRSH---DRNEESDEIGE 126
Query: 140 KSKNGCKMQSKTYRMEELEVNDELDNVNDSI 170
S+N K+ + + E + + +L + S+
Sbjct: 127 SSRNE-KIIEENVKTEPDQFSPDLTCFSQSV 156
Score = 69 (29.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 263 PEKPSFLVFLRASNMQLNCVYVPNSFARKY-FN-GEECVTIQDSDGRKLAVKVK-VSCSK 319
P+ F + ASN+ + V +P FA++Y N G + + D +G +VK +
Sbjct: 147 PDLTCFSQSVTASNLTRDLVGIPRDFAKRYGLNIGRHEIVLMDEEGNTWESEVKSYKSGR 206
Query: 320 CLLTR-WGKFFKKTNVKEGDILFFEMIQMKNI 350
+ W ++ GD F++++ I
Sbjct: 207 VFIAGGWTSLCTANKLEVGDSCTFKLLRNPKI 238
>TAIR|locus:2052991 [details] [associations]
symbol:AT2G16210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007134 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AY247810 EMBL:AY247811 EMBL:AY924741
IPI:IPI00517726 IPI:IPI00548228 PIR:H84537 RefSeq:NP_179217.2
RefSeq:NP_973471.1 UniGene:At.40304 ProteinModelPortal:Q5BPT7
SMR:Q5BPT7 EnsemblPlants:AT2G16210.1 GeneID:816118
KEGG:ath:AT2G16210 TAIR:At2g16210 eggNOG:NOG329060
InParanoid:Q5BPT7 OMA:VKEYPLA PhylomeDB:Q5BPT7
Genevestigator:Q5BPT7 Uniprot:Q5BPT7
Length = 291
Score = 111 (44.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 32/120 (26%), Positives = 59/120 (49%)
Query: 16 KKTNSLFFQVILAVTIE-DKKMKIPQNFVGRFGD-ELSYVATLTNPKGYVVRIGITKKEG 73
++ N FF+V+ ++ + + K +P +F F D ELS + G +GI+K
Sbjct: 13 ERKNESFFKVVQSINVSSENKRALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNP- 71
Query: 74 KIWFDD--GWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYP--SRNMFPPS 129
+ +F + GW +FV+ +++G + F ++ F V +F E+ P SR+ F S
Sbjct: 72 RFYFMEKSGWEKFVRDNALGNSELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASS 131
Score = 59 (25.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 26/92 (28%), Positives = 39/92 (42%)
Query: 265 KPSFLVFLRASNMQLNCVYVPNSFARKYFNGEECV-TIQDSDGRKLAVKVKVSCSKCLLT 323
K +LVFLR +PNS ++ E+ V I +G+K V +
Sbjct: 208 KQGYLVFLR----------IPNSVSKDQVPDEKTVFKIHHPNGKKSWNVVYLERFGAFSG 257
Query: 324 RWGKFFKKTNVKEGDILFFEMIQMKNILLKVS 355
W + K+ + GD F I+ K +LL VS
Sbjct: 258 GWRRVVKEYPLAVGDTCKFTFIKPKELLLVVS 289
>TAIR|locus:2161533 [details] [associations]
symbol:VDD "VERDANDI" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009553 GO:GO:0009567 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:AB015473 UniGene:At.19968
UniGene:At.71230 EMBL:AK227035 IPI:IPI00525697 RefSeq:NP_197301.1
ProteinModelPortal:Q9FJG2 SMR:Q9FJG2 EnsemblPlants:AT5G18000.1
GeneID:831667 KEGG:ath:AT5G18000 TAIR:At5g18000 eggNOG:NOG257290
InParanoid:Q9FJG2 OMA:FTHEANM PhylomeDB:Q9FJG2
Genevestigator:Q9FJG2 Uniprot:Q9FJG2
Length = 307
Score = 120 (47.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 48/202 (23%), Positives = 89/202 (44%)
Query: 16 KKTNSLFFQVILAVTIEDKKMK-IPQNFVGRFGDELS-YVATLTNPKGYVVRIGITKKEG 73
++ N FF+++ + M+ IP + + D+ S + L P G ++ I+K
Sbjct: 14 ERDNPAFFKILRREDHSTEMMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPN 73
Query: 74 KIWFDD-GWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSRQN 132
+ +D GWN+FV + +G ++ F + N FN T FE M P +
Sbjct: 74 FHYMEDRGWNQFVNDNGLGENEYLTFTHEAN-----MCFNVTIFEAD--GTEMLRPRK-- 124
Query: 133 QATVNSSKSKNGCKMQSKTYRMEELEVNDELDNVNDSIQDIIGTSNS-EGSVHAKVHLSE 191
T+ SS +N + + Y+ +++ +E+++ ++S T+ S G + K L+
Sbjct: 125 --TITSSSGRNKREERKSIYK--DVKKEEEIESWSESSHPCHKTAESTSGRLTQKQELN- 179
Query: 192 TQCLSVQETDLKIDSTKFKKAK 213
L +E D S KK K
Sbjct: 180 ---LRKKEADKTEKSKTSKKKK 198
Score = 49 (22.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 325 WGKFFKKTNVKEGDILFFEMIQMKNILLKVS 355
W + K+ + GD+ F++I+ + +KVS
Sbjct: 275 WSRLAKELGLLVGDVCTFKLIKPTEMRVKVS 305
>TAIR|locus:2063434 [details] [associations]
symbol:AT2G35310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC004667 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT002032 EMBL:BT020353 EMBL:BT021085
IPI:IPI00525483 PIR:A84767 RefSeq:NP_181074.2 UniGene:At.37682
ProteinModelPortal:Q5PNU4 PRIDE:Q5PNU4 EnsemblPlants:AT2G35310.1
GeneID:818098 KEGG:ath:AT2G35310 TAIR:At2g35310 eggNOG:NOG312915
InParanoid:Q5PNU4 OMA:KARWGSS PhylomeDB:Q5PNU4
Genevestigator:Q5PNU4 Uniprot:Q5PNU4
Length = 288
Score = 129 (50.5 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 51/193 (26%), Positives = 90/193 (46%)
Query: 5 RRAEPKMASSMKKTNSLFFQVILAVTIEDKKMK-IPQNFVGRFGD-ELSYVATLTNPKGY 62
R ++ M +K S FF+V+ V I + M+ +P +FV F + ELS + G
Sbjct: 3 RNSDNDMCKEERKRES-FFKVLQRVDISSENMRALPYDFVRSFSNNELSRKMKIKARWGS 61
Query: 63 VVRIGITKKEGKIWFDD--GWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQY 120
+ I K + +F + GW +FV +++G F+ F ++ N +F V +F E+
Sbjct: 62 SWEVEICKNP-RFYFMEKSGWEKFVSDNALGASEFLTFTHKGNMRFTVNIFMQDGKEMLQ 120
Query: 121 PSRNM-F-----PPSRQ----NQATVNSSKSKNGC----KMQSKTYRMEELEVNDELDNV 166
P ++M F PP R+ + AT +++S G K+ + + EE + D V
Sbjct: 121 PPQSMSFMASSRPPKREQGIPSLATTIAAESNGGGNYKRKLNFEKKKAEESHNSKRTDKV 180
Query: 167 NDSIQDIIGTSNS 179
++ G S+S
Sbjct: 181 FSVQRESAGASSS 193
>TAIR|locus:2172319 [details] [associations]
symbol:AT5G18090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB012246 HOGENOM:HOG000131629
ProtClustDB:CLSN2681146 EMBL:BT004099 EMBL:BT005553 EMBL:AY087853
IPI:IPI00536965 RefSeq:NP_197310.1 UniGene:At.31471
ProteinModelPortal:Q9FK61 SMR:Q9FK61 EnsemblPlants:AT5G18090.1
GeneID:831636 KEGG:ath:AT5G18090 TAIR:At5g18090 eggNOG:NOG305722
InParanoid:Q9FK61 OMA:FCAGWIR PhylomeDB:Q9FK61
Genevestigator:Q9FK61 Uniprot:Q9FK61
Length = 301
Score = 107 (42.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 42/204 (20%), Positives = 94/204 (46%)
Query: 19 NSLFFQVILAVTIEDKKMK-IPQNFVGRFGDE-LSYVATLTNPKGYVVRIGITKKEGKIW 76
N FF+++ + + + M+ IP NF+ +E LS L G I I + +
Sbjct: 15 NPGFFKILRSADLSSEIMRGIPLNFIKSISEEELSAKMLLKVSWGSSWPIKICRNPSFYF 74
Query: 77 FDD-GWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSRQNQAT 135
+ GW++F+ + +G F+ F ++ N F V ++ Q + + P R AT
Sbjct: 75 MEKKGWDQFLSDNGLGNDEFLTFTHQGNMCFTVDIY-------QIDGKELLTPRRS--AT 125
Query: 136 VNSSKSKNGCKMQSKTYRMEELEVNDELDNVNDSIQDIIGTSNSEGSVHAKVHLSETQCL 195
+ SS +N + ++ Y+ +++ +++++ ++S T+ S G ++ LS +
Sbjct: 126 IASSSGRNKREQRNNIYK--DVKEEEDIESWSESSYPGHKTAESTGR-RQRLSLSNKKAK 182
Query: 196 SVQETD---LKIDSTKFKKAKHNL 216
+++ +K++S + +L
Sbjct: 183 ETEKSKKKKMKVESISYDSQDDSL 206
Score = 60 (26.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 266 PSFLVFLRASNMQLNCVYVPNSFARKYFNGEECV-TIQDSDG-RKLAVKVKVSCSKC-LL 322
P F + ++ S L + +P F + E + I D +G R V K S ++
Sbjct: 210 PEFTLTIKKS--YLIFLGIPKMFEELHMPTEATMFKIHDPEGKRSWDVMYKFSNNQTRFC 267
Query: 323 TRWGKFFKKTNVKEGDILFFEMIQMKNILLKVS 355
W + K+ ++ GD+ F +I+ +L++VS
Sbjct: 268 AGWIRLAKELGLEIGDVCTFTLIKPTEMLVRVS 300
>TAIR|locus:2126016 [details] [associations]
symbol:MEE45 "maternal effect embryo arrest 45"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0009793 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AF013293 EMBL:AF195115 EMBL:AL161471
HOGENOM:HOG000154088 IPI:IPI00542107 PIR:T01545 RefSeq:NP_567162.2
UniGene:At.54056 ProteinModelPortal:O23076 SMR:O23076 PaxDb:O23076
PRIDE:O23076 EnsemblPlants:AT4G00260.1 GeneID:828225
KEGG:ath:AT4G00260 TAIR:At4g00260 InParanoid:O23076 OMA:AHITRSS
PhylomeDB:O23076 ProtClustDB:CLSN2680937 Genevestigator:O23076
Uniprot:O23076
Length = 528
Score = 92 (37.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 37/161 (22%), Positives = 77/161 (47%)
Query: 205 DSTKFKKAKHNLKYELRA---DSVDQIKSIALLEDMDTYDCESRMTLEEKQEAI--NVAR 259
D+ FK K LR + ++ ++L E+ ++ D E + +++E + NV R
Sbjct: 210 DNYTFKLIKRAGTLVLRLLPNEPKEEANEVSLPEEPES-DAERNLEKIQRKEKVKKNVTR 268
Query: 260 FLKP--EKPS-FLVFLRASNMQLNCVYVPNSFARKYFNGEEC--VTIQDSDGRK--LAVK 312
+ + PS F+ + S+++ + +Y+P F R+ + C + + + G+ L +K
Sbjct: 269 EAESSSQDPSCFVANVSPSSLRYDTLYLPKRFMRENGVDKRCGEMILINEKGKSWTLDLK 328
Query: 313 VKVSCSKCLLTR-WGKFFKKTNVKEGDILFFEMIQMKNILL 352
VK S L+ R W F ++ G I+ ++I+ + L+
Sbjct: 329 VKKSSGTSLIKRGWRSFCSANGLRAGSIITLKLIKKRATLV 369
Score = 80 (33.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 50 LSYVATLTNPKGYVVRIGITKKEGKIWFD-----DGWNEFVQYHSIGVGYFVVFQYRKNS 104
L Y+ K +R +K+ ++ D DGW EF H + +G VVF+ +
Sbjct: 26 LKYIEGRYEQKTAKLRSDASKRTWEVKIDGQRLTDGWKEFAVSHDLRIGDIVVFRQESDL 85
Query: 105 KFQVFVFNTTTFEIQYPS 122
F V + + IQY S
Sbjct: 86 AFHVTLLGPSCCGIQYGS 103
>TAIR|locus:2124839 [details] [associations]
symbol:AT4G31690 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0009941 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL161579 EMBL:AL031004 HOGENOM:HOG000154088
HSSP:Q9FX77 eggNOG:NOG262844 ProtClustDB:CLSN2685879 EMBL:AJ441294
IPI:IPI00526797 PIR:T05101 RefSeq:NP_194897.1 UniGene:At.31723
ProteinModelPortal:O81778 SMR:O81778 EnsemblPlants:AT4G31690.1
GeneID:829297 KEGG:ath:AT4G31690 TAIR:At4g31690 InParanoid:O81778
PhylomeDB:O81778 Genevestigator:O81778 Uniprot:O81778
Length = 461
Score = 128 (50.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 36/110 (32%), Positives = 50/110 (45%)
Query: 12 ASSMKKTNSLFFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVVRIGITKK 71
AS + TN FFQ +L +KIP N+ + T+T R K
Sbjct: 4 ASPLSPTNQHFFQPLLPGF--QSNLKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKM 61
Query: 72 EGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYP 121
EG +GW EFV+ H + +G FVVF++ + F V + EIQYP
Sbjct: 62 EGHR-LTEGWKEFVEAHDLRIGDFVVFRHEGDMVFHVTALGPSCCEIQYP 110
Score = 37 (18.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 283 YVPNSFARK--YFNGEECVTIQDSDGRKLAVKVKVSCSKCLL----TRWGKFFKKTNVKE 336
++P SF + N + + + D D + ++ +KV + W F V
Sbjct: 246 HLPLSFTKVNGLINPGKIILV-DKDRAEWSMMLKVDSRGAVYIIGGNDWKSFCAANEVGA 304
Query: 337 GDILFFEMIQ 346
G+ L E+IQ
Sbjct: 305 GESLALELIQ 314
>TAIR|locus:2119166 [details] [associations]
symbol:AT4G33280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005773 "vacuole" evidence=IDA] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 GO:GO:0005634 GO:GO:0005773
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AJ441117 IPI:IPI00520178
PIR:T05979 RefSeq:NP_195054.2 UniGene:At.31598
ProteinModelPortal:Q8RYD1 SMR:Q8RYD1 EnsemblPlants:AT4G33280.1
GeneID:829464 KEGG:ath:AT4G33280 TAIR:At4g33280 eggNOG:NOG318846
HOGENOM:HOG000154089 InParanoid:Q8RYD1 OMA:EMISAGS PhylomeDB:Q8RYD1
ProtClustDB:CLSN2918854 Genevestigator:Q8RYD1 Uniprot:Q8RYD1
Length = 337
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 46/175 (26%), Positives = 77/175 (44%)
Query: 35 KMKIPQNFVGRFGDELSYVATLTNPKGYVVRIGITKKEGKIW-FDDGWNEFVQYHSIGVG 93
++ IP+ F +L + TL +P G +G+ + + K F GW++FV+ HS+
Sbjct: 36 RLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEN 95
Query: 94 YFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSRQNQATVNSSKSKNGCKMQSKTYR 153
+VF++ S+F+V VF+ T + P+ + F R+ + S G Y
Sbjct: 96 DLLVFKFHGVSEFEVLVFDGQTL-CEKPT-SYFV--RKCGHAEKTKASHTG-------YE 144
Query: 154 MEELEVNDELDNVNDSIQDIIGTSN---SEGSVHAKVHLSETQCLSVQETDLKID 205
EE +N ++D + + I TS SEG + LS D K D
Sbjct: 145 QEE-HINSDIDTASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKAD 198
>TAIR|locus:2172590 [details] [associations]
symbol:AT5G57720 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB018118 HSSP:Q9FX77 HOGENOM:HOG000097078
EMBL:AB493797 IPI:IPI00525099 RefSeq:NP_200580.1 UniGene:At.55606
ProteinModelPortal:Q9FHH1 EnsemblPlants:AT5G57720.1 GeneID:835879
KEGG:ath:AT5G57720 TAIR:At5g57720 eggNOG:NOG307619
InParanoid:Q9FHH1 OMA:KIFNSHE PhylomeDB:Q9FHH1
ProtClustDB:CLSN2916925 Genevestigator:Q9FHH1 Uniprot:Q9FHH1
Length = 300
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/116 (18%), Positives = 57/116 (49%)
Query: 243 ESRMTLEEKQEAI-NVARFLKPEKPSFLVFLRASNMQLNCVYVPNSFARKY-FNGEECVT 300
+ R+T + + +++ ++ + P+ F+ S+ + + + Y N + V
Sbjct: 181 KGRVTRKHRDDSLASITPQIFLADPNNPFFISTSSCSRRILVIARQVIKDYGLNFDGTVN 240
Query: 301 IQDSDGRKLAVKVKVSCSKCLLTRWGKFFKKTNVKEGDILFFEMIQMKNILLKVSV 356
+ D G +L KV + ++ +W + F + VK+GD++ E+I+ ++++ + V
Sbjct: 241 LIDGFG-ELTRKVGKWKDRVVIYKWNEMFTRNKVKQGDVIICEIIREEDVVRSIKV 295
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 32 EDKKMK-IPQNFVGRFGDELSYVATLTNPKGYVVRIGITK-KEGKIWFDDGWNEFVQYHS 89
ED ++ IP+++ + + L A L NP+G + TK +E I +GW +FV+ +
Sbjct: 21 EDSQLLVIPRSYNRYYPNPLPQTAVLKNPEGRFWNVQWTKSQEVIISLQEGWVKFVKDNG 80
Query: 90 IGVGYFVVFQYRKNSKFQV 108
+ F++F Y + F V
Sbjct: 81 LIDRDFLLFTYDGSRSFWV 99
>TAIR|locus:2047241 [details] [associations]
symbol:AT2G24700 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC007266 EMBL:BX819051 IPI:IPI00529810
PIR:H84639 RefSeq:NP_180046.2 UniGene:At.50095
ProteinModelPortal:P0DH85 SMR:P0DH85 PRIDE:P0DH85 GeneID:817006
KEGG:ath:AT2G24700 TAIR:At2g24700 HOGENOM:HOG000154088 OMA:RSDASEM
PhylomeDB:P0DH85 Uniprot:P0DH85
Length = 555
Score = 88 (36.0 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 28/118 (23%), Positives = 55/118 (46%)
Query: 234 LEDMDTYDCESRMTLEEKQEAINVARFLKPEKPSFLVFLRASNMQLNCVYVPNSFARKYF 293
+ED+D R + + + A + P+ SF+ + ASN+ + +Y+P +F
Sbjct: 248 IEDLDKLQSLPRHKIRKTEAAPS-----SPDLSSFVATVTASNLSRDRLYLPKTFIMS-- 300
Query: 294 NG-----EECVTIQDSDGRKLAVKVKVSCSKCLLTR-WGKFFKKTNVKEGDILFFEMI 345
NG + C+ ++ + + VK + + L R W +F K GD+L F+++
Sbjct: 301 NGLLKKFQMCLMNEEGESWTIDVKHEAHTGRFLTIRGWRRFCVANGKKPGDLLKFKLV 358
Score = 75 (31.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 79 DGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSRQNQA-TVN 137
+GW +F H + VG VVF+ F V + EIQY + + T N
Sbjct: 68 NGWEDFTIAHDLRVGDIVVFRQEGELVFHVTALGPSCCEIQYGEDTLEEDKIEKLCGTEN 127
Query: 138 SSKSKNGCKMQSKT 151
S K K ++++
Sbjct: 128 VSSKKKSLKREAES 141
>TAIR|locus:2144831 [details] [associations]
symbol:AT5G09780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AB020752 EMBL:AL353994 EMBL:DQ056675
IPI:IPI00528395 PIR:T49920 RefSeq:NP_196540.1 UniGene:At.54791
ProteinModelPortal:Q9LXE1 SMR:Q9LXE1 EnsemblPlants:AT5G09780.1
GeneID:830838 KEGG:ath:AT5G09780 TAIR:At5g09780 eggNOG:NOG289999
HOGENOM:HOG000131629 InParanoid:Q9LXE1 OMA:SKRTERV PhylomeDB:Q9LXE1
ProtClustDB:CLSN2681146 Genevestigator:Q9LXE1 Uniprot:Q9LXE1
Length = 308
Score = 97 (39.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 39/140 (27%), Positives = 68/140 (48%)
Query: 16 KKTNSLFFQVILA--VTIEDKKMKIPQNFVGRFGD-ELSYVATLTNPKGYVVRIGITKKE 72
+K S FF+V+ ++ ED + IP +FV F D ELS G ++ I+K
Sbjct: 14 RKQES-FFKVLKRSDMSSEDTRA-IPYDFVINFSDNELSGDMKFRVQWGNSWKVKISKNP 71
Query: 73 GKIWFDD--GWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTTTFEIQYPSRNMFPPSR 130
+ +F + GW +FV +++G F+ F ++ F V +FN E+ P P SR
Sbjct: 72 -RFYFMEKSGWEKFVIDNALGDHEFLTFTHKGQMSFTVKIFNKDGKEMMQP-----PQSR 125
Query: 131 QNQATVNSSKSKNGCKMQSK 150
+ A+ + K++ K + +
Sbjct: 126 ASFASSSRVKTEQDVKREEE 145
Score = 56 (24.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 32/129 (24%), Positives = 49/129 (37%)
Query: 235 EDMDTYDCESRMTLEEKQEAINVARFLKPEKPS-----FLVFLRASNMQLNCVYVPNSFA 289
E+ TY R ++ E + + +PS F +F+ S + + +P F
Sbjct: 181 EETQTYKRTERTQNSKRTERVVSKERVYAGEPSSSVAGFKIFI--SKSYIKSLAIPKPFG 238
Query: 290 RKYFNGEEC-VTIQDSDGRKL--AVKVKVSCSKCLLTRWGKFFKKTNVKEGDILFFEMIQ 346
Y E+ V I DG K V V + W + K+ V GD F +I
Sbjct: 239 N-YMPKEKTRVKIHHPDGEKTWKVVFVVKERGQIFSGGWKRLCKEYPVVFGDTCKFTLIT 297
Query: 347 MKNILLKVS 355
+LL VS
Sbjct: 298 PLELLLVVS 306
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 359 0.00081 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 611 (65 KB)
Total size of DFA: 232 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.32u 0.17s 33.49t Elapsed: 00:00:02
Total cpu time: 33.32u 0.17s 33.49t Elapsed: 00:00:02
Start: Tue May 21 00:54:49 2013 End: Tue May 21 00:54:51 2013