Query 042544
Match_columns 305
No_of_seqs 356 out of 3257
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 12:19:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.2E-23 4.2E-28 179.0 20.5 182 98-304 68-259 (261)
2 3bus_A REBM, methyltransferase 99.9 5.8E-24 2E-28 182.4 17.4 159 49-219 7-169 (273)
3 2o57_A Putative sarcosine dime 99.9 3.8E-23 1.3E-27 179.6 19.6 164 45-220 17-191 (297)
4 3hem_A Cyclopropane-fatty-acyl 99.9 8.2E-23 2.8E-27 178.0 19.6 168 45-218 14-185 (302)
5 1kpg_A CFA synthase;, cyclopro 99.9 4E-22 1.4E-26 172.3 18.1 160 48-219 9-171 (287)
6 2fk8_A Methoxy mycolic acid sy 99.9 1.6E-21 5.4E-26 171.0 16.0 163 46-220 33-198 (318)
7 3dlc_A Putative S-adenosyl-L-m 99.9 1.4E-21 4.7E-26 161.7 13.3 115 90-216 34-148 (219)
8 3dtn_A Putative methyltransfer 99.9 2.4E-21 8E-26 162.4 13.8 178 98-303 42-227 (234)
9 3fpf_A Mtnas, putative unchara 99.9 2.7E-21 9.4E-26 165.0 14.3 161 40-217 58-223 (298)
10 3dh0_A SAM dependent methyltra 99.9 4.4E-21 1.5E-25 159.0 14.8 164 92-303 29-194 (219)
11 4htf_A S-adenosylmethionine-de 99.9 2.9E-21 1E-25 166.7 13.0 113 92-217 61-174 (285)
12 3ocj_A Putative exported prote 99.9 5.4E-21 1.8E-25 166.7 14.0 186 97-303 115-305 (305)
13 1vl5_A Unknown conserved prote 99.9 1.5E-20 5.2E-25 160.0 16.4 113 92-217 29-141 (260)
14 3hnr_A Probable methyltransfer 99.8 1.4E-20 4.9E-25 156.1 13.6 169 98-303 43-213 (220)
15 3vc1_A Geranyl diphosphate 2-C 99.8 7.5E-21 2.6E-25 166.3 12.4 118 90-219 106-224 (312)
16 3kkz_A Uncharacterized protein 99.8 3.6E-20 1.2E-24 158.4 13.6 109 98-218 44-152 (267)
17 3pfg_A N-methyltransferase; N, 99.8 2E-20 6.8E-25 159.6 11.8 184 99-304 49-251 (263)
18 1xxl_A YCGJ protein; structura 99.8 8.9E-20 3.1E-24 153.4 15.7 114 91-217 12-125 (239)
19 3h2b_A SAM-dependent methyltra 99.8 1.2E-20 4E-25 154.7 9.4 154 101-302 42-195 (203)
20 1nkv_A Hypothetical protein YJ 99.8 4.2E-20 1.4E-24 156.8 13.1 120 89-220 25-144 (256)
21 3f4k_A Putative methyltransfer 99.8 6.9E-20 2.4E-24 155.5 14.3 110 97-218 43-152 (257)
22 3mgg_A Methyltransferase; NYSG 99.8 8.1E-20 2.8E-24 156.8 14.3 168 89-284 26-194 (276)
23 3ujc_A Phosphoethanolamine N-m 99.8 4.5E-20 1.5E-24 157.3 12.4 118 90-219 45-162 (266)
24 4hg2_A Methyltransferase type 99.8 2E-20 7E-25 158.6 9.1 99 100-218 39-137 (257)
25 3l8d_A Methyltransferase; stru 99.8 5E-20 1.7E-24 154.9 11.0 103 99-217 52-154 (242)
26 2xvm_A Tellurite resistance pr 99.8 1.7E-19 6E-24 146.9 13.7 112 94-217 26-137 (199)
27 3e23_A Uncharacterized protein 99.8 1.1E-19 3.6E-24 149.9 12.1 103 97-217 40-142 (211)
28 1pjz_A Thiopurine S-methyltran 99.8 5.1E-20 1.7E-24 151.0 9.6 113 95-217 17-141 (203)
29 3mcz_A O-methyltransferase; ad 99.8 2.1E-19 7.1E-24 159.8 13.6 179 92-304 170-351 (352)
30 3e8s_A Putative SAM dependent 99.8 6.4E-20 2.2E-24 152.5 9.0 172 96-302 48-227 (227)
31 4fsd_A Arsenic methyltransfera 99.8 1.4E-19 4.6E-24 162.7 11.6 109 98-217 81-204 (383)
32 2ex4_A Adrenal gland protein A 99.8 1.2E-19 4E-24 152.8 9.9 158 44-219 27-188 (241)
33 1y8c_A S-adenosylmethionine-de 99.8 2.3E-19 8E-24 151.0 11.3 106 100-217 37-143 (246)
34 1xtp_A LMAJ004091AAA; SGPP, st 99.8 5.7E-19 2E-23 149.5 13.7 151 46-217 48-198 (254)
35 3ege_A Putative methyltransfer 99.8 2.4E-19 8.3E-24 152.7 11.1 110 89-218 23-132 (261)
36 2r3s_A Uncharacterized protein 99.8 1.7E-18 5.6E-23 152.8 16.8 179 91-302 154-335 (335)
37 3bxo_A N,N-dimethyltransferase 99.8 3.5E-19 1.2E-23 149.4 11.6 115 87-219 29-144 (239)
38 3bkx_A SAM-dependent methyltra 99.8 2.3E-18 7.7E-23 147.7 15.8 130 79-219 22-162 (275)
39 3i53_A O-methyltransferase; CO 99.8 2.1E-18 7.1E-23 152.1 15.7 166 96-301 165-331 (332)
40 2yqz_A Hypothetical protein TT 99.8 1.4E-18 4.8E-23 147.8 14.0 105 97-215 36-140 (263)
41 3gu3_A Methyltransferase; alph 99.8 1.2E-18 4E-23 150.3 13.4 109 96-218 18-128 (284)
42 3i9f_A Putative type 11 methyl 99.8 4.4E-19 1.5E-23 141.1 10.0 104 95-219 12-115 (170)
43 3ccf_A Cyclopropane-fatty-acyl 99.8 1.9E-18 6.4E-23 148.6 14.6 105 94-217 51-155 (279)
44 3ou2_A SAM-dependent methyltra 99.8 2.3E-18 8E-23 142.3 14.5 107 97-219 43-149 (218)
45 1x19_A CRTF-related protein; m 99.8 3E-18 1E-22 152.7 15.8 174 90-302 180-359 (359)
46 3ofk_A Nodulation protein S; N 99.8 1.2E-18 4.1E-23 144.0 12.0 117 87-216 38-154 (216)
47 2gb4_A Thiopurine S-methyltran 99.8 7.4E-19 2.5E-23 148.7 10.8 111 97-217 65-192 (252)
48 3jwh_A HEN1; methyltransferase 99.8 6.7E-19 2.3E-23 145.7 10.3 117 91-216 20-141 (217)
49 3lcc_A Putative methyl chlorid 99.8 8.8E-19 3E-23 146.8 10.5 112 96-219 63-174 (235)
50 3jwg_A HEN1, methyltransferase 99.8 7.7E-19 2.6E-23 145.5 9.9 116 91-215 20-140 (219)
51 3gwz_A MMCR; methyltransferase 99.8 1.1E-17 3.7E-22 149.6 18.1 177 90-302 192-369 (369)
52 3dp7_A SAM-dependent methyltra 99.8 4.2E-18 1.5E-22 151.9 15.3 159 99-286 178-340 (363)
53 1ri5_A MRNA capping enzyme; me 99.8 2.7E-18 9.1E-23 148.8 13.5 112 98-218 62-176 (298)
54 4a6d_A Hydroxyindole O-methylt 99.8 7.9E-18 2.7E-22 149.5 16.7 177 91-303 170-347 (353)
55 2a14_A Indolethylamine N-methy 99.8 2.9E-19 1E-23 152.4 7.2 168 97-303 52-261 (263)
56 3g5l_A Putative S-adenosylmeth 99.8 2E-18 6.8E-23 146.3 11.8 111 92-217 36-146 (253)
57 1vlm_A SAM-dependent methyltra 99.8 2.4E-18 8.1E-23 142.7 11.3 93 101-217 48-140 (219)
58 1tw3_A COMT, carminomycin 4-O- 99.8 5.1E-18 1.7E-22 151.2 14.1 180 92-305 175-359 (360)
59 2gs9_A Hypothetical protein TT 99.8 1.9E-18 6.5E-23 142.3 10.4 98 100-218 36-134 (211)
60 1qzz_A RDMB, aclacinomycin-10- 99.8 1.4E-17 4.8E-22 149.1 16.4 176 92-303 174-357 (374)
61 3dli_A Methyltransferase; PSI- 99.8 1.3E-18 4.4E-23 146.3 8.8 101 98-217 39-141 (240)
62 3g5t_A Trans-aconitate 3-methy 99.8 6.5E-18 2.2E-22 146.7 13.5 105 99-215 35-148 (299)
63 2p8j_A S-adenosylmethionine-de 99.8 5.4E-18 1.8E-22 139.3 11.8 111 98-219 21-131 (209)
64 2p7i_A Hypothetical protein; p 99.7 3.1E-18 1.1E-22 144.3 9.9 103 99-219 41-144 (250)
65 2ip2_A Probable phenazine-spec 99.7 1.5E-17 5E-22 146.7 14.6 174 91-301 159-333 (334)
66 3thr_A Glycine N-methyltransfe 99.7 3.8E-18 1.3E-22 147.6 9.6 117 90-218 47-177 (293)
67 3sm3_A SAM-dependent methyltra 99.7 1.1E-17 3.9E-22 139.6 11.8 111 98-217 28-142 (235)
68 3g07_A 7SK snRNA methylphospha 99.7 1.5E-18 5E-23 150.3 6.0 108 100-216 46-220 (292)
69 3bkw_A MLL3908 protein, S-aden 99.7 1.4E-17 4.8E-22 139.9 11.8 110 92-217 35-145 (243)
70 2p35_A Trans-aconitate 2-methy 99.7 1.1E-17 3.8E-22 142.0 11.1 109 92-218 25-134 (259)
71 3m70_A Tellurite resistance pr 99.7 1.9E-17 6.4E-22 142.8 12.7 106 99-217 119-224 (286)
72 3cgg_A SAM-dependent methyltra 99.7 7.1E-17 2.4E-21 130.7 15.4 103 98-216 44-147 (195)
73 2avn_A Ubiquinone/menaquinone 99.7 4E-17 1.4E-21 138.9 14.3 108 90-218 46-154 (260)
74 4e2x_A TCAB9; kijanose, tetron 99.7 5.1E-19 1.7E-23 160.8 1.9 178 81-302 88-267 (416)
75 1ve3_A Hypothetical protein PH 99.7 5.3E-17 1.8E-21 134.9 13.4 108 99-218 37-144 (227)
76 3njr_A Precorrin-6Y methylase; 99.7 1.5E-16 5.2E-21 130.3 14.9 109 91-216 46-154 (204)
77 3mti_A RRNA methylase; SAM-dep 99.7 2.3E-17 7.7E-22 133.0 9.8 108 97-216 19-135 (185)
78 3lst_A CALO1 methyltransferase 99.7 4E-17 1.4E-21 144.8 12.1 172 91-301 175-347 (348)
79 2vdw_A Vaccinia virus capping 99.7 1.8E-17 6.1E-22 143.9 9.6 112 99-218 47-171 (302)
80 3reo_A (ISO)eugenol O-methyltr 99.7 1.5E-16 5.2E-21 142.0 15.6 166 98-302 201-367 (368)
81 3hm2_A Precorrin-6Y C5,15-meth 99.7 7E-17 2.4E-21 129.1 12.0 111 90-216 15-127 (178)
82 3cc8_A Putative methyltransfer 99.7 1.5E-17 5E-22 138.4 8.4 100 99-218 31-132 (230)
83 3iv6_A Putative Zn-dependent a 99.7 4.4E-17 1.5E-21 137.7 11.2 109 91-217 36-149 (261)
84 2i62_A Nicotinamide N-methyltr 99.7 1.6E-17 5.6E-22 141.4 8.6 168 97-304 53-263 (265)
85 1wzn_A SAM-dependent methyltra 99.7 7.9E-17 2.7E-21 136.2 12.7 111 95-218 36-147 (252)
86 2zfu_A Nucleomethylin, cerebra 99.7 4.1E-17 1.4E-21 134.7 10.5 169 43-303 24-192 (215)
87 3e05_A Precorrin-6Y C5,15-meth 99.7 2.6E-16 8.9E-21 128.9 15.2 112 90-216 30-142 (204)
88 3p9n_A Possible methyltransfer 99.7 1E-16 3.5E-21 129.7 12.4 108 99-218 43-155 (189)
89 2aot_A HMT, histamine N-methyl 99.7 1.7E-17 6E-22 143.5 8.4 108 99-217 51-173 (292)
90 1zx0_A Guanidinoacetate N-meth 99.7 1.4E-17 4.9E-22 139.6 7.5 110 98-216 58-170 (236)
91 3g2m_A PCZA361.24; SAM-depende 99.7 5.1E-17 1.8E-21 141.0 10.7 116 92-219 75-193 (299)
92 3ggd_A SAM-dependent methyltra 99.7 7.8E-17 2.7E-21 135.7 11.0 107 97-217 53-164 (245)
93 3lbf_A Protein-L-isoaspartate 99.7 1.4E-16 4.9E-21 130.9 12.3 110 90-218 67-176 (210)
94 3d2l_A SAM-dependent methyltra 99.7 2.7E-16 9.2E-21 132.0 14.1 106 99-217 32-138 (243)
95 3p9c_A Caffeic acid O-methyltr 99.7 3.5E-16 1.2E-20 139.5 15.4 171 92-301 192-364 (364)
96 3orh_A Guanidinoacetate N-meth 99.7 2.5E-17 8.4E-22 138.2 7.1 104 99-215 59-169 (236)
97 1fbn_A MJ fibrillarin homologu 99.7 9.5E-17 3.2E-21 134.1 10.4 104 95-215 69-177 (230)
98 2fyt_A Protein arginine N-meth 99.7 1.9E-16 6.7E-21 139.7 12.9 112 90-213 54-168 (340)
99 1dus_A MJ0882; hypothetical pr 99.7 3.6E-16 1.2E-20 126.4 13.3 114 90-216 42-157 (194)
100 3q7e_A Protein arginine N-meth 99.7 1.5E-16 5E-21 141.0 11.4 105 98-214 64-171 (349)
101 2g72_A Phenylethanolamine N-me 99.7 3.8E-17 1.3E-21 141.1 6.9 107 99-216 70-215 (289)
102 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.5E-16 5.1E-21 131.7 10.0 113 100-216 34-150 (218)
103 3uwp_A Histone-lysine N-methyl 99.7 9.7E-17 3.3E-21 141.9 9.3 123 86-220 159-292 (438)
104 3htx_A HEN1; HEN1, small RNA m 99.7 2.5E-16 8.6E-21 149.1 12.5 117 91-218 712-836 (950)
105 4df3_A Fibrillarin-like rRNA/T 99.7 2E-16 6.9E-21 131.0 10.3 106 95-216 72-182 (233)
106 3eey_A Putative rRNA methylase 99.7 2.4E-16 8.3E-21 128.2 10.4 112 97-216 19-139 (197)
107 2fca_A TRNA (guanine-N(7)-)-me 99.7 4.9E-16 1.7E-20 128.2 12.3 114 99-216 37-153 (213)
108 1yzh_A TRNA (guanine-N(7)-)-me 99.7 6.4E-16 2.2E-20 127.5 12.9 114 99-216 40-156 (214)
109 3m33_A Uncharacterized protein 99.7 4.5E-16 1.5E-20 129.6 11.9 91 99-213 47-139 (226)
110 2kw5_A SLR1183 protein; struct 99.7 1.9E-16 6.6E-21 129.3 9.5 106 98-218 28-133 (202)
111 2pxx_A Uncharacterized protein 99.7 2.7E-16 9.1E-21 129.5 10.3 107 99-217 41-160 (215)
112 3fzg_A 16S rRNA methylase; met 99.7 7.4E-17 2.5E-21 127.9 6.1 104 99-216 48-152 (200)
113 3giw_A Protein of unknown func 99.7 4.6E-16 1.6E-20 131.3 11.2 108 100-217 78-201 (277)
114 2qe6_A Uncharacterized protein 99.7 1.3E-15 4.5E-20 130.4 14.1 106 100-217 77-197 (274)
115 2y1w_A Histone-arginine methyl 99.7 3.8E-16 1.3E-20 138.4 10.8 117 89-216 39-155 (348)
116 3r0q_C Probable protein argini 99.7 5.9E-16 2E-20 138.5 11.8 118 89-216 52-169 (376)
117 3lpm_A Putative methyltransfer 99.7 3.9E-16 1.3E-20 132.7 10.1 125 92-216 40-176 (259)
118 1fp1_D Isoliquiritigenin 2'-O- 99.6 1.3E-15 4.5E-20 136.2 13.9 172 91-301 199-372 (372)
119 1xdz_A Methyltransferase GIDB; 99.6 9.9E-16 3.4E-20 128.7 12.0 103 98-216 68-174 (240)
120 1g6q_1 HnRNP arginine N-methyl 99.6 8.9E-16 3E-20 134.9 12.0 109 97-214 35-143 (328)
121 3bgv_A MRNA CAP guanine-N7 met 99.6 4.4E-16 1.5E-20 136.0 9.6 112 99-218 33-157 (313)
122 3mb5_A SAM-dependent methyltra 99.6 2.3E-15 7.7E-20 127.5 13.7 109 91-216 84-194 (255)
123 2b3t_A Protein methyltransfera 99.6 2.2E-15 7.5E-20 129.3 13.3 123 90-215 100-237 (276)
124 1vbf_A 231AA long hypothetical 99.6 1.4E-15 4.9E-20 126.8 11.3 107 90-217 60-166 (231)
125 1yb2_A Hypothetical protein TA 99.6 1.8E-15 6.2E-20 129.7 12.1 108 91-216 101-211 (275)
126 3id6_C Fibrillarin-like rRNA/T 99.6 5E-15 1.7E-19 122.9 14.3 154 96-302 72-231 (232)
127 3dr5_A Putative O-methyltransf 99.6 6.3E-16 2.1E-20 128.2 8.7 116 87-216 43-163 (221)
128 2pwy_A TRNA (adenine-N(1)-)-me 99.6 4.4E-15 1.5E-19 125.8 14.1 109 91-216 87-198 (258)
129 3gdh_A Trimethylguanosine synt 99.6 3.2E-17 1.1E-21 137.8 0.7 103 99-214 77-179 (241)
130 3evz_A Methyltransferase; NYSG 99.6 2.9E-15 9.9E-20 124.8 12.5 119 96-216 51-179 (230)
131 2yxd_A Probable cobalt-precorr 99.6 3.2E-15 1.1E-19 119.7 12.3 107 90-216 25-131 (183)
132 1l3i_A Precorrin-6Y methyltran 99.6 1.1E-15 3.6E-20 123.4 9.5 111 90-216 23-134 (192)
133 2ift_A Putative methylase HI07 99.6 4E-16 1.4E-20 127.5 7.0 108 100-219 53-166 (201)
134 1fp2_A Isoflavone O-methyltran 99.6 1.4E-15 4.7E-20 135.1 10.9 163 98-301 186-352 (352)
135 2esr_A Methyltransferase; stru 99.6 2.7E-16 9.3E-21 125.7 5.8 116 91-218 21-140 (177)
136 3g89_A Ribosomal RNA small sub 99.6 7.6E-15 2.6E-19 123.8 14.9 103 98-216 78-184 (249)
137 3ntv_A MW1564 protein; rossman 99.6 3.4E-16 1.2E-20 130.9 6.5 107 96-216 67-176 (232)
138 1nt2_A Fibrillarin-like PRE-rR 99.6 2.5E-15 8.7E-20 123.5 11.6 104 96-216 53-161 (210)
139 1i9g_A Hypothetical protein RV 99.6 4.7E-15 1.6E-19 127.3 13.7 111 90-216 89-203 (280)
140 4dcm_A Ribosomal RNA large sub 99.6 2.6E-15 8.9E-20 134.0 12.4 117 90-216 212-334 (375)
141 3grz_A L11 mtase, ribosomal pr 99.6 6.6E-16 2.3E-20 126.5 7.9 102 98-216 58-159 (205)
142 3ckk_A TRNA (guanine-N(7)-)-me 99.6 1.3E-15 4.4E-20 127.4 9.6 114 99-216 45-168 (235)
143 1dl5_A Protein-L-isoaspartate 99.6 2E-15 6.7E-20 132.1 11.1 111 89-217 64-176 (317)
144 2yxe_A Protein-L-isoaspartate 99.6 3.2E-15 1.1E-19 123.2 11.5 110 90-217 67-178 (215)
145 2fhp_A Methylase, putative; al 99.6 7.2E-16 2.5E-20 124.2 7.3 110 97-218 41-156 (187)
146 3u81_A Catechol O-methyltransf 99.6 4.1E-16 1.4E-20 129.4 5.9 106 99-216 57-170 (221)
147 3mq2_A 16S rRNA methyltransfer 99.6 8.7E-16 3E-20 127.0 7.7 108 96-216 23-140 (218)
148 3b3j_A Histone-arginine methyl 99.6 1.4E-15 4.6E-20 139.8 9.7 117 88-215 146-262 (480)
149 1jsx_A Glucose-inhibited divis 99.6 3.1E-15 1.1E-19 122.5 10.9 100 100-216 65-165 (207)
150 2fpo_A Methylase YHHF; structu 99.6 1.4E-15 4.7E-20 124.4 8.6 106 100-218 54-162 (202)
151 3dmg_A Probable ribosomal RNA 99.6 4.5E-15 1.5E-19 132.5 12.7 106 99-216 232-340 (381)
152 2ozv_A Hypothetical protein AT 99.6 1.9E-15 6.5E-20 128.5 9.6 125 92-216 28-170 (260)
153 4azs_A Methyltransferase WBDD; 99.6 2.4E-15 8.2E-20 141.5 11.2 109 100-219 66-176 (569)
154 3tfw_A Putative O-methyltransf 99.6 1.2E-15 4.1E-20 128.8 8.0 105 98-216 61-170 (248)
155 2yvl_A TRMI protein, hypotheti 99.6 1.8E-14 6.1E-19 121.3 15.2 109 91-216 82-190 (248)
156 1u2z_A Histone-lysine N-methyl 99.6 4.8E-15 1.6E-19 133.5 12.1 118 90-219 232-362 (433)
157 2frn_A Hypothetical protein PH 99.6 5.3E-15 1.8E-19 126.9 11.9 104 98-217 123-226 (278)
158 1i1n_A Protein-L-isoaspartate 99.6 6E-15 2.1E-19 122.6 11.4 103 98-217 75-183 (226)
159 2h00_A Methyltransferase 10 do 99.6 1.3E-14 4.4E-19 122.9 13.3 116 100-215 65-191 (254)
160 1af7_A Chemotaxis receptor met 99.6 1.5E-15 5.1E-20 129.4 7.4 107 100-215 105-251 (274)
161 1o54_A SAM-dependent O-methylt 99.6 1.2E-14 4.3E-19 124.6 12.9 110 90-216 102-213 (277)
162 1o9g_A RRNA methyltransferase; 99.6 3.1E-15 1.1E-19 126.4 8.6 120 91-218 42-216 (250)
163 1jg1_A PIMT;, protein-L-isoasp 99.6 7.8E-15 2.7E-19 122.8 10.8 109 90-217 81-190 (235)
164 1p91_A Ribosomal RNA large sub 99.6 2.4E-14 8.2E-19 122.1 13.9 97 99-219 84-181 (269)
165 2pbf_A Protein-L-isoaspartate 99.6 7.4E-15 2.5E-19 122.1 10.4 104 97-217 77-194 (227)
166 2ipx_A RRNA 2'-O-methyltransfe 99.6 1E-14 3.5E-19 121.8 11.0 106 95-216 72-182 (233)
167 1zg3_A Isoflavanone 4'-O-methy 99.6 6.7E-15 2.3E-19 130.9 10.3 164 98-301 191-358 (358)
168 4hc4_A Protein arginine N-meth 99.6 8.3E-15 2.8E-19 129.9 10.8 106 99-214 82-187 (376)
169 3q87_B N6 adenine specific DNA 99.6 7.9E-15 2.7E-19 116.5 9.6 102 99-216 22-123 (170)
170 2gpy_A O-methyltransferase; st 99.6 2.5E-15 8.6E-20 125.6 6.4 107 96-216 50-160 (233)
171 3duw_A OMT, O-methyltransferas 99.6 2.8E-15 9.7E-20 124.3 6.5 105 98-216 56-167 (223)
172 2b25_A Hypothetical protein; s 99.6 1.5E-14 5.1E-19 127.6 11.1 112 90-217 95-220 (336)
173 3tr6_A O-methyltransferase; ce 99.6 2.2E-15 7.6E-20 125.1 5.4 104 99-216 63-174 (225)
174 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.4E-14 4.9E-19 122.0 10.4 112 99-216 48-173 (246)
175 2ld4_A Anamorsin; methyltransf 99.6 2.6E-15 8.9E-20 119.9 5.5 92 95-217 7-102 (176)
176 3bzb_A Uncharacterized protein 99.5 2.9E-14 1E-18 122.5 12.0 116 89-215 68-204 (281)
177 3r3h_A O-methyltransferase, SA 99.5 7.2E-16 2.5E-20 129.6 1.8 106 99-218 59-172 (242)
178 3tma_A Methyltransferase; thum 99.5 3.7E-14 1.3E-18 125.9 12.7 123 89-217 192-318 (354)
179 1ws6_A Methyltransferase; stru 99.5 2.9E-15 9.8E-20 118.8 4.7 103 100-218 41-149 (171)
180 1ixk_A Methyltransferase; open 99.5 2.5E-14 8.6E-19 124.8 10.8 125 93-218 111-248 (315)
181 1nv8_A HEMK protein; class I a 99.5 3.9E-14 1.3E-18 121.8 11.6 113 99-216 122-249 (284)
182 1r18_A Protein-L-isoaspartate( 99.5 1.1E-14 3.9E-19 121.1 8.0 102 97-216 81-194 (227)
183 3c3p_A Methyltransferase; NP_9 99.5 4.1E-15 1.4E-19 122.3 5.2 102 100-216 56-160 (210)
184 3lec_A NADB-rossmann superfami 99.5 9.1E-15 3.1E-19 120.6 6.8 122 98-219 19-149 (230)
185 1sui_A Caffeoyl-COA O-methyltr 99.5 6.6E-15 2.3E-19 124.1 6.2 104 99-216 78-190 (247)
186 3p2e_A 16S rRNA methylase; met 99.5 2.9E-15 1E-19 124.5 3.9 111 99-216 23-139 (225)
187 2hnk_A SAM-dependent O-methylt 99.5 9.3E-15 3.2E-19 122.6 7.0 106 97-216 57-181 (239)
188 2pjd_A Ribosomal RNA small sub 99.5 1.4E-14 4.7E-19 128.1 8.1 115 90-217 186-304 (343)
189 2nxc_A L11 mtase, ribosomal pr 99.5 1.6E-14 5.6E-19 122.2 8.1 101 98-216 118-218 (254)
190 1g8a_A Fibrillarin-like PRE-rR 99.5 6.2E-14 2.1E-18 116.5 11.4 104 96-215 69-177 (227)
191 3gnl_A Uncharacterized protein 99.5 1.2E-14 4.2E-19 120.8 6.8 120 98-217 19-147 (244)
192 3a27_A TYW2, uncharacterized p 99.5 1.1E-13 3.7E-18 118.4 12.7 105 96-217 115-220 (272)
193 1ej0_A FTSJ; methyltransferase 99.5 3.4E-14 1.2E-18 112.9 8.7 108 97-216 19-136 (180)
194 4dzr_A Protein-(glutamine-N5) 99.5 1E-15 3.5E-20 125.8 -0.2 124 90-216 19-164 (215)
195 1zq9_A Probable dimethyladenos 99.5 5E-14 1.7E-18 121.2 9.9 84 90-176 18-101 (285)
196 3ajd_A Putative methyltransfer 99.5 5.7E-14 1.9E-18 120.2 9.4 124 95-219 78-214 (274)
197 3kr9_A SAM-dependent methyltra 99.5 2.2E-14 7.5E-19 118.1 6.5 119 98-217 13-141 (225)
198 2bm8_A Cephalosporin hydroxyla 99.5 1.3E-14 4.4E-19 121.5 4.7 97 100-216 81-187 (236)
199 3cbg_A O-methyltransferase; cy 99.5 2.5E-14 8.6E-19 119.5 6.2 104 99-216 71-182 (232)
200 3c3y_A Pfomt, O-methyltransfer 99.5 2.7E-14 9.1E-19 119.7 6.3 104 99-216 69-181 (237)
201 2igt_A SAM dependent methyltra 99.5 3.3E-14 1.1E-18 124.7 7.1 107 98-216 151-272 (332)
202 2avd_A Catechol-O-methyltransf 99.5 3.4E-14 1.2E-18 118.2 5.6 105 98-216 67-179 (229)
203 2yxl_A PH0851 protein, 450AA l 99.5 3.6E-13 1.2E-17 123.2 12.6 127 92-219 251-392 (450)
204 3hp7_A Hemolysin, putative; st 99.5 1.3E-13 4.4E-18 117.9 8.9 102 95-216 79-185 (291)
205 3bwc_A Spermidine synthase; SA 99.5 8.5E-14 2.9E-18 120.9 7.7 111 99-216 94-210 (304)
206 3adn_A Spermidine synthase; am 99.5 1.3E-13 4.6E-18 118.8 8.6 111 99-216 82-198 (294)
207 1ne2_A Hypothetical protein TA 99.5 7.1E-13 2.4E-17 107.9 12.2 92 97-206 48-139 (200)
208 2wa2_A Non-structural protein 99.4 5.2E-14 1.8E-18 120.2 5.1 111 96-216 78-193 (276)
209 3gjy_A Spermidine synthase; AP 99.4 1.5E-13 5.1E-18 118.8 7.9 108 102-217 91-201 (317)
210 2plw_A Ribosomal RNA methyltra 99.4 3.5E-13 1.2E-17 109.7 9.8 102 98-216 20-154 (201)
211 2oxt_A Nucleoside-2'-O-methylt 99.4 6.9E-14 2.4E-18 118.8 5.5 112 95-216 69-185 (265)
212 3sso_A Methyltransferase; macr 99.4 2.9E-14 1E-18 125.9 3.2 96 100-217 216-325 (419)
213 3tm4_A TRNA (guanine N2-)-meth 99.4 4E-13 1.4E-17 119.9 10.5 88 91-179 209-297 (373)
214 1xj5_A Spermidine synthase 1; 99.4 2.8E-13 9.7E-18 118.7 9.0 112 97-215 117-234 (334)
215 3k6r_A Putative transferase PH 99.4 7.4E-13 2.5E-17 112.7 11.2 103 98-216 123-225 (278)
216 1wy7_A Hypothetical protein PH 99.4 2.8E-12 9.7E-17 104.8 14.3 96 97-206 46-141 (207)
217 2frx_A Hypothetical protein YE 99.4 6E-13 2.1E-17 122.1 11.2 123 94-219 109-249 (479)
218 3frh_A 16S rRNA methylase; met 99.4 5.9E-13 2E-17 109.4 9.8 105 96-215 101-205 (253)
219 2o07_A Spermidine synthase; st 99.4 2.7E-13 9.1E-18 117.6 7.6 112 98-216 93-209 (304)
220 3m6w_A RRNA methylase; rRNA me 99.4 2.3E-13 7.9E-18 123.8 7.4 125 93-219 94-232 (464)
221 1iy9_A Spermidine synthase; ro 99.4 4E-13 1.4E-17 114.9 8.3 110 100-216 75-189 (275)
222 1mjf_A Spermidine synthase; sp 99.4 3.6E-13 1.2E-17 115.6 7.0 109 99-216 74-193 (281)
223 2pt6_A Spermidine synthase; tr 99.4 4.7E-13 1.6E-17 116.9 7.7 111 99-216 115-230 (321)
224 1sqg_A SUN protein, FMU protei 99.4 9.9E-13 3.4E-17 119.6 9.7 127 91-219 237-377 (429)
225 1uir_A Polyamine aminopropyltr 99.4 3.7E-13 1.3E-17 117.3 6.6 111 99-216 76-195 (314)
226 2qm3_A Predicted methyltransfe 99.4 1.5E-12 5E-17 116.4 10.6 104 98-215 170-277 (373)
227 1uwv_A 23S rRNA (uracil-5-)-me 99.4 4.4E-12 1.5E-16 115.4 13.6 92 82-175 268-363 (433)
228 1inl_A Spermidine synthase; be 99.4 7.7E-13 2.6E-17 114.3 7.9 112 99-216 89-205 (296)
229 2b2c_A Spermidine synthase; be 99.4 3.3E-13 1.1E-17 117.4 5.6 111 99-216 107-222 (314)
230 3dou_A Ribosomal RNA large sub 99.4 2E-12 6.9E-17 104.5 9.7 104 98-216 23-139 (191)
231 3opn_A Putative hemolysin; str 99.4 2.4E-13 8.2E-18 113.3 4.2 99 99-216 36-137 (232)
232 3m4x_A NOL1/NOP2/SUN family pr 99.4 8.6E-13 3E-17 119.8 7.8 123 93-219 98-237 (456)
233 2h1r_A Dimethyladenosine trans 99.4 3.1E-12 1.1E-16 110.7 10.9 84 90-177 32-115 (299)
234 2i7c_A Spermidine synthase; tr 99.4 8.6E-13 2.9E-17 113.3 7.3 112 98-216 76-192 (283)
235 2nyu_A Putative ribosomal RNA 99.4 2.6E-12 8.9E-17 104.0 9.7 103 97-216 19-145 (196)
236 2b78_A Hypothetical protein SM 99.3 6.3E-13 2.1E-17 119.1 6.0 111 99-216 211-331 (385)
237 2yx1_A Hypothetical protein MJ 99.3 3.5E-12 1.2E-16 112.2 10.7 98 99-216 194-291 (336)
238 1qam_A ERMC' methyltransferase 99.3 1.7E-12 5.9E-17 109.1 8.0 78 89-170 19-97 (244)
239 2f8l_A Hypothetical protein LM 99.3 1.3E-11 4.4E-16 109.0 14.1 117 97-216 127-256 (344)
240 3lcv_B Sisomicin-gentamicin re 99.3 1.3E-12 4.6E-17 108.3 6.9 105 99-216 131-236 (281)
241 2jjq_A Uncharacterized RNA met 99.3 1.5E-11 5.3E-16 111.2 14.3 100 98-216 288-387 (425)
242 3c0k_A UPF0064 protein YCCW; P 99.3 2.2E-12 7.7E-17 116.1 8.5 115 99-216 219-339 (396)
243 3v97_A Ribosomal RNA large sub 99.3 2.3E-12 7.8E-17 123.6 8.9 110 100-216 539-657 (703)
244 3gru_A Dimethyladenosine trans 99.3 6.7E-12 2.3E-16 107.8 10.7 85 89-177 39-123 (295)
245 1yub_A Ermam, rRNA methyltrans 99.3 5.4E-14 1.8E-18 118.4 -3.0 120 91-216 20-145 (245)
246 2as0_A Hypothetical protein PH 99.3 1.8E-12 6.1E-17 116.8 6.5 117 99-217 216-336 (396)
247 3k0b_A Predicted N6-adenine-sp 99.3 3.8E-11 1.3E-15 107.5 13.9 120 89-217 190-351 (393)
248 2cmg_A Spermidine synthase; tr 99.3 2E-12 6.9E-17 109.6 5.1 98 99-216 71-171 (262)
249 4dmg_A Putative uncharacterize 99.3 4.7E-12 1.6E-16 113.4 7.3 113 99-216 213-326 (393)
250 1wxx_A TT1595, hypothetical pr 99.3 1.3E-12 4.4E-17 117.1 3.6 114 100-217 209-326 (382)
251 3ldg_A Putative uncharacterize 99.3 1.1E-10 3.7E-15 104.2 15.1 121 88-217 182-344 (384)
252 2p41_A Type II methyltransfera 99.3 1.5E-12 5.1E-17 112.8 2.8 106 96-216 78-191 (305)
253 3bt7_A TRNA (uracil-5-)-methyl 99.2 4.2E-11 1.4E-15 106.7 12.0 115 83-217 197-327 (369)
254 3tqs_A Ribosomal RNA small sub 99.2 3.4E-11 1.2E-15 101.4 10.7 80 90-174 19-102 (255)
255 2okc_A Type I restriction enzy 99.2 3E-11 1E-15 110.4 11.1 126 90-216 161-307 (445)
256 3ldu_A Putative methylase; str 99.2 7.9E-11 2.7E-15 105.3 13.3 119 89-216 184-344 (385)
257 2b9e_A NOL1/NOP2/SUN domain fa 99.2 1.4E-10 4.8E-15 100.5 12.5 80 94-174 96-180 (309)
258 3fut_A Dimethyladenosine trans 99.2 5E-11 1.7E-15 101.2 9.0 81 90-176 37-118 (271)
259 1m6y_A S-adenosyl-methyltransf 99.2 5.6E-11 1.9E-15 102.5 7.7 81 94-176 20-106 (301)
260 2r6z_A UPF0341 protein in RSP 99.1 1.4E-11 4.8E-16 104.1 3.2 88 92-180 75-173 (258)
261 2ih2_A Modification methylase 99.1 8.6E-11 3E-15 106.5 8.5 116 90-216 29-164 (421)
262 3ftd_A Dimethyladenosine trans 99.1 2.8E-10 9.7E-15 95.6 8.5 73 89-166 20-92 (249)
263 3uzu_A Ribosomal RNA small sub 99.1 4.9E-10 1.7E-14 95.6 9.1 71 90-166 32-106 (279)
264 3v97_A Ribosomal RNA large sub 99.0 3.4E-09 1.2E-13 101.7 15.0 123 89-217 179-348 (703)
265 2xyq_A Putative 2'-O-methyl tr 99.0 2.6E-10 9E-15 97.5 6.5 99 96-216 59-171 (290)
266 2qfm_A Spermine synthase; sper 99.0 2E-10 6.9E-15 100.4 5.8 111 100-216 188-314 (364)
267 3ll7_A Putative methyltransfer 99.0 6.5E-10 2.2E-14 99.3 8.7 75 99-175 92-170 (410)
268 2oyr_A UPF0341 protein YHIQ; a 99.0 4.3E-10 1.5E-14 94.6 7.1 90 90-180 76-176 (258)
269 2dul_A N(2),N(2)-dimethylguano 99.0 2.8E-10 9.7E-15 101.3 6.3 101 100-216 47-164 (378)
270 3axs_A Probable N(2),N(2)-dime 99.0 3.7E-10 1.3E-14 100.6 6.9 103 99-216 51-158 (392)
271 2ar0_A M.ecoki, type I restric 99.0 1.3E-09 4.4E-14 101.6 9.4 126 90-216 159-312 (541)
272 1qyr_A KSGA, high level kasuga 99.0 5E-10 1.7E-14 94.2 5.8 81 90-176 11-98 (252)
273 3khk_A Type I restriction-modi 98.9 2.6E-09 8.7E-14 99.5 8.8 126 90-216 235-395 (544)
274 3cvo_A Methyltransferase-like 98.9 1.3E-08 4.4E-13 82.1 10.8 97 100-214 30-152 (202)
275 4gqb_A Protein arginine N-meth 98.9 6.8E-09 2.3E-13 97.4 9.4 102 100-212 357-463 (637)
276 3lkd_A Type I restriction-modi 98.8 2.5E-08 8.5E-13 92.6 11.8 119 98-216 219-358 (542)
277 3evf_A RNA-directed RNA polyme 98.8 2E-08 6.7E-13 83.9 8.3 114 96-217 70-185 (277)
278 3o4f_A Spermidine synthase; am 98.7 5.2E-08 1.8E-12 82.9 10.1 111 99-216 82-198 (294)
279 4fzv_A Putative methyltransfer 98.7 5.5E-08 1.9E-12 85.6 8.4 127 94-220 142-288 (359)
280 3ua3_A Protein arginine N-meth 98.7 1.6E-08 5.5E-13 94.8 5.1 103 101-213 410-531 (745)
281 1wg8_A Predicted S-adenosylmet 98.7 7.4E-08 2.5E-12 81.0 8.6 78 92-175 14-96 (285)
282 3gcz_A Polyprotein; flavivirus 98.6 2.6E-08 9.1E-13 83.3 5.0 115 95-217 85-202 (282)
283 2efj_A 3,7-dimethylxanthine me 98.6 1.8E-07 6.2E-12 82.8 9.0 116 101-219 53-228 (384)
284 3b5i_A S-adenosyl-L-methionine 98.5 3.7E-07 1.3E-11 80.7 10.0 117 101-217 53-226 (374)
285 4auk_A Ribosomal RNA large sub 98.5 6.1E-07 2.1E-11 78.4 9.6 88 98-209 209-296 (375)
286 2k4m_A TR8_protein, UPF0146 pr 98.5 2.1E-07 7.2E-12 70.0 5.7 72 86-176 23-97 (153)
287 3s1s_A Restriction endonucleas 98.4 1.8E-06 6.3E-11 82.3 12.7 118 99-216 320-465 (878)
288 2qy6_A UPF0209 protein YFCK; s 98.4 1.3E-07 4.4E-12 79.5 3.7 106 100-214 60-211 (257)
289 2wk1_A NOVP; transferase, O-me 98.4 4.4E-07 1.5E-11 77.1 6.8 104 100-216 106-244 (282)
290 1m6e_X S-adenosyl-L-methionnin 98.3 5.8E-07 2E-11 78.9 5.0 119 99-217 50-210 (359)
291 3lkz_A Non-structural protein 98.3 5.7E-06 2E-10 69.3 10.1 113 95-216 89-204 (321)
292 3ufb_A Type I restriction-modi 98.2 1.2E-05 4.2E-10 74.6 12.3 127 89-216 206-362 (530)
293 2zig_A TTHA0409, putative modi 98.2 8.2E-06 2.8E-10 70.2 9.6 47 99-146 234-280 (297)
294 3c6k_A Spermine synthase; sper 98.1 2E-06 6.9E-11 75.5 5.5 111 99-216 204-331 (381)
295 3eld_A Methyltransferase; flav 98.1 1.6E-06 5.5E-11 73.0 3.9 113 98-218 79-193 (300)
296 2px2_A Genome polyprotein [con 98.0 3.4E-05 1.2E-09 63.5 9.7 106 97-216 70-183 (269)
297 3tka_A Ribosomal RNA small sub 97.9 1.2E-05 4.2E-10 69.1 6.3 80 92-176 49-136 (347)
298 3p8z_A Mtase, non-structural p 97.8 4.3E-05 1.5E-09 62.0 7.1 112 95-216 73-186 (267)
299 1g60_A Adenine-specific methyl 97.6 0.00022 7.7E-09 59.9 8.2 48 99-147 211-258 (260)
300 1i4w_A Mitochondrial replicati 97.4 0.00061 2.1E-08 59.6 9.4 59 100-162 58-117 (353)
301 2vz8_A Fatty acid synthase; tr 97.4 4.5E-05 1.5E-09 82.6 2.4 103 99-216 1239-1348(2512)
302 3r24_A NSP16, 2'-O-methyl tran 97.2 0.00033 1.1E-08 58.8 4.5 105 95-217 104-218 (344)
303 1rjd_A PPM1P, carboxy methyl t 97.1 0.0021 7.2E-08 55.9 9.3 108 99-217 96-233 (334)
304 2py6_A Methyltransferase FKBM; 96.7 0.0052 1.8E-07 55.0 8.4 64 97-160 223-292 (409)
305 2dph_A Formaldehyde dismutase; 96.6 0.0068 2.3E-07 54.0 8.6 102 94-215 179-298 (398)
306 2uyo_A Hypothetical protein ML 96.4 0.03 1E-06 48.1 11.1 104 102-216 104-218 (310)
307 1f8f_A Benzyl alcohol dehydrog 96.3 0.0013 4.6E-08 58.0 2.3 99 94-216 184-289 (371)
308 3two_A Mannitol dehydrogenase; 96.2 0.012 4.1E-07 51.4 7.6 94 95-216 171-265 (348)
309 1kol_A Formaldehyde dehydrogen 96.1 0.03 1E-06 49.8 9.7 103 95-216 180-300 (398)
310 4ej6_A Putative zinc-binding d 96.0 0.0058 2E-07 53.9 4.5 99 94-216 176-284 (370)
311 3uog_A Alcohol dehydrogenase; 95.9 0.023 7.7E-07 49.9 7.8 97 95-216 184-287 (363)
312 3fpc_A NADP-dependent alcohol 95.8 0.026 8.9E-07 49.3 8.1 99 94-216 160-266 (352)
313 3g7u_A Cytosine-specific methy 95.8 0.028 9.6E-07 49.6 8.3 68 102-176 3-79 (376)
314 1uuf_A YAHK, zinc-type alcohol 95.8 0.0074 2.5E-07 53.2 4.4 96 95-215 189-287 (369)
315 1boo_A Protein (N-4 cytosine-s 95.7 0.022 7.4E-07 49.2 7.1 49 98-147 250-298 (323)
316 2oo3_A Protein involved in cat 95.7 0.0059 2E-07 51.3 3.1 74 101-178 92-169 (283)
317 1pqw_A Polyketide synthase; ro 95.7 0.019 6.6E-07 45.5 6.1 94 95-215 33-136 (198)
318 3tos_A CALS11; methyltransfera 95.6 0.063 2.1E-06 44.6 9.0 102 102-216 71-217 (257)
319 1eg2_A Modification methylase 95.6 0.029 9.8E-07 48.4 7.1 47 99-146 241-290 (319)
320 1g55_A DNA cytosine methyltran 95.5 0.015 5.1E-07 50.7 5.0 68 102-176 3-76 (343)
321 3goh_A Alcohol dehydrogenase, 95.4 0.012 4.2E-07 50.5 4.2 92 94-215 136-228 (315)
322 1e3j_A NADP(H)-dependent ketos 95.3 0.015 5.1E-07 50.8 4.5 99 94-216 162-271 (352)
323 3gms_A Putative NADPH:quinone 95.1 0.027 9.3E-07 48.9 5.7 98 94-216 138-243 (340)
324 1zkd_A DUF185; NESG, RPR58, st 95.0 0.26 8.8E-06 43.4 11.6 49 95-143 75-131 (387)
325 3qwb_A Probable quinone oxidor 95.0 0.068 2.3E-06 46.2 7.8 96 96-216 144-247 (334)
326 3m6i_A L-arabinitol 4-dehydrog 94.9 0.088 3E-06 46.0 8.4 101 94-216 173-283 (363)
327 2c7p_A Modification methylase 94.9 0.055 1.9E-06 46.8 6.9 68 101-176 11-79 (327)
328 3jyn_A Quinone oxidoreductase; 94.9 0.054 1.8E-06 46.7 6.8 97 95-216 135-239 (325)
329 1v3u_A Leukotriene B4 12- hydr 94.8 0.038 1.3E-06 47.7 5.6 95 94-215 139-243 (333)
330 1rjw_A ADH-HT, alcohol dehydro 94.7 0.1 3.5E-06 45.2 8.3 95 95-215 159-260 (339)
331 4eye_A Probable oxidoreductase 94.7 0.051 1.8E-06 47.2 6.2 97 94-216 153-257 (342)
332 2h6e_A ADH-4, D-arabinose 1-de 94.7 0.012 4.2E-07 51.2 2.2 93 97-215 168-268 (344)
333 4b7c_A Probable oxidoreductase 94.5 0.044 1.5E-06 47.4 5.4 98 94-215 143-247 (336)
334 2eih_A Alcohol dehydrogenase; 94.5 0.15 5E-06 44.3 8.7 94 96-216 162-265 (343)
335 2jhf_A Alcohol dehydrogenase E 94.5 0.015 5.2E-07 51.2 2.3 97 95-215 186-292 (374)
336 3uko_A Alcohol dehydrogenase c 94.5 0.0088 3E-07 52.9 0.8 99 94-216 187-295 (378)
337 2j3h_A NADP-dependent oxidored 94.4 0.06 2E-06 46.7 6.0 96 94-215 149-254 (345)
338 2fzw_A Alcohol dehydrogenase c 94.4 0.015 5.1E-07 51.2 2.1 99 94-216 184-292 (373)
339 2c0c_A Zinc binding alcohol de 94.3 0.14 4.9E-06 44.7 8.2 97 95-216 158-261 (362)
340 3ip1_A Alcohol dehydrogenase, 93.9 0.31 1E-05 43.3 9.7 97 97-216 210-318 (404)
341 1yb5_A Quinone oxidoreductase; 93.9 0.12 4.1E-06 45.1 6.9 95 95-216 165-269 (351)
342 2d8a_A PH0655, probable L-thre 93.8 0.15 5.1E-06 44.3 7.2 96 94-216 162-267 (348)
343 2j8z_A Quinone oxidoreductase; 93.7 0.17 5.9E-06 44.0 7.5 95 95-216 157-261 (354)
344 2b5w_A Glucose dehydrogenase; 93.6 0.077 2.6E-06 46.3 5.1 94 96-216 162-273 (357)
345 1qor_A Quinone oxidoreductase; 93.5 0.17 5.8E-06 43.5 7.1 95 95-216 135-239 (327)
346 3vyw_A MNMC2; tRNA wobble urid 93.4 0.078 2.7E-06 45.2 4.6 107 100-214 96-224 (308)
347 3nx4_A Putative oxidoreductase 93.4 0.042 1.4E-06 47.3 3.0 96 96-216 141-241 (324)
348 2qrv_A DNA (cytosine-5)-methyl 93.3 0.45 1.5E-05 40.3 9.2 71 99-176 14-91 (295)
349 4dup_A Quinone oxidoreductase; 93.2 0.013 4.3E-07 51.4 -0.6 97 95-216 162-265 (353)
350 1wly_A CAAR, 2-haloacrylate re 93.0 0.28 9.7E-06 42.2 7.7 95 95-216 140-244 (333)
351 3qv2_A 5-cytosine DNA methyltr 93.0 0.14 4.8E-06 44.2 5.6 70 100-177 9-85 (327)
352 3fbg_A Putative arginate lyase 92.9 0.23 7.8E-06 43.1 7.0 91 100-215 150-247 (346)
353 2cdc_A Glucose dehydrogenase g 92.7 0.16 5.4E-06 44.5 5.8 86 101-215 181-277 (366)
354 1xa0_A Putative NADPH dependen 92.7 0.067 2.3E-06 46.1 3.3 98 96-215 144-245 (328)
355 2dq4_A L-threonine 3-dehydroge 92.7 0.011 3.8E-07 51.4 -1.7 93 95-215 160-261 (343)
356 4dvj_A Putative zinc-dependent 92.7 0.23 7.7E-06 43.5 6.7 96 95-215 161-269 (363)
357 4h0n_A DNMT2; SAH binding, tra 92.6 0.21 7.2E-06 43.2 6.2 67 102-175 4-76 (333)
358 3s2e_A Zinc-containing alcohol 92.5 0.31 1.1E-05 42.0 7.3 98 94-215 160-262 (340)
359 3krt_A Crotonyl COA reductase; 92.5 0.31 1.1E-05 44.0 7.6 46 96-141 224-271 (456)
360 1iz0_A Quinone oxidoreductase; 92.5 0.025 8.5E-07 48.2 0.2 90 98-215 123-217 (302)
361 4f3n_A Uncharacterized ACR, CO 92.4 1.1 3.6E-05 40.1 10.6 45 101-145 138-188 (432)
362 1yqd_A Sinapyl alcohol dehydro 92.4 0.15 5.1E-06 44.7 5.1 97 95-215 181-281 (366)
363 3gaz_A Alcohol dehydrogenase s 92.1 0.17 5.9E-06 43.8 5.2 94 94-215 144-245 (343)
364 1pl8_A Human sorbitol dehydrog 91.8 0.33 1.1E-05 42.2 6.6 99 94-216 165-273 (356)
365 2cf5_A Atccad5, CAD, cinnamyl 91.5 0.12 4.2E-06 45.0 3.6 97 95-215 174-274 (357)
366 4eez_A Alcohol dehydrogenase 1 91.4 0.2 6.7E-06 43.4 4.8 101 94-215 157-262 (348)
367 1tt7_A YHFP; alcohol dehydroge 90.8 0.085 2.9E-06 45.4 1.8 98 96-215 145-246 (330)
368 3ubt_Y Modification methylase 90.6 0.55 1.9E-05 40.3 6.8 67 102-176 1-69 (331)
369 4a2c_A Galactitol-1-phosphate 90.1 1.2 4.1E-05 38.3 8.6 100 93-216 153-260 (346)
370 4a0s_A Octenoyl-COA reductase/ 90.1 0.32 1.1E-05 43.7 5.0 46 96-141 216-263 (447)
371 3tqh_A Quinone oxidoreductase; 89.9 0.54 1.8E-05 40.2 6.1 96 94-215 146-244 (321)
372 3pvc_A TRNA 5-methylaminomethy 89.0 0.33 1.1E-05 46.3 4.5 77 100-176 58-179 (689)
373 3ps9_A TRNA 5-methylaminomethy 88.9 0.61 2.1E-05 44.4 6.2 40 100-139 66-121 (676)
374 3llv_A Exopolyphosphatase-rela 88.6 2.1 7E-05 31.3 7.8 65 101-175 6-77 (141)
375 1cdo_A Alcohol dehydrogenase; 88.5 0.58 2E-05 40.9 5.4 97 95-215 187-293 (374)
376 1p0f_A NADP-dependent alcohol 88.4 0.55 1.9E-05 41.1 5.1 99 94-216 185-293 (373)
377 3me5_A Cytosine-specific methy 88.3 0.8 2.7E-05 41.6 6.2 58 101-162 88-146 (482)
378 3iht_A S-adenosyl-L-methionine 88.1 1.6 5.3E-05 33.0 6.5 43 88-131 29-72 (174)
379 3iei_A Leucine carboxyl methyl 87.8 7.2 0.00025 33.5 11.7 107 100-217 90-230 (334)
380 1e3i_A Alcohol dehydrogenase, 87.7 0.69 2.3E-05 40.5 5.4 98 95-216 190-297 (376)
381 1zsy_A Mitochondrial 2-enoyl t 87.4 0.39 1.3E-05 41.8 3.5 96 95-215 162-269 (357)
382 1piw_A Hypothetical zinc-type 87.2 0.75 2.6E-05 40.0 5.3 98 95-215 174-275 (360)
383 3ius_A Uncharacterized conserv 86.7 8.8 0.0003 31.5 11.6 66 102-179 6-74 (286)
384 3fwz_A Inner membrane protein 86.4 2.5 8.5E-05 31.0 7.1 65 101-175 7-78 (140)
385 4fn4_A Short chain dehydrogena 85.7 4.1 0.00014 33.5 8.7 75 100-177 6-93 (254)
386 1jvb_A NAD(H)-dependent alcoho 85.7 1.7 5.9E-05 37.4 6.8 95 95-215 165-270 (347)
387 4g81_D Putative hexonate dehyd 85.5 4.3 0.00015 33.4 8.8 77 100-179 8-97 (255)
388 3gqv_A Enoyl reductase; medium 85.5 0.36 1.2E-05 42.3 2.3 92 99-215 163-262 (371)
389 3jv7_A ADH-A; dehydrogenase, n 84.8 1.7 5.8E-05 37.4 6.3 95 97-216 168-270 (345)
390 2hcy_A Alcohol dehydrogenase 1 84.5 1.2 4.2E-05 38.4 5.2 95 95-215 164-268 (347)
391 3c85_A Putative glutathione-re 84.4 1.8 6.1E-05 33.4 5.7 65 101-175 39-112 (183)
392 4hp8_A 2-deoxy-D-gluconate 3-d 83.8 12 0.00042 30.5 10.7 74 100-178 8-89 (247)
393 1pjc_A Protein (L-alanine dehy 83.7 0.61 2.1E-05 40.7 2.9 98 101-214 167-265 (361)
394 1vj0_A Alcohol dehydrogenase, 83.6 1.9 6.5E-05 37.7 6.1 98 95-216 189-298 (380)
395 3ioy_A Short-chain dehydrogena 83.5 5 0.00017 34.0 8.6 79 100-179 7-98 (319)
396 1h2b_A Alcohol dehydrogenase; 83.2 2.5 8.6E-05 36.6 6.7 46 96-141 182-229 (359)
397 3l9w_A Glutathione-regulated p 83.0 5.8 0.0002 35.2 9.0 65 101-175 4-75 (413)
398 4dio_A NAD(P) transhydrogenase 82.9 1.6 5.4E-05 38.7 5.2 42 100-141 189-231 (405)
399 2zig_A TTHA0409, putative modi 82.7 0.45 1.5E-05 40.3 1.6 67 151-217 21-98 (297)
400 1gu7_A Enoyl-[acyl-carrier-pro 82.4 0.31 1E-05 42.5 0.5 39 96-134 162-203 (364)
401 2vhw_A Alanine dehydrogenase; 81.9 0.63 2.2E-05 40.9 2.3 101 100-216 167-268 (377)
402 3p2y_A Alanine dehydrogenase/p 80.4 0.6 2.1E-05 41.0 1.6 42 100-141 183-225 (381)
403 3ucx_A Short chain dehydrogena 79.8 12 0.0004 30.6 9.4 74 100-176 10-96 (264)
404 4dcm_A Ribosomal RNA large sub 79.7 6.7 0.00023 34.2 8.2 68 100-174 38-106 (375)
405 1xg5_A ARPG836; short chain de 79.3 8.8 0.0003 31.5 8.6 78 100-178 31-121 (279)
406 3nyw_A Putative oxidoreductase 79.2 9.8 0.00034 30.8 8.7 78 100-178 6-97 (250)
407 3lf2_A Short chain oxidoreduct 78.9 9.9 0.00034 31.0 8.7 77 100-178 7-97 (265)
408 3o38_A Short chain dehydrogena 78.7 11 0.00036 30.7 8.8 77 100-178 21-111 (266)
409 3sju_A Keto reductase; short-c 78.4 8.9 0.00031 31.7 8.3 75 100-178 23-111 (279)
410 3tjr_A Short chain dehydrogena 78.2 10 0.00035 31.7 8.7 77 100-179 30-119 (301)
411 1boo_A Protein (N-4 cytosine-s 77.9 1.1 3.8E-05 38.4 2.5 63 150-217 13-85 (323)
412 2eez_A Alanine dehydrogenase; 77.4 0.93 3.2E-05 39.7 1.9 98 100-215 165-265 (369)
413 1lss_A TRK system potassium up 77.3 16 0.00054 26.0 8.6 66 101-175 4-76 (140)
414 3swr_A DNA (cytosine-5)-methyl 76.7 5.4 0.00018 39.6 7.2 42 101-143 540-583 (1002)
415 4imr_A 3-oxoacyl-(acyl-carrier 76.7 9.9 0.00034 31.3 8.1 76 100-178 32-119 (275)
416 3oec_A Carveol dehydrogenase ( 76.6 12 0.0004 31.7 8.6 76 100-178 45-145 (317)
417 3qiv_A Short-chain dehydrogena 76.5 11 0.00037 30.4 8.2 76 100-178 8-96 (253)
418 3t4x_A Oxidoreductase, short c 76.3 9.3 0.00032 31.2 7.8 78 100-178 9-95 (267)
419 1iy8_A Levodione reductase; ox 76.0 14 0.00047 30.2 8.7 78 100-178 12-102 (267)
420 4egf_A L-xylulose reductase; s 75.9 15 0.00052 29.9 9.0 76 100-178 19-108 (266)
421 3gaf_A 7-alpha-hydroxysteroid 75.9 12 0.00042 30.3 8.3 75 100-178 11-99 (256)
422 3h7a_A Short chain dehydrogena 75.5 7.1 0.00024 31.7 6.8 75 100-178 6-93 (252)
423 3svt_A Short-chain type dehydr 75.2 13 0.00044 30.6 8.4 78 100-178 10-101 (281)
424 2zb4_A Prostaglandin reductase 74.5 5.1 0.00017 34.5 5.9 96 94-215 152-259 (357)
425 3o26_A Salutaridine reductase; 74.4 12 0.00041 31.0 8.2 78 100-179 11-102 (311)
426 3ic5_A Putative saccharopine d 74.4 18 0.00061 24.7 9.3 67 100-176 4-77 (118)
427 3lyl_A 3-oxoacyl-(acyl-carrier 74.2 14 0.00047 29.6 8.2 76 100-178 4-92 (247)
428 3rkr_A Short chain oxidoreduct 73.8 12 0.0004 30.5 7.7 76 100-178 28-116 (262)
429 3tfo_A Putative 3-oxoacyl-(acy 73.0 12 0.00042 30.6 7.7 76 100-178 3-91 (264)
430 3v8b_A Putative dehydrogenase, 72.9 15 0.00051 30.4 8.3 76 100-178 27-115 (283)
431 3imf_A Short chain dehydrogena 72.5 11 0.00037 30.7 7.2 75 100-177 5-92 (257)
432 3pi7_A NADH oxidoreductase; gr 71.4 3.3 0.00011 35.6 3.9 92 100-216 163-263 (349)
433 3pk0_A Short-chain dehydrogena 71.4 16 0.00053 29.8 7.9 77 100-178 9-98 (262)
434 2jah_A Clavulanic acid dehydro 70.7 23 0.00078 28.4 8.7 76 100-178 6-94 (247)
435 3t7c_A Carveol dehydrogenase; 70.6 21 0.0007 29.7 8.7 76 100-178 27-127 (299)
436 3awd_A GOX2181, putative polyo 70.3 22 0.00076 28.5 8.7 76 100-178 12-100 (260)
437 1yb1_A 17-beta-hydroxysteroid 70.1 22 0.00077 28.9 8.7 76 100-178 30-118 (272)
438 3ppi_A 3-hydroxyacyl-COA dehyd 69.9 16 0.00055 30.0 7.8 70 100-175 29-110 (281)
439 2rhc_B Actinorhodin polyketide 69.9 23 0.00078 29.0 8.7 76 100-178 21-109 (277)
440 1ae1_A Tropinone reductase-I; 69.8 23 0.0008 28.9 8.7 76 100-178 20-109 (273)
441 4fs3_A Enoyl-[acyl-carrier-pro 69.7 20 0.00069 29.1 8.2 76 100-177 5-95 (256)
442 3ftp_A 3-oxoacyl-[acyl-carrier 69.5 16 0.00056 29.9 7.7 76 100-178 27-115 (270)
443 3pgx_A Carveol dehydrogenase; 69.2 22 0.00076 29.1 8.5 76 100-179 14-116 (280)
444 3pxx_A Carveol dehydrogenase; 69.1 23 0.00078 29.0 8.6 76 100-178 9-109 (287)
445 1zem_A Xylitol dehydrogenase; 69.0 23 0.00078 28.7 8.5 76 100-178 6-94 (262)
446 3rku_A Oxidoreductase YMR226C; 69.0 17 0.00057 30.2 7.7 77 100-178 32-125 (287)
447 3sx2_A Putative 3-ketoacyl-(ac 68.9 22 0.00076 29.0 8.4 77 100-179 12-113 (278)
448 3r1i_A Short-chain type dehydr 68.9 14 0.00048 30.4 7.1 77 100-179 31-120 (276)
449 3uve_A Carveol dehydrogenase ( 68.6 23 0.00079 29.1 8.5 76 100-178 10-114 (286)
450 1xu9_A Corticosteroid 11-beta- 68.5 18 0.00062 29.8 7.8 74 100-175 27-113 (286)
451 3gvc_A Oxidoreductase, probabl 67.9 22 0.00076 29.2 8.2 74 100-179 28-114 (277)
452 4fgs_A Probable dehydrogenase 67.7 24 0.00082 29.2 8.3 73 100-178 28-113 (273)
453 2vz8_A Fatty acid synthase; tr 67.6 1.8 6.2E-05 47.5 1.7 100 95-215 1662-1769(2512)
454 3nzo_A UDP-N-acetylglucosamine 67.6 15 0.00051 32.1 7.4 82 100-182 34-126 (399)
455 1oaa_A Sepiapterin reductase; 67.3 16 0.00053 29.6 7.1 61 100-161 5-71 (259)
456 2ae2_A Protein (tropinone redu 67.0 24 0.00084 28.4 8.2 76 100-178 8-97 (260)
457 4eso_A Putative oxidoreductase 66.9 20 0.00067 29.1 7.6 73 100-178 7-92 (255)
458 4ibo_A Gluconate dehydrogenase 66.9 13 0.00044 30.5 6.5 77 100-179 25-114 (271)
459 3h2s_A Putative NADH-flavin re 66.8 28 0.00096 27.0 8.4 69 102-179 1-73 (224)
460 3tox_A Short chain dehydrogena 66.8 11 0.00039 31.1 6.2 75 100-177 7-94 (280)
461 3cxt_A Dehydrogenase with diff 66.6 27 0.00093 28.9 8.6 76 100-178 33-121 (291)
462 3guy_A Short-chain dehydrogena 66.5 42 0.0014 26.4 9.4 70 103-178 3-82 (230)
463 3tsc_A Putative oxidoreductase 66.5 29 0.00099 28.3 8.7 77 100-179 10-112 (277)
464 2gdz_A NAD+-dependent 15-hydro 66.4 20 0.0007 29.0 7.7 79 100-179 6-97 (267)
465 4da9_A Short-chain dehydrogena 65.7 32 0.0011 28.3 8.7 76 100-178 28-117 (280)
466 2z1n_A Dehydrogenase; reductas 65.3 32 0.0011 27.7 8.6 77 100-178 6-95 (260)
467 4dry_A 3-oxoacyl-[acyl-carrier 64.9 17 0.00057 30.0 6.9 77 100-178 32-121 (281)
468 3i1j_A Oxidoreductase, short c 64.5 27 0.00091 27.8 7.9 77 100-178 13-104 (247)
469 1y1p_A ARII, aldehyde reductas 64.1 57 0.0019 27.1 10.3 79 99-179 9-94 (342)
470 2zat_A Dehydrogenase/reductase 64.0 31 0.001 27.8 8.3 76 100-178 13-101 (260)
471 3ai3_A NADPH-sorbose reductase 63.8 35 0.0012 27.5 8.6 76 100-178 6-95 (263)
472 2b4q_A Rhamnolipids biosynthes 63.7 19 0.00066 29.5 7.0 75 100-178 28-115 (276)
473 2qq5_A DHRS1, dehydrogenase/re 63.6 23 0.00079 28.6 7.4 74 100-176 4-91 (260)
474 3rwb_A TPLDH, pyridoxal 4-dehy 63.5 23 0.00077 28.5 7.3 72 100-178 5-90 (247)
475 4e6p_A Probable sorbitol dehyd 63.4 33 0.0011 27.7 8.3 73 100-178 7-92 (259)
476 3s55_A Putative short-chain de 63.4 35 0.0012 27.8 8.6 77 100-179 9-110 (281)
477 3f1l_A Uncharacterized oxidore 63.4 26 0.0009 28.1 7.7 77 100-178 11-102 (252)
478 1xkq_A Short-chain reductase f 63.3 23 0.00078 29.0 7.4 78 100-178 5-96 (280)
479 3rih_A Short chain dehydrogena 63.3 14 0.00048 30.8 6.1 77 100-178 40-129 (293)
480 3l6e_A Oxidoreductase, short-c 62.9 26 0.00088 27.9 7.5 72 101-178 3-87 (235)
481 3e8x_A Putative NAD-dependent 62.7 26 0.00088 27.7 7.4 72 100-180 20-96 (236)
482 3l77_A Short-chain alcohol deh 62.7 39 0.0014 26.6 8.6 77 101-180 2-92 (235)
483 4iin_A 3-ketoacyl-acyl carrier 62.6 31 0.0011 28.0 8.1 76 100-178 28-117 (271)
484 1geg_A Acetoin reductase; SDR 62.0 40 0.0014 27.1 8.6 73 102-177 3-88 (256)
485 4fc7_A Peroxisomal 2,4-dienoyl 61.9 27 0.00094 28.5 7.6 76 100-177 26-114 (277)
486 3grk_A Enoyl-(acyl-carrier-pro 61.7 43 0.0015 27.7 8.9 76 100-179 30-120 (293)
487 4g65_A TRK system potassium up 61.5 11 0.00037 34.0 5.3 65 101-174 3-74 (461)
488 3oid_A Enoyl-[acyl-carrier-pro 61.3 35 0.0012 27.5 8.2 76 100-178 3-92 (258)
489 3n74_A 3-ketoacyl-(acyl-carrie 61.2 37 0.0013 27.2 8.3 74 100-179 8-94 (261)
490 1fmc_A 7 alpha-hydroxysteroid 60.9 33 0.0011 27.3 7.9 76 100-178 10-98 (255)
491 3f9i_A 3-oxoacyl-[acyl-carrier 60.8 37 0.0013 27.0 8.1 74 99-178 12-94 (249)
492 4dmm_A 3-oxoacyl-[acyl-carrier 60.5 36 0.0012 27.7 8.1 76 100-178 27-116 (269)
493 3ado_A Lambda-crystallin; L-gu 60.5 14 0.00048 31.5 5.6 44 100-144 5-50 (319)
494 3oig_A Enoyl-[acyl-carrier-pro 60.3 37 0.0013 27.4 8.2 77 100-178 6-97 (266)
495 3edm_A Short chain dehydrogena 60.3 33 0.0011 27.7 7.8 74 100-177 7-95 (259)
496 1vl8_A Gluconate 5-dehydrogena 60.0 43 0.0015 27.2 8.5 76 100-178 20-109 (267)
497 1id1_A Putative potassium chan 59.8 33 0.0011 25.0 7.1 67 102-175 4-78 (153)
498 1wma_A Carbonyl reductase [NAD 59.8 38 0.0013 27.2 8.1 75 100-177 3-91 (276)
499 2uvd_A 3-oxoacyl-(acyl-carrier 59.4 40 0.0014 26.9 8.1 76 100-178 3-92 (246)
500 3ged_A Short-chain dehydrogena 59.3 28 0.00095 28.3 7.0 69 102-177 3-84 (247)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.92 E-value=1.2e-23 Score=178.98 Aligned_cols=182 Identities=14% Similarity=0.137 Sum_probs=128.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
++++.+|||||||||..+..+++. ++++|+|+|+|+.|++.|++++...+...+++++++|+.++|++ .||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--cccccee
Confidence 568899999999999999999864 46799999999999999999998888777899999999988764 5999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccc-------cccccchhH
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSL-------SSFRLTSVG 247 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g 247 (305)
..+++|+++.+... ++++++++|||||.+++.+....... .....+..+ .++....+.
T Consensus 146 ~~~l~~~~~~~~~~---------~l~~i~~~LkpGG~lii~e~~~~~~~------~~~~~~~~~~~~~~~~~g~s~~ei~ 210 (261)
T 4gek_A 146 NFTLQFLEPSERQA---------LLDKIYQGLNPGGALVLSEKFSFEDA------KVGELLFNMHHDFKRANGYSELEIS 210 (261)
T ss_dssp ESCGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEEBCCSSH------HHHHHHHHHHHHHHHHTTGGGSTTH
T ss_pred eeeeeecCchhHhH---------HHHHHHHHcCCCcEEEEEeccCCCCH------HHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 99999998776533 69999999999999999875332110 000000000 000000000
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCCC
Q 042544 248 RFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQH 304 (305)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~~ 304 (305)
.. ...++ ..+.|.+.+++..+++++||..++.. --+.....++|+||..
T Consensus 211 --~~---~~~l~-~~~~~~s~~~~~~~L~~AGF~~ve~~--fq~~nF~~~iA~K~~~ 259 (261)
T 4gek_A 211 --QK---RSMLE-NVMLTDSVETHKARLHKAGFEHSELW--FQCFNFGSLVALKAED 259 (261)
T ss_dssp --HH---HHHHH-HHCCCBCHHHHHHHHHHHTCSEEEEE--EEETTEEEEEEECCTT
T ss_pred --HH---Hhhhc-ccccCCCHHHHHHHHHHcCCCeEEEE--EEeccEEEEEEEEcCC
Confidence 00 01111 12456777889999999999766521 1122344589999974
No 2
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.92 E-value=5.8e-24 Score=182.44 Aligned_cols=159 Identities=34% Similarity=0.574 Sum_probs=125.9
Q ss_pred HHHHHHHhhhHHHHHhhcCCccccccCCCC----ccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCC
Q 042544 49 DMVNKYYDLVTSFYEFGWGESFHFAPRWKG----ESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSST 124 (305)
Q Consensus 49 ~~~~~~yd~~~~~y~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 124 (305)
+.++++||..+++|+..+++.++++ .|.. ..+.++.....+.+...+.+.++.+|||||||+|.++..+++..+.
T Consensus 7 ~~~~~~Yd~~~~~y~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 85 (273)
T 3bus_A 7 EEVRQMYDDFTDPFARIWGENLHFG-YWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDV 85 (273)
T ss_dssp ----------------CCGGGCCCC-CCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCC
T ss_pred HHHHHHHcchHHHHHHHcCCCceEE-ecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCC
Confidence 4577889999999998888877663 3432 4677888888888888999889999999999999999999965588
Q ss_pred eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHH
Q 042544 125 SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLE 204 (305)
Q Consensus 125 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 204 (305)
+|+|+|+|+.+++.+++++...++.++++++++|+.++|+++++||+|++..+++|+++... +++++.+
T Consensus 86 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-----------~l~~~~~ 154 (273)
T 3bus_A 86 RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGR-----------ALREMAR 154 (273)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHH-----------HHHHHHT
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHH-----------HHHHHHH
Confidence 99999999999999999998888877899999999999998899999999999999998865 6999999
Q ss_pred HHHhCCceEEEeccC
Q 042544 205 ALKQAGFEVIWEKDL 219 (305)
Q Consensus 205 ~L~~gG~~~i~~~~~ 219 (305)
+|+|||.+++.+...
T Consensus 155 ~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 155 VLRPGGTVAIADFVL 169 (273)
T ss_dssp TEEEEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEeec
Confidence 999999999987543
No 3
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.91 E-value=3.8e-23 Score=179.58 Aligned_cols=164 Identities=30% Similarity=0.480 Sum_probs=138.6
Q ss_pred hhHHHHHHHHHhhh--HHHHHhhcC-CccccccCCC----CccHHHHHHHHHHHHHHHc----CCCCCCeEEEEcCCCCh
Q 042544 45 ANYTDMVNKYYDLV--TSFYEFGWG-ESFHFAPRWK----GESLRESIKRHEHFLALQL----GLKSGQKVLDVGCGIGG 113 (305)
Q Consensus 45 ~~~~~~~~~~yd~~--~~~y~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~----~~~~~~~vLDiGcG~G~ 113 (305)
....+.+.++||.. .++|+..|+ +.++++ .|. ...+........+.+...+ .+.++.+|||||||+|.
T Consensus 17 ~~~~~~~~~~Yd~~~~~~~y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~ 95 (297)
T 2o57_A 17 KTVKDNAEIYYDDDDSDRFYFHVWGGEDIHVG-LYKEPVDQDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGG 95 (297)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSCCCSC-CCCSSGGGSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSH
T ss_pred HHHHHHHHHHcCCccchhHHHHHhCCCceEEE-ecCCCCCCcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCH
Confidence 34456788899986 489988775 455553 343 4467777888888888877 88899999999999999
Q ss_pred HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCC
Q 042544 114 PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGL 193 (305)
Q Consensus 114 ~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~ 193 (305)
++..+++..+.+|+|+|+|+.+++.|+++....++..+++++++|+.++|+++++||+|++..+++|++++..
T Consensus 96 ~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~------- 168 (297)
T 2o57_A 96 AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLK------- 168 (297)
T ss_dssp HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHH-------
T ss_pred HHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHH-------
Confidence 9999996547899999999999999999998888877899999999999998999999999999999999755
Q ss_pred CCcccHHHHHHHHHhCCceEEEeccCC
Q 042544 194 PDIRSTRKCLEALKQAGFEVIWEKDLA 220 (305)
Q Consensus 194 ~~~~~l~~~~~~L~~gG~~~i~~~~~~ 220 (305)
+++++.++|+|||.+++.+....
T Consensus 169 ----~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 169 ----VFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp ----HHHHHHHHEEEEEEEEEEEEEEC
T ss_pred ----HHHHHHHHcCCCeEEEEEEeccC
Confidence 69999999999999999876443
No 4
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.90 E-value=8.2e-23 Score=177.98 Aligned_cols=168 Identities=19% Similarity=0.265 Sum_probs=138.5
Q ss_pred hhHHHHHHHHHhhhHHHHHhhcCCccccccC-CC--CccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh
Q 042544 45 ANYTDMVNKYYDLVTSFYEFGWGESFHFAPR-WK--GESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF 121 (305)
Q Consensus 45 ~~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~ 121 (305)
..-.+.++++||..+++|+..++....++.. |. ...+.++.....+.+...+.+.++.+|||||||+|.++..+++.
T Consensus 14 ~~~~~~i~~~Yd~~~~~y~~~l~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~ 93 (302)
T 3hem_A 14 KPPVEAVRSHYDKSNEFFKLWLDPSMTYSCAYFERPDMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAE 93 (302)
T ss_dssp CCCHHHHHHHHTSCHHHHHHHSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHH
T ss_pred cchHHHHHHhcCCCHHHHHHhcCCCCceeeEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHh
Confidence 3446789999999999999999987776544 32 34677888888888888888999999999999999999999965
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCC-CcccHH
Q 042544 122 SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLP-DIRSTR 200 (305)
Q Consensus 122 ~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~-~~~~l~ 200 (305)
.+.+|+|+|+|+.+++.|++++...++..+++++++|+.++ +++||+|++..+++|++++.... +.. ...+++
T Consensus 94 ~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~---~~~~~~~~l~ 167 (302)
T 3hem_A 94 YDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDA---GFERYDTFFK 167 (302)
T ss_dssp HCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCC---CTTHHHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCcccccc---chhHHHHHHH
Confidence 46899999999999999999999988877899999999876 68899999999999998762000 000 012699
Q ss_pred HHHHHHHhCCceEEEecc
Q 042544 201 KCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 201 ~~~~~L~~gG~~~i~~~~ 218 (305)
++.++|+|||.+++.+..
T Consensus 168 ~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 168 KFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp HHHHSSCTTCEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEEEe
Confidence 999999999999998754
No 5
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.89 E-value=4e-22 Score=172.28 Aligned_cols=160 Identities=19% Similarity=0.221 Sum_probs=134.7
Q ss_pred HHHHHHHHhhhHHHHHhhcCCcccccc-CC--CCccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCC
Q 042544 48 TDMVNKYYDLVTSFYEFGWGESFHFAP-RW--KGESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSST 124 (305)
Q Consensus 48 ~~~~~~~yd~~~~~y~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 124 (305)
.+.++.+||..+++|+..+++..+++. .| ....+.++.....+.+...+.+.++.+|||||||+|.++..+++..+.
T Consensus 9 ~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~ 88 (287)
T 1kpg_A 9 FANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV 88 (287)
T ss_dssp HHHHHHHHTSCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC
T ss_pred HHHHHHhcCCCHHHHHHhcCCCCCcceEEecCCCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC
Confidence 457899999999999998888766643 34 235677888888888888888889999999999999999999944478
Q ss_pred eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHH
Q 042544 125 SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLE 204 (305)
Q Consensus 125 ~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~ 204 (305)
+|+|+|+|+.+++.+++++...+...+++++++|+.++| ++||+|++..+++|+++..... +++++.+
T Consensus 89 ~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~---------~l~~~~~ 156 (287)
T 1kpg_A 89 NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDA---------FFSLAHR 156 (287)
T ss_dssp EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHH---------HHHHHHH
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHH---------HHHHHHH
Confidence 999999999999999999988887778999999998765 7899999999999996433221 6999999
Q ss_pred HHHhCCceEEEeccC
Q 042544 205 ALKQAGFEVIWEKDL 219 (305)
Q Consensus 205 ~L~~gG~~~i~~~~~ 219 (305)
+|+|||.+++.+...
T Consensus 157 ~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 157 LLPADGVMLLHTITG 171 (287)
T ss_dssp HSCTTCEEEEEEEEE
T ss_pred hcCCCCEEEEEEecC
Confidence 999999999987544
No 6
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.87 E-value=1.6e-21 Score=171.04 Aligned_cols=163 Identities=17% Similarity=0.261 Sum_probs=133.1
Q ss_pred hHHHHHHHHHhhhHHHHHhhcCCccccccC-CC--CccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc
Q 042544 46 NYTDMVNKYYDLVTSFYEFGWGESFHFAPR-WK--GESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS 122 (305)
Q Consensus 46 ~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 122 (305)
.-.+.++++||..+++|+..++...+++.. |. ...+.++.....+.+...+.+.++.+|||||||+|.++..+++..
T Consensus 33 ~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 112 (318)
T 2fk8_A 33 TRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF 112 (318)
T ss_dssp -----CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH
T ss_pred hhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHC
Confidence 345678889999999999888877666433 32 456777777788888888888899999999999999999999654
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHH
Q 042544 123 STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKC 202 (305)
Q Consensus 123 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 202 (305)
+.+|+|+|+|+.+++.|++++...++..+++++++|+.+++ ++||+|++..+++|+++..... +++++
T Consensus 113 ~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~---------~l~~~ 180 (318)
T 2fk8_A 113 DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDD---------FFKRC 180 (318)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHH---------HHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHH---------HHHHH
Confidence 78999999999999999999988887778999999998764 7899999999999996543322 69999
Q ss_pred HHHHHhCCceEEEeccCC
Q 042544 203 LEALKQAGFEVIWEKDLA 220 (305)
Q Consensus 203 ~~~L~~gG~~~i~~~~~~ 220 (305)
.++|+|||.+++.+....
T Consensus 181 ~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 181 FNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp HHHSCTTCEEEEEEEECC
T ss_pred HHhcCCCcEEEEEEeccC
Confidence 999999999999876543
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.87 E-value=1.4e-21 Score=161.74 Aligned_cols=115 Identities=21% Similarity=0.250 Sum_probs=103.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
..+...+...++ +|||+|||+|.++..+++.++.+|+|+|+|+.+++.|++++...+...+++++++|+.++++++++|
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 112 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYA 112 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCE
T ss_pred HHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccc
Confidence 444555666666 9999999999999999976678999999999999999999998888778999999999999988999
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++..+++|+++... +++++.++|+|||.+++.+
T Consensus 113 D~v~~~~~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 113 DLIVSRGSVFFWEDVAT-----------AFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EEEEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECchHhhccCHHH-----------HHHHHHHhCCCCCEEEEEe
Confidence 99999999999988766 5999999999999999975
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=2.4e-21 Score=162.38 Aligned_cols=178 Identities=16% Similarity=0.179 Sum_probs=124.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
..++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+ +++++++|+.+++++ ++||+|++..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-CCceEEEEeC
Confidence 457789999999999999999954 57899999999999999999875433 799999999998876 8999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHH-----
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVT----- 251 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----- 251 (305)
+++|++++.... +++++.++|+|||.+++.+....... + ... ........+..
T Consensus 118 ~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~~~~~---~---~~~-------~~~~~~~~~~~~~~~~ 175 (234)
T 3dtn_A 118 SIHHLEDEDKKE---------LYKRSYSILKESGIFINADLVHGETA---F---IEN-------LNKTIWRQYVENSGLT 175 (234)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEECBCSSH---H---HHH-------HHHHHHHHHHHTSSCC
T ss_pred ccccCCHHHHHH---------HHHHHHHhcCCCcEEEEEEecCCCCh---h---hhh-------HHHHHHHHHHHhcCCC
Confidence 999998876432 69999999999999999875432110 0 000 00000000000
Q ss_pred -HHHHHHHH-HhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCC
Q 042544 252 -RNMVKALE-FVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 252 -~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~ 303 (305)
..+..... .....+.+.+++..+++++||..++. .....+..++.+.|+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~--~~~~~~~~~~~~~~~~ 227 (234)
T 3dtn_A 176 EEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSC--IYKYYQFAVMFGRKTE 227 (234)
T ss_dssp HHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEE--EEEETTEEEEEEECC-
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHHHcCCCceee--eeeecceeEEEEEecc
Confidence 00000000 01234456688999999999998873 2334556678888874
No 9
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.86 E-value=2.7e-21 Score=165.00 Aligned_cols=161 Identities=11% Similarity=0.060 Sum_probs=123.1
Q ss_pred HHHHHhhHHHHHHHHHhhhHHHHHhhcCCccccccC-C---CCccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHH
Q 042544 40 EEERKANYTDMVNKYYDLVTSFYEFGWGESFHFAPR-W---KGESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPL 115 (305)
Q Consensus 40 ~~~~~~~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~ 115 (305)
.+...+...+.+.++|+....+|+..|+.+++.+.. | ......+........-...+.+.++.+|||||||+|.++
T Consensus 58 ~~~~~~~l~~~~~~~y~~~~~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~t 137 (298)
T 3fpf_A 58 DDAEMNHALSLIRKFYVNLGMKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLT 137 (298)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHH
Confidence 445677888999999999999999999988754421 0 001111111111111223678899999999999999776
Q ss_pred HH-HHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCC
Q 042544 116 RE-IAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLP 194 (305)
Q Consensus 116 ~~-l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~ 194 (305)
.. +++.++++|+|+|+|+.|++.|+++++..++ .+++++++|+.+++ +++||+|++... .++...
T Consensus 138 a~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~-------- 203 (298)
T 3fpf_A 138 GILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL---AEPKRR-------- 203 (298)
T ss_dssp HHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHH--------
T ss_pred HHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC---ccCHHH--------
Confidence 44 5565789999999999999999999998888 78999999998865 688999997554 455544
Q ss_pred CcccHHHHHHHHHhCCceEEEec
Q 042544 195 DIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 195 ~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++++.++|||||.+++...
T Consensus 204 ---~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 204 ---VFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ---HHHHHHHHCCTTCEEEEEEC
T ss_pred ---HHHHHHHHcCCCcEEEEEcC
Confidence 69999999999999999764
No 10
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.86 E-value=4.4e-21 Score=159.01 Aligned_cols=164 Identities=20% Similarity=0.212 Sum_probs=129.5
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+...+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++...+.. +++++++|+..+++++++|
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~f 107 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTV 107 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCE
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCe
Confidence 344567788899999999999999999964 3579999999999999999998887765 7999999999988888999
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
|+|++..+++|+++... +++++.++|+|||.+++.+.........+ +..
T Consensus 108 D~v~~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~l~i~~~~~~~~~~~~---~~~----------------- 156 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPLK-----------FLEELKRVAKPFAYLAIIDWKKEERDKGP---PPE----------------- 156 (219)
T ss_dssp EEEEEESCGGGCSSHHH-----------HHHHHHHHEEEEEEEEEEEECSSCCSSSC---CGG-----------------
T ss_pred eEEEeehhhhhcCCHHH-----------HHHHHHHHhCCCeEEEEEEecccccccCC---chh-----------------
Confidence 99999999999988765 69999999999999999875433211110 000
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCC
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~ 303 (305)
...+.+++..+++++||+++... ......++++++|+.
T Consensus 157 --------------~~~~~~~~~~~l~~~Gf~~~~~~--~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 157 --------------EVYSEWEVGLILEDAGIRVGRVV--EVGKYCFGVYAMIVK 194 (219)
T ss_dssp --------------GSCCHHHHHHHHHHTTCEEEEEE--EETTTEEEEEEECC-
T ss_pred --------------cccCHHHHHHHHHHCCCEEEEEE--eeCCceEEEEEEecc
Confidence 01245688999999999887732 333456788999985
No 11
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.86 E-value=2.9e-21 Score=166.72 Aligned_cols=113 Identities=17% Similarity=0.204 Sum_probs=99.0
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCCee
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNSFD 170 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD 170 (305)
++..+.. ++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++..+++++++|+.+++ +++++||
T Consensus 61 ~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 138 (285)
T 4htf_A 61 VLAEMGP-QKLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVD 138 (285)
T ss_dssp HHHHTCS-SCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEE
T ss_pred HHHhcCC-CCCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCce
Confidence 3334444 3679999999999999999976 78999999999999999999988877678999999999877 7789999
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++..+++|++++.. +++++.++|+|||.+++.+.
T Consensus 139 ~v~~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 139 LILFHAVLEWVADPRS-----------VLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEEEESCGGGCSCHHH-----------HHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhcccCHHH-----------HHHHHHHHcCCCeEEEEEEe
Confidence 9999999999998866 69999999999999999764
No 12
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.85 E-value=5.4e-21 Score=166.70 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=131.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHH--hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIA--QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~--~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
.+.++.+|||||||+|.++..++ ..++.+|+|+|+|+.+++.|++++...+...+++++++|+.+++++ ++||+|++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 45678999999999999999995 4567899999999999999999998888777799999999998887 89999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCC--CCCccccCCCcccccccccchhHHHHHH
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSP--LPWYLPLDTSHFSLSSFRLTSVGRFVTR 252 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 252 (305)
..+++|++++... ..+++++.++|+|||.+++.+........ .+|.. . ...........
T Consensus 194 ~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~---------~--~~~~~~~~~~~ 254 (305)
T 3ocj_A 194 NGLNIYEPDDARV--------TELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDM---------Q--AIDPHDLQLQQ 254 (305)
T ss_dssp CSSGGGCCCHHHH--------HHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCG---------G--GSCHHHHHHHH
T ss_pred CChhhhcCCHHHH--------HHHHHHHHHhcCCCeEEEEEecCCCCccccccccee---------e--ccccchhhhhh
Confidence 9999999988653 12599999999999999997643221110 11211 0 01111111111
Q ss_pred HHHHHHHHhcc-CCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCC
Q 042544 253 NMVKALEFVGL-APKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 253 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~ 303 (305)
.........++ ...+.+++..+++++||+++.... ........++|+||+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~-~~~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 255 LVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED-DRARLFPTVIARKPA 305 (305)
T ss_dssp HHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC-CTTSSSCEEEEECCC
T ss_pred hHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc-ccCceeeEEEEecCC
Confidence 11111101112 224668999999999998877432 223344578999985
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.85 E-value=1.5e-20 Score=160.01 Aligned_cols=113 Identities=26% Similarity=0.362 Sum_probs=100.2
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeE
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDA 171 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 171 (305)
+...+.+.++.+|||||||+|.++..+++. ..+|+|+|+|+.|++.|++++...+.. ++.++++|+..+|+++++||+
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~ 106 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHI 106 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEE
Confidence 444567778899999999999999999976 469999999999999999998877764 799999999999999999999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|++..+++|++++.. +++++.++|+|||.+++.+.
T Consensus 107 V~~~~~l~~~~d~~~-----------~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 107 VTCRIAAHHFPNPAS-----------FVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EEEhhhhHhcCCHHH-----------HHHHHHHHcCCCCEEEEEEc
Confidence 999999999999866 69999999999999999764
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.84 E-value=1.4e-20 Score=156.06 Aligned_cols=169 Identities=18% Similarity=0.159 Sum_probs=121.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.. .+++++++|+.+++++ ++||+|++..+
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~ 115 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYA 115 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcc
Confidence 347889999999999999999976 7899999999999999988753 4689999999998887 89999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHH-HH
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNM-VK 256 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~ 256 (305)
++|++++.... +++++.++|+|||.+++.+...... . ............. ..
T Consensus 116 l~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~~~~~~---------~---------~~~~~~~~~~~~~~~~ 168 (220)
T 3hnr_A 116 FHHLTDDEKNV---------AIAKYSQLLNKGGKIVFADTIFADQ---------D---------AYDKTVEAAKQRGFHQ 168 (220)
T ss_dssp GGGSCHHHHHH---------HHHHHHHHSCTTCEEEEEEECBSSH---------H---------HHHHHHHHHHHTTCHH
T ss_pred hhcCChHHHHH---------HHHHHHHhcCCCCEEEEEeccccCh---------H---------HHHHHHHHHHhCCCcc
Confidence 99999986532 5999999999999999986432210 0 0000000000000 00
Q ss_pred -HHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCC
Q 042544 257 -ALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~ 303 (305)
..........+.+++..+++++||+++.. ....-.+++.++||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~---~~~~~~w~~~~~~~~ 213 (220)
T 3hnr_A 169 LANDLQTEYYTRIPVMQTIFENNGFHVTFT---RLNHFVWVMEATKQL 213 (220)
T ss_dssp HHHHHHHSCCCBHHHHHHHHHHTTEEEEEE---ECSSSEEEEEEEECS
T ss_pred chhhcchhhcCCHHHHHHHHHHCCCEEEEe---eccceEEEEeehhhh
Confidence 00111112235679999999999987662 233445678888874
No 15
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.84 E-value=7.5e-21 Score=166.32 Aligned_cols=118 Identities=21% Similarity=0.263 Sum_probs=104.4
Q ss_pred HHHHHHcC-CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLG-LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
+.+...+. +.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...++..+++++++|+.++++++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 44555666 78899999999999999999996557899999999999999999999988877899999999999988899
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
||+|++..+++|++ ... +++++.++|+|||.+++.+...
T Consensus 186 fD~V~~~~~l~~~~-~~~-----------~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 186 VTASWNNESTMYVD-LHD-----------LFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEEEEESCGGGSC-HHH-----------HHHHHHHHEEEEEEEEEEEEEE
T ss_pred EeEEEECCchhhCC-HHH-----------HHHHHHHHcCCCcEEEEEEccc
Confidence 99999999999994 433 6999999999999999987543
No 16
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.83 E-value=3.6e-20 Score=158.36 Aligned_cols=109 Identities=21% Similarity=0.316 Sum_probs=99.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||||||+|.++..+++.+.++|+|+|+|+.+++.|++++...++.++++++++|+.++++++++||+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 67889999999999999999997767799999999999999999999888877899999999999988899999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
++|+ +... +++++.++|+|||.+++.+..
T Consensus 124 ~~~~-~~~~-----------~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 124 IYNI-GFER-----------GLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp GGGT-CHHH-----------HHHHHGGGEEEEEEEEEEEEE
T ss_pred ceec-CHHH-----------HHHHHHHHcCCCCEEEEEEee
Confidence 9999 5544 599999999999999998754
No 17
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.83 E-value=2e-20 Score=159.57 Aligned_cols=184 Identities=15% Similarity=0.120 Sum_probs=121.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc-c
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE-A 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 177 (305)
+++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. ++.++++|+..+++ +++||+|++.. +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-~~~fD~v~~~~~~ 120 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-GRRFSAVTCMFSS 120 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-SCCEEEEEECTTG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-cCCcCEEEEcCch
Confidence 45689999999999999999976 6799999999999999998742 68999999999887 68999999998 9
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCcc----ccCC-Cccccc-------------
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYL----PLDT-SHFSLS------------- 239 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~----~~~~-~~~~~~------------- 239 (305)
++|++++... ..+++++.++|+|||.+++............+.. +... ....+.
T Consensus 121 l~~~~~~~~~--------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (263)
T 3pfg_A 121 IGHLAGQAEL--------DAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEV 192 (263)
T ss_dssp GGGSCHHHHH--------HHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred hhhcCCHHHH--------HHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEE
Confidence 9999865432 1269999999999999999643222211111100 0000 000000
Q ss_pred ccccchhHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCCC
Q 042544 240 SFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQH 304 (305)
Q Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~~ 304 (305)
.+....-+.. .....+......++.+++..+++++||+++.. .+.+....+++|+||+.
T Consensus 193 ~~~~~~~~~~----~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~--~~~~~~~~~~va~K~a~ 251 (263)
T 3pfg_A 193 HYLVAGPDRG----ITHHEESHRITLFTREQYERAFTAAGLSVEFM--PGGPSGRGLFTGLPGAK 251 (263)
T ss_dssp EEEEEETTTE----EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEE--SSTTTSSCEEEEEECC-
T ss_pred EEEEecCCCc----EEEEEEEEEEEeecHHHHHHHHHHCCCEEEEe--eCCCCCceeEEEecCCC
Confidence 0000000000 00000001123456789999999999988773 34555677899999963
No 18
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.83 E-value=8.9e-20 Score=153.38 Aligned_cols=114 Identities=22% Similarity=0.411 Sum_probs=102.1
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
.+...+.+.++.+|||||||+|.++..+++. ..+|+|+|+|+.|++.+++++...+.. +++++++|+..+++++++||
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEE
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEE
Confidence 3445678889999999999999999999976 579999999999999999998877764 79999999999999889999
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++..+++|+++... +++++.++|+|||.+++.+.
T Consensus 90 ~v~~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRK-----------AVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp EEEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCchhhccCHHH-----------HHHHHHHHcCCCcEEEEEEc
Confidence 9999999999998766 69999999999999999764
No 19
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.83 E-value=1.2e-20 Score=154.67 Aligned_cols=154 Identities=14% Similarity=0.141 Sum_probs=114.7
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccc
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCH 180 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 180 (305)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++. .+++++++|+.++++++++||+|++..+++|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 779999999999999999976 789999999999999998862 3689999999998888899999999999999
Q ss_pred cCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHHHHHHHH
Q 042544 181 APDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEF 260 (305)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 260 (305)
++...... +++++.++|+|||.+++.+..... ...+.....
T Consensus 115 ~~~~~~~~---------~l~~~~~~L~pgG~l~i~~~~~~~--~~~~~~~~~---------------------------- 155 (203)
T 3h2b_A 115 MGPGELPD---------ALVALRMAVEDGGGLLMSFFSGPS--LEPMYHPVA---------------------------- 155 (203)
T ss_dssp CCTTTHHH---------HHHHHHHTEEEEEEEEEEEECCSS--CEEECCSSS----------------------------
T ss_pred CCHHHHHH---------HHHHHHHHcCCCcEEEEEEccCCc--hhhhhchhh----------------------------
Confidence 98433222 699999999999999998743321 000000000
Q ss_pred hccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 261 VGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
.....+.+++..+++++||+++....... .|...+...|+
T Consensus 156 -~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~p~~~l~~~~~ 195 (203)
T 3h2b_A 156 -TAYRWPLPELAQALETAGFQVTSSHWDPR-FPHAYLTAEAS 195 (203)
T ss_dssp -CEEECCHHHHHHHHHHTTEEEEEEEECTT-SSEEEEEEEEC
T ss_pred -hhccCCHHHHHHHHHHCCCcEEEEEecCC-Ccchhhhhhhh
Confidence 01123457899999999998877544444 44444444443
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.83 E-value=4.2e-20 Score=156.80 Aligned_cols=120 Identities=23% Similarity=0.253 Sum_probs=105.8
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
...+...+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.|++.|++++...++..+++++++|+.++++ +++
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 103 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEK 103 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSC
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCC
Confidence 3445556788899999999999999999999655789999999999999999999888887789999999999887 789
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCC
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLA 220 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~ 220 (305)
||+|++..+++|+++... +++++.++|||||.+++.+....
T Consensus 104 fD~V~~~~~~~~~~~~~~-----------~l~~~~r~LkpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 104 CDVAACVGATWIAGGFAG-----------AEELLAQSLKPGGIMLIGEPYWR 144 (256)
T ss_dssp EEEEEEESCGGGTSSSHH-----------HHHHHTTSEEEEEEEEEEEEEET
T ss_pred CCEEEECCChHhcCCHHH-----------HHHHHHHHcCCCeEEEEecCccc
Confidence 999999999999988765 69999999999999999876443
No 21
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.83 E-value=6.9e-20 Score=155.53 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=99.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.+++++...++..+++++++|+..+|+++++||+|++..
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 56788899999999999999999764569999999999999999999998887789999999999998889999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+++|+ +... +++++.++|+|||.+++.+..
T Consensus 123 ~l~~~-~~~~-----------~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 123 AIYNI-GFER-----------GMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp CSCCC-CHHH-----------HHHHHHTTEEEEEEEEEEEEE
T ss_pred hHhhc-CHHH-----------HHHHHHHHcCCCcEEEEEEee
Confidence 99999 5544 599999999999999998754
No 22
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.82 E-value=8.1e-20 Score=156.83 Aligned_cols=168 Identities=19% Similarity=0.337 Sum_probs=124.6
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
...+.....+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.+++++...+.. +++++++|+..++++++
T Consensus 26 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~ 104 (276)
T 3mgg_A 26 EKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDS 104 (276)
T ss_dssp HHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTT
T ss_pred HHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCC
Confidence 344444556678899999999999999999954 5789999999999999999998887764 79999999999998889
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhH
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVG 247 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 247 (305)
+||+|++..+++|++++.. +++++.++|+|||.+++.+.+.... ...|.. ....
T Consensus 105 ~fD~v~~~~~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~----~~~~~~-----------~~~~ 158 (276)
T 3mgg_A 105 SFDHIFVCFVLEHLQSPEE-----------ALKSLKKVLKPGGTITVIEGDHGSC----YFHPEG-----------KKAI 158 (276)
T ss_dssp CEEEEEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEECGGGC----EEESCC-----------HHHH
T ss_pred CeeEEEEechhhhcCCHHH-----------HHHHHHHHcCCCcEEEEEEcCCCCc----eECCCc-----------HHHH
Confidence 9999999999999999876 5999999999999999987433210 000110 1111
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhc
Q 042544 248 RFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAA 284 (305)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 284 (305)
.+. ..........+..+....++..+++++||..+.
T Consensus 159 ~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~ 194 (276)
T 3mgg_A 159 EAW-NCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIR 194 (276)
T ss_dssp HHH-HHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEE
T ss_pred HHH-HHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEE
Confidence 111 112222233344555556788888888887655
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.82 E-value=4.5e-20 Score=157.28 Aligned_cols=118 Identities=23% Similarity=0.315 Sum_probs=100.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
..+...+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.++++.... .+++++++|+.++++++++|
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCCcE
Confidence 345556678889999999999999999999644789999999999999999876443 57999999999999989999
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
|+|++..+++|++...... +++++.++|+|||.+++.+...
T Consensus 122 D~v~~~~~l~~~~~~~~~~---------~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNK---------LFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEEESCGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEeHHHHHHhcChHHHHH---------HHHHHHHHcCCCCEEEEEEecc
Confidence 9999999999995433322 6999999999999999987543
No 24
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.82 E-value=2e-20 Score=158.56 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATC 179 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 179 (305)
.+.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++ ..+++++++|++++|+++++||+|++..++|
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h 110 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMH 110 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCCCCSSCEEEEEECSCCT
T ss_pred CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhcccCCcccEEEEeeehh
Confidence 4579999999999999999976 6899999999999987653 2579999999999999999999999999998
Q ss_pred ccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 180 HAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
|++ ... +++++.|+|||||.+++....
T Consensus 111 ~~~-~~~-----------~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 111 WFD-LDR-----------FWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp TCC-HHH-----------HHHHHHHHEEEEEEEEEEEEC
T ss_pred Hhh-HHH-----------HHHHHHHHcCCCCEEEEEECC
Confidence 875 433 599999999999999887643
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.82 E-value=5e-20 Score=154.95 Aligned_cols=103 Identities=27% Similarity=0.452 Sum_probs=92.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
+++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++. ...+++++++|+..+++++++||+|++..++
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 126 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINSL 126 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESCT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcChH
Confidence 47789999999999999999976 789999999999999998764 2357999999999999888999999999999
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++++.. +++++.++|+|||.+++.+.
T Consensus 127 ~~~~~~~~-----------~l~~~~~~L~pgG~l~i~~~ 154 (242)
T 3l8d_A 127 EWTEEPLR-----------ALNEIKRVLKSDGYACIAIL 154 (242)
T ss_dssp TSSSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred hhccCHHH-----------HHHHHHHHhCCCeEEEEEEc
Confidence 99998866 59999999999999999874
No 26
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.82 E-value=1.7e-19 Score=146.92 Aligned_cols=112 Identities=17% Similarity=0.244 Sum_probs=96.1
Q ss_pred HHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 94 LQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
..+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+.. +++++++|+..+++ +++||+|+
T Consensus 26 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-~~~~D~v~ 102 (199)
T 2xvm_A 26 EAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-DRQYDFIL 102 (199)
T ss_dssp HHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-CCCEEEEE
T ss_pred HHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-CCCceEEE
Confidence 3455567789999999999999999976 789999999999999999998877663 69999999998887 78999999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+..+++|++...... +++++.++|+|||.+++.+.
T Consensus 103 ~~~~l~~~~~~~~~~---------~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 103 STVVLMFLEAKTIPG---------LIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp EESCGGGSCGGGHHH---------HHHHHHHTEEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHH---------HHHHHHHhcCCCeEEEEEEe
Confidence 999999998443322 69999999999999888664
No 27
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.81 E-value=1.1e-19 Score=149.91 Aligned_cols=103 Identities=20% Similarity=0.261 Sum_probs=89.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
.++++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++. ++.++++|+..++ ++++||+|++..
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~ 110 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHA 110 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECS
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecC
Confidence 3567889999999999999999976 789999999999999999875 3678899999888 678999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++|++...... +++++.++|+|||.+++...
T Consensus 111 ~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~ 142 (211)
T 3e23_A 111 CLLHVPRDELAD---------VLKLIWRALKPGGLFYASYK 142 (211)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEE
T ss_pred chhhcCHHHHHH---------HHHHHHHhcCCCcEEEEEEc
Confidence 999998443322 69999999999999999764
No 28
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.81 E-value=5.1e-20 Score=151.04 Aligned_cols=113 Identities=17% Similarity=0.126 Sum_probs=93.0
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC-----------CCCCeEEEEcCCCCCC
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG-----------VDKTCNFVKADFMKMP 163 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-----------~~~~~~~~~~d~~~~~ 163 (305)
.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++..... ...+++++++|+.+++
T Consensus 17 ~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 17 SLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp HHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred hcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 345678899999999999999999986 7899999999999999998754210 1247999999999988
Q ss_pred CCC-CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 164 FPD-NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 164 ~~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++ ++||+|++..+++|++...... +++++.++|||||.+++...
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~~~~~~~---------~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALPADMRER---------YVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSCHHHHHH---------HHHHHHHHSCSEEEEEEEEE
T ss_pred cccCCCEEEEEECcchhhCCHHHHHH---------HHHHHHHHcCCCcEEEEEEE
Confidence 765 7899999999999998654432 69999999999998555443
No 29
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.81 E-value=2.1e-19 Score=159.75 Aligned_cols=179 Identities=11% Similarity=0.117 Sum_probs=133.1
Q ss_pred HHHHcCCCC-CCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCC
Q 042544 92 LALQLGLKS-GQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNS 168 (305)
Q Consensus 92 l~~~~~~~~-~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~ 168 (305)
+...++..+ +.+|||||||+|.++..+++ .++.+++++|+ +.+++.+++++...+..++++++.+|+.+.+ +.++.
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 248 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGA 248 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCC
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCC
Confidence 334445556 78999999999999999995 56789999999 8899999999888887778999999998865 13466
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHH
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGR 248 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (305)
||+|++..++||+++..... ++++++++|+|||.+++.+.........++ ...
T Consensus 249 ~D~v~~~~vlh~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~------------------~~~ 301 (352)
T 3mcz_A 249 ADVVMLNDCLHYFDAREARE---------VIGHAAGLVKPGGALLILTMTMNDDRVTPA------------------LSA 301 (352)
T ss_dssp EEEEEEESCGGGSCHHHHHH---------HHHHHHHTEEEEEEEEEEEECCCTTSSSSH------------------HHH
T ss_pred ccEEEEecccccCCHHHHHH---------HHHHHHHHcCCCCEEEEEEeccCCCCCCCc------------------hHH
Confidence 99999999999999875433 699999999999999998865442211111 111
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCCC
Q 042544 249 FVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQH 304 (305)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~~ 304 (305)
+..... ......-...+.+++..+++++||.++.. ...+..+++||||.+
T Consensus 302 ~~~~~~--~~~~~~~~~~t~~e~~~ll~~aGf~~~~~----~~g~~~l~~a~kp~~ 351 (352)
T 3mcz_A 302 DFSLHM--MVNTNHGELHPTPWIAGVVRDAGLAVGER----SIGRYTLLIGQRSSG 351 (352)
T ss_dssp HHHHHH--HHHSTTCCCCCHHHHHHHHHHTTCEEEEE----EETTEEEEEEECCCC
T ss_pred HhhHHH--HhhCCCCCcCCHHHHHHHHHHCCCceeee----ccCceEEEEEecCCC
Confidence 111111 11111233456789999999999998872 245678999999975
No 30
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.80 E-value=6.4e-20 Score=152.49 Aligned_cols=172 Identities=16% Similarity=0.142 Sum_probs=114.2
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC---CCCC-CCeeE
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM---PFPD-NSFDA 171 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~-~~fD~ 171 (305)
+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ .++.+.++|+.++ ++.. ++||+
T Consensus 48 ~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 48 ILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp HHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred hhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccE
Confidence 33346689999999999999999976 78999999999999999885 3577888888765 5444 45999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHH
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVT 251 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 251 (305)
|++..+++ .++... +++++.++|+|||.+++.+.........+........ .+..+...
T Consensus 120 v~~~~~l~-~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------- 178 (227)
T 3e8s_A 120 ICANFALL-HQDIIE-----------LLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREE--SFAGFAGD------- 178 (227)
T ss_dssp EEEESCCC-SSCCHH-----------HHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEE--CCTTSSSC-------
T ss_pred EEECchhh-hhhHHH-----------HHHHHHHHhCCCeEEEEEecCccccCccccccccchh--hhhccccC-------
Confidence 99999999 666654 6999999999999999987543321111100000000 00000000
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccc----cccceEEEEEcC
Q 042544 252 RNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEI----FTPMYFFLARKP 302 (305)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~arKp 302 (305)
.........+.+++..+++++||.++....... .....++++|||
T Consensus 179 ------~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 179 ------WQPMPWYFRTLASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp ------CCCEEEEECCHHHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred ------cccceEEEecHHHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 000001113457899999999998876322111 123568899987
No 31
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.80 E-value=1.4e-19 Score=162.69 Aligned_cols=109 Identities=19% Similarity=0.300 Sum_probs=95.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhc-----C-C-CCCeEEEEcCCCCC------
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFA-----G-V-DKTCNFVKADFMKM------ 162 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-----~-~-~~~~~~~~~d~~~~------ 162 (305)
+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.|++++... | . ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999964 5679999999999999999987654 2 2 25799999999987
Q ss_pred CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 163 PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 163 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++++++||+|++..+++|++++.. +++++.++|||||.+++.+.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~-----------~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLA-----------LFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCCCHHH-----------HHHHHHHHcCCCCEEEEEEe
Confidence 888899999999999999998866 69999999999999999864
No 32
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.80 E-value=1.2e-19 Score=152.78 Aligned_cols=158 Identities=18% Similarity=0.205 Sum_probs=114.4
Q ss_pred HhhHHHHHHHHHhhhHHHHHhhcCCccccccCCCCccHHHHHHHHHHHHHHHcC----CCCCCeEEEEcCCCChHHHHHH
Q 042544 44 KANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLRESIKRHEHFLALQLG----LKSGQKVLDVGCGIGGPLREIA 119 (305)
Q Consensus 44 ~~~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~ 119 (305)
.+.+++...++||.....|+..+++. .. .-.........++...+. ..++.+|||||||+|.++..++
T Consensus 27 ~~~~~~~~~~~w~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~ 98 (241)
T 2ex4_A 27 EKQFYSKAKTYWKQIPPTVDGMLGGY-------GH-ISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLL 98 (241)
T ss_dssp HHHHHHHHHHHHHTSCSSHHHHTTTC-------GG-GHHHHHHHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTT
T ss_pred cchhHHHHHHHHhcCCccccccccCC-------CC-cchhhHHhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHH
Confidence 34556667888887665555433211 00 001111122223333222 3357899999999999999988
Q ss_pred hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccH
Q 042544 120 QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRST 199 (305)
Q Consensus 120 ~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l 199 (305)
+....+|+|+|+|+.+++.|+++....+ ..++.++++|+..+++++++||+|++..+++|++++.... ++
T Consensus 99 ~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~---------~l 168 (241)
T 2ex4_A 99 LPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAE---------FL 168 (241)
T ss_dssp TTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHH---------HH
T ss_pred HhcCCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHH---------HH
Confidence 6546799999999999999999876653 2368999999998888888999999999999999865322 69
Q ss_pred HHHHHHHHhCCceEEEeccC
Q 042544 200 RKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 200 ~~~~~~L~~gG~~~i~~~~~ 219 (305)
+++.++|+|||.+++.+...
T Consensus 169 ~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 169 RRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp HHHHHHEEEEEEEEEEEEEB
T ss_pred HHHHHhcCCCeEEEEEEccC
Confidence 99999999999999987543
No 33
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.80 E-value=2.3e-19 Score=150.99 Aligned_cols=106 Identities=14% Similarity=0.190 Sum_probs=91.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc-cc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE-AT 178 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 178 (305)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++....+. ++.++++|+..++++ ++||+|++.. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCccc
Confidence 6789999999999999999976 78999999999999999999877654 689999999988876 8899999998 99
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++++... ..+++++.++|+|||.+++...
T Consensus 113 ~~~~~~~~~--------~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 113 NYIIDSDDL--------KKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCSHHHH--------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCHHHH--------HHHHHHHHHhcCCCcEEEEEec
Confidence 999653321 1269999999999999998654
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.80 E-value=5.7e-19 Score=149.51 Aligned_cols=151 Identities=16% Similarity=0.164 Sum_probs=114.0
Q ss_pred hHHHHHHHHHhhhHHHHHhhcCCccccccCCCCccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCe
Q 042544 46 NYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTS 125 (305)
Q Consensus 46 ~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~ 125 (305)
.|++...++|+.....++...+... .+..........+...+...++.+|||||||+|.++..++.....+
T Consensus 48 ~~~~~~~~~w~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~ 118 (254)
T 1xtp_A 48 GWYGKALEYWRTVPATVSGVLGGMD---------HVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYAT 118 (254)
T ss_dssp CHHHHHHHHHHTSCSSHHHHTTTCG---------GGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSE
T ss_pred hhhhhhhhHHhcCCccccceecCcC---------ccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCE
Confidence 3556777888876555544322111 1112222233444455666778999999999999999998654578
Q ss_pred EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHH
Q 042544 126 VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEA 205 (305)
Q Consensus 126 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 205 (305)
|+|+|+|+.+++.++++.... .+++++++|+..+++++++||+|++..+++|+++..... +++++.++
T Consensus 119 v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~---------~l~~~~~~ 186 (254)
T 1xtp_A 119 TDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVK---------FFKHCQQA 186 (254)
T ss_dssp EEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHH---------HHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHH---------HHHHHHHh
Confidence 999999999999999986543 479999999999888889999999999999997644322 69999999
Q ss_pred HHhCCceEEEec
Q 042544 206 LKQAGFEVIWEK 217 (305)
Q Consensus 206 L~~gG~~~i~~~ 217 (305)
|+|||.+++.+.
T Consensus 187 LkpgG~l~i~~~ 198 (254)
T 1xtp_A 187 LTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCeEEEEEec
Confidence 999999999874
No 35
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=2.4e-19 Score=152.74 Aligned_cols=110 Identities=20% Similarity=0.244 Sum_probs=95.9
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+.+...+++.++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.++++ .+++++++|+.++++++++
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~-------~~~~~~~~d~~~~~~~~~~ 94 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVH-------PQVEWFTGYAENLALPDKS 94 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCC-------TTEEEECCCTTSCCSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhc-------cCCEEEECchhhCCCCCCC
Confidence 34455566777889999999999999999997 589999999999999876553 2799999999999998899
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
||+|++..+++|+++... +++++.++|| ||.+++.+..
T Consensus 95 fD~v~~~~~l~~~~~~~~-----------~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 95 VDGVISILAIHHFSHLEK-----------SFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp BSEEEEESCGGGCSSHHH-----------HHHHHHHHBC-SSCEEEEEEC
T ss_pred EeEEEEcchHhhccCHHH-----------HHHHHHHHhC-CcEEEEEEcC
Confidence 999999999999988876 5999999999 9988887753
No 36
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.80 E-value=1.7e-18 Score=152.82 Aligned_cols=179 Identities=16% Similarity=0.100 Sum_probs=130.6
Q ss_pred HHHHHcCC--CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 91 FLALQLGL--KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 91 ~l~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
.+...++. .++.+|||+|||+|.++..+++. ++.+++++|+| .+++.|++++...++.++++++++|+.+.+++++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 34444555 67889999999999999999954 67899999999 9999999998888777789999999988777654
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhH
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVG 247 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 247 (305)
||+|++.++++|++++.... +++++.++|+|||.+++.+.........+ ...
T Consensus 233 -~D~v~~~~~l~~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~~~------------------~~~ 284 (335)
T 2r3s_A 233 -YDLVLLPNFLHHFDVATCEQ---------LLRKIKTALAVEGKVIVFDFIPNSDRITP------------------PDA 284 (335)
T ss_dssp -EEEEEEESCGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEECCCCTTSSCS------------------HHH
T ss_pred -CcEEEEcchhccCCHHHHHH---------HHHHHHHhCCCCcEEEEEeecCCCCcCCc------------------hHH
Confidence 99999999999998775433 69999999999999999875433211000 111
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 248 RFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
.+...... .........+.+++..+++++||..+... ....+..++++++|
T Consensus 285 ~~~~~~~~--~~~~~~~~~t~~~~~~ll~~aGf~~~~~~--~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 285 AAFSLVML--ATTPNGDAYTFAEYESMFSNAGFSHSQLH--SLPTTQQQVIVAYK 335 (335)
T ss_dssp HHHHHHHH--HHSSSCCCCCHHHHHHHHHHTTCSEEEEE--CCTTSSSEEEEEEC
T ss_pred HHHHHHHH--eeCCCCCcCCHHHHHHHHHHCCCCeeeEE--ECCCCceeEEEecC
Confidence 11111111 01112344567899999999999887733 33345567888876
No 37
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.79 E-value=3.5e-19 Score=149.39 Aligned_cols=115 Identities=17% Similarity=0.239 Sum_probs=91.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 042544 87 RHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD 166 (305)
Q Consensus 87 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (305)
...+.+...+ .++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++. .++.++++|+..+++ +
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-S
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-C
Confidence 3334444443 56789999999999999999975 459999999999999998863 358999999998877 6
Q ss_pred CCeeEEEec-ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 167 NSFDAVYAI-EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 167 ~~fD~v~~~-~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
++||+|+|. .+++|++++... ..+++++.++|+|||.+++.+...
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~--------~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEEL--------GAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHH--------HHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCCcEEEEcCchHhhcCCHHHH--------HHHHHHHHHhcCCCeEEEEEeccC
Confidence 789999964 489999764322 126999999999999999976443
No 38
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.79 E-value=2.3e-18 Score=147.66 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=106.8
Q ss_pred ccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHH------HHHHHHHHHHhcCCCC
Q 042544 79 ESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEY------QITRGKELNRFAGVDK 150 (305)
Q Consensus 79 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~------~l~~a~~~~~~~~~~~ 150 (305)
..+..++......+...+.+.++.+|||||||+|.++..+++. +..+|+|+|+|+. +++.|++++...++..
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 3455666666777777888889999999999999999999965 3389999999997 9999999988877766
Q ss_pred CeEEEEcC---CCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 151 TCNFVKAD---FMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 151 ~~~~~~~d---~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
+++++++| ...+|+++++||+|++..+++|++++.. +++.+.++++|||.+++.+...
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~-----------~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANA-----------LALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHH-----------HHHHHHHHTTTCSEEEEEEECS
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHH-----------HHHHHHHHhCCCCEEEEEEecC
Confidence 89999998 4445677889999999999999998865 3666666666799999987544
No 39
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.79 E-value=2.1e-18 Score=152.07 Aligned_cols=166 Identities=17% Similarity=0.173 Sum_probs=125.2
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
++..+..+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++.++++++.+|+. .+++. +||+|++
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~ 241 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVL 241 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEE
Confidence 3445678999999999999999984 57789999999 9999999999988888788999999997 35554 7999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHH
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNM 254 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 254 (305)
.+++||++++...+ ++++++++|+|||.+++.+...... . +. .......
T Consensus 242 ~~vlh~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~--~----~~----------------~~~d~~~ 290 (332)
T 3i53_A 242 SAVLHDWDDLSAVA---------ILRRCAEAAGSGGVVLVIEAVAGDE--H----AG----------------TGMDLRM 290 (332)
T ss_dssp ESCGGGSCHHHHHH---------HHHHHHHHHTTTCEEEEEECCCC---------CC----------------HHHHHHH
T ss_pred ehhhccCCHHHHHH---------HHHHHHHhcCCCCEEEEEeecCCCC--C----cc----------------HHHHHHH
Confidence 99999999975533 6999999999999999988544321 1 10 0111111
Q ss_pred HHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 255 VKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
.....-...+.+++..+++++||.++...... . ..++.+||
T Consensus 291 ---~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~--~-~~vie~r~ 331 (332)
T 3i53_A 291 ---LTYFGGKERSLAELGELAAQAGLAVRAAHPIS--Y-VSIVEMTA 331 (332)
T ss_dssp ---HHHHSCCCCCHHHHHHHHHHTTEEEEEEEECS--S-SEEEEEEE
T ss_pred ---HhhCCCCCCCHHHHHHHHHHCCCEEEEEEECC--C-cEEEEEee
Confidence 11123344567899999999999887744332 2 66777765
No 40
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.79 E-value=1.4e-18 Score=147.80 Aligned_cols=105 Identities=21% Similarity=0.257 Sum_probs=94.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.+++++ .+...++.++++|+..+++++++||+|++..
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECC
Confidence 5677889999999999999999976 789999999999999999987 2234579999999999988889999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+++|+++... +++++.++|+|||.+++.
T Consensus 113 ~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPDWPK-----------VLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CGGGCTTHHH-----------HHHHHHHHEEEEEEEEEE
T ss_pred chhhcCCHHH-----------HHHHHHHHCCCCcEEEEE
Confidence 9999998765 599999999999999886
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.78 E-value=1.2e-18 Score=150.33 Aligned_cols=109 Identities=17% Similarity=0.329 Sum_probs=96.2
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
..+.++.+|||||||+|.++..+++. + +.+|+|+|+|+.+++.|++++...+. +++++++|+.+++++ ++||+|+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~fD~v~ 94 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELN-DKYDIAI 94 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCS-SCEEEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcC-CCeeEEE
Confidence 35678899999999999999999954 4 48999999999999999998876543 799999999998874 6899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+..+++|+++... +++++.++|+|||.+++.+.+
T Consensus 95 ~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 95 CHAFLLHMTTPET-----------MLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EESCGGGCSSHHH-----------HHHHHHHTEEEEEEEEEEECC
T ss_pred ECChhhcCCCHHH-----------HHHHHHHHcCCCCEEEEEecc
Confidence 9999999999866 699999999999999998743
No 42
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.78 E-value=4.4e-19 Score=141.08 Aligned_cols=104 Identities=19% Similarity=0.198 Sum_probs=90.3
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
.+.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.++++ .++++++++| .++++++||+|++
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK------FDSVITLSDP---KEIPDNSVDFILF 81 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH------CTTSEEESSG---GGSCTTCEEEEEE
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCCCCCceEEEEE
Confidence 3456678899999999999999999764 4999999999999999887 2478999999 5677889999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
..+++|+++... +++++.++|+|||.+++.+...
T Consensus 82 ~~~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 82 ANSFHDMDDKQH-----------VISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp ESCSTTCSCHHH-----------HHHHHHHHEEEEEEEEEEEECS
T ss_pred ccchhcccCHHH-----------HHHHHHHhcCCCCEEEEEEcCc
Confidence 999999988765 6999999999999999987543
No 43
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.78 E-value=1.9e-18 Score=148.63 Aligned_cols=105 Identities=27% Similarity=0.334 Sum_probs=93.4
Q ss_pred HHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 94 LQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
..+.+.++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.++++. .++.++++|+..+++ +++||+|+
T Consensus 51 ~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~~~fD~v~ 122 (279)
T 3ccf_A 51 QLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-DKPLDAVF 122 (279)
T ss_dssp HHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC-SSCEEEEE
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc-CCCcCEEE
Confidence 345667889999999999999999998 5889999999999999998864 468999999999887 57899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+..+++|++++.. +++++.++|+|||.+++...
T Consensus 123 ~~~~l~~~~d~~~-----------~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 123 SNAMLHWVKEPEA-----------AIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhhCcCHHH-----------HHHHHHHhcCCCcEEEEEec
Confidence 9999999998866 59999999999999998764
No 44
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=2.3e-18 Score=142.25 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=93.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++ .+. .+++++++|+.++ +++++||+|++..
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~ 115 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAH 115 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEES
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEec
Confidence 3667789999999999999999976 7899999999999999887 233 4799999999987 6789999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
+++|++++.... +++++.++|+|||.+++.+...
T Consensus 116 ~l~~~~~~~~~~---------~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 116 WLAHVPDDRFEA---------FWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEECC
T ss_pred hhhcCCHHHHHH---------HHHHHHHHcCCCeEEEEEeCCC
Confidence 999999864322 6999999999999999987544
No 45
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.78 E-value=3e-18 Score=152.66 Aligned_cols=174 Identities=22% Similarity=0.219 Sum_probs=130.3
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
..+...++..++.+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...+..++++++.+|+.+.++++.
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 257 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA- 257 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC-
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC-
Confidence 3455566777889999999999999999995 46789999999 99999999999888877789999999998776543
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHH
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGR 248 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (305)
|+|++..+++|+++..... +++++.++|+|||.+++.+...... ..++ ...
T Consensus 258 -D~v~~~~vlh~~~d~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~------------------~~~ 308 (359)
T 1x19_A 258 -DAVLFCRILYSANEQLSTI---------MCKKAFDAMRSGGRLLILDMVIDDP-ENPN------------------FDY 308 (359)
T ss_dssp -SEEEEESCGGGSCHHHHHH---------HHHHHHTTCCTTCEEEEEEECCCCT-TSCC------------------HHH
T ss_pred -CEEEEechhccCCHHHHHH---------HHHHHHHhcCCCCEEEEEecccCCC-CCch------------------HHH
Confidence 9999999999999854433 6999999999999999987544321 1110 001
Q ss_pred HHHHHHHHHHHHhc-cCC----CchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 249 FVTRNMVKALEFVG-LAP----KGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
+. .. +...+ -.. .+.+++..+++++||.++...... ...++.|+||
T Consensus 309 ~~--~~---~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~~~---~~~vi~a~kp 359 (359)
T 1x19_A 309 LS--HY---ILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVRKY---DHLLVQAVKP 359 (359)
T ss_dssp HH--HH---GGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEEET---TEEEEEEECC
T ss_pred HH--HH---HHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEecC---CceEEEEeCC
Confidence 11 10 00011 112 566899999999999887744322 5678999997
No 46
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=1.2e-18 Score=144.03 Aligned_cols=117 Identities=18% Similarity=0.273 Sum_probs=98.7
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 042544 87 RHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD 166 (305)
Q Consensus 87 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (305)
.....+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++.... .+++++++|+.+++ ++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCC-CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCC-CC
Confidence 33445555667778889999999999999999976 579999999999999999987653 37999999999987 67
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++..+++|++++... ..+++++.++|+|||.+++.+
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~--------~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQM--------RTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHH--------HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHH--------HHHHHHHHHHcCCCCEEEEEe
Confidence 899999999999999987432 126999999999999999876
No 47
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.78 E-value=7.4e-19 Score=148.67 Aligned_cols=111 Identities=15% Similarity=0.130 Sum_probs=91.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHh----------c------CCCCCeEEEEcCCC
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRF----------A------GVDKTCNFVKADFM 160 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~----------~------~~~~~~~~~~~d~~ 160 (305)
.+.++.+|||+|||+|..+..|++. +.+|+|+|+|+.|++.|+++... . ....+++++++|+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3457789999999999999999986 78999999999999999876531 0 01247999999999
Q ss_pred CCCCCC-CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 161 KMPFPD-NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 161 ~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++++++ ++||+|++..++++++...... +++++.++|||||.+++.+.
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~---------~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDR---------YADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHH---------HHHHHHHTEEEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHH---------HHHHHHHHcCCCeEEEEEEE
Confidence 988754 8999999999999998654432 69999999999999976543
No 48
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.78 E-value=6.7e-19 Score=145.74 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=96.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCC----CeEEEEcCCCCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDK----TCNFVKADFMKMPFP 165 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~ 165 (305)
++...+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|++++...++.. +++++++|+...+.+
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR 99 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc
Confidence 3444444457789999999999999999964 34799999999999999999987766543 799999999877777
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++||+|++..+++|++++.... +++++.++|+|||.+++..
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~---------~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 100 FHGYDAATVIEVIEHLDLSRLGA---------FERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp GCSCSEEEEESCGGGCCHHHHHH---------HHHHHHTTTCCSEEEEEEE
T ss_pred CCCcCEEeeHHHHHcCCHHHHHH---------HHHHHHHHcCCCEEEEEcc
Confidence 78999999999999998774332 6999999999999666643
No 49
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.77 E-value=8.8e-19 Score=146.83 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=93.3
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAI 175 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 175 (305)
..+++ .+|||||||+|.++..++.. +.+|+|+|+|+.+++.|+++....+...+++++++|+.+++ ++++||+|++.
T Consensus 63 ~~~~~-~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~ 139 (235)
T 3lcc_A 63 SSLPL-GRALVPGCGGGHDVVAMASP-ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDY 139 (235)
T ss_dssp TCSCC-EEEEEETCTTCHHHHHHCBT-TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEE
T ss_pred cCCCC-CCEEEeCCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEC
Confidence 34444 59999999999999999874 78999999999999999998876544557999999999876 45689999999
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
.+++|++...... +++++.++|+|||.+++.+...
T Consensus 140 ~~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 140 VFFCAIEPEMRPA---------WAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp SSTTTSCGGGHHH---------HHHHHHHHEEEEEEEEEEECCC
T ss_pred hhhhcCCHHHHHH---------HHHHHHHHCCCCcEEEEEEecc
Confidence 9999998443322 6999999999999999876443
No 50
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.77 E-value=7.7e-19 Score=145.55 Aligned_cols=116 Identities=18% Similarity=0.204 Sum_probs=95.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCC----CeEEEEcCCCCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDK----TCNFVKADFMKMPFP 165 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~d~~~~~~~ 165 (305)
++...+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...++.. +++++++|+...+++
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 99 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR 99 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc
Confidence 3334444457789999999999999999964 34799999999999999999987666543 799999999888777
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+++||+|++..+++|++++.... +++++.++|+|||++++.
T Consensus 100 ~~~fD~V~~~~~l~~~~~~~~~~---------~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 100 FSGYDAATVIEVIEHLDENRLQA---------FEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp GTTCSEEEEESCGGGCCHHHHHH---------HHHHHHTTTCCSEEEEEE
T ss_pred cCCCCEEEEHHHHHhCCHHHHHH---------HHHHHHHhhCCCEEEEEc
Confidence 78999999999999998774322 699999999999955554
No 51
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.77 E-value=1.1e-17 Score=149.60 Aligned_cols=177 Identities=19% Similarity=0.225 Sum_probs=132.7
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
..+...++..++.+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++.++++++.+|+. .+++. .
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~ 268 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-G 268 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-S
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-C
Confidence 4455566777889999999999999999995 46789999999 9999999999988888788999999998 46665 7
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHH
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGR 248 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (305)
||+|++.+++++++++.... ++++++++|+|||.+++.+....... . .. ..
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~---------~L~~~~~~L~pgG~l~i~e~~~~~~~-~------------------~~-~~ 319 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVR---------ILRRIATAMKPDSRLLVIDNLIDERP-A------------------AS-TL 319 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHH---------HHHHHHTTCCTTCEEEEEEEBCCSSC-C------------------HH-HH
T ss_pred ceEEEhhhhhccCCHHHHHH---------HHHHHHHHcCCCCEEEEEEeccCCCC-C------------------Cc-hh
Confidence 99999999999999887533 69999999999999999885443210 0 00 11
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 249 FVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
+..... +...+-...+.+++..+++++||.++..... ...+..++.++|.
T Consensus 320 ~~d~~~---~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~svie~~~a 369 (369)
T 3gwz_A 320 FVDLLL---LVLVGGAERSESEFAALLEKSGLRVERSLPC-GAGPVRIVEIRRA 369 (369)
T ss_dssp HHHHHH---HHHHSCCCBCHHHHHHHHHTTTEEEEEEEEC-SSSSEEEEEEEEC
T ss_pred HhhHHH---HhhcCCccCCHHHHHHHHHHCCCeEEEEEEC-CCCCcEEEEEEeC
Confidence 111111 1112334556789999999999998874321 2344567777763
No 52
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.77 E-value=4.2e-18 Score=151.87 Aligned_cols=159 Identities=15% Similarity=0.099 Sum_probs=117.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~ 175 (305)
.+..+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++.++++++.+|+.+. |++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 3567999999999999999984 57889999999 999999999988777767899999999885 566 789999999
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHHH
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMV 255 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 255 (305)
.++++++++.... ++++++++|+|||.+++.+........ ...... .......
T Consensus 256 ~vlh~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~-----------------~~~~~~-~~~~~~~ 308 (363)
T 3dp7_A 256 QFLDCFSEEEVIS---------ILTRVAQSIGKDSKVYIMETLWDRQRY-----------------ETASYC-LTQISLY 308 (363)
T ss_dssp SCSTTSCHHHHHH---------HHHHHHHHCCTTCEEEEEECCTTSCSS-----------------HHHHHH-HHHHHHH
T ss_pred chhhhCCHHHHHH---------HHHHHHHhcCCCcEEEEEeeccCCccc-----------------cchhhH-HHHhhhh
Confidence 9999999886543 699999999999999998754331100 000000 0000000
Q ss_pred -HHHHHhccCCCchHHHHHHHHHHHHHHhcCC
Q 042544 256 -KALEFVGLAPKGSQRVQDFLEKAAEGLAAGG 286 (305)
Q Consensus 256 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (305)
...........+.+++..+++++||.++...
T Consensus 309 ~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 309 FTAMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp HHHSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred HHhhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 0001111234467899999999999988744
No 53
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=2.7e-18 Score=148.76 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=94.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-CCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-PDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~v~~~~ 176 (305)
+.++.+|||||||+|.++..+++....+|+|+|+|+.+++.|+++....+...++.++++|+...++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 4678899999999999999988764569999999999999999998877766679999999998887 578999999999
Q ss_pred ccccc--CChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 177 ATCHA--PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 177 ~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+++|. ...... .+++++.++|+|||.+++...+
T Consensus 142 ~l~~~~~~~~~~~---------~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLD---------IAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHH---------HHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHH---------HHHHHHHHhcCCCCEEEEEECC
Confidence 99873 222221 2699999999999999998754
No 54
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.77 E-value=7.9e-18 Score=149.46 Aligned_cols=177 Identities=18% Similarity=0.142 Sum_probs=130.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHH-hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIA-QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
.+....+..+..+|||||||+|.++..++ ++|+.+++..|. |.+++.|++++...+ .++++++.+|+...|.+ .+
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~~--~~ 245 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPLP--EA 245 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCCC--CC
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCCC--Cc
Confidence 34444566677899999999999999999 568899999998 889999998876544 56899999999876554 47
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
|+|++..++|++++++... +++++++.|+|||.++|.+..+......|+ ...+
T Consensus 246 D~~~~~~vlh~~~d~~~~~---------iL~~~~~al~pgg~lli~e~~~~~~~~~~~------------------~~~~ 298 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSH---------LLERIYHTCKPGGGILVIESLLDEDRRGPL------------------LTQL 298 (353)
T ss_dssp SEEEEESSGGGSCHHHHHH---------HHHHHHHHCCTTCEEEEEECCCCTTSCCCH------------------HHHH
T ss_pred eEEEeeeecccCCHHHHHH---------HHHHHHhhCCCCCEEEEEEeeeCCCCCCCH------------------HHHH
Confidence 9999999999999987654 699999999999999998865543222221 1111
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcCC
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp~ 303 (305)
+...+ +-..+-...+.+++..+++++||..++..+ .-.+..+++|||..
T Consensus 299 ~dl~m---l~~~~g~ert~~e~~~ll~~AGf~~v~v~~--~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 299 YSLNM---LVQTEGQERTPTHYHMLLSSAGFRDFQFKK--TGAIYDAILARKGT 347 (353)
T ss_dssp HHHHH---HHSSSCCCCCHHHHHHHHHHHTCEEEEEEC--CSSSCEEEEEECCC
T ss_pred HHHHH---HHhCCCcCCCHHHHHHHHHHCCCceEEEEE--cCCceEEEEEEecC
Confidence 11111 111223445678999999999999887443 33456789999975
No 55
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.77 E-value=2.9e-19 Score=152.41 Aligned_cols=168 Identities=16% Similarity=0.020 Sum_probs=113.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC----------------------------
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV---------------------------- 148 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---------------------------- 148 (305)
+..++.+|||||||+|.++..++.....+|+|+|+|+.|++.|++++.....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999888776654224799999999999999987654210
Q ss_pred CCCeE-EEEcCCCC-CCC---CCCCeeEEEeccccccc-CChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCC
Q 042544 149 DKTCN-FVKADFMK-MPF---PDNSFDAVYAIEATCHA-PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPD 222 (305)
Q Consensus 149 ~~~~~-~~~~d~~~-~~~---~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~ 222 (305)
..++. ++++|+.. .|+ .+++||+|+++.+++|+ ++.... ..++++++++|||||.+++....-
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~--------~~~l~~i~r~LKPGG~li~~~~~~--- 200 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAY--------RAALCNLASLLKPGGHLVTTVTLR--- 200 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHH--------HHHHHHHHTTEEEEEEEEEEEESS---
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHH--------HHHHHHHHHHcCCCcEEEEEEeec---
Confidence 01233 88999987 343 25789999999999996 332211 126999999999999999976311
Q ss_pred CCCCCccccCCCcccccccccchhHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCccc--------ccccc
Q 042544 223 SPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKE--------IFTPM 294 (305)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~ 294 (305)
..++..... .....+.+.+++...+.++||.++...... .+.+.
T Consensus 201 --~~~~~~g~~--------------------------~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~ 252 (263)
T 2a14_A 201 --LPSYMVGKR--------------------------EFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGV 252 (263)
T ss_dssp --CCEEEETTE--------------------------EEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCE
T ss_pred --CccceeCCe--------------------------EeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCce
Confidence 011100000 011123566789999999999876532211 12356
Q ss_pred eEEEEEcCC
Q 042544 295 YFFLARKPQ 303 (305)
Q Consensus 295 ~~~~arKp~ 303 (305)
++++|||+.
T Consensus 253 ~~~~a~K~~ 261 (263)
T 2a14_A 253 CCIVARKKP 261 (263)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 789999985
No 56
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.77 E-value=2e-18 Score=146.25 Aligned_cols=111 Identities=19% Similarity=0.237 Sum_probs=96.4
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeE
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDA 171 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 171 (305)
+...+...++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++.. ..+++++++|+..+++++++||+
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~fD~ 111 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAYNV 111 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCEEE
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCeEE
Confidence 34455556789999999999999999997633499999999999999998754 35799999999999988899999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|++..+++|+++... +++++.++|+|||.+++...
T Consensus 112 v~~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 112 VLSSLALHYIASFDD-----------ICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EEEchhhhhhhhHHH-----------HHHHHHHHcCCCcEEEEEeC
Confidence 999999999988766 69999999999999999753
No 57
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=2.4e-18 Score=142.69 Aligned_cols=93 Identities=17% Similarity=0.312 Sum_probs=83.8
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccc
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCH 180 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 180 (305)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ +++++++|+..+++++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999988753 9999999999998874 478999999998888889999999999999
Q ss_pred cCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 181 APDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++++.. +++++.++|+|||.+++.+.
T Consensus 115 ~~~~~~-----------~l~~~~~~L~pgG~l~i~~~ 140 (219)
T 1vlm_A 115 VDDPER-----------ALKEAYRILKKGGYLIVGIV 140 (219)
T ss_dssp SSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred ccCHHH-----------HHHHHHHHcCCCcEEEEEEe
Confidence 988765 59999999999999999764
No 58
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.76 E-value=5.1e-18 Score=151.23 Aligned_cols=180 Identities=22% Similarity=0.269 Sum_probs=129.2
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
+...+++.++.+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++.++++++++|+.+ +++. .||
T Consensus 175 l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D 251 (360)
T 1tw3_A 175 PAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KAD 251 (360)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEE
T ss_pred HHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-Ccc
Confidence 34456677889999999999999999985 45789999999 99999999999888877789999999976 4444 499
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc-CCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD-LAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
+|++..+++|+++..... +++++.++|+|||.+++.+.. .+... . .....+
T Consensus 252 ~v~~~~vl~~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~---------~----------~~~~~~ 303 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVR---------ILTRCAEALEPGGRILIHERDDLHENS---------F----------NEQFTE 303 (360)
T ss_dssp EEEEESCGGGSCHHHHHH---------HHHHHHHTEEEEEEEEEEECCBCGGGC---------C----------SHHHHH
T ss_pred EEEEcccccCCCHHHHHH---------HHHHHHHhcCCCcEEEEEEEeccCCCC---------C----------cchhhh
Confidence 999999999998876433 699999999999999998754 22100 0 011111
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCccccc---ccceEEEEEcCCCC
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIF---TPMYFFLARKPQHG 305 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~arKp~~~ 305 (305)
...... ...+....+.+++..+++++||.++........ ....++.++|+.++
T Consensus 304 ~~~~~~---~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 359 (360)
T 1tw3_A 304 LDLRML---VFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPAATG 359 (360)
T ss_dssp HHHHHH---HHHSCCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEEC---
T ss_pred ccHHHh---hhcCCcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEeCCCC
Confidence 111111 112334557789999999999988774333221 11568999998653
No 59
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=1.9e-18 Score=142.28 Aligned_cols=98 Identities=24% Similarity=0.367 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
++.+|||+|||+|.++..+ +. +|+|+|+|+.+++.++++. .++.++++|+.++++++++||+|++..++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 105 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTTL 105 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESCT
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcChh
Confidence 7789999999999998877 45 9999999999999998875 46899999999999888999999999999
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+|++++.. +++++.++|+|||.+++.+.+
T Consensus 106 ~~~~~~~~-----------~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 106 EFVEDVER-----------VLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp TTCSCHHH-----------HHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHHH-----------HHHHHHHHcCCCCEEEEEecC
Confidence 99998766 599999999999999998753
No 60
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.76 E-value=1.4e-17 Score=149.10 Aligned_cols=176 Identities=21% Similarity=0.220 Sum_probs=127.6
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
+...+.+.++.+|||||||+|.++..+++ .++.+++++|+ +.+++.|++++...++.++++++++|+.+ +++. .||
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D 250 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TAD 250 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEE
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCC
Confidence 33455667789999999999999999995 45789999999 99999999999888877789999999976 4444 499
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec--cCCCCCCCCCccccCCCcccccccccchhHH
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK--DLAPDSPLPWYLPLDTSHFSLSSFRLTSVGR 248 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (305)
+|++..+++|+++..... +++++.++|+|||.+++.+. ..... . ......
T Consensus 251 ~v~~~~vl~~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~----------~---------~~~~~~ 302 (374)
T 1qzz_A 251 VVLLSFVLLNWSDEDALT---------ILRGCVRALEPGGRLLVLDRADVEGDG----------A---------DRFFST 302 (374)
T ss_dssp EEEEESCGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEECCH--------------------------HHHHH
T ss_pred EEEEeccccCCCHHHHHH---------HHHHHHHhcCCCcEEEEEechhhcCCC----------C---------Ccchhh
Confidence 999999999999876433 69999999999999999874 22210 0 001111
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccc-----eEEEEEcCC
Q 042544 249 FVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPM-----YFFLARKPQ 303 (305)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~arKp~ 303 (305)
+...... ...+-...+.+++..+++++||.++...... ... .++.++|+.
T Consensus 303 ~~~~~~~---~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~--~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 303 LLDLRML---TFMGGRVRTRDEVVDLAGSAGLALASERTSG--STTLPFDFSILEFTAVS 357 (374)
T ss_dssp HHHHHHH---HHHSCCCCCHHHHHHHHHTTTEEEEEEEEEC--CSSCSSCEEEEEEEECC
T ss_pred hcchHHH---HhCCCcCCCHHHHHHHHHHCCCceEEEEECC--CCcccCCcEEEEEEECc
Confidence 1111111 1123344577899999999999887743332 233 688888874
No 61
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=1.3e-18 Score=146.32 Aligned_cols=101 Identities=27% Similarity=0.353 Sum_probs=88.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEec
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYAI 175 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~ 175 (305)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ++++++|+.+. ++++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 457789999999999999999876 78999999999999988763 78899998874 7888999999999
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
.+++|++++.... +++++.++|+|||.+++.+.
T Consensus 109 ~~l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 109 HFVEHLDPERLFE---------LLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp SCGGGSCGGGHHH---------HHHHHHHHBCTTCCEEEEEE
T ss_pred CchhhCCcHHHHH---------HHHHHHHHcCCCcEEEEEeC
Confidence 9999999764322 69999999999999999764
No 62
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.76 E-value=6.5e-18 Score=146.70 Aligned_cols=105 Identities=21% Similarity=0.315 Sum_probs=93.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHh--hcCCeEEEEcCCHHHHHHHHHHHHhc-CCCCCeEEEEcCCCCCCCCC------CCe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ--FSSTSVTGLNNNEYQITRGKELNRFA-GVDKTCNFVKADFMKMPFPD------NSF 169 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~------~~f 169 (305)
.++.+|||||||+|.++..+++ .++.+|+|+|+|+.+++.|++++... +...+++++++|+.++++++ ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 5788999999999999999995 35899999999999999999998876 44568999999999988776 899
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
|+|++..+++|+ +... +++++.++|+|||.+++.
T Consensus 115 D~V~~~~~l~~~-~~~~-----------~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 115 DMITAVECAHWF-DFEK-----------FQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEESCGGGS-CHHH-----------HHHHHHHHEEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CHHH-----------HHHHHHHhcCCCcEEEEE
Confidence 999999999999 7655 699999999999999883
No 63
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=5.4e-18 Score=139.26 Aligned_cols=111 Identities=23% Similarity=0.284 Sum_probs=92.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
..++.+|||+|||+|..+..++...+.+|+|+|+|+.|++.+++++...+ .+++++++|+..+++++++||+|++..+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcCh
Confidence 45678999999999998555444357899999999999999999887655 3689999999998888899999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
++|++...... +++++.++|+|||.+++.+...
T Consensus 99 l~~~~~~~~~~---------~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 99 IFHMRKNDVKE---------AIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEEET
T ss_pred HHhCCHHHHHH---------HHHHHHHHcCCCcEEEEEEecc
Confidence 99995333322 6999999999999999987654
No 64
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.75 E-value=3.1e-18 Score=144.28 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++... +++++++|+.++ +++++||+|++..++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~l 113 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHVL 113 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESCG
T ss_pred cCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhHH
Confidence 46779999999999999999975 56999999999999999987532 699999999887 467899999999999
Q ss_pred cccCChhhhhhcCCCCCcccHHHHH-HHHHhCCceEEEeccC
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCL-EALKQAGFEVIWEKDL 219 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~L~~gG~~~i~~~~~ 219 (305)
+|++++.. +++++. ++|+|||.+++.+.+.
T Consensus 114 ~~~~~~~~-----------~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 114 EHIDDPVA-----------LLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp GGCSSHHH-----------HHHHHHHTTEEEEEEEEEEEECT
T ss_pred HhhcCHHH-----------HHHHHHHHhcCCCCEEEEEcCCh
Confidence 99999866 699999 9999999999987543
No 65
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.75 E-value=1.5e-17 Score=146.74 Aligned_cols=174 Identities=16% Similarity=0.171 Sum_probs=127.2
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
.+...++..+ .+|||+|||+|..+..+++ .++.+++++|+ +.+++.+++++...++.++++++.+|+.+ +++ ++|
T Consensus 159 ~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~ 234 (334)
T 2ip2_A 159 EIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNG 234 (334)
T ss_dssp HHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSC
T ss_pred HHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCC
Confidence 3444556666 8999999999999999995 46789999999 99999999988776666789999999987 565 679
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
|+|++..+++|+++..... ++++++++|+|||.+++.+....... .+ .....
T Consensus 235 D~v~~~~vl~~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~-~~------------------~~~~~ 286 (334)
T 2ip2_A 235 DIYLLSRIIGDLDEAASLR---------LLGNCREAMAGDGRVVVIERTISASE-PS------------------PMSVL 286 (334)
T ss_dssp SEEEEESCGGGCCHHHHHH---------HHHHHHHHSCTTCEEEEEECCBCSSS-CC------------------HHHHH
T ss_pred CEEEEchhccCCCHHHHHH---------HHHHHHHhcCCCCEEEEEEeccCCCC-Cc------------------chhHH
Confidence 9999999999998876433 69999999999999999875443210 00 01111
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
+..... ....-...+.+++..+++++||.++.... ...+..++.++|
T Consensus 287 ~~~~~~---~~~~~~~~t~~e~~~ll~~aGf~~~~~~~--~~~~~~~i~~~~ 333 (334)
T 2ip2_A 287 WDVHLF---MACAGRHRTTEEVVDLLGRGGFAVERIVD--LPMETRMIVAAR 333 (334)
T ss_dssp HHHHHH---HHHSCCCCBHHHHHHHHHHTTEEEEEEEE--ETTTEEEEEEEE
T ss_pred hhhHhH---hhCCCcCCCHHHHHHHHHHCCCceeEEEE--CCCCCEEEEEEe
Confidence 111111 11123445678999999999998877432 223456788887
No 66
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=3.8e-18 Score=147.64 Aligned_cols=117 Identities=20% Similarity=0.287 Sum_probs=96.4
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCC---CCeEEEEcCCCCCC---
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVD---KTCNFVKADFMKMP--- 163 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---~~~~~~~~d~~~~~--- 163 (305)
+++...+...++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++....+.. .++.+..+|+..++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 34444444457789999999999999999976 679999999999999999876443321 35789999998877
Q ss_pred CCCCCeeEEEec-ccccccCC-------hhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 164 FPDNSFDAVYAI-EATCHAPD-------AAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 164 ~~~~~fD~v~~~-~~l~~~~~-------~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+++++||+|++. .+++|+++ ... +++++.++|+|||.+++...+
T Consensus 126 ~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 126 PAGDGFDAVICLGNSFAHLPDSKGDQSEHRL-----------ALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CCTTCEEEEEECTTCGGGSCCSSSSSHHHHH-----------HHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEcChHHhhcCccccCHHHHHH-----------HHHHHHHHcCCCeEEEEEeCC
Confidence 778999999998 89999998 433 699999999999999987653
No 67
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.74 E-value=1.1e-17 Score=139.63 Aligned_cols=111 Identities=27% Similarity=0.392 Sum_probs=96.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC----CCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV----DKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
++++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++....+. ..++.++++|+..+++++++||+|+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 357889999999999999999976 78999999999999999998876654 2358999999999998889999999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+..+++|++++... ..+++++.++|+|||.+++.+.
T Consensus 107 ~~~~l~~~~~~~~~--------~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 107 MQAFLTSVPDPKER--------SRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp EESCGGGCCCHHHH--------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHH--------HHHHHHHHHHcCCCeEEEEEEC
Confidence 99999999987632 1269999999999999999874
No 68
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.74 E-value=1.5e-18 Score=150.29 Aligned_cols=108 Identities=22% Similarity=0.319 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCC-----------------------------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVD----------------------------- 149 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~----------------------------- 149 (305)
++.+|||||||+|.++..++.. ++.+|+|+|+|+.|++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999999964 5789999999999999999986554321
Q ss_pred ----------------------------CCeEEEEcCCCCCC-----CCCCCeeEEEecccccccC----ChhhhhhcCC
Q 042544 150 ----------------------------KTCNFVKADFMKMP-----FPDNSFDAVYAIEATCHAP----DAAEIEIGDG 192 (305)
Q Consensus 150 ----------------------------~~~~~~~~d~~~~~-----~~~~~fD~v~~~~~l~~~~----~~~~~~~~~~ 192 (305)
.+++|+++|+...+ +.+++||+|+|..+++|+. +....
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~----- 200 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLK----- 200 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHH-----
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHH-----
Confidence 57999999998643 5678999999999998774 22222
Q ss_pred CCCcccHHHHHHHHHhCCceEEEe
Q 042544 193 LPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 193 ~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+++++.++|+|||.+++..
T Consensus 201 ----~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 201 ----RMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp ----HHHHHHHHHEEEEEEEEEEC
T ss_pred ----HHHHHHHHHhCCCcEEEEec
Confidence 26999999999999999853
No 69
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=1.4e-17 Score=139.92 Aligned_cols=110 Identities=27% Similarity=0.369 Sum_probs=95.5
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
+...+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++... .+++++++|+..+++++++||
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEE
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCce
Confidence 344566668899999999999999999976 55 999999999999999886532 368999999999888888999
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++..+++|+++... +++++.++|+|||.+++.+.
T Consensus 110 ~v~~~~~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 110 LAYSSLALHYVEDVAR-----------LFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEESCGGGCSCHHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEeccccccchHHH-----------HHHHHHHhcCcCcEEEEEeC
Confidence 9999999999988765 69999999999999999764
No 70
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=1.1e-17 Score=141.96 Aligned_cols=109 Identities=22% Similarity=0.342 Sum_probs=95.2
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
+...+.+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.++++ ..+++++++|+..++ ++++||
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~-~~~~fD 97 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK-PAQKAD 97 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC-CSSCEE
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC-ccCCcC
Confidence 444566778889999999999999999854 578999999999999999886 246899999999988 788999
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+|++..+++|+++... +++++.++|+|||.+++.+.+
T Consensus 98 ~v~~~~~l~~~~~~~~-----------~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 98 LLYANAVFQWVPDHLA-----------VLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp EEEEESCGGGSTTHHH-----------HHHHHGGGEEEEEEEEEEEEC
T ss_pred EEEEeCchhhCCCHHH-----------HHHHHHHhcCCCeEEEEEeCC
Confidence 9999999999988766 599999999999999998743
No 71
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=1.9e-17 Score=142.84 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=93.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. +++++++|+..+++ +++||+|++..++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccch
Confidence 36789999999999999999976 78999999999999999999988776 69999999998776 7889999999999
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+|++++.... +++++.++|+|||.+++...
T Consensus 195 ~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 195 MFLNRERVPS---------IIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GGSCGGGHHH---------HHHHHHHTEEEEEEEEEEEE
T ss_pred hhCCHHHHHH---------HHHHHHHhcCCCcEEEEEEe
Confidence 9997765432 69999999999999887654
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=7.1e-17 Score=130.68 Aligned_cols=103 Identities=20% Similarity=0.241 Sum_probs=88.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEec-c
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAI-E 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~-~ 176 (305)
++++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.++++. .++.++++|+..+++++++||+|++. .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeEEEECCc
Confidence 457889999999999999999976 789999999999999998864 25899999999888888899999998 6
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++|++...... +++++.++|+|||.+++..
T Consensus 117 ~~~~~~~~~~~~---------~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 117 VMGFLAEDGREP---------ALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEE
T ss_pred HHhhcChHHHHH---------HHHHHHHHhCCCCEEEEEe
Confidence 888886554322 6999999999999999865
No 73
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.73 E-value=4e-17 Score=138.86 Aligned_cols=108 Identities=22% Similarity=0.278 Sum_probs=89.5
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+.+...+. ++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++.. . .++++|+..+++++++|
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~~~~~~f 115 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLPFPSGAF 115 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCCSCTTCE
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCCCCCCCE
Confidence 34444443 6789999999999999999976 7899999999999999988743 1 28999999999888999
Q ss_pred eEEEeccccccc-CChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 170 DAVYAIEATCHA-PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 170 D~v~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
|+|++..++.|+ ++... +++++.++|+|||.+++...+
T Consensus 116 D~v~~~~~~~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 116 EAVLALGDVLSYVENKDK-----------AFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp EEEEECSSHHHHCSCHHH-----------HHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEEEcchhhhccccHHH-----------HHHHHHHHcCCCeEEEEEeCC
Confidence 999999877766 55444 699999999999999987643
No 74
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.73 E-value=5.1e-19 Score=160.77 Aligned_cols=178 Identities=15% Similarity=0.139 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCe-EEEEcCC
Q 042544 81 LRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTC-NFVKADF 159 (305)
Q Consensus 81 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~-~~~~~d~ 159 (305)
+........+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|+++ +..... .+...+.
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~ 162 (416)
T 4e2x_A 88 MREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATA 162 (416)
T ss_dssp HHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhH
Confidence 34445556666777777788899999999999999999976 77999999999999998875 222111 1223344
Q ss_pred CCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCC-CCCccccCCCcccc
Q 042544 160 MKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSP-LPWYLPLDTSHFSL 238 (305)
Q Consensus 160 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~-~~~~~~~~~~~~~~ 238 (305)
..+++++++||+|++.++++|++++.. +++++.++|+|||.+++...+...... ..|. .+
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h~~d~~~-----------~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~--------~~ 223 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCHIPYVQS-----------VLEGVDALLAPDGVFVFEDPYLGDIVAKTSFD--------QI 223 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGGCTTHHH-----------HHHHHHHHEEEEEEEEEEEECHHHHHHHTCGG--------GC
T ss_pred hhcccCCCCEEEEEECChHHhcCCHHH-----------HHHHHHHHcCCCeEEEEEeCChHHhhhhcchh--------hh
Confidence 445666789999999999999998866 699999999999999997633210000 0000 00
Q ss_pred cccccchhHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 239 SSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
. ......++.+++..+++++||.++.......+.....++++|+
T Consensus 224 ~--------------------~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~~ 267 (416)
T 4e2x_A 224 F--------------------DEHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLARQ 267 (416)
T ss_dssp S--------------------TTCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSEEEEEEEET
T ss_pred h--------------------hhhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCEEEEEEEeC
Confidence 0 0011123457899999999998887554444444444444443
No 75
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.72 E-value=5.3e-17 Score=134.95 Aligned_cols=108 Identities=26% Similarity=0.417 Sum_probs=90.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+ .+++++++|+.++++++++||+|++..++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEEcCch
Confidence 35789999999999999999875 4599999999999999999887665 47999999999988888899999999984
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
++........ +++++.++|+|||.+++.+.+
T Consensus 114 ~~~~~~~~~~---------~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 114 VHFEPLELNQ---------VFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGCCHHHHHH---------HHHHHHHHEEEEEEEEEEEEC
T ss_pred HhCCHHHHHH---------HHHHHHHHcCCCcEEEEEecC
Confidence 4443322211 699999999999999998654
No 76
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.71 E-value=1.5e-16 Score=130.32 Aligned_cols=109 Identities=15% Similarity=0.028 Sum_probs=91.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
.+...+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..+...+++++++|+.+.......||
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D 124 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPE 124 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCS
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCC
Confidence 3455677888999999999999999999987 899999999999999999999988886689999999987322335799
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++...+ +.. +++++.++|+|||.+++..
T Consensus 125 ~v~~~~~~----~~~------------~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 125 AVFIGGGG----SQA------------LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp EEEECSCC----CHH------------HHHHHHHHSCTTCEEEEEE
T ss_pred EEEECCcc----cHH------------HHHHHHHhcCCCcEEEEEe
Confidence 99987643 221 4899999999999999875
No 77
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=2.3e-17 Score=133.01 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=86.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCCeeEEEec
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNSFDAVYAI 175 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~ 175 (305)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|++++...++ .++++++.+...++ +.+++||+|++.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4568899999999999999999977 89999999999999999999988887 68999998887643 447889999876
Q ss_pred ccccccCC--------hhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPD--------AAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~--------~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.. +++. +... ...++++.++|+|||.+++..
T Consensus 97 ~~--~~~~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 97 LG--YLPSADKSVITKPHTT--------LEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EC-------------CHHHH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CC--CCCCcchhcccChhhH--------HHHHHHHHHhcCCCcEEEEEE
Confidence 32 2221 1110 125899999999999999865
No 78
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.71 E-value=4e-17 Score=144.76 Aligned_cols=172 Identities=15% Similarity=0.106 Sum_probs=119.1
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
.+...+++.++.+|||||||+|.++..+++ .++.+++++|+ +.++. +++....+..++++++.+|+. .++| +|
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~ 248 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HA 248 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CC
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCCC--CC
Confidence 445566777889999999999999999985 46789999999 45544 333333345568999999997 3454 79
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
|+|++..++||+++++... ++++++++|+|||.+++.+...... ..++ ....
T Consensus 249 D~v~~~~vlh~~~d~~~~~---------~L~~~~~~LkpgG~l~i~e~~~~~~-~~~~------------------~~~~ 300 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVR---------ILTNCRRVMPAHGRVLVIDAVVPEG-NDAH------------------QSKE 300 (348)
T ss_dssp SEEEEESCGGGSCHHHHHH---------HHHHHHHTCCTTCEEEEEECCBCSS-SSCC------------------HHHH
T ss_pred cEEEEehhccCCCHHHHHH---------HHHHHHHhcCCCCEEEEEEeccCCC-CCcc------------------hhhh
Confidence 9999999999999886433 6999999999999999987544321 0010 0111
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
..... .....-...+.+++..+++++||.+++... ......++.+++
T Consensus 301 ~d~~~---~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~--~~~~~~vie~~p 347 (348)
T 3lst_A 301 MDFMM---LAARTGQERTAAELEPLFTAAGLRLDRVVG--TSSVMSIAVGVP 347 (348)
T ss_dssp HHHHH---HHTTSCCCCBHHHHHHHHHHTTEEEEEEEE--CSSSCEEEEEEE
T ss_pred cChhh---hhcCCCcCCCHHHHHHHHHHCCCceEEEEE--CCCCcEEEEEEe
Confidence 11111 111223345678999999999998877443 223345666654
No 79
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.71 E-value=1.8e-17 Score=143.89 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCC-----CeEEEEcCCC------CC--CCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDK-----TCNFVKADFM------KM--PFP 165 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-----~~~~~~~d~~------~~--~~~ 165 (305)
+++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... ++++.+.|+. .+ +++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3578999999999987776665446799999999999999999887654321 2578888872 22 356
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+++||+|+|..+++|+.+.... ..+++++.++|||||.+++.+.+
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~--------~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHY--------ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTH--------HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHH--------HHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999999886432211 12699999999999999998753
No 80
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.71 E-value=1.5e-16 Score=141.98 Aligned_cols=166 Identities=16% Similarity=0.135 Sum_probs=117.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
..+..+|||||||+|.++..+++ .++.+++++|+ +.+++.+++ ..+++++.+|+.+ +++++ |+|++..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~p~~--D~v~~~~ 269 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFD-GVPKG--DAIFIKW 269 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT-CCCCC--SEEEEES
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCC-CCCCC--CEEEEec
Confidence 56778999999999999999984 57889999999 888876643 2479999999987 67654 9999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHHHH
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVK 256 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 256 (305)
++||+++..... ++++++++|+|||.+++.+.........++ ....... .++..
T Consensus 270 vlh~~~~~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---------------~~~~~~~--~d~~~ 323 (368)
T 3reo_A 270 ICHDWSDEHCLK---------LLKNCYAALPDHGKVIVAEYILPPSPDPSI---------------ATKVVIH--TDALM 323 (368)
T ss_dssp CGGGBCHHHHHH---------HHHHHHHHSCTTCEEEEEECCCCSSCCCCH---------------HHHHHHH--HHHHH
T ss_pred hhhcCCHHHHHH---------HHHHHHHHcCCCCEEEEEEeccCCCCCCch---------------hhhHHHh--hhHHH
Confidence 999999886543 699999999999999998854432111000 0000001 11111
Q ss_pred HHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEcC
Q 042544 257 ALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARKP 302 (305)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arKp 302 (305)
.....+-...+.+++..+++++||..+... ......+++.+.|.
T Consensus 324 ~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~--~~~~~~~vie~~k~ 367 (368)
T 3reo_A 324 LAYNPGGKERTEKEFQALAMASGFRGFKVA--SCAFNTYVMEFLKT 367 (368)
T ss_dssp HHHSSBCCCCCHHHHHHHHHHTTCCEEEEE--EEETTEEEEEEECC
T ss_pred HhhcCCCccCCHHHHHHHHHHCCCeeeEEE--EeCCCcEEEEEEeC
Confidence 111113344567899999999999988733 33345566777765
No 81
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.71 E-value=7e-17 Score=129.09 Aligned_cols=111 Identities=15% Similarity=0.060 Sum_probs=92.1
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFPDN 167 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 167 (305)
..+...+.+.++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+...++ ++++|..+ ++..++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 44555667788899999999999999999954 5789999999999999999999888876678 88888854 333337
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|++..++++ .. +++++.++|+|||.+++..
T Consensus 94 ~~D~i~~~~~~~~----~~-----------~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----PG-----------VFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp CCSEEEECC-TTC----TT-----------HHHHHHHTCCTTCEEEEEE
T ss_pred CCCEEEECCcccH----HH-----------HHHHHHHhcCCCCEEEEEe
Confidence 8999999998877 11 5999999999999999875
No 82
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.71 E-value=1.5e-17 Score=138.42 Aligned_cols=100 Identities=26% Similarity=0.299 Sum_probs=88.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC--CCCCCCCeeEEEecc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK--MPFPDNSFDAVYAIE 176 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~fD~v~~~~ 176 (305)
.++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .+++++|+.. .++++++||+|++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGD 101 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEES
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECC
Confidence 57789999999999999999977 699999999999999887642 3789999986 567778999999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+++|++++.. +++++.++|+|||.+++...+
T Consensus 102 ~l~~~~~~~~-----------~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 102 VLEHLFDPWA-----------VIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp CGGGSSCHHH-----------HHHHTGGGEEEEEEEEEEEEC
T ss_pred hhhhcCCHHH-----------HHHHHHHHcCCCCEEEEEeCC
Confidence 9999998865 599999999999999998754
No 83
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.71 E-value=4.4e-17 Score=137.68 Aligned_cols=109 Identities=14% Similarity=0.018 Sum_probs=86.3
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-----C
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-----P 165 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~ 165 (305)
.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|++++... ++..++.+++. .
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc
Confidence 3445677888999999999999999999976 789999999999999999986533 22333333222 2
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++||+|++..+++|++..+... .++++.++| |||.++++..
T Consensus 108 ~~~fD~Vv~~~~l~~~~~~~~~~---------~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTTEEARR---------ACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TTCCSEEEEESCGGGSCHHHHHH---------HHHHHHHHH-TTSEEEEEEE
T ss_pred CCCccEEEEhhhhHhCCHHHHHH---------HHHHHHHhC-cCcEEEEEec
Confidence 57899999999999987655432 699999999 9999998764
No 84
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.71 E-value=1.6e-17 Score=141.36 Aligned_cols=168 Identities=17% Similarity=0.128 Sum_probs=114.7
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC----------------------------
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV---------------------------- 148 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---------------------------- 148 (305)
+..++.+|||||||+|.++..++.....+|+|+|+|+.|++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4456789999999999999998865224999999999999999988754320
Q ss_pred CCCe-EEEEcCCCCCC-CCC---CCeeEEEecccccccCCh--hhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCC
Q 042544 149 DKTC-NFVKADFMKMP-FPD---NSFDAVYAIEATCHAPDA--AEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAP 221 (305)
Q Consensus 149 ~~~~-~~~~~d~~~~~-~~~---~~fD~v~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~ 221 (305)
..++ .++++|+...+ +++ ++||+|++..++++++.. ... .+++++.++|+|||.+++.+..-.
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~---------~~l~~~~~~LkpgG~li~~~~~~~- 202 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYR---------TALRNLGSLLKPGGFLVMVDALKS- 202 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHH---------HHHHHHHTTEEEEEEEEEEEESSC-
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHH---------HHHHHHHhhCCCCcEEEEEecCCC-
Confidence 0127 89999998753 355 789999999999955432 111 169999999999999999762111
Q ss_pred CCCCCCccccCCCcccccccccchhHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCccc--------cccc
Q 042544 222 DSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKE--------IFTP 293 (305)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~ 293 (305)
.++..... .....+.+.+++..++.++||.++...... .+..
T Consensus 203 ----~~~~~~~~--------------------------~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~ 252 (265)
T 2i62_A 203 ----SYYMIGEQ--------------------------KFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEG 252 (265)
T ss_dssp ----CEEEETTE--------------------------EEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCC
T ss_pred ----ceEEcCCc--------------------------cccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccce
Confidence 11100000 001123455788999999999776533211 1224
Q ss_pred ceEEEEEcCCC
Q 042544 294 MYFFLARKPQH 304 (305)
Q Consensus 294 ~~~~~arKp~~ 304 (305)
..+++|||+..
T Consensus 253 ~~~~~a~K~~~ 263 (265)
T 2i62_A 253 LFSLVGRKPGR 263 (265)
T ss_dssp EEEEEEECCC-
T ss_pred EEEEEeccccc
Confidence 56799999863
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=7.9e-17 Score=136.21 Aligned_cols=111 Identities=24% Similarity=0.305 Sum_probs=90.4
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
.....++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+. ++.++++|+.+++++ ++||+|++
T Consensus 36 ~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 36 EDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp HTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-SCEEEEEE
T ss_pred HhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-CCccEEEE
Confidence 344557789999999999999999976 78999999999999999999877654 589999999988765 68999998
Q ss_pred cc-cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 175 IE-ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 175 ~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
.. .+++++...... +++++.++|+|||.+++...+
T Consensus 112 ~~~~~~~~~~~~~~~---------~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRK---------LFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp CSSGGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCchhcCCHHHHHH---------HHHHHHHHcCCCeEEEEeccc
Confidence 74 455554333322 699999999999999886543
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.71 E-value=4.1e-17 Score=134.68 Aligned_cols=169 Identities=12% Similarity=0.119 Sum_probs=117.8
Q ss_pred HHhhHHHHHHHHHhhhHHHHHhhcCCccccccCCCCccHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc
Q 042544 43 RKANYTDMVNKYYDLVTSFYEFGWGESFHFAPRWKGESLRESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS 122 (305)
Q Consensus 43 ~~~~~~~~~~~~yd~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~ 122 (305)
....+++..+..||.....|... ...|........+. . .....++.+|||||||+|.++..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~---l~~~~~~~~vLDiG~G~G~~~~~l---- 85 (215)
T 2zfu_A 24 AAQRLFQEDPEAFLLYHRGFQSQ-------VKKWPLQPVDRIAR----D---LRQRPASLVVADFGCGDCRLASSI---- 85 (215)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHH-------HTTSSSCHHHHHHH----H---HHTSCTTSCEEEETCTTCHHHHHC----
T ss_pred HHHHHHHHhHHHHHHHHHHHHhh-------hcccchhHHHHHHH----H---HhccCCCCeEEEECCcCCHHHHHh----
Confidence 34445566667777665555432 12343333222221 1 223457789999999999998877
Q ss_pred CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHH
Q 042544 123 STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKC 202 (305)
Q Consensus 123 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 202 (305)
..+|+|+|+|+. ++.++++|+.++++++++||+|++..++++ ++... +++++
T Consensus 86 ~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~-----------~l~~~ 137 (215)
T 2zfu_A 86 RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRD-----------FLEEA 137 (215)
T ss_dssp CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHH-----------HHHHH
T ss_pred hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHH-----------HHHHH
Confidence 368999999986 367899999998888899999999999964 55544 69999
Q ss_pred HHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 042544 203 LEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGL 282 (305)
Q Consensus 203 ~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 282 (305)
.++|+|||.+++.+.... + .+..++..+++++|+.+
T Consensus 138 ~~~L~~gG~l~i~~~~~~------~--------------------------------------~~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 138 NRVLKPGGLLKVAEVSSR------F--------------------------------------EDVRTFLRAVTKLGFKI 173 (215)
T ss_dssp HHHEEEEEEEEEEECGGG------C--------------------------------------SCHHHHHHHHHHTTEEE
T ss_pred HHhCCCCeEEEEEEcCCC------C--------------------------------------CCHHHHHHHHHHCCCEE
Confidence 999999999999762110 0 13467889999999987
Q ss_pred hcCCcccccccceEEEEEcCC
Q 042544 283 AAGGRKEIFTPMYFFLARKPQ 303 (305)
Q Consensus 283 ~~~~~~~~~~~~~~~~arKp~ 303 (305)
+... ......++++++|+.
T Consensus 174 ~~~~--~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 174 VSKD--LTNSHFFLFDFQKTG 192 (215)
T ss_dssp EEEE--CCSTTCEEEEEEECS
T ss_pred EEEe--cCCCeEEEEEEEecC
Confidence 7622 223345778888874
No 87
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.71 E-value=2.6e-16 Score=128.85 Aligned_cols=112 Identities=15% Similarity=0.043 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
..+...+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++...+. ++++++++|+.+.....++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCC
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCC
Confidence 44555678889999999999999999999965 458999999999999999999988877 5799999999764333477
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++..+++ +... +++++.++|+|||.+++..
T Consensus 109 ~D~i~~~~~~~---~~~~-----------~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 109 PDRVFIGGSGG---MLEE-----------IIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp CSEEEESCCTT---CHHH-----------HHHHHHHHCCTTCEEEEEE
T ss_pred CCEEEECCCCc---CHHH-----------HHHHHHHhcCCCeEEEEEe
Confidence 99999987665 3322 6999999999999999865
No 88
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.70 E-value=1e-16 Score=129.73 Aligned_cols=108 Identities=14% Similarity=0.031 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCCCeeEEEecc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDNSFDAVYAIE 176 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 176 (305)
.++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|++++...+. ++++++++|+.+++ +++++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 46789999999999999988876556899999999999999999988887 57999999998753 4468899999987
Q ss_pred ccccc-CChhhhhhcCCCCCcccHHHHHH--HHHhCCceEEEecc
Q 042544 177 ATCHA-PDAAEIEIGDGLPDIRSTRKCLE--ALKQAGFEVIWEKD 218 (305)
Q Consensus 177 ~l~~~-~~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~~~i~~~~ 218 (305)
.+++. ++... .+.++.+ +|+|||.+++....
T Consensus 122 p~~~~~~~~~~-----------~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVDSADVDA-----------ILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CTTSCHHHHHH-----------HHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCcchhhHHH-----------HHHHHHhcCccCCCeEEEEEecC
Confidence 76664 33333 5888988 99999999997654
No 89
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.70 E-value=1.7e-17 Score=143.53 Aligned_cols=108 Identities=19% Similarity=0.149 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCChHHHHHH-----hhcCCeE--EEEcCCHHHHHHHHHHHHhcCCCCCeEE--EEcCCCCCC------
Q 042544 99 KSGQKVLDVGCGIGGPLREIA-----QFSSTSV--TGLNNNEYQITRGKELNRFAGVDKTCNF--VKADFMKMP------ 163 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~-----~~~~~~v--~gvD~s~~~l~~a~~~~~~~~~~~~~~~--~~~d~~~~~------ 163 (305)
.++.+|||||||+|.++..++ ..++..| +|+|+|+.|++.|++++.......++.+ ..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 467799999999998765433 2245644 9999999999999998765321234544 455554432
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++++||+|++..+++|++++.. ++++++++|||||.+++...
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~-----------~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPA-----------TLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHH-----------HHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCCHHH-----------HHHHHHHHcCCCcEEEEEEe
Confidence 56789999999999999999876 69999999999999998753
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=1.4e-17 Score=139.57 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=87.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEe-
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYA- 174 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~- 174 (305)
+.++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+ .+++++++|+.++ ++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 35778999999999999999986544599999999999999999887654 4799999999887 888899999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+.+ +.++...... ..+++++.++|||||.+++.+
T Consensus 136 ~~~~-~~~~~~~~~~------~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 136 TYPL-SEETWHTHQF------NFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCC-BGGGTTTHHH------HHHHHTHHHHEEEEEEEEECC
T ss_pred Cccc-chhhhhhhhH------HHHHHHHHHhcCCCeEEEEEe
Confidence 5554 3333211000 015899999999999998754
No 91
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.70 E-value=5.1e-17 Score=141.03 Aligned_cols=116 Identities=19% Similarity=0.183 Sum_probs=93.1
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCCCCe
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVD--KTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~f 169 (305)
+...+...+ .+|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...+.. .+++++++|+.++++ +++|
T Consensus 75 ~~~~~~~~~-~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f 151 (299)
T 3g2m_A 75 FATRTGPVS-GPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRF 151 (299)
T ss_dssp HHHHHCCCC-SCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCE
T ss_pred HHHhhCCCC-CcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCc
Confidence 333444444 49999999999999999976 789999999999999999998765421 579999999999887 6889
Q ss_pred eEEEec-ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 170 DAVYAI-EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 170 D~v~~~-~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
|+|++. .+++|++...... +++++.++|+|||.+++...+.
T Consensus 152 D~v~~~~~~~~~~~~~~~~~---------~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 152 GTVVISSGSINELDEADRRG---------LYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEEECHHHHTTSCHHHHHH---------HHHHHHHHEEEEEEEEEEEECC
T ss_pred CEEEECCcccccCCHHHHHH---------HHHHHHHHcCCCcEEEEEeecC
Confidence 999976 5566665433322 6999999999999999987544
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.70 E-value=7.8e-17 Score=135.70 Aligned_cols=107 Identities=16% Similarity=0.143 Sum_probs=88.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-----CCeeE
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD-----NSFDA 171 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~fD~ 171 (305)
.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++.. ..+++++++|+.+++... ..||+
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccccccCccE
Confidence 3567889999999999999999976 4599999999999999998762 237999999998854321 24899
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|++..+++|++...... +++++.++|+|||.+++.+.
T Consensus 128 v~~~~~~~~~~~~~~~~---------~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 128 IYMRTGFHHIPVEKREL---------LGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp EEEESSSTTSCGGGHHH---------HHHHHHHHHTTTCEEEEEEE
T ss_pred EEEcchhhcCCHHHHHH---------HHHHHHHHcCCCCEEEEEeC
Confidence 99999999998543322 69999999999999888764
No 93
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.69 E-value=1.4e-16 Score=130.94 Aligned_cols=110 Identities=17% Similarity=0.165 Sum_probs=95.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
..+...+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|++++...+.. +++++++|+...+.++++|
T Consensus 67 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 67 ARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCc
Confidence 44555677888999999999999999999976 789999999999999999999887765 7999999998866567899
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
|+|++..+++|+++. +.+.|+|||.+++....
T Consensus 145 D~i~~~~~~~~~~~~-----------------~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 145 DAIIVTAAPPEIPTA-----------------LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEESSBCSSCCTH-----------------HHHTEEEEEEEEEEECS
T ss_pred cEEEEccchhhhhHH-----------------HHHhcccCcEEEEEEcC
Confidence 999999999887653 67899999999997643
No 94
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.69 E-value=2.7e-16 Score=132.04 Aligned_cols=106 Identities=19% Similarity=0.312 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc-c
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE-A 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 177 (305)
+++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|+++....+ .+++++++|+.+++++ ++||+|++.. +
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~~ 106 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP-EPVDAITILCDS 106 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-SCEEEEEECTTG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-CCcCEEEEeCCc
Confidence 45689999999999999999875 799999999999999999887655 4689999999988776 7899999986 9
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++|+.+.... ..+++++.++|+|||.+++...
T Consensus 107 ~~~~~~~~~~--------~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 107 LNYLQTEADV--------KQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GGGCCSHHHH--------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcCCHHHH--------HHHHHHHHHhcCCCeEEEEEcC
Confidence 9999654332 1269999999999999998653
No 95
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.69 E-value=3.5e-16 Score=139.45 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=118.5
Q ss_pred HHHHcC-CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 92 LALQLG-LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 92 l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+...+. ..+..+|||||||+|.++..+++ .++.+++++|+ +.+++.+++ .++++++.+|+.+ |++++
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~-~~p~~-- 260 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFK-EVPSG-- 260 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT-CCCCC--
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCC-CCCCC--
Confidence 344444 66788999999999999999984 57889999999 888876543 2579999999987 77754
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHH
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRF 249 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 249 (305)
|+|++..++|++++.+... ++++++++|+|||.+++.+.........++ .......
T Consensus 261 D~v~~~~vlh~~~d~~~~~---------~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~---------------~~~~~~~ 316 (364)
T 3p9c_A 261 DTILMKWILHDWSDQHCAT---------LLKNCYDALPAHGKVVLVQCILPVNPEANP---------------SSQGVFH 316 (364)
T ss_dssp SEEEEESCGGGSCHHHHHH---------HHHHHHHHSCTTCEEEEEECCBCSSCCSSH---------------HHHHHHH
T ss_pred CEEEehHHhccCCHHHHHH---------HHHHHHHHcCCCCEEEEEEeccCCCCCcch---------------hhhhHHH
Confidence 9999999999999876543 699999999999999998854432110000 0000000
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 250 VTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
.++.......+-...+.+++..+++++||..++.. ......+++.+.|
T Consensus 317 --~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~--~~~~~~~vie~~k 364 (364)
T 3p9c_A 317 --VDMIMLAHNPGGRERYEREFQALARGAGFTGVKST--YIYANAWAIEFTK 364 (364)
T ss_dssp --HHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEE--EEETTEEEEEEEC
T ss_pred --hHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEE--EcCCceEEEEEeC
Confidence 11111101123344567899999999999988733 3334455665554
No 96
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=2.5e-17 Score=138.17 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=86.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEe--
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYA-- 174 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~-- 174 (305)
.+|.+|||||||+|..+..+++....+|+|||+|+.|++.|+++....+ .++.++.+|+... ++++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEee
Confidence 4788999999999999999987645799999999999999999887654 3688999988753 577889999974
Q ss_pred ---cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 175 ---IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 175 ---~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
...++|.++... +++++.|+|||||.+++.
T Consensus 137 ~~~~~~~~~~~~~~~-----------~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNF-----------IKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHH-----------HHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhh-----------hhhhhhheeCCCCEEEEE
Confidence 445666666655 599999999999998874
No 97
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.69 E-value=9.5e-17 Score=134.06 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=84.7
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC----CCCCCCCe
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK----MPFPDNSF 169 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~f 169 (305)
.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++... .++.++++|+.. .+++ ++|
T Consensus 69 ~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 69 VMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccE
Confidence 345678899999999999999999965 3489999999999999999886543 579999999987 6766 789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
|+|+ ++++++.... .+++++.++|+|||.+++.
T Consensus 145 D~v~-----~~~~~~~~~~--------~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIY-----EDVAQPNQAE--------ILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEE-----ECCCSTTHHH--------HHHHHHHHHEEEEEEEEEE
T ss_pred EEEE-----EecCChhHHH--------HHHHHHHHhCCCCcEEEEE
Confidence 9998 4455552211 1589999999999999886
No 98
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.69 E-value=1.9e-16 Score=139.70 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=92.3
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+.+...+.+.++.+|||||||+|.++..+++....+|+|+|+|+ |++.|++++...++.++++++++|+.++++++++|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 44444455677889999999999999999976445999999997 99999999988888778999999999988888899
Q ss_pred eEEEeccc---ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceE
Q 042544 170 DAVYAIEA---TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEV 213 (305)
Q Consensus 170 D~v~~~~~---l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~ 213 (305)
|+|++..+ +.+..+... ++.++.++|+|||.++
T Consensus 133 D~Ivs~~~~~~l~~~~~~~~-----------~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 133 DVIISEWMGYFLLFESMLDS-----------VLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEECCCBTTBTTTCHHHH-----------HHHHHHHHEEEEEEEE
T ss_pred EEEEEcCchhhccCHHHHHH-----------HHHHHHhhcCCCcEEE
Confidence 99998764 333333333 5889999999999887
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.68 E-value=3.6e-16 Score=126.42 Aligned_cols=114 Identities=19% Similarity=0.209 Sum_probs=94.4
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCC-CeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDK-TCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~ 168 (305)
+.+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+... +++++++|+.+ +.++++
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 119 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRK 119 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSC
T ss_pred HHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCC
Confidence 34555667778899999999999999999977 8899999999999999999988877653 49999999987 345678
Q ss_pred eeEEEecccccccC-ChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAP-DAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++...+++.. +... +++++.++|+|||.+++..
T Consensus 120 ~D~v~~~~~~~~~~~~~~~-----------~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 120 YNKIITNPPIRAGKEVLHR-----------IIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp EEEEEECCCSTTCHHHHHH-----------HHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEECCCcccchhHHHH-----------HHHHHHHHcCCCCEEEEEE
Confidence 99999988776522 2222 6999999999999999976
No 100
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.68 E-value=1.5e-16 Score=141.04 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=89.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...++.++++++++|+.++++++++||+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 347789999999999999999976556999999995 9999999999988887899999999999888899999999765
Q ss_pred cccc---CChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 178 TCHA---PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 178 l~~~---~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
.+++ ..... ++.++.++|+|||.++.
T Consensus 143 ~~~l~~~~~~~~-----------~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCLFYESMLNT-----------VLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTBTBTCCHHH-----------HHHHHHHHEEEEEEEES
T ss_pred cccccCchhHHH-----------HHHHHHHhCCCCCEEcc
Confidence 4444 33333 58889999999999874
No 101
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.68 E-value=3.8e-17 Score=141.14 Aligned_cols=107 Identities=14% Similarity=0.062 Sum_probs=81.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhc-----------------CCC------------
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFA-----------------GVD------------ 149 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-----------------~~~------------ 149 (305)
.++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|++++... +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999555444445789999999999999998865421 100
Q ss_pred CCeEEEEcCCCC-CCC-----CCCCeeEEEecccccccC----ChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 150 KTCNFVKADFMK-MPF-----PDNSFDAVYAIEATCHAP----DAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 150 ~~~~~~~~d~~~-~~~-----~~~~fD~v~~~~~l~~~~----~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
..++++++|+.. +|+ ++++||+|++..+++|++ +... +++++.++|||||.+++..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~-----------~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQR-----------ALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHH-----------HHHHHHTTEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHH-----------HHHHHHHhcCCCCEEEEEE
Confidence 014677889987 553 346799999999999954 3333 6999999999999999974
No 102
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.67 E-value=1.5e-16 Score=131.66 Aligned_cols=113 Identities=14% Similarity=0.166 Sum_probs=88.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C--CCCCCeeEEEec
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P--FPDNSFDAVYAI 175 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~--~~~~~fD~v~~~ 175 (305)
++.+|||||||+|.++..+++ .++..|+|+|+|+.+++.|++++...++. ++.++++|+.++ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 567999999999999999995 46789999999999999999999887765 699999998873 3 678999999987
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...+....... ..+....+++++.++|+|||.+++.+
T Consensus 113 ~~~p~~~~~~~~---rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNK---RRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGG---GSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhh---hhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 543332222110 00001126999999999999999875
No 103
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.67 E-value=9.7e-17 Score=141.94 Aligned_cols=123 Identities=11% Similarity=0.241 Sum_probs=95.2
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHH-------HhcCC-CCCeEEEE
Q 042544 86 KRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELN-------RFAGV-DKTCNFVK 156 (305)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~-------~~~~~-~~~~~~~~ 156 (305)
......++..+.+.++.+|||||||+|..++.++...++ +|+|||+|+.+++.|++++ ...|+ ..+++|++
T Consensus 159 ~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 159 FDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 334445666778899999999999999999999954455 5999999999999998754 33454 25899999
Q ss_pred cCCCCCCCCC--CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCC
Q 042544 157 ADFMKMPFPD--NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLA 220 (305)
Q Consensus 157 ~d~~~~~~~~--~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~ 220 (305)
+|+.++++++ ..||+|+++..+ +.++... .+.++.+.|||||.+++.+....
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~-----------aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGPEVDH-----------QLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCHHHHH-----------HHHHHHTTSCTTCEEEESSCSSC
T ss_pred CcccCCccccccCCccEEEEcccc-cCchHHH-----------HHHHHHHcCCCCcEEEEeecccC
Confidence 9999877643 469999987665 3344433 58899999999999998765443
No 104
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=2.5e-16 Score=149.13 Aligned_cols=117 Identities=15% Similarity=0.287 Sum_probs=96.8
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc--CCeEEEEcCCHHHHHHHHHHHHhc------CCCCCeEEEEcCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFS--STSVTGLNNNEYQITRGKELNRFA------GVDKTCNFVKADFMKM 162 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~------~~~~~~~~~~~d~~~~ 162 (305)
++...+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|++++... +. .+++++++|+.++
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dL 790 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEF 790 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSC
T ss_pred HHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhC
Confidence 34444444578899999999999999999753 279999999999999999876532 23 3799999999999
Q ss_pred CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 163 PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 163 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
++++++||+|++..+++|++++.... +++++.++|+|| .+++.+.+
T Consensus 791 p~~d~sFDlVV~~eVLeHL~dp~l~~---------~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 791 DSRLHDVDIGTCLEVIEHMEEDQACE---------FGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CTTSCSCCEEEEESCGGGSCHHHHHH---------HHHHHHHTTCCS-EEEEEECB
T ss_pred CcccCCeeEEEEeCchhhCChHHHHH---------HHHHHHHHcCCC-EEEEEecC
Confidence 99889999999999999999876532 589999999999 77777643
No 105
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.67 E-value=2e-16 Score=131.01 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=85.7
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC---CCCCCCCe
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK---MPFPDNSF 169 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~f 169 (305)
.++++||.+|||+|||+|.++..+++. +.++|+|+|+|+.|++.+++++... .++..+.+|... .++..+++
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceE
Confidence 467899999999999999999999965 5689999999999999998876543 478999998875 34567889
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++.. .+..+... ++.++.+.|||||.+++..
T Consensus 149 DvVf~d~--~~~~~~~~-----------~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 149 DGLYADV--AQPEQAAI-----------VVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEECC--CCTTHHHH-----------HHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEec--cCChhHHH-----------HHHHHHHhccCCCEEEEEE
Confidence 9998642 23233322 6999999999999999864
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.67 E-value=2.4e-16 Score=128.22 Aligned_cols=112 Identities=19% Similarity=0.219 Sum_probs=90.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCCeeEEE
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNSFDAVY 173 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~ 173 (305)
.+.++.+|||+|||+|.++..+++. +.++|+|+|+|+.+++.|++++...++..+++++++|+..++ +.+++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 4567889999999999999999965 457999999999999999999998887668999999998765 5568999999
Q ss_pred ecccccccC------ChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAP------DAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...+.... ..... ..+++++.++|+|||.+++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~--------~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETT--------IQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCcccCcccccccCcccH--------HHHHHHHHHhCcCCCEEEEEE
Confidence 876541111 11100 126999999999999999875
No 107
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=4.9e-16 Score=128.18 Aligned_cols=114 Identities=14% Similarity=0.123 Sum_probs=87.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCCCeeEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDNSFDAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~~~ 175 (305)
.++.+|||||||+|.++..+++ .++.+|+|+|+|+.+++.|++++...++ .++.++++|+..++ +++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 3577999999999999999995 4678999999999999999999988776 47999999998865 677899999875
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+....... ..+....+++++.++|+|||.+++.+
T Consensus 116 ~~~p~~~~~~~~---~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWPKKRHEK---RRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp SCCCCCSGGGGG---GSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCcCccccc---cccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 433222111100 00011236999999999999999865
No 108
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.67 E-value=6.4e-16 Score=127.50 Aligned_cols=114 Identities=15% Similarity=0.128 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCCCeeEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDNSFDAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~~~ 175 (305)
.++.+|||||||+|.++..++.. ++.+|+|+|+|+.+++.|++++...++ .++.++++|+..++ +++++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35789999999999999999954 578999999999999999999988877 58999999999876 777899999988
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+........ .+....+++++.++|+|||.+++..
T Consensus 119 ~~~~~~~~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 119 FSDPWPKKRHEKR---RLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCCCCCSGGGGGG---STTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCccccchhhh---ccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 6533222111000 0011236999999999999998865
No 109
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=4.5e-16 Score=129.58 Aligned_cols=91 Identities=10% Similarity=0.122 Sum_probs=78.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC-CCCCCC-CCCeeEEEecc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF-MKMPFP-DNSFDAVYAIE 176 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~-~~~fD~v~~~~ 176 (305)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ..+++++++|+ ..+|++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 57789999999999999999976 78999999999999999887 24689999999 568887 8899999987
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceE
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEV 213 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~ 213 (305)
.+... +++++.++|+|||.++
T Consensus 119 -----~~~~~-----------~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -----RGPTS-----------VILRLPELAAPDAHFL 139 (226)
T ss_dssp -----SCCSG-----------GGGGHHHHEEEEEEEE
T ss_pred -----CCHHH-----------HHHHHHHHcCCCcEEE
Confidence 23222 6899999999999988
No 110
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.66 E-value=1.9e-16 Score=129.30 Aligned_cols=106 Identities=20% Similarity=0.347 Sum_probs=88.6
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
++++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+. ++.++++|+..+++++++||+|++.
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~-- 101 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSI-- 101 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEE--
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEE--
Confidence 3466 9999999999999999976 78999999999999999999877654 6899999999988888899999985
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+.|++...... +++++.++|+|||.+++.+..
T Consensus 102 ~~~~~~~~~~~---------~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 102 FCHLPSSLRQQ---------LYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp CCCCCHHHHHH---------HHHHHHTTCCSSEEEEEEEEC
T ss_pred hhcCCHHHHHH---------HHHHHHHhcCCCcEEEEEEec
Confidence 34554332222 699999999999999998754
No 111
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.66 E-value=2.7e-16 Score=129.46 Aligned_cols=107 Identities=16% Similarity=0.158 Sum_probs=89.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++... ..+++++++|+..+++++++||+|++..++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 67789999999999999999976334999999999999999988653 247999999999988888899999999888
Q ss_pred cccCC-------------hhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 179 CHAPD-------------AAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 179 ~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++.. ... ..+++++.++|+|||.+++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTV---------DQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHH---------HHHHHHHHHHEEEEEEEEEEES
T ss_pred hhhccccccccccccchhHHH---------HHHHHHHHHhCcCCCEEEEEeC
Confidence 77651 111 1269999999999999999763
No 112
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.66 E-value=7.4e-17 Score=127.87 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=85.8
Q ss_pred CCCCeEEEEcCCCChHHHHHH-hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIA-QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
++..+|||+|||+|.++..++ ..++++|+++|+|+.|++.+++++...|...++++ .|.... .+.++||+|++..+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKM 124 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETC
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhH
Confidence 456799999999999999998 45678999999999999999999998887655655 666543 34688999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.+.+. .+.++.+.|+|||.++-..
T Consensus 125 LHlL~~~~~-----------al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 125 LPVLKQQDV-----------NILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHHHHTTC-----------CHHHHHHTCEEEEEEEEEE
T ss_pred HHhhhhhHH-----------HHHHHHHHhCCCCEEEEeC
Confidence 999943333 5779999999999877654
No 113
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.66 E-value=4.6e-16 Score=131.25 Aligned_cols=108 Identities=24% Similarity=0.344 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCC--ChHHHHHHh--hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CC--CCCe
Q 042544 100 SGQKVLDVGCGI--GGPLREIAQ--FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FP--DNSF 169 (305)
Q Consensus 100 ~~~~vLDiGcG~--G~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~--~~~f 169 (305)
...+|||||||+ +..+..+++ .++++|+++|.|+.|++.|++++...+ ..+++++++|+.+++ .+ .+.|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhccccccccc
Confidence 336899999997 445566653 378999999999999999999876432 246999999998742 11 2445
Q ss_pred e-----EEEecccccccCChhh-hhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 170 D-----AVYAIEATCHAPDAAE-IEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 170 D-----~v~~~~~l~~~~~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
| +|+++.++||+++.+. .. +++++.+.|+|||++++.+.
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~---------~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVG---------IVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHH---------HHHHHHTTSCTTCEEEEEEE
T ss_pred CcCCcchHHhhhhHhcCCchhhHHH---------HHHHHHHhCCCCcEEEEEec
Confidence 5 6888999999998642 11 69999999999999999863
No 114
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.66 E-value=1.3e-15 Score=130.37 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCC---ChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----------C
Q 042544 100 SGQKVLDVGCGI---GGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----------F 164 (305)
Q Consensus 100 ~~~~vLDiGcG~---G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----------~ 164 (305)
...+|||||||+ |.++..+++ .++.+|+++|+|+.|++.|++++.. ..+++++++|+.+.+ +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 988776664 3678999999999999999998743 357999999997521 2
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+.++||+|++..++||+++..... +++++.++|+|||.+++.+.
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~~~~---------~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDVVDR---------VVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTTHHH---------HHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCEEEEEechhhhCCcHHHHH---------HHHHHHHhCCCCcEEEEEEe
Confidence 335899999999999999853322 69999999999999999874
No 115
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.65 E-value=3.8e-16 Score=138.36 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=96.6
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+.+...+...++.+|||||||+|.++..+++....+|+|+|+|+ |++.|+++++..++.++++++++|+.+++++ ++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~ 116 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQ 116 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SC
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-Cc
Confidence 344555556668899999999999999999876456999999996 8899999998888877899999999988765 67
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++..+++|+....... .+.++.++|+|||.+++..
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~---------~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLE---------SYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHH---------HHHHGGGGEEEEEEEESCE
T ss_pred eeEEEEeCchhcCChHHHHH---------HHHHHHhhcCCCeEEEEec
Confidence 99999998888887554322 5778899999999988643
No 116
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.65 E-value=5.9e-16 Score=138.45 Aligned_cols=118 Identities=15% Similarity=0.091 Sum_probs=94.7
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+.+...+.+.++.+|||||||+|.++..+++....+|+|+|+| .|++.|++++...++.++++++++|+.+++++ ++
T Consensus 52 ~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 129 (376)
T 3r0q_C 52 FNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EK 129 (376)
T ss_dssp HHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SC
T ss_pred HHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-Cc
Confidence 34444455667889999999999999999997633499999999 99999999999988888899999999998876 88
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++..+.+++...... ..++.++.++|+|||.+++..
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~--------~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMF--------DSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEEEEECCCBTTBTTTCTH--------HHHHHHHHHHEEEEEEEESSE
T ss_pred ceEEEEcChhhcccchHHH--------HHHHHHHHhhCCCCeEEEEec
Confidence 9999996655555322111 115888899999999987754
No 117
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.65 E-value=3.9e-16 Score=132.65 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=92.3
Q ss_pred HHHHcCCC-CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCCC
Q 042544 92 LALQLGLK-SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDNS 168 (305)
Q Consensus 92 l~~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~ 168 (305)
+...+.+. ++.+|||+|||+|.++..++.....+|+|+|+++.+++.|++++...++.++++++++|+.+++ +++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 44466777 8899999999999999999976455999999999999999999999888878999999998864 55789
Q ss_pred eeEEEeccccccc-----CChhhh-hhcCC---CCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHA-----PDAAEI-EIGDG---LPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~-----~~~~~~-~~~~~---~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|+++..+... ..+... ..... .....+++.+.++|+|||.+++..
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 9999996544322 111000 00000 000126889999999999999853
No 118
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.65 E-value=1.3e-15 Score=136.20 Aligned_cols=172 Identities=16% Similarity=0.122 Sum_probs=117.8
Q ss_pred HHHHHcC-CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 91 FLALQLG-LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 91 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+...++ +.++.+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ ..+++++.+|+.+ ++++
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~-~~~~-- 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-------LSGIEHVGGDMFA-SVPQ-- 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTT-CCCC--
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-------cCCCEEEeCCccc-CCCC--
Confidence 3444454 66778999999999999999995 46789999999 999887654 1469999999987 6664
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHH
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGR 248 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 248 (305)
||+|++..++||++++.... ++++++++|+|||.+++.+.........++ ......
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~---------~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~---------------~~~~~~ 323 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIE---------FLSNCHKALSPNGKVIIVEFILPEEPNTSE---------------ESKLVS 323 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHH---------HHHHHHHHEEEEEEEEEEEEEECSSCCSSH---------------HHHHHH
T ss_pred CCEEEEecccccCCHHHHHH---------HHHHHHHhcCCCCEEEEEEeccCCCCccch---------------HHHHHH
Confidence 99999999999999887433 699999999999999998755432110000 000011
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 249 FVTRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
....... . ..+-...+.+++..+++++||..+..... ...+..++.++|
T Consensus 324 ~~d~~~~--~-~~~~~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~vie~~~ 372 (372)
T 1fp1_D 324 TLDNLMF--I-TVGGRERTEKQYEKLSKLSGFSKFQVACR-AFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHHH--H-HHSCCCEEHHHHHHHHHHTTCSEEEEEEE-ETTTEEEEEEEC
T ss_pred HhhHHHH--h-ccCCccCCHHHHHHHHHHCCCceEEEEEc-CCCCeEEEEEeC
Confidence 1111111 0 12234456789999999999988773321 112135666664
No 119
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.65 E-value=9.9e-16 Score=128.67 Aligned_cols=103 Identities=22% Similarity=0.266 Sum_probs=86.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC---CCCeeEEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP---DNSFDAVY 173 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~ 173 (305)
+.++.+|||||||+|..+..++. .++.+|+|+|+|+.|++.|++++...++. +++++++|+.+++++ +++||+|+
T Consensus 68 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 68 FNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred cCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEE
Confidence 35778999999999999999984 46789999999999999999999888875 599999999887653 57899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+..+ .+... +++++.++|+|||.+++..
T Consensus 147 ~~~~----~~~~~-----------~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 147 ARAV----ARLSV-----------LSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EECC----SCHHH-----------HHHHHGGGEEEEEEEEEEE
T ss_pred Eecc----CCHHH-----------HHHHHHHhcCCCCEEEEEe
Confidence 8762 33333 5899999999999998853
No 120
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.64 E-value=8.9e-16 Score=134.87 Aligned_cols=109 Identities=19% Similarity=0.195 Sum_probs=88.4
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
.+.++.+|||||||+|.++..+++....+|+|+|+| .|++.|++++...++.++++++++|+.++++++++||+|++..
T Consensus 35 ~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 35 DLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred hhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 345678999999999999999987644699999999 5999999999988887789999999999888878999999976
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
+.+++...... ..++.++.++|+|||.++.
T Consensus 114 ~~~~l~~~~~~--------~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 114 MGYFLLYESMM--------DTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CBTTBSTTCCH--------HHHHHHHHHHEEEEEEEES
T ss_pred chhhcccHHHH--------HHHHHHHHhhcCCCeEEEE
Confidence 54443322111 1158888999999999874
No 121
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.64 E-value=4.4e-16 Score=136.01 Aligned_cols=112 Identities=19% Similarity=0.184 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC------CCCCeEEEEcCCCCCC----CC--C
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG------VDKTCNFVKADFMKMP----FP--D 166 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~~~~~~~~~d~~~~~----~~--~ 166 (305)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.|+++....+ ...+++++++|+..++ ++ +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 4678999999999999999987557899999999999999999876542 2236899999999875 53 4
Q ss_pred CCeeEEEeccccccc-CChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 167 NSFDAVYAIEATCHA-PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
++||+|++..+++|+ .+.... ..+++++.++|+|||.+++...+
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~--------~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQA--------DMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHH--------HHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHH--------HHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999999998 443221 12699999999999999998753
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=2.3e-15 Score=127.52 Aligned_cols=109 Identities=20% Similarity=0.296 Sum_probs=93.9
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+...+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++...++.++++++++|+.+. +++++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 162 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEEN 162 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCS
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCC
Confidence 4555778889999999999999999999965 47899999999999999999999888876799999999864 66788
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++ +.+++.. +++++.++|+|||.+++..
T Consensus 163 ~D~v~~-----~~~~~~~-----------~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 163 VDHVIL-----DLPQPER-----------VVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp EEEEEE-----CSSCGGG-----------GHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEE-----CCCCHHH-----------HHHHHHHHcCCCCEEEEEE
Confidence 999987 4455543 6999999999999999865
No 123
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.64 E-value=2.2e-15 Score=129.25 Aligned_cols=123 Identities=13% Similarity=0.241 Sum_probs=89.1
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
+.+...+. .++.+|||+|||+|..+..++. .++.+|+|+|+|+.+++.+++++...+.. +++++++|+... +++++
T Consensus 100 ~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~-~~~~~ 176 (276)
T 2b3t_A 100 EQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSA-LAGQQ 176 (276)
T ss_dssp HHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGG-GTTCC
T ss_pred HHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhh-cccCC
Confidence 34444444 5678999999999999999994 46789999999999999999999888765 799999999873 44678
Q ss_pred eeEEEecc-------------cccccCChhhhhhcCCCC-CcccHHHHHHHHHhCCceEEE
Q 042544 169 FDAVYAIE-------------ATCHAPDAAEIEIGDGLP-DIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 169 fD~v~~~~-------------~l~~~~~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~~~i~ 215 (305)
||+|++.. +++|.|......-..++. ...+++++.++|+|||.+++.
T Consensus 177 fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 177 FAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp EEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999973 333333221100000000 012578888999999999885
No 124
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.63 E-value=1.4e-15 Score=126.79 Aligned_cols=107 Identities=24% Similarity=0.254 Sum_probs=89.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
..+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++....+ +++++++|+.....++++|
T Consensus 60 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 60 IFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCc
Confidence 34555677788999999999999999999976 5899999999999999999886554 6999999998732246789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|+|++..+++|++ .++.++|+|||.+++...
T Consensus 136 D~v~~~~~~~~~~-----------------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 136 DRVVVWATAPTLL-----------------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EEEEESSBBSSCC-----------------HHHHHTEEEEEEEEEEEC
T ss_pred cEEEECCcHHHHH-----------------HHHHHHcCCCcEEEEEEc
Confidence 9999999988755 347789999999999864
No 125
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.63 E-value=1.8e-15 Score=129.70 Aligned_cols=108 Identities=19% Similarity=0.324 Sum_probs=89.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhc-CCCCCeEEEEcCCCCCCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFA-GVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 167 (305)
.+...+.+.++.+|||+|||+|.++..+++. ++.+|+|+|+++.+++.|++++... +. .+++++++|+.+ +++++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCSC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcCC
Confidence 4445667888999999999999999999964 4789999999999999999998876 63 479999999987 56678
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|++ +++++.. +++++.++|+|||.+++.+
T Consensus 179 ~fD~Vi~-----~~~~~~~-----------~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 179 MYDAVIA-----DIPDPWN-----------HVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp CEEEEEE-----CCSCGGG-----------SHHHHHHTEEEEEEEEEEE
T ss_pred CccEEEE-----cCcCHHH-----------HHHHHHHHcCCCCEEEEEe
Confidence 8999997 5666544 6999999999999999976
No 126
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.63 E-value=5e-15 Score=122.93 Aligned_cols=154 Identities=15% Similarity=0.077 Sum_probs=102.0
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC---CCCCCee
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP---FPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD 170 (305)
+.+.++.+|||+|||+|.++..+++. +.++|+|+|+|+.|++...+.+... .++.++++|+.... ...++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 34789999999999999999999964 4679999999999976554444332 47999999997632 1246899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHH
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFV 250 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 250 (305)
+|++..+. ++.... +...+.+.|||||.+++....-. ..+ ...+.
T Consensus 149 ~I~~d~a~---~~~~~i----------l~~~~~~~LkpGG~lvisik~~~----~d~--t~~~~---------------- 193 (232)
T 3id6_C 149 VLYVDIAQ---PDQTDI----------AIYNAKFFLKVNGDMLLVIKARS----IDV--TKDPK---------------- 193 (232)
T ss_dssp EEEECCCC---TTHHHH----------HHHHHHHHEEEEEEEEEEEC-------------CCSS----------------
T ss_pred EEEecCCC---hhHHHH----------HHHHHHHhCCCCeEEEEEEccCC----ccc--CCCHH----------------
Confidence 99987543 333221 34556669999999999742110 000 00000
Q ss_pred HHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCccccccc-ceEEEEEcC
Q 042544 251 TRNMVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTP-MYFFLARKP 302 (305)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~arKp 302 (305)
....+....+++.+|++.+......|.. .++++|+|+
T Consensus 194 ---------------e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 194 ---------------EIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp ---------------SSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred ---------------HHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 0012455677777888877655555533 457888875
No 127
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.63 E-value=6.3e-16 Score=128.18 Aligned_cols=116 Identities=15% Similarity=0.140 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCC-CCeEEEEcCCCCC-
Q 042544 87 RHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVD-KTCNFVKADFMKM- 162 (305)
Q Consensus 87 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~- 162 (305)
.....+....+..++.+|||||||+|..+..+++. ++++|+++|+|+.+++.|++++...++. ++++++++|+.+.
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHG
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHH
Confidence 34444555555555669999999999999999964 3689999999999999999999998887 7899999998763
Q ss_pred C-CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 163 P-FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 163 ~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+ +++++||+|++.....+ ... +++++.++|+|||.+++.+
T Consensus 123 ~~~~~~~fD~V~~d~~~~~---~~~-----------~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSPMD---LKA-----------LVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp GGSCTTCEEEEEECCCTTT---HHH-----------HHHHHHHHEEEEEEEEETT
T ss_pred HHhcCCCcCeEEEcCcHHH---HHH-----------HHHHHHHHcCCCcEEEEeC
Confidence 2 34688999997643221 111 5899999999999998844
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.63 E-value=4.4e-15 Score=125.82 Aligned_cols=109 Identities=19% Similarity=0.228 Sum_probs=93.3
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhc-CCCCCeEEEEcCCCCCCCCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFA-GVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~~~~~ 167 (305)
.+...+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++... + ..+++++++|+.+.+++++
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCCCTT
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCCCCC
Confidence 4555677889999999999999999999965 3689999999999999999998876 6 4579999999998878788
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|++ +.+++.. +++++.++|+|||.+++..
T Consensus 166 ~~D~v~~-----~~~~~~~-----------~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 166 AYDGVAL-----DLMEPWK-----------VLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CEEEEEE-----ESSCGGG-----------GHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEE-----CCcCHHH-----------HHHHHHHhCCCCCEEEEEe
Confidence 9999997 3455533 6999999999999999976
No 129
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.63 E-value=3.2e-17 Score=137.77 Aligned_cols=103 Identities=19% Similarity=0.277 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++..+++++++|+.+++ ++++||+|++...+
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 36789999999999999999976 69999999999999999999998887668999999998866 56789999999888
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
++..+... .+.++.++|+|||.+++
T Consensus 155 ~~~~~~~~-----------~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 155 GGPDYATA-----------ETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SSGGGGGS-----------SSBCTTTSCSSCHHHHH
T ss_pred CCcchhhh-----------HHHHHHhhcCCcceeHH
Confidence 88766543 23445566666666444
No 130
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.62 E-value=2.9e-15 Score=124.84 Aligned_cols=119 Identities=16% Similarity=0.228 Sum_probs=87.7
Q ss_pred cCCCCCCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCCCCCeeEEE
Q 042544 96 LGLKSGQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFPDNSFDAVY 173 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~ 173 (305)
..++++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|++++...+. +++++++|+..+ ++++++||+|+
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEE
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEE
Confidence 345688999999999 99999999965478999999999999999999988876 699999997542 45578999999
Q ss_pred ecccccccCChhhhh----hcCCCC----CcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIE----IGDGLP----DIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~----~~~~~~----~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...+.+.++..... +..+.. ...+++++.++|+|||.+++..
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 887665544321100 000000 0226889999999999998864
No 131
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=3.2e-15 Score=119.67 Aligned_cols=107 Identities=20% Similarity=0.215 Sum_probs=89.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
..+...+.+.++.+|||+|||+|.++..+++ ++.+|+|+|+|+.+++.+++++...++ .+++++++|+.+ ++++++|
T Consensus 25 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~~~~~~ 101 (183)
T 2yxd_A 25 AVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VLDKLEF 101 (183)
T ss_dssp HHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HGGGCCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cccCCCC
Confidence 3445566777889999999999999999998 688999999999999999999988876 479999999987 6666789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++..+ .+... +++++.++ |||.+++..
T Consensus 102 D~i~~~~~----~~~~~-----------~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 102 NKAFIGGT----KNIEK-----------IIEILDKK--KINHIVANT 131 (183)
T ss_dssp SEEEECSC----SCHHH-----------HHHHHHHT--TCCEEEEEE
T ss_pred cEEEECCc----ccHHH-----------HHHHHhhC--CCCEEEEEe
Confidence 99999887 23322 57778777 999999875
No 132
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=1.1e-15 Score=123.41 Aligned_cols=111 Identities=18% Similarity=0.201 Sum_probs=92.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-CC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD-NS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~ 168 (305)
..+...+.+.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.+++++...+...++.++++|+.+ ++++ ++
T Consensus 23 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 100 (192)
T 1l3i_A 23 CLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPD 100 (192)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCC
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCC
Confidence 344455677889999999999999999999763 89999999999999999999888775689999999876 2333 58
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|++..+++++ .. +++++.++|+|||.+++..
T Consensus 101 ~D~v~~~~~~~~~---~~-----------~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 101 IDIAVVGGSGGEL---QE-----------ILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEEEEESCCTTCH---HH-----------HHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCchHHH---HH-----------HHHHHHHhcCCCcEEEEEe
Confidence 9999998776543 22 5999999999999999865
No 133
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.62 E-value=4e-16 Score=127.51 Aligned_cols=108 Identities=14% Similarity=0.019 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCC-CCeEEEEcCCCCCC--CCCCC-eeEEEec
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVD-KTCNFVKADFMKMP--FPDNS-FDAVYAI 175 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~--~~~~~-fD~v~~~ 175 (305)
++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|++++...++. ++++++++|+.++. .++++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 57899999999999999877653469999999999999999999888763 57999999987642 23678 9999987
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHH--HHHHHhCCceEEEeccC
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKC--LEALKQAGFEVIWEKDL 219 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~~~i~~~~~ 219 (305)
..++ ..+... .++.+ .++|+|||.+++.....
T Consensus 133 ~~~~-~~~~~~-----------~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-FNLAEQ-----------AISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-SCHHHH-----------HHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-CccHHH-----------HHHHHHhcCccCCCcEEEEEECCC
Confidence 7643 333222 46677 45699999999876543
No 134
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.62 E-value=1.4e-15 Score=135.08 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=112.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
+.++.+|||||||+|.++..+++ .++.+++++|+ +.+++.+++ . .+++++.+|+.+ ++++ ||+|++..
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p~--~D~v~~~~ 254 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIPN--ADAVLLKY 254 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCCC--CSEEEEES
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCCC--ccEEEeeh
Confidence 45678999999999999999995 46789999999 999987654 1 359999999976 5653 99999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHh---CCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHH
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQ---AGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRN 253 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 253 (305)
++||+++..... ++++++++|+| ||.+++.+.........+ ............
T Consensus 255 ~lh~~~d~~~~~---------~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~---------------~~~~~~~~~d~~ 310 (352)
T 1fp2_A 255 ILHNWTDKDCLR---------ILKKCKEAVTNDGKRGKVTIIDMVIDKKKDEN---------------QVTQIKLLMDVN 310 (352)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHHSGGGCCCEEEEEECEECTTTSCH---------------HHHHHHHHHHHH
T ss_pred hhccCCHHHHHH---------HHHHHHHhCCCCCCCcEEEEEEeecCCCCCcc---------------chhhhHhhccHH
Confidence 999999887433 69999999999 999999875433211000 000011111100
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 254 MVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
.. . ..-...+.+++..+++++||..+.... ......++.++|
T Consensus 311 ~~---~-~~g~~~t~~e~~~ll~~aGf~~~~~~~--~~~~~~vie~~~ 352 (352)
T 1fp2_A 311 MA---C-LNGKERNEEEWKKLFIEAGFQHYKISP--LTGFLSLIEIYP 352 (352)
T ss_dssp GG---G-GTCCCEEHHHHHHHHHHTTCCEEEEEE--EETTEEEEEEEC
T ss_pred HH---h-ccCCCCCHHHHHHHHHHCCCCeeEEEe--cCCCcEEEEEeC
Confidence 00 0 112234568999999999998877332 233345666654
No 135
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.62 E-value=2.7e-16 Score=125.70 Aligned_cols=116 Identities=14% Similarity=0.124 Sum_probs=89.2
Q ss_pred HHHHHcC-CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCCCCC
Q 042544 91 FLALQLG-LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFPDNS 168 (305)
Q Consensus 91 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 168 (305)
.+...+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|++++...++.++++++++|+.+ ++..+++
T Consensus 21 ~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 100 (177)
T 2esr_A 21 AIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGR 100 (177)
T ss_dssp HHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSC
T ss_pred HHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCC
Confidence 3333444 5678899999999999999999765579999999999999999999888776689999999977 3433467
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHH--HHHHhCCceEEEecc
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCL--EALKQAGFEVIWEKD 218 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~~~i~~~~ 218 (305)
||+|++...++. ..... .++.+. ++|+|||.+++....
T Consensus 101 fD~i~~~~~~~~-~~~~~-----------~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 101 FDLVFLDPPYAK-ETIVA-----------TIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EEEEEECCSSHH-HHHHH-----------HHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCEEEECCCCCc-chHHH-----------HHHHHHhCCCcCCCcEEEEEECC
Confidence 999998765432 11111 366665 889999999997643
No 136
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.62 E-value=7.6e-15 Score=123.83 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC---CCCeeEEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP---DNSFDAVY 173 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~fD~v~ 173 (305)
..++.+|||||||+|..+..++. .++.+|+++|+|+.+++.|++++...++. +++++++|+++++.. +++||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEE
Confidence 35678999999999999999995 46889999999999999999999988875 599999999886542 47899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+..+ .+... +++.+.++|+|||.+++..
T Consensus 157 s~a~----~~~~~-----------ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 157 ARAV----APLCV-----------LSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESS----CCHHH-----------HHHHHGGGEEEEEEEEEEE
T ss_pred ECCc----CCHHH-----------HHHHHHHHcCCCeEEEEEe
Confidence 8653 23322 5888999999999988754
No 137
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.62 E-value=3.4e-16 Score=130.87 Aligned_cols=107 Identities=16% Similarity=0.252 Sum_probs=87.2
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-CCCCCeeEE
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-FPDNSFDAV 172 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~fD~v 172 (305)
+...++.+|||||||+|..+..++.. ++.+|+++|+|+.+++.|++++...++.++++++++|+.+. + ..+++||+|
T Consensus 67 ~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 67 IRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred HhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEE
Confidence 33446789999999999999999963 47899999999999999999999888877899999999773 3 336889999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++..... .... +++++.++|+|||.+++..
T Consensus 147 ~~~~~~~---~~~~-----------~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDAAKA---QSKK-----------FFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEETTSS---SHHH-----------HHHHHGGGEEEEEEEEEEC
T ss_pred EEcCcHH---HHHH-----------HHHHHHHhcCCCeEEEEee
Confidence 9764322 2211 5899999999999998854
No 138
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.62 E-value=2.5e-15 Score=123.54 Aligned_cols=104 Identities=19% Similarity=0.150 Sum_probs=79.6
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC----CCCCCCee
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM----PFPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~fD 170 (305)
+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.+.++.. .++.++++|+... +++ ++||
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-ccee
Confidence 45678899999999999999999865 3479999999999887766655542 3688999998763 444 7899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.. .. ++... .+++++.++|||||.+++..
T Consensus 129 ~V~~~~-~~--~~~~~----------~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDI-AQ--KNQIE----------ILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECC-CS--TTHHH----------HHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEec-cC--hhHHH----------HHHHHHHHHhCCCCEEEEEE
Confidence 999862 11 11111 14899999999999999874
No 139
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.62 E-value=4.7e-15 Score=127.31 Aligned_cols=111 Identities=15% Similarity=0.192 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhc-C-CCCCeEEEEcCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFA-G-VDKTCNFVKADFMKMPFP 165 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~-~-~~~~~~~~~~d~~~~~~~ 165 (305)
..+...+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++... + +..+++++++|+.+.+++
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~ 168 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP 168 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence 34455677889999999999999999999964 4689999999999999999998776 4 445799999999988777
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++||+|++ +.+++.. +++++.++|+|||.+++..
T Consensus 169 ~~~~D~v~~-----~~~~~~~-----------~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 169 DGSVDRAVL-----DMLAPWE-----------VLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp TTCEEEEEE-----ESSCGGG-----------GHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEE-----CCcCHHH-----------HHHHHHHhCCCCCEEEEEe
Confidence 889999997 3445433 6999999999999999976
No 140
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.62 E-value=2.6e-15 Score=133.95 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=93.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCC--CeEEEEcCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDK--TCNFVKADFMKMPFPD 166 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~--~~~~~~~d~~~~~~~~ 166 (305)
..+...+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.+++++...++.. +++++++|+.+ ++++
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~ 290 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEP 290 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCC
Confidence 34555666667789999999999999999954 57899999999999999999998877543 57889999987 5667
Q ss_pred CCeeEEEecccccccC---ChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAP---DAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++...+++.. +.... .+++++.++|+|||.+++..
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~---------~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAW---------EMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHH---------HHHHHHHHHEEEEEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHH---------HHHHHHHHhCCCCcEEEEEE
Confidence 8999999998877532 22111 25899999999999999965
No 141
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=6.6e-16 Score=126.47 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=86.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|++++...+... ++++++|+.+. .+++||+|++...
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~--~~~~fD~i~~~~~ 134 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLAD--VDGKFDLIVANIL 134 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTT--CCSCEEEEEEESC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEecccccc--CCCCceEEEECCc
Confidence 45788999999999999999987655699999999999999999998887754 99999999764 3588999999887
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++++. . +++++.++|+|||.+++.+
T Consensus 135 ~~~~~---~-----------~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 135 AEILL---D-----------LIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp HHHHH---H-----------HGGGSGGGEEEEEEEEEEE
T ss_pred HHHHH---H-----------HHHHHHHhcCCCCEEEEEe
Confidence 76542 1 5888999999999999864
No 142
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=127.43 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHh------cCCCCCeEEEEcCCCC-CC--CCCCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRF------AGVDKTCNFVKADFMK-MP--FPDNS 168 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~------~~~~~~~~~~~~d~~~-~~--~~~~~ 168 (305)
.++.+|||||||+|.++..+++ .++..|+|+|+|+.|++.|++++.. .+. .++.++++|+.. ++ +++++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 4667999999999999999995 4678999999999999999987654 233 479999999987 66 77899
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||.|++...-.+...... ...+....+++++.++|+|||.+++.+
T Consensus 124 ~D~v~~~~~dp~~k~~h~---krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKH---KWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEEEESCC--------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhh---hhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 999986543222111000 000011236999999999999999875
No 143
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.62 E-value=2e-15 Score=132.11 Aligned_cols=111 Identities=17% Similarity=0.210 Sum_probs=93.2
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD 166 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (305)
...+...+.+.++.+|||||||+|.++..+++. . ..+|+|+|+|+.+++.|++++...+.. +++++++|+.+.+.++
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccC
Confidence 345566778889999999999999999999964 2 357999999999999999999888775 5999999998855456
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++||+|++..+++|++ +++.+.|+|||.+++...
T Consensus 143 ~~fD~Iv~~~~~~~~~-----------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP-----------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CCEEEEEECSBBSCCC-----------------HHHHHHEEEEEEEEEEBC
T ss_pred CCeEEEEEcCCHHHHH-----------------HHHHHhcCCCcEEEEEEC
Confidence 7899999999998765 346789999999999754
No 144
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=3.2e-15 Score=123.24 Aligned_cols=110 Identities=22% Similarity=0.230 Sum_probs=90.4
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcC--CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSS--TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
..+...+.+.++.+|||||||+|.++..+++..+ .+|+++|+|+.+++.+++++...+.. +++++++|+......++
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGGGC
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCCCC
Confidence 3445566778899999999999999999996533 89999999999999999998877764 59999999865322257
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+||+|++..+++|++ +++.++|+|||.+++...
T Consensus 146 ~fD~v~~~~~~~~~~-----------------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP-----------------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp CEEEEEESSBBSSCC-----------------HHHHHTEEEEEEEEEEES
T ss_pred CeeEEEECCchHHHH-----------------HHHHHHcCCCcEEEEEEC
Confidence 899999999988755 357889999999999763
No 145
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.61 E-value=7.2e-16 Score=124.16 Aligned_cols=110 Identities=16% Similarity=0.052 Sum_probs=86.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEE
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAV 172 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v 172 (305)
...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.++++++++|+.+.. .++++||+|
T Consensus 41 ~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i 120 (187)
T 2fhp_A 41 PYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLV 120 (187)
T ss_dssp SCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEE
Confidence 3457789999999999999998876557999999999999999999988877668999999987621 226789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHH--HHHHHhCCceEEEecc
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKC--LEALKQAGFEVIWEKD 218 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~~~i~~~~ 218 (305)
++...++ ...... .+..+ .++|+|||.+++....
T Consensus 121 ~~~~~~~-~~~~~~-----------~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 121 LLDPPYA-KQEIVS-----------QLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EECCCGG-GCCHHH-----------HHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCC-chhHHH-----------HHHHHHHhcccCCCCEEEEEeCC
Confidence 9987644 222222 35555 7789999999987644
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=4.1e-16 Score=129.37 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCC-C----CCCee
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPF-P----DNSFD 170 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~-~----~~~fD 170 (305)
.++.+|||||||+|..+..+++. ++++|+++|+++.+++.|++++...++.++++++++|+.+ ++. + .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999964 3789999999999999999999988887789999999855 222 2 26899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++....++..+... .+..+ ++|+|||.+++.+
T Consensus 137 ~V~~d~~~~~~~~~~~-----------~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTL-----------LLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp EEEECSCGGGHHHHHH-----------HHHHT-TCCCTTCEEEESC
T ss_pred EEEEcCCcccchHHHH-----------HHHhc-cccCCCeEEEEeC
Confidence 9998876666544322 36666 8999999998854
No 147
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.61 E-value=8.7e-16 Score=127.00 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=83.7
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHH----HhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELN----RFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
+.+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.+.+.+ ...+. ++++++++|+.++|+++++ |
T Consensus 23 l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 23 LRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp HHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-E
T ss_pred hhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-C
Confidence 34568889999999999999999954 5789999999999998643332 23333 3799999999999987766 7
Q ss_pred EEEecc---cc--cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIE---AT--CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~---~l--~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.|+... .. +|++++.. +++++.++|||||.+++..
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPE-----------MLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSH-----------HHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEccchhhhhhhhccHHH-----------HHHHHHHHcCCCcEEEEEe
Confidence 776333 22 26666644 6999999999999999854
No 148
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.61 E-value=1.4e-15 Score=139.84 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=96.5
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 88 HEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 88 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
+.+.+...+...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++++|+.+++++ +
T Consensus 146 ~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~ 223 (480)
T 3b3j_A 146 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-E 223 (480)
T ss_dssp HHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-S
T ss_pred HHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-C
Confidence 3444555555567889999999999999999876567999999998 9999999999888877899999999987765 5
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+||+|++..+++|+.+..... .+.++.++|+|||.+++.
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~---------~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLE---------SYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHH---------HHHHGGGGEEEEEEEESC
T ss_pred CeEEEEEeCchHhcCcHHHHH---------HHHHHHHhcCCCCEEEEE
Confidence 899999988878776654432 577888999999998853
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.61 E-value=3.1e-15 Score=122.53 Aligned_cols=100 Identities=16% Similarity=0.223 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
++.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.+++++...+.. +++++++|+.+.+ ++++||+|++..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFP-SEPPFDGVISRAF- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSC-CCSCEEEEECSCS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCC-ccCCcCEEEEecc-
Confidence 4789999999999999999954 6789999999999999999999887765 4999999998865 4578999997542
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+... +++++.++|+|||.+++..
T Consensus 142 ---~~~~~-----------~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 142 ---ASLND-----------MVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ---SSHHH-----------HHHHHTTSEEEEEEEEEEE
T ss_pred ---CCHHH-----------HHHHHHHhcCCCcEEEEEe
Confidence 33322 5899999999999999864
No 150
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=1.4e-15 Score=124.43 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCCCCCeeEEEecccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 178 (305)
++.+|||+|||+|.++..++.....+|+|+|+|+.|++.|++++...++ .+++++++|+.+ ++..+++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 5789999999999999987765346999999999999999999988877 579999999877 45556789999987663
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHH--HHHhCCceEEEecc
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLE--ALKQAGFEVIWEKD 218 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~~~i~~~~ 218 (305)
+ ...... .++.+.+ +|+|||.+++....
T Consensus 133 ~-~~~~~~-----------~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RGLLEE-----------TINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-TTTHHH-----------HHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-CCcHHH-----------HHHHHHhcCccCCCcEEEEEECC
Confidence 3 333222 4666765 49999999987654
No 151
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.61 E-value=4.5e-15 Score=132.54 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=90.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...+.. ++++++|+.+.+.++++||+|++...+
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~~~~~fD~Ii~npp~ 308 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALTEEARFDIIVTNPPF 308 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSCTTCCEEEEEECCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccccCCCeEEEEECCch
Confidence 46789999999999999999976 789999999999999999999887754 899999999877666899999999888
Q ss_pred cccC---ChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 179 CHAP---DAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 179 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.. ..... .+++++.++|+|||.+++..
T Consensus 309 ~~~~~~~~~~~~---------~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 309 HVGGAVILDVAQ---------AFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CTTCSSCCHHHH---------HHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccccHHHHH---------HHHHHHHHhcCcCcEEEEEE
Confidence 8732 22211 26899999999999999975
No 152
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=1.9e-15 Score=128.46 Aligned_cols=125 Identities=16% Similarity=0.094 Sum_probs=90.2
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHh---cCCCCCeEEEEcCCCCC-----
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRF---AGVDKTCNFVKADFMKM----- 162 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~----- 162 (305)
+...+...++.+|||+|||+|.++..++.. ++.+|+|+|+++.+++.|++++.. .++.++++++++|+.++
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARV 107 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHH
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhh
Confidence 334556677889999999999999999964 468999999999999999999887 77766799999999886
Q ss_pred --CCCCCCeeEEEecccccccCC---hhh---hhh-cCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 163 --PFPDNSFDAVYAIEATCHAPD---AAE---IEI-GDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 163 --~~~~~~fD~v~~~~~l~~~~~---~~~---~~~-~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++++++||+|++.-.+..... +.. ... ........+++.+.++|+|||.+++..
T Consensus 108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 356789999999743322110 000 000 000001126888999999999998854
No 153
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.60 E-value=2.4e-15 Score=141.53 Aligned_cols=109 Identities=18% Similarity=0.252 Sum_probs=92.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEeccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYAIEA 177 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~~~ 177 (305)
.+.+|||||||+|.++..||+. |++|+|||+|+.+++.|+..+...+. .+++|.+++++++ ++++++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 4579999999999999999986 89999999999999999998877653 2699999999886 456789999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
++|++++.... .+..+.+.|+++|..++.....
T Consensus 144 ~ehv~~~~~~~---------~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIVHLHGID---------EVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHHCHH---------HHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCCCHHHHH---------HHHHHHHHhccccceeeEEecc
Confidence 99999886532 3566788899999877765443
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.60 E-value=1.2e-15 Score=128.84 Aligned_cols=105 Identities=14% Similarity=0.152 Sum_probs=85.4
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCC--CCCeeEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFP--DNSFDAV 172 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~--~~~fD~v 172 (305)
..++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++++|+.+ ++.. .++||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 346789999999999999999964 3 689999999999999999999998887789999999876 3322 3489999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++..... +.. .+++++.++|+|||.+++.+
T Consensus 141 ~~d~~~~---~~~-----------~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 141 FIDADKP---NNP-----------HYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EECSCGG---GHH-----------HHHHHHHHTCCTTCEEEEEC
T ss_pred EECCchH---HHH-----------HHHHHHHHhcCCCeEEEEeC
Confidence 9854311 111 15999999999999988865
No 155
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.60 E-value=1.8e-14 Score=121.32 Aligned_cols=109 Identities=19% Similarity=0.293 Sum_probs=92.7
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
.+...+.+.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++....++..+++++++|+.+...++++||
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 4455677788999999999999999999977 889999999999999999999888776789999999988543567899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++ +.+++.. +++++.++|+|||.+++..
T Consensus 161 ~v~~-----~~~~~~~-----------~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 161 AAFV-----DVREPWH-----------YLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp EEEE-----CSSCGGG-----------GHHHHHHHBCTTCEEEEEE
T ss_pred EEEE-----CCcCHHH-----------HHHHHHHHcCCCCEEEEEe
Confidence 9997 3444433 6999999999999999976
No 156
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.60 E-value=4.8e-15 Score=133.53 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=91.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHH-------HHHHHhcCCC-CCeEEEEcCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRG-------KELNRFAGVD-KTCNFVKADFM 160 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a-------~~~~~~~~~~-~~~~~~~~d~~ 160 (305)
..++..+.+.++.+|||||||+|.++..++.. +..+|+|+|+++.+++.| ++++...|+. .+++++++|..
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCS
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcc
Confidence 44555678889999999999999999999964 446899999999999988 8888877743 58999998654
Q ss_pred CC--CC--CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 161 KM--PF--PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 161 ~~--~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
.. ++ ..++||+|++..++ +.++... .+.++.+.|+|||.+++.+...
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~-----------~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNFL-FDEDLNK-----------KVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCTT-CCHHHHH-----------HHHHHHTTCCTTCEEEESSCSS
T ss_pred ccccccccccCCCCEEEEeCcc-ccccHHH-----------HHHHHHHhCCCCeEEEEeeccC
Confidence 32 12 24689999987665 3343333 5889999999999999875433
No 157
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=5.3e-15 Score=126.93 Aligned_cols=104 Identities=18% Similarity=0.152 Sum_probs=87.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|++++...++.++++++++|+.+++. +++||+|++...
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 3568899999999999999999763337999999999999999999988887779999999998765 688999988432
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
.... .++.++.++|+|||.+++.+.
T Consensus 202 ----~~~~-----------~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 202 ----VRTH-----------EFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ----SSGG-----------GGHHHHHHHEEEEEEEEEEEE
T ss_pred ----hhHH-----------HHHHHHHHHCCCCeEEEEEEe
Confidence 1111 269999999999999998763
No 158
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.59 E-value=6e-15 Score=122.59 Aligned_cols=103 Identities=20% Similarity=0.182 Sum_probs=86.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhc--CCeEEEEcCCHHHHHHHHHHHHhcCC----CCCeEEEEcCCCCCCCCCCCeeE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFS--STSVTGLNNNEYQITRGKELNRFAGV----DKTCNFVKADFMKMPFPDNSFDA 171 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~ 171 (305)
+.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...+. ..++.++++|+...+.++++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 6788999999999999999999653 37999999999999999998877553 34799999999875555678999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|++...+++ .++++.++|+|||.+++...
T Consensus 155 i~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPV-----------------VPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSBBSS-----------------CCHHHHHTEEEEEEEEEEES
T ss_pred EEECCchHH-----------------HHHHHHHhcCCCcEEEEEEe
Confidence 998877654 35678899999999999764
No 159
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.59 E-value=1.3e-14 Score=122.86 Aligned_cols=116 Identities=10% Similarity=0.070 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC---CCC---CCCeeEE
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM---PFP---DNSFDAV 172 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~---~~~fD~v 172 (305)
++.+|||+|||+|.++..++. .++.+|+|+|+|+.|++.|++++...++..+++++++|+.+. +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 567999999999999999885 357899999999999999999999888876799999997652 344 2689999
Q ss_pred EecccccccC-Chhhh---hhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 173 YAIEATCHAP-DAAEI---EIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 173 ~~~~~l~~~~-~~~~~---~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
++...+++.. +.... ......+....+.++.++|+|||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9986655433 10000 0000001122467788999999987664
No 160
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.59 E-value=1.5e-15 Score=129.42 Aligned_cols=107 Identities=12% Similarity=0.166 Sum_probs=84.1
Q ss_pred CCCeEEEEcCCCCh----HHHHHHhh-c----CCeEEEEcCCHHHHHHHHHHHHh-----------------------cC
Q 042544 100 SGQKVLDVGCGIGG----PLREIAQF-S----STSVTGLNNNEYQITRGKELNRF-----------------------AG 147 (305)
Q Consensus 100 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~~v~gvD~s~~~l~~a~~~~~~-----------------------~~ 147 (305)
++.+|||+|||||. .+..+++. + +.+|+|+|+|+.|++.|++.+.. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 45555543 2 35999999999999999986410 00
Q ss_pred -------CCCCeEEEEcCCCCCCCC-CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 148 -------VDKTCNFVKADFMKMPFP-DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 148 -------~~~~~~~~~~d~~~~~~~-~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+..++.|.++|+.+.|++ .++||+|+|.+++.|++++...+ +++++.+.|+|||++++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~---------vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQED---------ILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHH---------HHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHH---------HHHHHHHHhCCCcEEEEE
Confidence 013689999999886665 57899999999999998765433 699999999999999884
No 161
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.58 E-value=1.2e-14 Score=124.57 Aligned_cols=110 Identities=25% Similarity=0.328 Sum_probs=93.1
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
..+...+.+.++.+|||+|||+|.++..+++. ++.+|+++|+|+.+++.|++++...++..+++++++|+.+. ++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 34555678888999999999999999999964 46899999999999999999998877756899999999875 6667
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|++ +.+++.. +++++.++|+|||.+++.+
T Consensus 181 ~~D~V~~-----~~~~~~~-----------~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 181 DVDALFL-----DVPDPWN-----------YIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp SEEEEEE-----CCSCGGG-----------THHHHHHHEEEEEEEEEEE
T ss_pred ccCEEEE-----CCcCHHH-----------HHHHHHHHcCCCCEEEEEe
Confidence 8999997 3455433 6999999999999999976
No 162
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.58 E-value=3.1e-15 Score=126.36 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=87.5
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhc---CCCCC-------------
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFA---GVDKT------------- 151 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~---~~~~~------------- 151 (305)
.+...+...++.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.|++++... ++..+
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGK 121 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhccc
Confidence 3333444346679999999999999999854 4679999999999999999887654 33212
Q ss_pred ------------eE-------------EEEcCCCCCCC-----CCCCeeEEEecccccccCChh------hhhhcCCCCC
Q 042544 152 ------------CN-------------FVKADFMKMPF-----PDNSFDAVYAIEATCHAPDAA------EIEIGDGLPD 195 (305)
Q Consensus 152 ------------~~-------------~~~~d~~~~~~-----~~~~fD~v~~~~~l~~~~~~~------~~~~~~~~~~ 195 (305)
++ ++++|+.+... ..++||+|++...+.+..+.. ..
T Consensus 122 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~-------- 193 (250)
T 1o9g_A 122 PSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPV-------- 193 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHH--------
T ss_pred ccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHH--------
Confidence 56 99999987321 345899999987665554321 10
Q ss_pred cccHHHHHHHHHhCCceEEEecc
Q 042544 196 IRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 196 ~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
..+++++.++|+|||.+++....
T Consensus 194 ~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 194 AGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHHHSCTTCEEEEEESS
T ss_pred HHHHHHHHHhcCCCcEEEEeCcc
Confidence 12689999999999999985443
No 163
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.58 E-value=7.8e-15 Score=122.78 Aligned_cols=109 Identities=23% Similarity=0.267 Sum_probs=89.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC-C
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN-S 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 168 (305)
..+...+.+.++.+|||||||+|.++..+++..+.+|+++|+++.+++.|++++...+.. +++++++|+. .+++++ .
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~-~~~~~~~~ 158 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGS-KGFPPKAP 158 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG-GCCGGGCC
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcc-cCCCCCCC
Confidence 344556677888999999999999999999653389999999999999999999887765 5999999983 344443 5
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
||+|++..++++++ +++.+.|+|||.+++...
T Consensus 159 fD~Ii~~~~~~~~~-----------------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 159 YDVIIVTAGAPKIP-----------------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EEEEEECSBBSSCC-----------------HHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECCcHHHHH-----------------HHHHHhcCCCcEEEEEEe
Confidence 99999998887654 347789999999999764
No 164
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.58 E-value=2.4e-14 Score=122.15 Aligned_cols=97 Identities=25% Similarity=0.407 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++. .++.++++|+..+++++++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 46789999999999999999965 4789999999999999998763 3589999999998888899999998654
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
.. .++++.++|+|||.+++.+...
T Consensus 158 ~~------------------~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 PC------------------KAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp CC------------------CHHHHHHHEEEEEEEEEEEECT
T ss_pred hh------------------hHHHHHHhcCCCcEEEEEEcCH
Confidence 21 5899999999999999987543
No 165
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.58 E-value=7.4e-15 Score=122.13 Aligned_cols=104 Identities=18% Similarity=0.147 Sum_probs=86.9
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhc------CCeEEEEcCCHHHHHHHHHHHHhcCC----CCCeEEEEcCCCCCC---
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFS------STSVTGLNNNEYQITRGKELNRFAGV----DKTCNFVKADFMKMP--- 163 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~--- 163 (305)
.+.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.|++++...+. ..+++++++|+....
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 46788999999999999999999653 36999999999999999999887763 347999999998754
Q ss_pred -CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 164 -FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 164 -~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
.++++||+|++...+++ .++++.+.|+|||.+++...
T Consensus 157 ~~~~~~fD~I~~~~~~~~-----------------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASE-----------------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHCCEEEEEECSBBSS-----------------CCHHHHHHEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHH-----------------HHHHHHHhcCCCcEEEEEEc
Confidence 45678999999887764 35668899999999998753
No 166
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.57 E-value=1e-14 Score=121.83 Aligned_cols=106 Identities=21% Similarity=0.192 Sum_probs=83.5
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC---CCCCCCCe
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK---MPFPDNSF 169 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~f 169 (305)
.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.+.+++... .+++++++|+.+ +++.+++|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcE
Confidence 345678899999999999999999965 4589999999999888887776654 479999999987 34456789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++... .++.... ++.++.++|+|||.+++..
T Consensus 149 D~V~~~~~---~~~~~~~----------~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 149 DVIFADVA---QPDQTRI----------VALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEEECCC---CTTHHHH----------HHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEcCC---CccHHHH----------HHHHHHHHcCCCeEEEEEE
Confidence 99998543 2222111 4788999999999999954
No 167
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.57 E-value=6.7e-15 Score=130.93 Aligned_cols=164 Identities=19% Similarity=0.147 Sum_probs=112.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
+.++.+|||||||+|.++..+++ .++.+++++|+ +.+++.+++ . .+++++.+|+.+ +++ .||+|++..
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEcc
Confidence 34668999999999999999995 46789999999 788876543 1 359999999987 665 499999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHh---CCceEEEeccCCCCCCCCCccccCCCcccccccccchhHHHHHHH
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQ---AGFEVIWEKDLAPDSPLPWYLPLDTSHFSLSSFRLTSVGRFVTRN 253 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 253 (305)
++||++++.... ++++++++|+| ||.+++.+.........| ............
T Consensus 260 vlh~~~d~~~~~---------~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~---------------~~~~~~~~~d~~ 315 (358)
T 1zg3_A 260 VLHDWNDEQSLK---------ILKNSKEAISHKGKDGKVIIIDISIDETSDDR---------------GLTELQLDYDLV 315 (358)
T ss_dssp CGGGSCHHHHHH---------HHHHHHHHTGGGGGGCEEEEEECEECTTCSCH---------------HHHHHHHHHHHH
T ss_pred cccCCCHHHHHH---------HHHHHHHhCCCCCCCcEEEEEEeccCCCCccc---------------hhhhHHHhhCHH
Confidence 999999886433 69999999999 999999875443211000 000011111111
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHHHHhcCCcccccccceEEEEEc
Q 042544 254 MVKALEFVGLAPKGSQRVQDFLEKAAEGLAAGGRKEIFTPMYFFLARK 301 (305)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~arK 301 (305)
+. ...+-...+.+++..+++++||..+.... ......++.++|
T Consensus 316 ~~---~~~~g~~~t~~e~~~ll~~aGf~~~~~~~--~~~~~~vie~~~ 358 (358)
T 1zg3_A 316 ML---TMFLGKERTKQEWEKLIYDAGFSSYKITP--ISGFKSLIEVYP 358 (358)
T ss_dssp HH---HHHSCCCEEHHHHHHHHHHTTCCEEEEEE--ETTTEEEEEEEC
T ss_pred Hh---ccCCCCCCCHHHHHHHHHHcCCCeeEEEe--cCCCcEEEEEeC
Confidence 11 11223345678999999999998877432 223335666654
No 168
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.57 E-value=8.3e-15 Score=129.88 Aligned_cols=106 Identities=20% Similarity=0.247 Sum_probs=83.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||||||||.++...++....+|+|||.|+ |++.|++.++..++.++++++++|++++.++ ++||+|++-..-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccc
Confidence 36889999999999999888776446899999996 8899999999999988999999999998876 679999985543
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
..+....... .++....++|+|||.++-
T Consensus 160 ~~l~~e~~l~--------~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 160 YGLLHESMLS--------SVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TTBTTTCSHH--------HHHHHHHHHEEEEEEEES
T ss_pred ccccccchhh--------hHHHHHHhhCCCCceECC
Confidence 3333221110 146667799999998764
No 169
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.57 E-value=7.9e-15 Score=116.53 Aligned_cols=102 Identities=20% Similarity=0.244 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.|++. ..+++++++|+.+ ++++++||+|+++..+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~ 88 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPPY 88 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCCC
Confidence 45679999999999999999976 4 99999999999986 2468999999987 6667899999998888
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.++... ...+......+.++.+.| |||.+++..
T Consensus 89 ~~~~~~~~--~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 89 VPDTDDPI--IGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp BTTCCCTT--TBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ccCCcccc--ccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 77655411 001111123688888888 999998875
No 170
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.56 E-value=2.5e-15 Score=125.55 Aligned_cols=107 Identities=13% Similarity=0.211 Sum_probs=87.8
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCC--CCCeeE
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFP--DNSFDA 171 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~--~~~fD~ 171 (305)
+...++.+|||+|||+|..+..+++. ++.+|+++|+|+.+++.|++++...+...++.++++|+... +.. +++||+
T Consensus 50 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 50 LKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred HhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccE
Confidence 33456789999999999999999964 46899999999999999999999888777899999999873 322 578999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|++..... +... +++++.++|+|||.+++.+
T Consensus 130 I~~~~~~~---~~~~-----------~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAKG---QYRR-----------FFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGGS---CHHH-----------HHHHHGGGEEEEEEEEEET
T ss_pred EEECCCHH---HHHH-----------HHHHHHHHcCCCeEEEEEc
Confidence 99876543 2222 5899999999999999864
No 171
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.56 E-value=2.8e-15 Score=124.33 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=84.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-CC---CCCee
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-FP---DNSFD 170 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~---~~~fD 170 (305)
..++.+|||||||+|..+..+++. + +++|+++|+++.+++.|++++...++.++++++++|+.+. + ++ .++||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 346789999999999999999964 3 6899999999999999999999888877899999999652 1 11 25799
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.....+. . .+++++.++|+|||.+++.+
T Consensus 136 ~v~~d~~~~~~---~-----------~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQNN---P-----------AYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGGGH---H-----------HHHHHHHHTCCTTCEEEEES
T ss_pred EEEEcCCcHHH---H-----------HHHHHHHHhcCCCcEEEEeC
Confidence 99976542211 1 15899999999999888764
No 172
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.56 E-value=1.5e-14 Score=127.56 Aligned_cols=112 Identities=17% Similarity=0.218 Sum_probs=86.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcC----------CCCCeEEEEc
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAG----------VDKTCNFVKA 157 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~----------~~~~~~~~~~ 157 (305)
..+...+.+.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|++++...+ ...+++++++
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 34445667889999999999999999999964 33899999999999999999987532 2357999999
Q ss_pred CCCCC--CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 158 DFMKM--PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 158 d~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|+.+. ++++++||+|++. .+++.. .+.++.++|+|||.+++...
T Consensus 175 d~~~~~~~~~~~~fD~V~~~-----~~~~~~-----------~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALD-----MLNPHV-----------TLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp CTTCCC-------EEEEEEC-----SSSTTT-----------THHHHGGGEEEEEEEEEEES
T ss_pred ChHHcccccCCCCeeEEEEC-----CCCHHH-----------HHHHHHHhcCCCcEEEEEeC
Confidence 99885 4667789999973 233322 58999999999999998764
No 173
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.56 E-value=2.2e-15 Score=125.11 Aligned_cols=104 Identities=14% Similarity=0.166 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-CC----CCCee
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-FP----DNSFD 170 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~----~~~fD 170 (305)
.++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++++|+.+. + +. .++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46779999999999999999964 3 6899999999999999999999888877899999998652 2 11 17899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.... .+... +++++.++|+|||.+++.+
T Consensus 143 ~v~~~~~~---~~~~~-----------~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 143 LIYIDADK---ANTDL-----------YYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEECSCG---GGHHH-----------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCH---HHHHH-----------HHHHHHHhcCCCcEEEEeC
Confidence 99965431 11111 5899999999999999865
No 174
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.56 E-value=1.4e-14 Score=122.05 Aligned_cols=112 Identities=16% Similarity=0.258 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc--------CCCCCeEEEEcCCCC-CC--CCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA--------GVDKTCNFVKADFMK-MP--FPD 166 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--------~~~~~~~~~~~d~~~-~~--~~~ 166 (305)
.++.+|||||||+|.++..++.. +...|+|+|+|+.+++.+++++... ++ .++.++++|+.+ ++ +++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 46789999999999999999964 4679999999999999999987765 55 479999999987 55 667
Q ss_pred CCeeEEEecccccccCChhhh--hhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDAAEI--EIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++|.|+... +++... .....+....++.++.++|+|||.+++.+
T Consensus 127 ~~~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 8999998542 333100 00000001236999999999999999864
No 175
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.55 E-value=2.6e-15 Score=119.92 Aligned_cols=92 Identities=15% Similarity=0.129 Sum_probs=78.8
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC---CCCCeeE
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF---PDNSFDA 171 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~ 171 (305)
.+++.+|.+|||||||+ +++|+|+.|++.|+++.. .+++++++|+.++++ ++++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc-----cCcEEEEechhcCccccCCCCCEeE
Confidence 35678999999999996 239999999999998753 248999999998876 7899999
Q ss_pred EEeccccccc-CChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 172 VYAIEATCHA-PDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 172 v~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|++..+++|+ ++... ++++++++|||||.+++.+.
T Consensus 67 V~~~~~l~~~~~~~~~-----------~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAE-----------ILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp EEECCSTTCCCCCCHH-----------HHHHHHHHEEEEEEEEEEEE
T ss_pred EEECChhhhcccCHHH-----------HHHHHHHHCCCCEEEEEEcc
Confidence 9999999999 77655 69999999999999999653
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.55 E-value=2.9e-14 Score=122.50 Aligned_cols=116 Identities=13% Similarity=0.085 Sum_probs=87.0
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcC-CHHHHHHHHHHH-----HhcCCC----CCeEEEEcC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNN-NEYQITRGKELN-----RFAGVD----KTCNFVKAD 158 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~-s~~~l~~a~~~~-----~~~~~~----~~~~~~~~d 158 (305)
.+++.......++.+|||+|||+|.++..++.....+|+|+|+ |+.+++.|++++ ...++. .+++++..|
T Consensus 68 ~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~ 147 (281)
T 3bzb_A 68 ADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYR 147 (281)
T ss_dssp HHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECC
T ss_pred HHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEec
Confidence 3444444444577899999999999999988763349999999 899999999998 444443 468888766
Q ss_pred CCCCC--C----CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHH---h--CCceEEE
Q 042544 159 FMKMP--F----PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALK---Q--AGFEVIW 215 (305)
Q Consensus 159 ~~~~~--~----~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~---~--gG~~~i~ 215 (305)
..+.. + ++++||+|++..+++|.++... +++.+.++|+ | ||.+++.
T Consensus 148 ~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~-----------ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 148 WGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDA-----------LLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp TTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHH-----------HHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCCccHHHHhhccCCCCCEEEEeCcccChHHHHH-----------HHHHHHHHhcccCCCCCCEEEEE
Confidence 55421 1 3578999999999998777655 5999999999 9 9987764
No 177
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.55 E-value=7.2e-16 Score=129.63 Aligned_cols=106 Identities=14% Similarity=0.080 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCC-----CCCee
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFP-----DNSFD 170 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~-----~~~fD 170 (305)
.++.+|||||||+|..+..+++. ++++|+++|+++.+++.|++++...++.++++++++|+.+. +.. +++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 45679999999999999999964 26899999999999999999999988877899999999763 211 47899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+|++..... +.. .+++++.++|+|||.+++.+..
T Consensus 139 ~V~~d~~~~---~~~-----------~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 139 FIFIDADKT---NYL-----------NYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEESCGG---GHH-----------HHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEEcCChH---HhH-----------HHHHHHHHhcCCCeEEEEECCc
Confidence 999764311 111 1589999999999999986543
No 178
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.55 E-value=3.7e-14 Score=125.91 Aligned_cols=123 Identities=19% Similarity=0.135 Sum_probs=95.9
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD 166 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (305)
...+...+...++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++++...++. +++++++|+.+++.+.
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 345556677888899999999999999999964 4589999999999999999999998887 8999999999987777
Q ss_pred CCeeEEEecccccccCC--hhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 167 NSFDAVYAIEATCHAPD--AAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+.||+|++.-....... .....+ -..+++++.++|+|||.+++.+.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~-----~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHL-----YWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHH-----HHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCCcCccCCcccHHHH-----HHHHHHHHHHhcCCCcEEEEEeC
Confidence 78999999655432211 110000 01158889999999999999763
No 179
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.54 E-value=2.9e-15 Score=118.76 Aligned_cols=103 Identities=17% Similarity=0.126 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-C--CCCCeeEEEec
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-F--PDNSFDAVYAI 175 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~--~~~~fD~v~~~ 175 (305)
++.+|||+|||+|.++..+++. +..|+|+|+|+.+++.|++++...+. +++++++|+.+. + . ..++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999976 56699999999999999999888776 689999998762 2 1 12479999998
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHH--HHHHhCCceEEEecc
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCL--EALKQAGFEVIWEKD 218 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~~~i~~~~ 218 (305)
..++ ..... .++.+. ++|+|||.+++....
T Consensus 118 ~~~~--~~~~~-----------~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 118 PPYA--MDLAA-----------LFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CCTT--SCTTH-----------HHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCCc--hhHHH-----------HHHHHHhhcccCCCcEEEEEeCC
Confidence 7765 33222 366666 899999999987643
No 180
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.54 E-value=2.5e-14 Score=124.83 Aligned_cols=125 Identities=19% Similarity=0.187 Sum_probs=90.8
Q ss_pred HHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 93 ALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 93 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
...+.+.++.+|||+|||+|..+..+++. ..++|+|+|+|+.+++.+++++...++. +++++++|+..++..+++||
T Consensus 111 ~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD 189 (315)
T 1ixk_A 111 PVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFD 189 (315)
T ss_dssp HHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEE
T ss_pred HHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCC
Confidence 34567888999999999999999999964 2479999999999999999999988875 69999999988654457899
Q ss_pred EEEec------ccccccCChhhh----hhcC-CCCCcccHHHHHHHHHhCCceEEEecc
Q 042544 171 AVYAI------EATCHAPDAAEI----EIGD-GLPDIRSTRKCLEALKQAGFEVIWEKD 218 (305)
Q Consensus 171 ~v~~~------~~l~~~~~~~~~----~~~~-~~~~~~~l~~~~~~L~~gG~~~i~~~~ 218 (305)
+|++. .++.+.++.... .+.. ......+++++.++|||||.+++.+..
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99973 234433321100 0000 000012689999999999999997753
No 181
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.54 E-value=3.9e-14 Score=121.77 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=86.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe---eEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF---DAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f---D~v~~~ 175 (305)
.++.+|||+|||+|..+..++..++.+|+|+|+|+.+++.|++++...++..+++++++|+.+ +++ ++| |+|+++
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSN 199 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEEC
T ss_pred cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEc
Confidence 356799999999999999999557789999999999999999999988887679999999987 232 578 999996
Q ss_pred cccc-----------ccCChhhhhhcCCCCCcccHHHHH-HHHHhCCceEEEe
Q 042544 176 EATC-----------HAPDAAEIEIGDGLPDIRSTRKCL-EALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~-----------~~~~~~~~~~~~~~~~~~~l~~~~-~~L~~gG~~~i~~ 216 (305)
-... |.|... +..+...+.+++++. +.|+|||.+++..
T Consensus 200 PPyi~~~~~l~~~v~~ep~~a---l~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEA---LFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHH---HBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCCcccccChhhccCcHHH---hcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 2211 222221 111222234789999 9999999999853
No 182
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.54 E-value=1.1e-14 Score=121.08 Aligned_cols=102 Identities=21% Similarity=0.271 Sum_probs=84.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcC-------CeEEEEcCCHHHHHHHHHHHHhcCC----CCCeEEEEcCCCCCCCC
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSS-------TSVTGLNNNEYQITRGKELNRFAGV----DKTCNFVKADFMKMPFP 165 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-------~~v~gvD~s~~~l~~a~~~~~~~~~----~~~~~~~~~d~~~~~~~ 165 (305)
.+.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|++++...+. ..+++++++|+.. +++
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYP 159 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCC
Confidence 467889999999999999999986423 5999999999999999998876541 2479999999987 444
Q ss_pred C-CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 D-NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+ ++||+|++..+++++ .+++.+.|+|||.+++..
T Consensus 160 ~~~~fD~I~~~~~~~~~-----------------~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDT-----------------PTELINQLASGGRLIVPV 194 (227)
T ss_dssp GGCSEEEEEECSCBSSC-----------------CHHHHHTEEEEEEEEEEE
T ss_pred cCCCccEEEECCchHHH-----------------HHHHHHHhcCCCEEEEEE
Confidence 4 789999998887764 356789999999999976
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.53 E-value=4.1e-15 Score=122.25 Aligned_cols=102 Identities=14% Similarity=0.143 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCCCCCeeEEEecc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFPDNSFDAVYAIE 176 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 176 (305)
++.+|||||||+|..+..+++. + +.+|+++|+|+.+++.|++++...++.++++++++|+.+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 5679999999999999999964 3 6899999999999999999998877766799999999763 44456 99999863
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
. ..+... +++++.++|+|||.+++.+
T Consensus 135 ~---~~~~~~-----------~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D---VFNGAD-----------VLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T---TSCHHH-----------HHHHHGGGEEEEEEEEEES
T ss_pred C---hhhhHH-----------HHHHHHHhcCCCeEEEEEC
Confidence 2 122222 5899999999999998865
No 184
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.53 E-value=9.1e-15 Score=120.64 Aligned_cols=122 Identities=12% Similarity=0.013 Sum_probs=89.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
++++.+|||||||+|.++..++.. +..+|+|+|+++.+++.|+++++..++.+++++.++|+.+...+++.||+|+..+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 457889999999999999999965 3568999999999999999999999998889999999988554444799988655
Q ss_pred ccc----ccCChhhhhhcCC----CCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 177 ATC----HAPDAAEIEIGDG----LPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 177 ~l~----~~~~~~~~~~~~~----~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
+.. .+-+.....+..+ +....-...++++|...|+.++.+..+
T Consensus 99 mGg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 99 MGGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp ECHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEEEE
Confidence 422 1111110001110 111124788899999999988876533
No 185
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.53 E-value=6.6e-15 Score=124.11 Aligned_cols=104 Identities=14% Similarity=0.218 Sum_probs=84.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-C-----CCCCe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-F-----PDNSF 169 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~f 169 (305)
.++.+|||||||+|..+..+++. + +++|+++|+|+.+++.|++++...++.++++++++|+.+. + + ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 45679999999999999999964 3 6899999999999999999999888877899999998753 3 2 15789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++.... .+... +++++.++|+|||.+++..
T Consensus 158 D~V~~d~~~---~~~~~-----------~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDADK---DNYLN-----------YHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSCS---TTHHH-----------HHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCch---HHHHH-----------HHHHHHHhCCCCeEEEEec
Confidence 999986431 12211 6899999999999998865
No 186
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.53 E-value=2.9e-15 Score=124.49 Aligned_cols=111 Identities=16% Similarity=0.133 Sum_probs=77.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCC-HHHHHHH---HHHHHhcCCCCCeEEEEcCCCCCCCC-CCCeeEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNN-EYQITRG---KELNRFAGVDKTCNFVKADFMKMPFP-DNSFDAV 172 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s-~~~l~~a---~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~v 172 (305)
.++.+|||||||+|.++..+++ .++.+|+|+|+| +.|++.| ++++...++. ++.++++|+..+|.. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 5778999999999999999984 467899999999 7777776 7766666654 799999999987531 1345555
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.....+. .... ......++++++++|||||.+++..
T Consensus 102 ~~~~~~~~~--~~~~----~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 102 SILFPWGTL--LEYV----IKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEESCCHHH--HHHH----HTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEeCCCcHH--hhhh----hcchHHHHHHHHHhcCCCcEEEEEE
Confidence 443322111 0000 0001126899999999999998843
No 187
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.53 E-value=9.3e-15 Score=122.62 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=85.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CC----------
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MP---------- 163 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~---------- 163 (305)
...++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|++++...+...++.++++|+.+ ++
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 3446789999999999999999965 3 689999999999999999999888876679999999865 22
Q ss_pred ----CCC--CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 ----FPD--NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ----~~~--~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++ ++||+|++.....+.+ . +++++.++|+|||.+++.+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~~~~---~-----------~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKENYP---N-----------YYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGGGHH---H-----------HHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHHHHH---H-----------HHHHHHHHcCCCeEEEEEc
Confidence 233 7899999875433222 1 5899999999999999865
No 188
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.52 E-value=1.4e-14 Score=128.10 Aligned_cols=115 Identities=19% Similarity=0.210 Sum_probs=91.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
..+...+...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++...+.. ++++.+|+...+ +++
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~--~~~ 261 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV--KGR 261 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--CSC
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--cCC
Confidence 34455565556779999999999999999964 4579999999999999999999877654 678899987643 678
Q ss_pred eeEEEecccccccCC---hhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 169 FDAVYAIEATCHAPD---AAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 169 fD~v~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
||+|++...+++... ... ..+++++.++|+|||.+++...
T Consensus 262 fD~Iv~~~~~~~g~~~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 262 FDMIISNPPFHDGMQTSLDAA---------QTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EEEEEECCCCCSSSHHHHHHH---------HHHHHHHGGGEEEEEEEEEEEE
T ss_pred eeEEEECCCcccCccCCHHHH---------HHHHHHHHHhCCCCcEEEEEEc
Confidence 999999988876321 111 1269999999999999999763
No 189
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=1.6e-14 Score=122.23 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=83.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+.. +++.++|+.+. +++++||+|++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~~~fD~Vv~n~~ 193 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPFGPFDLLVANLY 193 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGGCCEEEEEEECC
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcCCCCCEEEECCc
Confidence 457889999999999999998875 569999999999999999999887764 89999998762 44678999998755
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+++. ..+.++.++|+|||.+++..
T Consensus 194 ~~~~~--------------~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 194 AELHA--------------ALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp HHHHH--------------HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHH--------------HHHHHHHHHcCCCCEEEEEe
Confidence 44321 15899999999999999865
No 190
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.52 E-value=6.2e-14 Score=116.55 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=81.6
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC---CCCCCee
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP---FPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD 170 (305)
+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++... .+++++++|+.... ..+++||
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCce
Confidence 34678899999999999999999965 3489999999999999998887643 57999999998721 1235899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|++... .++.... ++.++.++|+|||.+++.
T Consensus 146 ~v~~~~~---~~~~~~~----------~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 146 VIFEDVA---QPTQAKI----------LIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCC---STTHHHH----------HHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC---CHhHHHH----------HHHHHHHhcCCCCEEEEE
Confidence 9997543 2222111 489999999999999886
No 191
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.52 E-value=1.2e-14 Score=120.80 Aligned_cols=120 Identities=8% Similarity=0.043 Sum_probs=87.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
++++.+|||||||+|.++..++.. +..+|+|+|+++.+++.|+++++..++.+++++.++|+.+...++++||+|++.+
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 467889999999999999999965 3568999999999999999999999998889999999987544434699988654
Q ss_pred c----ccccCChhhhhhcCC----CCCcccHHHHHHHHHhCCceEEEec
Q 042544 177 A----TCHAPDAAEIEIGDG----LPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 177 ~----l~~~~~~~~~~~~~~----~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+ +..+-+.....+..+ +....-...++++|...|+-++.+.
T Consensus 99 mGg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 99 MGGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp ECHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEE
Confidence 3 222111111111111 1111247888999999998876654
No 192
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=1.1e-13 Score=118.37 Aligned_cols=105 Identities=18% Similarity=0.115 Sum_probs=87.7
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
..+.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+++++..++. ++.++++|+.+.+. .++||+|++
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEE
Confidence 34678899999999999999999965 4569999999999999999999988775 68899999988743 578999998
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
.... +... .+.++.+.|+|||.+++...
T Consensus 193 d~p~----~~~~-----------~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 193 GYVH----KTHK-----------FLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp CCCS----SGGG-----------GHHHHHHHEEEEEEEEEEEE
T ss_pred CCcc----cHHH-----------HHHHHHHHcCCCCEEEEEEc
Confidence 6543 2222 68999999999999998763
No 193
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.51 E-value=3.4e-14 Score=112.94 Aligned_cols=108 Identities=17% Similarity=0.095 Sum_probs=81.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------CCC
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------FPD 166 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~~ 166 (305)
.+.++.+|||+|||+|.++..+++. ++.+++|+|+|+ +++. .+++++++|+.+.+ +++
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCC
Confidence 3677889999999999999999965 358999999999 7532 46899999998876 677
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++..++++.................+++++.++|+|||.+++..
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 89999999888887765411000000000116899999999999999876
No 194
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.51 E-value=1e-15 Score=125.84 Aligned_cols=124 Identities=19% Similarity=0.156 Sum_probs=69.0
Q ss_pred HHHHHHcCC-CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-
Q 042544 90 HFLALQLGL-KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD- 166 (305)
Q Consensus 90 ~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~- 166 (305)
+.+...+.. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++...+. +++++++|+.+ ++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~-~~~~~ 95 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIE-WLIER 95 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-HHHHH
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHh-hhhhh
Confidence 444444443 67889999999999999999964 467999999999999999998877655 68899999887 5554
Q ss_pred ----CCeeEEEecccccccC------Chhh-----hhhcCCCCC----cccHHHHHHHHHhCCceEEEe
Q 042544 167 ----NSFDAVYAIEATCHAP------DAAE-----IEIGDGLPD----IRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ----~~fD~v~~~~~l~~~~------~~~~-----~~~~~~~~~----~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++...+.+.. .... ..+..+... ..+++++.++|+|||.+++.+
T Consensus 96 ~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 96 AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 8999999965443222 1110 000000000 125777889999999944433
No 195
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.51 E-value=5e-14 Score=121.19 Aligned_cols=84 Identities=18% Similarity=0.191 Sum_probs=71.4
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.++++....+..++++++++|+.+++++ +|
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~f 94 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FF 94 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CC
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hh
Confidence 44555677788899999999999999999976 6799999999999999999887655545799999999987765 69
Q ss_pred eEEEecc
Q 042544 170 DAVYAIE 176 (305)
Q Consensus 170 D~v~~~~ 176 (305)
|+|+++.
T Consensus 95 D~vv~nl 101 (285)
T 1zq9_A 95 DTCVANL 101 (285)
T ss_dssp SEEEEEC
T ss_pred cEEEEec
Confidence 9999853
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.50 E-value=5.7e-14 Score=120.25 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=88.9
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhh-cC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC----CCCC
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQF-SS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF----PDNS 168 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~ 168 (305)
.+.+.++.+|||+|||+|..+..+++. .+ .+|+|+|+|+.+++.+++++...+.. +++++++|+..++. .+++
T Consensus 78 ~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp HHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCC
T ss_pred HhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhcccc
Confidence 567788999999999999999999963 34 79999999999999999999988875 79999999987543 2578
Q ss_pred eeEEEecc------cccccCChhhhhhcCC-CCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 169 FDAVYAIE------ATCHAPDAAEIEIGDG-LPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 169 fD~v~~~~------~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
||+|++.- ++...+......+... -....+++++.++|||||.+++.+..+
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99999752 2221110000000000 000126889999999999999987543
No 197
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=2.2e-14 Score=118.14 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=84.8
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC-CeeEEEec
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN-SFDAVYAI 175 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~fD~v~~~ 175 (305)
++++.+|||||||+|..+..++.. +..+|+|+|+++.+++.|++++...++.+++++.++|..+ +++.+ .||+|+..
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~Ivia 91 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIA 91 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEc
Confidence 457889999999999999999964 4579999999999999999999999998889999999965 22333 69998865
Q ss_pred ccc----cccCChhhhhhcCC----CCCcccHHHHHHHHHhCCceEEEec
Q 042544 176 EAT----CHAPDAAEIEIGDG----LPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 176 ~~l----~~~~~~~~~~~~~~----~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++- ..+-+.....+..+ +....-...+++.|...|+.++.+.
T Consensus 92 G~Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 92 GMGGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp EECHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEE
T ss_pred CCChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEE
Confidence 431 11111111001111 0111247778888888888777654
No 198
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=1.3e-14 Score=121.47 Aligned_cols=97 Identities=12% Similarity=0.208 Sum_probs=76.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-----cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC---CCCC-CCee
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-----SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM---PFPD-NSFD 170 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~-~~fD 170 (305)
++.+|||||||+|..+..+++. ++++|+|+|+|+.|++.|+. ...+++++++|+.+. +..+ .+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcchhHHHHHhhccCCCC
Confidence 4579999999999999999864 57899999999999987761 235799999999874 4333 4799
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHH-HHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLE-ALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-~L~~gG~~~i~~ 216 (305)
+|++... |. +... .+.++.+ +|+|||++++.+
T Consensus 155 ~I~~d~~--~~-~~~~-----------~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 155 LIFIDNA--HA-NTFN-----------IMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEEEESS--CS-SHHH-----------HHHHHHHHTCCTTCEEEECS
T ss_pred EEEECCc--hH-hHHH-----------HHHHHHHhhCCCCCEEEEEe
Confidence 9997654 32 2222 5888997 999999999864
No 199
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.49 E-value=2.5e-14 Score=119.46 Aligned_cols=104 Identities=15% Similarity=0.181 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC----CCCCC--CCee
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK----MPFPD--NSFD 170 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~--~~fD 170 (305)
.++.+|||||||+|..+..+++. + +++|+++|+|+.+++.|++++...+...+++++++|+.+ ++.++ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 35679999999999999999964 3 579999999999999999999888877689999999754 22333 7899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.... ++... +++++.++|+|||.+++.+
T Consensus 151 ~V~~d~~~---~~~~~-----------~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 151 LIFIDADK---RNYPR-----------YYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEECSCG---GGHHH-----------HHHHHHHTEEEEEEEEEEC
T ss_pred EEEECCCH---HHHHH-----------HHHHHHHHcCCCeEEEEeC
Confidence 99976442 11111 5899999999999999865
No 200
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.48 E-value=2.7e-14 Score=119.68 Aligned_cols=104 Identities=20% Similarity=0.249 Sum_probs=84.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-C-----CCCCe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-F-----PDNSF 169 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~-----~~~~f 169 (305)
.++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|++++...++.++++++++|+.+. + + ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 45679999999999999999964 3 6899999999999999999999888877899999998752 2 2 25789
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++..... .. ..+++++.++|+|||.+++..
T Consensus 149 D~I~~d~~~~-----~~---------~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDADKP-----NY---------IKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSCGG-----GH---------HHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCchH-----HH---------HHHHHHHHHhcCCCeEEEEec
Confidence 9999753211 11 126899999999999988864
No 201
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.48 E-value=3.3e-14 Score=124.72 Aligned_cols=107 Identities=18% Similarity=0.165 Sum_probs=83.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCC-CeEEEEcCCCCCCC----CCCCeeEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDK-TCNFVKADFMKMPF----PDNSFDAV 172 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~----~~~~fD~v 172 (305)
..++.+|||+|||+|.++..++.. +++|+++|+|+.+++.|++++...++.. +++++++|+.++.. .+++||+|
T Consensus 151 ~~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 151 ADRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred cCCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 346789999999999999999975 6699999999999999999998888765 59999999976421 14689999
Q ss_pred Eecccc-c---------ccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEAT-C---------HAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l-~---------~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.-.. . +..+.. .++.++.++|+|||.+++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~-----------~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLP-----------LMLDICREILSPKALGLVLT 272 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHH-----------HHHHHHHHTBCTTCCEEEEE
T ss_pred EECCccccCCchHHHHHHHHHHH-----------HHHHHHHHhcCcCcEEEEEE
Confidence 984321 1 111111 25888899999999977765
No 202
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.47 E-value=3.4e-14 Score=118.23 Aligned_cols=105 Identities=17% Similarity=0.222 Sum_probs=84.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C-CCC----CCe
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P-FPD----NSF 169 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~----~~f 169 (305)
..++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|++++...+...+++++++|+.+. + +++ ++|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 356789999999999999999964 3 6899999999999999999998888877899999998652 1 111 689
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++.... .+.. .+++++.++|+|||.+++.+
T Consensus 147 D~v~~d~~~---~~~~-----------~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 147 DVAVVDADK---ENCS-----------AYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEECSCS---TTHH-----------HHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCH---HHHH-----------HHHHHHHHHcCCCeEEEEEC
Confidence 999985431 1111 15899999999999998865
No 203
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.46 E-value=3.6e-13 Score=123.18 Aligned_cols=127 Identities=16% Similarity=0.213 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCC
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQF-SS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDN 167 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~ 167 (305)
+...+.+.++.+|||+|||+|..+..+++. ++ ++|+++|+|+.+++.+++++...|+. ++.++++|+..++ ++++
T Consensus 251 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCSS
T ss_pred HHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhccC
Confidence 344567888999999999999999999964 34 79999999999999999999988874 6999999998865 5557
Q ss_pred CeeEEEe------cccccccCChhhhhhcCCCC-----CcccHHHHHHHHHhCCceEEEeccC
Q 042544 168 SFDAVYA------IEATCHAPDAAEIEIGDGLP-----DIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 168 ~fD~v~~------~~~l~~~~~~~~~~~~~~~~-----~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
+||+|++ .+++.+.|+.....-...+. ...+++++.++|+|||.+++.+..+
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 8999996 33455555432100000000 0125888999999999999987533
No 204
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.46 E-value=1.3e-13 Score=117.88 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=74.2
Q ss_pred HcCCC-CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEE-EEcCCCCCC---CCCCCe
Q 042544 95 QLGLK-SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNF-VKADFMKMP---FPDNSF 169 (305)
Q Consensus 95 ~~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~~~d~~~~~---~~~~~f 169 (305)
.+.+. ++.+|||||||||.++..+++....+|+|+|+|+.|++.+.+. ..++.. ...|+..++ ++..+|
T Consensus 79 ~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l~~~~f 152 (291)
T 3hp7_A 79 VFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDFTEGLP 152 (291)
T ss_dssp HTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGCTTCCC
T ss_pred hcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhCCCCCC
Confidence 34443 5779999999999999999876456999999999999875432 122322 223443332 344569
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|+|++..+++++.. ++.++.++|+|||.+++..
T Consensus 153 D~v~~d~sf~sl~~--------------vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 153 SFASIDVSFISLNL--------------ILPALAKILVDGGQVVALV 185 (291)
T ss_dssp SEEEECCSSSCGGG--------------THHHHHHHSCTTCEEEEEE
T ss_pred CEEEEEeeHhhHHH--------------HHHHHHHHcCcCCEEEEEE
Confidence 99999877775522 5999999999999998863
No 205
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.46 E-value=8.5e-14 Score=120.87 Aligned_cols=111 Identities=20% Similarity=0.192 Sum_probs=82.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHh---cCCCCCeEEEEcCCCCCCC--CCCCeeEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRF---AGVDKTCNFVKADFMKMPF--PDNSFDAV 172 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~---~~~~~~~~~~~~d~~~~~~--~~~~fD~v 172 (305)
+++.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. ....++++++++|+..++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 56689999999999999999965 457999999999999999998632 1224579999999987543 46889999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.....+.+.... ....+++++.++|+|||.+++..
T Consensus 174 i~d~~~~~~~~~~l-------~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 174 IIDTTDPAGPASKL-------FGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEECC----------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCccccchhh-------hHHHHHHHHHHhcCCCcEEEEec
Confidence 99655444332211 01226999999999999999864
No 206
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.45 E-value=1.3e-13 Score=118.79 Aligned_cols=111 Identities=19% Similarity=0.202 Sum_probs=81.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcC----CCCCeEEEEcCCCCC-CCCCCCeeEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAG----VDKTCNFVKADFMKM-PFPDNSFDAV 172 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~----~~~~~~~~~~d~~~~-~~~~~~fD~v 172 (305)
+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++...+ ..++++++++|+... +..+++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35679999999999999999965 45799999999999999999876542 135899999999773 3456789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.......+... +....+++++.++|+|||.+++..
T Consensus 162 i~D~~~p~~~~~~-------l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGES-------LFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC-----------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchh-------ccHHHHHHHHHHhcCCCCEEEEec
Confidence 9854432222211 111236999999999999999864
No 207
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.45 E-value=7.1e-13 Score=107.91 Aligned_cols=92 Identities=21% Similarity=0.208 Sum_probs=70.2
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
...++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++. +++++++|+.+++ ++||+|++..
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECC
Confidence 455778999999999999999997634579999999999999998753 5899999998864 6899999999
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHH
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEAL 206 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L 206 (305)
.+++..+.... .+++++.+.+
T Consensus 119 p~~~~~~~~~~---------~~l~~~~~~~ 139 (200)
T 1ne2_A 119 PFGSVVKHSDR---------AFIDKAFETS 139 (200)
T ss_dssp CC-------CH---------HHHHHHHHHE
T ss_pred CchhccCchhH---------HHHHHHHHhc
Confidence 98888653221 1467777766
No 208
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.44 E-value=5.2e-14 Score=120.21 Aligned_cols=111 Identities=21% Similarity=0.090 Sum_probs=76.8
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHH-hcCCCCCeEEE--EcCCCCCCCCCCCeeEE
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNR-FAGVDKTCNFV--KADFMKMPFPDNSFDAV 172 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~--~~d~~~~~~~~~~fD~v 172 (305)
..+.++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..+++... ......++.++ ++|+..++ +++||+|
T Consensus 78 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 78 GGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp TSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 44567899999999999999999976 7999999998 6433222100 00011168899 99998865 6789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCC--ceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAG--FEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG--~~~i~~ 216 (305)
+|..+ ++.+.+..... ..+.+++++.++|+||| .+++..
T Consensus 153 vsd~~-~~~~~~~~d~~----~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 153 LCDIG-ESNPTAAVEAS----RTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EECCC-CCCSCHHHHHH----HHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EECCC-cCCCchhhhHH----HHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99877 54443311000 00115888999999999 888855
No 209
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=1.5e-13 Score=118.76 Aligned_cols=108 Identities=13% Similarity=0.076 Sum_probs=82.9
Q ss_pred CeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC--CCCCCCeeEEEecccc
Q 042544 102 QKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM--PFPDNSFDAVYAIEAT 178 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~fD~v~~~~~l 178 (305)
.+|||||||+|..+..+++ +++.+|++||+++.+++.|++++... ..++++++++|+..+ .+++++||+|++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999996 67889999999999999999987532 235799999998764 3456889999985433
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
........ ....++++++++|+|||.+++...
T Consensus 170 ~~~~~~~L-------~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 170 GAITPQNF-------TTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TSCCCGGG-------SBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccchhh-------hHHHHHHHHHHhcCCCcEEEEEec
Confidence 22111111 012269999999999999988753
No 210
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.44 E-value=3.5e-13 Score=109.68 Aligned_cols=102 Identities=17% Similarity=0.228 Sum_probs=76.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-c--CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----------
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-S--STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----------- 163 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----------- 163 (305)
+.++.+|||+|||+|.++..+++. + +.+|+|+|+|+.. . ..+++++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~-~~~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------P-IPNVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------C-CTTCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------C-CCCceEEEccccchhhhhhccccccc
Confidence 567889999999999999999964 3 5899999999831 1 246899999998866
Q ss_pred --------------CCCCCeeEEEecccccccCC----hhhh-hhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 --------------FPDNSFDAVYAIEATCHAPD----AAEI-EIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 --------------~~~~~fD~v~~~~~l~~~~~----~~~~-~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++++||+|++..++++... .... .. ....++++.++|+|||.+++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~-----~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCEL-----TLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHH-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHH-----HHHHHHHHHHHccCCCEEEEEE
Confidence 56678999999877665421 1110 00 0014788999999999998854
No 211
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.44 E-value=6.9e-14 Score=118.79 Aligned_cols=112 Identities=16% Similarity=0.075 Sum_probs=76.9
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHH-hcCCCCCeEEE--EcCCCCCCCCCCCeeE
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNR-FAGVDKTCNFV--KADFMKMPFPDNSFDA 171 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~--~~d~~~~~~~~~~fD~ 171 (305)
...+.++.+|||||||+|.++..+++. .+|+|+|+++ |+..+++... ......++.++ ++|+..++ +++||+
T Consensus 69 ~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 143 (265)
T 2oxt_A 69 RGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDV 143 (265)
T ss_dssp HTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSE
T ss_pred cCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcE
Confidence 345678899999999999999999875 7999999998 5432211100 00001168899 99998865 678999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCC--ceEEEe
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAG--FEVIWE 216 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG--~~~i~~ 216 (305)
|+|..+ ++.+++..... ..+.++..+.++|+||| .+++..
T Consensus 144 V~sd~~-~~~~~~~~d~~----~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 144 IMCDVG-ESSPKWSVESE----RTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEECCC-CCCSCHHHHHH----HHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEeCc-ccCCccchhHH----HHHHHHHHHHHHhccCCCeEEEEEe
Confidence 999877 55444321000 00115888999999999 888865
No 212
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.44 E-value=2.9e-14 Score=125.85 Aligned_cols=96 Identities=19% Similarity=0.239 Sum_probs=76.9
Q ss_pred CCCeEEEEcCC------CChHHHHHHh-h-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC------
Q 042544 100 SGQKVLDVGCG------IGGPLREIAQ-F-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP------ 165 (305)
Q Consensus 100 ~~~~vLDiGcG------~G~~~~~l~~-~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------ 165 (305)
++.+||||||| +|..+..+++ + ++++|+|+|+|+.|.. ...+++++++|+.++++.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~~ 285 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIARR 285 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhcc
Confidence 56799999999 7777777774 3 6899999999999831 135799999999998776
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+++||+|++.. .++..+... ++++++++|||||.+++.+.
T Consensus 286 d~sFDlVisdg-sH~~~d~~~-----------aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 286 YGPFDIVIDDG-SHINAHVRT-----------SFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp HCCEEEEEECS-CCCHHHHHH-----------HHHHHGGGEEEEEEEEEECG
T ss_pred cCCccEEEECC-cccchhHHH-----------HHHHHHHhcCCCeEEEEEec
Confidence 68999999864 355444433 69999999999999999864
No 213
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.43 E-value=4e-13 Score=119.92 Aligned_cols=88 Identities=22% Similarity=0.191 Sum_probs=75.1
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFS-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
.+.... ..++.+|||+|||+|.++..++... .++|+|+|+|+.|++.|++++...++.++++++++|+.++++++++|
T Consensus 209 ~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~f 287 (373)
T 3tm4_A 209 AMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSV 287 (373)
T ss_dssp HHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCE
T ss_pred HHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCc
Confidence 344444 6788999999999999999999752 24999999999999999999999888778999999999988877899
Q ss_pred eEEEeccccc
Q 042544 170 DAVYAIEATC 179 (305)
Q Consensus 170 D~v~~~~~l~ 179 (305)
|+|++...+.
T Consensus 288 D~Ii~npPyg 297 (373)
T 3tm4_A 288 DFAISNLPYG 297 (373)
T ss_dssp EEEEEECCCC
T ss_pred CEEEECCCCC
Confidence 9999965543
No 214
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.43 E-value=2.8e-13 Score=118.73 Aligned_cols=112 Identities=23% Similarity=0.260 Sum_probs=83.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc--CC-CCCeEEEEcCCCCC--CCCCCCee
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA--GV-DKTCNFVKADFMKM--PFPDNSFD 170 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~--~~~~~~fD 170 (305)
..+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++... ++ .++++++++|+... ..++++||
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456689999999999999999965 4579999999999999999987642 33 35799999998763 23467899
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|++.......+.... ....+++++.++|+|||.+++.
T Consensus 197 lIi~d~~~p~~~~~~l-------~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKEL-------FEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGG-------GSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhh-------hHHHHHHHHHHhcCCCcEEEEe
Confidence 9998543211111110 0122699999999999999986
No 215
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.43 E-value=7.4e-13 Score=112.66 Aligned_cols=103 Identities=19% Similarity=0.163 Sum_probs=86.9
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.+|.+|||+|||+|.+++.++....++|+++|++|.+++.++++++.+++.++++++++|+.+++. .+.||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 4679999999999999999999775679999999999999999999999998899999999988754 578999986522
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.... ++..+.++|++||.+.+.+
T Consensus 202 ----~~~~~-----------~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 202 ----VRTHE-----------FIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ----SSGGG-----------GHHHHHHHEEEEEEEEEEE
T ss_pred ----CcHHH-----------HHHHHHHHcCCCCEEEEEe
Confidence 22222 6889999999999887654
No 216
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.43 E-value=2.8e-12 Score=104.81 Aligned_cols=96 Identities=16% Similarity=0.043 Sum_probs=76.9
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
...++.+|||+|||+|.++..++.....+|+|+|+|+.+++.+++++...+. +++++++|+.+++ ++||+|++..
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 4557889999999999999999976345899999999999999999887765 6999999998864 4799999987
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHH
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEAL 206 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L 206 (305)
.+++....... .+++++.+++
T Consensus 121 p~~~~~~~~~~---------~~l~~~~~~l 141 (207)
T 1wy7_A 121 PFGSQRKHADR---------PFLLKAFEIS 141 (207)
T ss_dssp CCSSSSTTTTH---------HHHHHHHHHC
T ss_pred CCccccCCchH---------HHHHHHHHhc
Confidence 77665432221 2567777776
No 217
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.42 E-value=6e-13 Score=122.06 Aligned_cols=123 Identities=18% Similarity=0.134 Sum_probs=91.3
Q ss_pred HHcCCC--CCCeEEEEcCCCChHHHHHHhhc--CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-CCCC
Q 042544 94 LQLGLK--SGQKVLDVGCGIGGPLREIAQFS--STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-PDNS 168 (305)
Q Consensus 94 ~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 168 (305)
..+.+. ++.+|||+|||+|..+..+++.. .+.|+++|+|+.+++.+++++...|+. ++.++++|+..++. .+++
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTC
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhcccc
Confidence 345666 89999999999999999999652 479999999999999999999988875 69999999987653 4578
Q ss_pred eeEEEec------ccccccCChhh------h-hhcCCCCCcccHHHHHHHHHhCCceEEEeccC
Q 042544 169 FDAVYAI------EATCHAPDAAE------I-EIGDGLPDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 169 fD~v~~~------~~l~~~~~~~~------~-~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
||+|++. .++.+.++... . .+. -....++.++.++|||||.+++.+..+
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~--~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIA--ATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHH--HHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHH--HHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 9999972 23433333200 0 000 000125888999999999999987544
No 218
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.42 E-value=5.9e-13 Score=109.36 Aligned_cols=105 Identities=16% Similarity=0.125 Sum_probs=87.3
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEec
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAI 175 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 175 (305)
+...++.+|||||||+|-++..+. +..+|+|+|+++.+++.+++++...+. +..+.+.|....+.+ ++||+|++.
T Consensus 101 ~~~~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 101 FSAETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp TSSCCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred hcCCCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC-CCcchHHHH
Confidence 344567799999999999999887 688999999999999999999887764 589999999887655 589999999
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
-+++|+.+.... ...++.+.|+++|.++-.
T Consensus 176 k~lh~LE~q~~~----------~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 176 KLLPLLEREQAG----------SAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp SCHHHHHHHSTT----------HHHHHHHHCBCSEEEEEE
T ss_pred HHHHHhhhhchh----------hHHHHHHHhcCCCEEEEc
Confidence 999998776553 344888899998766654
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=2.7e-13 Score=117.58 Aligned_cols=112 Identities=24% Similarity=0.224 Sum_probs=82.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHh--cCC-CCCeEEEEcCCCC-CCCCCCCeeEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRF--AGV-DKTCNFVKADFMK-MPFPDNSFDAV 172 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~-~~~~~~~fD~v 172 (305)
..++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++.. .++ .++++++++|+.+ ++..+++||+|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 345689999999999999999965 458999999999999999998764 233 4579999999876 33446789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.......+... +....+++++.++|+|||.+++..
T Consensus 173 i~d~~~~~~~~~~-------l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 173 ITDSSDPMGPAES-------LFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEECC------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCCCCcchh-------hhHHHHHHHHHhccCCCeEEEEec
Confidence 9854322211110 001236999999999999999865
No 220
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.41 E-value=2.3e-13 Score=123.76 Aligned_cols=125 Identities=15% Similarity=0.039 Sum_probs=91.3
Q ss_pred HHHcCCCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCCe
Q 042544 93 ALQLGLKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNSF 169 (305)
Q Consensus 93 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 169 (305)
...+.+.++.+|||+|||+|..+..+++. . .++|+++|+|+.+++.+++++...|+. +.++++|+..++ +.+++|
T Consensus 94 a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 94 GVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCE
T ss_pred HHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccC
Confidence 34567788999999999999999999954 2 379999999999999999999998875 899999987754 235789
Q ss_pred eEEEe------cccccccCChhhhhhcCCC-----CCcccHHHHHHHHHhCCceEEEeccC
Q 042544 170 DAVYA------IEATCHAPDAAEIEIGDGL-----PDIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 170 D~v~~------~~~l~~~~~~~~~~~~~~~-----~~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
|+|++ ..++...++.....-...+ ....+++++.++|||||.+++++..+
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99995 2234433432110000000 00125888899999999999987544
No 221
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=4e-13 Score=114.92 Aligned_cols=110 Identities=23% Similarity=0.215 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc--CC-CCCeEEEEcCCCC-CCCCCCCeeEEEe
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA--GV-DKTCNFVKADFMK-MPFPDNSFDAVYA 174 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~-~~~~~~~fD~v~~ 174 (305)
.+.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++... +. .++++++++|+.. ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5679999999999999999976 4579999999999999999987542 23 4589999999876 3334578999998
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.......+.. .+....+++++.++|+|||.+++..
T Consensus 155 d~~~~~~~~~-------~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAV-------NLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCC-------CCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcch-------hhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 5433222211 1111236999999999999998863
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.39 E-value=3.6e-13 Score=115.60 Aligned_cols=109 Identities=24% Similarity=0.287 Sum_probs=81.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhc--CC--------CCCeEEEEcCCCCC-CCCCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFA--GV--------DKTCNFVKADFMKM-PFPDN 167 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~--------~~~~~~~~~d~~~~-~~~~~ 167 (305)
+++.+|||||||+|..+..+++.+..+|+++|+++.+++.|++++ .. ++ .++++++++|+.+. +. ++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 456799999999999999999665579999999999999999987 33 22 45799999998652 22 57
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|++.......+... +....+++++.++|+|||.+++..
T Consensus 152 ~fD~Ii~d~~~~~~~~~~-------l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKV-------LFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC------------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchh-------hhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999854422111111 001236999999999999998864
No 223
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.39 E-value=4.7e-13 Score=116.92 Aligned_cols=111 Identities=26% Similarity=0.273 Sum_probs=82.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc--CC-CCCeEEEEcCCCCC-CCCCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA--GV-DKTCNFVKADFMKM-PFPDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~~-~~~~~~fD~v~ 173 (305)
+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++... +. .++++++++|+.+. +..+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35679999999999999999965 4689999999999999999987642 22 35799999998762 22357899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...-..-+.... ....+++++.++|+|||.+++..
T Consensus 195 ~d~~~p~~~~~~l-------~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSDPIGPAETL-------FNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCCSSSGGGGG-------SSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcCCCCcchhh-------hHHHHHHHHHHhcCCCcEEEEEc
Confidence 8542111111111 00226999999999999999864
No 224
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.38 E-value=9.9e-13 Score=119.61 Aligned_cols=127 Identities=17% Similarity=0.187 Sum_probs=93.8
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCC
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDN 167 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~ 167 (305)
.+...+.+.++.+|||+|||+|..+..+++. ++++|+|+|+|+.+++.+++++...+. ++.++++|+..++ ++++
T Consensus 237 ~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~ 314 (429)
T 1sqg_A 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQ 314 (429)
T ss_dssp THHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTC
T ss_pred HHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccC
Confidence 3444567788999999999999999999965 347999999999999999999988876 3789999998865 5567
Q ss_pred CeeEEEe------cccccccCChhhhhhcCCCC-----CcccHHHHHHHHHhCCceEEEeccC
Q 042544 168 SFDAVYA------IEATCHAPDAAEIEIGDGLP-----DIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 168 ~fD~v~~------~~~l~~~~~~~~~~~~~~~~-----~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
+||+|++ .+++.+.|+.....-...+. ...+++++.+.|+|||.+++.+..+
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 8999996 23455555431100000000 0125888999999999999987533
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.38 E-value=3.7e-13 Score=117.31 Aligned_cols=111 Identities=18% Similarity=0.156 Sum_probs=84.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHh--cC-C-CCCeEEEEcCCCC-CCCCCCCeeEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRF--AG-V-DKTCNFVKADFMK-MPFPDNSFDAV 172 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~-~-~~~~~~~~~d~~~-~~~~~~~fD~v 172 (305)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++.. .+ . .++++++++|+.+ ++..+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 35679999999999999999965 467999999999999999998754 12 2 3579999999976 33346789999
Q ss_pred Eecccccc---cCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCH---APDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++....+. -+.... ....+++++.++|+|||.+++..
T Consensus 156 i~d~~~~~~~~~~~~~l-------~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLL-------YTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGG-------SSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhc-------cHHHHHHHHHHhcCCCcEEEEEc
Confidence 99755433 111100 01236999999999999999874
No 226
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=1.5e-12 Score=116.35 Aligned_cols=104 Identities=11% Similarity=0.030 Sum_probs=84.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCC-CCCCeeEEEe
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPF-PDNSFDAVYA 174 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~fD~v~~ 174 (305)
..++.+|||+| |+|.++..++.. +..+|+|+|+|+.|++.|++++...++. +++++++|+.+ +|. .+++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34678999999 999999999864 3479999999999999999999988876 79999999988 663 3568999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCce-EEE
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFE-VIW 215 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~-~i~ 215 (305)
...++... .. .+++++.++|+|||.+ ++.
T Consensus 248 ~~p~~~~~-~~-----------~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 248 DPPETLEA-IR-----------AFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCCSSHHH-HH-----------HHHHHHHHTBCSTTCEEEEE
T ss_pred CCCCchHH-HH-----------HHHHHHHHHcccCCeEEEEE
Confidence 76544321 11 2689999999999965 443
No 227
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.38 E-value=4.4e-12 Score=115.40 Aligned_cols=92 Identities=22% Similarity=0.363 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC
Q 042544 82 RESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK 161 (305)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~ 161 (305)
....+...+.+...+.+.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...++. +++|+++|+.+
T Consensus 268 ~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~ 345 (433)
T 1uwv_A 268 AGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEE 345 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTS
T ss_pred HHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHH
Confidence 3344455566666777778889999999999999999976 789999999999999999999888775 79999999987
Q ss_pred ----CCCCCCCeeEEEec
Q 042544 162 ----MPFPDNSFDAVYAI 175 (305)
Q Consensus 162 ----~~~~~~~fD~v~~~ 175 (305)
+++++++||+|++.
T Consensus 346 ~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CCSSSGGGTTCCSEEEEC
T ss_pred HhhhhhhhcCCCCEEEEC
Confidence 23456789999974
No 228
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.37 E-value=7.7e-13 Score=114.34 Aligned_cols=112 Identities=23% Similarity=0.244 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHh--cCC-CCCeEEEEcCCCC-CCCCCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRF--AGV-DKTCNFVKADFMK-MPFPDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~--~~~-~~~~~~~~~d~~~-~~~~~~~fD~v~ 173 (305)
+++.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++.. .+. .++++++++|+.. ++..+++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34579999999999999999965 468999999999999999998754 222 3579999999865 333457899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...-..+... ..+....+++++.++|+|||.+++..
T Consensus 169 ~d~~~~~~~~~------~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQG------GHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCch------hhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 74321101110 00111236999999999999999863
No 229
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.37 E-value=3.3e-13 Score=117.40 Aligned_cols=111 Identities=23% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc--CC-CCCeEEEEcCCCC-CCCCCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA--GV-DKTCNFVKADFMK-MPFPDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~~~~~~~d~~~-~~~~~~~fD~v~ 173 (305)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++... ++ .++++++++|+.+ ++..+++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35579999999999999999965 4689999999999999999987543 22 4579999999876 333467899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+...-...+.... ....+++++.++|+|||.+++..
T Consensus 187 ~d~~~~~~~~~~l-------~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESL-------FGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhh-------hHHHHHHHHHhhcCCCeEEEEEC
Confidence 8543211111110 01236999999999999999864
No 230
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.37 E-value=2e-12 Score=104.51 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC-----------C
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP-----------D 166 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~ 166 (305)
+.++.+|||+|||+|.++..+++. +++|+|+|+++.. . ..+++++++|+.+.+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------E-IAGVRFIRCDIFKETIFDDIDRALREEGI 89 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------C-CTTCEEEECCTTSSSHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------c-CCCeEEEEccccCHHHHHHHHHHhhcccC
Confidence 467899999999999999999976 8899999999742 1 24799999999875421 1
Q ss_pred CCeeEEEecccccccCCh--hhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDA--AEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++.......... +...... .....++.+.++|+|||.+++..
T Consensus 90 ~~~D~Vlsd~~~~~~g~~~~d~~~~~~--l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGIPSRDHAVSYQ--IGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp SSEEEEEECCCCCCCSCHHHHHHHHHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCCcccCHHHHHH--HHHHHHHHHHHHccCCCEEEEEE
Confidence 489999986532211110 0000000 00125788899999999999865
No 231
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.37 E-value=2.4e-13 Score=113.28 Aligned_cols=99 Identities=17% Similarity=0.075 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC--CCCeEEEE-cCCCCCCCCCCCeeEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV--DKTCNFVK-ADFMKMPFPDNSFDAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~-~d~~~~~~~~~~fD~v~~~ 175 (305)
.++.+|||||||||.++..+++....+|+|+|+|+.|++.++++...... ..++.+.. .|+.. ..||.+.+.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~~D 110 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-----GRPSFTSID 110 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----CCCSEEEEC
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----CCCCEEEEE
Confidence 35679999999999999999976335999999999999987764321110 01222222 22221 123433333
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.++.++ .. ++.++.++|+|||.+++..
T Consensus 111 ~v~~~l---~~-----------~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 111 VSFISL---DL-----------ILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp CSSSCG---GG-----------THHHHHHHSCTTCEEEEEE
T ss_pred EEhhhH---HH-----------HHHHHHHhccCCCEEEEEE
Confidence 333333 11 6999999999999998853
No 232
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.36 E-value=8.6e-13 Score=119.84 Aligned_cols=123 Identities=15% Similarity=0.061 Sum_probs=91.1
Q ss_pred HHHcCCCCCCeEEEEcCCCChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-CCCCCe
Q 042544 93 ALQLGLKSGQKVLDVGCGIGGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-FPDNSF 169 (305)
Q Consensus 93 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f 169 (305)
...+.+.++.+|||+|||+|..+..+++. . .++|+++|+|+.+++.+++++...|+. ++.++++|+..++ ..+++|
T Consensus 98 ~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~F 176 (456)
T 3m4x_A 98 GTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFF 176 (456)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCE
T ss_pred HHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccC
Confidence 34567888999999999999999999954 2 479999999999999999999999885 6999999987754 235789
Q ss_pred eEEEecc------cccccCChhhhhhcCCCC--------CcccHHHHHHHHHhCCceEEEeccC
Q 042544 170 DAVYAIE------ATCHAPDAAEIEIGDGLP--------DIRSTRKCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 170 D~v~~~~------~l~~~~~~~~~~~~~~~~--------~~~~l~~~~~~L~~gG~~~i~~~~~ 219 (305)
|+|++.- ++..-|+.... .... ...++.++.++|||||.+++++..+
T Consensus 177 D~Il~DaPCSg~G~~rr~p~~~~~---~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 177 DRIVVDAPCSGEGMFRKDPNAIKE---WTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEECCCCCGGGTTTCHHHHHH---CCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CEEEECCCCCCccccccCHHHhhh---cCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 9999732 23222221100 0000 0126888999999999999877644
No 233
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.36 E-value=3.1e-12 Score=110.67 Aligned_cols=84 Identities=21% Similarity=0.334 Sum_probs=67.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCe
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSF 169 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 169 (305)
+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+. ++++++++|+..+++ .+|
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--~~~ 107 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--PKF 107 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--CCC
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--ccC
Confidence 44555667788899999999999999999976 78999999999999999998876665 579999999988765 379
Q ss_pred eEEEeccc
Q 042544 170 DAVYAIEA 177 (305)
Q Consensus 170 D~v~~~~~ 177 (305)
|+|++...
T Consensus 108 D~Vv~n~p 115 (299)
T 2h1r_A 108 DVCTANIP 115 (299)
T ss_dssp SEEEEECC
T ss_pred CEEEEcCC
Confidence 99998543
No 234
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.36 E-value=8.6e-13 Score=113.35 Aligned_cols=112 Identities=25% Similarity=0.260 Sum_probs=83.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcC--C-CCCeEEEEcCCCCC-CCCCCCeeEE
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAG--V-DKTCNFVKADFMKM-PFPDNSFDAV 172 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~--~-~~~~~~~~~d~~~~-~~~~~~fD~v 172 (305)
.+++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++...+ . .++++++++|+.+. +..+++||+|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 345689999999999999999965 45899999999999999999875432 1 35799999998763 2235789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++.....+.+..... ...+++++.++|+|||.+++..
T Consensus 156 i~d~~~~~~~~~~l~-------~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 156 IVDSSDPIGPAETLF-------NQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEECCCTTTGGGGGS-------SHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEcCCCCCCcchhhh-------HHHHHHHHHHhcCCCcEEEEEC
Confidence 985433222222110 0126999999999999999863
No 235
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.36 E-value=2.6e-12 Score=104.02 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=73.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh-cC---------CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEE-EcCCCCCC--
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF-SS---------TSVTGLNNNEYQITRGKELNRFAGVDKTCNFV-KADFMKMP-- 163 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~---------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~-- 163 (305)
.+.++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+ .. .+++++ ++|+...+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHH
Confidence 3567899999999999999999965 32 799999999832 11 368888 88887642
Q ss_pred ------CCCCCeeEEEeccccccc----CChhhh-hhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 ------FPDNSFDAVYAIEATCHA----PDAAEI-EIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ------~~~~~fD~v~~~~~l~~~----~~~~~~-~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+++++||+|++..+++.. .+.... .. ...+++++.++|+|||.+++..
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISL-----CLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHH-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHH-----HHHHHHHHHHHhcCCCEEEEEe
Confidence 345689999996644332 222100 00 0025889999999999999875
No 236
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.35 E-value=6.3e-13 Score=119.11 Aligned_cols=111 Identities=13% Similarity=0.054 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCC-CeEEEEcCCCCC-C-C--CCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDK-TCNFVKADFMKM-P-F--PDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~-~-~--~~~~fD~v~ 173 (305)
.++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++.. +++++++|+.+. + . ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5778999999999999999997533599999999999999999999888865 899999998762 2 1 235899999
Q ss_pred ecccc-----cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEAT-----CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l-----~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.-.. .+..+....- ..++..+.++|+|||.+++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~-------~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDY-------HKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHH-------HHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHH-------HHHHHHHHHhcCCCcEEEEEe
Confidence 85332 1222221100 014667789999999998875
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.35 E-value=3.5e-12 Score=112.20 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=83.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
.++.+|||+|||+|.++.. +. .+.+|+|+|+|+.+++.+++++...++..+++++++|+.++. ++||+|++....
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 4788999999999999999 87 478999999999999999999999888668999999998865 789999974211
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
. . ..++..+.++|+|||.+++.+
T Consensus 269 ~-----~----------~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 269 F-----A----------HKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp T-----G----------GGGHHHHHHHEEEEEEEEEEE
T ss_pred h-----H----------HHHHHHHHHHcCCCCEEEEEE
Confidence 1 0 126999999999999988865
No 238
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.34 E-value=1.7e-12 Score=109.06 Aligned_cols=78 Identities=15% Similarity=0.256 Sum_probs=64.5
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-C
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD-N 167 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~ 167 (305)
.+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++... .++++++++|+.++++++ .
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHHhCCcccCC
Confidence 344555677778899999999999999999976 58999999999999999988653 247999999999988764 4
Q ss_pred Cee
Q 042544 168 SFD 170 (305)
Q Consensus 168 ~fD 170 (305)
.|+
T Consensus 95 ~~~ 97 (244)
T 1qam_A 95 SYK 97 (244)
T ss_dssp CCE
T ss_pred CeE
Confidence 553
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.34 E-value=1.3e-11 Score=109.03 Aligned_cols=117 Identities=14% Similarity=0.141 Sum_probs=88.9
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhh-cC-----CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCee
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQF-SS-----TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFD 170 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~-----~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 170 (305)
...++.+|||+|||+|.++..+++. +. .+++|+|+++.+++.|+.++...+. ++.++++|.... .+.++||
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~-~~~~~fD 203 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLAN-LLVDPVD 203 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSC-CCCCCEE
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCc-cccCCcc
Confidence 4456789999999999999998854 22 7899999999999999999887776 589999998763 3457899
Q ss_pred EEEecccccccCChhhh-hhcC----CCCC--cccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEI-EIGD----GLPD--IRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~-~~~~----~~~~--~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|++.-.+++++..... .... +... ..++.++.+.|+|||.+++..
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99999887776654321 0000 1111 136889999999999988875
No 240
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.34 E-value=1.3e-12 Score=108.25 Aligned_cols=105 Identities=10% Similarity=0.071 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
.+..+|||||||+|-++..++.. +..+|+++|+++.|++.+++++...|.. ..+.+.|...-+ +.+.||+|++.-+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~-p~~~~DvaL~lkt 207 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDR-LDEPADVTLLLKT 207 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSC-CCSCCSEEEETTC
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccC-CCCCcchHHHHHH
Confidence 44679999999999999999854 7899999999999999999999988764 789999998754 4578999999999
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++|+.+...-. .+ ++.+.|+++|.++-..
T Consensus 208 i~~Le~q~kg~---------g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 208 LPCLETQQRGS---------GW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHHHHSTTH---------HH-HHHHHSSCSEEEEEEE
T ss_pred HHHhhhhhhHH---------HH-HHHHHhCCCCEEEecc
Confidence 99998775532 34 8999999999877654
No 241
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.33 E-value=1.5e-11 Score=111.18 Aligned_cols=100 Identities=21% Similarity=0.246 Sum_probs=78.2
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. ++++++|+.++.. .+||+|++.-.
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~--~~fD~Vv~dPP 362 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV--KGFDTVIVDPP 362 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC--TTCSEEEECCC
T ss_pred cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc--cCCCEEEEcCC
Confidence 457789999999999999999976 689999999999999999999887775 9999999988642 27999998432
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...... . +++.+ +.|+|+|.++++.
T Consensus 363 r~g~~~--~-----------~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 363 RAGLHP--R-----------LVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp TTCSCH--H-----------HHHHH-HHHCCSEEEEEES
T ss_pred ccchHH--H-----------HHHHH-HhcCCCcEEEEEC
Confidence 211110 1 34444 4589999988864
No 242
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.33 E-value=2.2e-12 Score=116.09 Aligned_cols=115 Identities=11% Similarity=0.129 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC-CCCeEEEEcCCCCCCC----CCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV-DKTCNFVKADFMKMPF----PDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~~----~~~~fD~v~ 173 (305)
.++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++ .++++++++|+.++.. ..++||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47789999999999999999975346999999999999999999998887 5579999999976421 146899999
Q ss_pred ecccccccCChhhhhhcCCCCC-cccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPD-IRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.-.......... ...... ...+.++.+.|+|||.+++..
T Consensus 299 ~dpP~~~~~~~~~---~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 299 MDPPKFVENKSQL---MGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp ECCSSTTTCSSSS---SCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhHH---HHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8532211100000 000000 115788999999999999876
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=2.3e-12 Score=123.62 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCC-CCeEEEEcCCCC-CCCCCCCeeEEEeccc
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVD-KTCNFVKADFMK-MPFPDNSFDAVYAIEA 177 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~ 177 (305)
++.+|||+|||||.+++.++.....+|+++|+|+.+++.|+++++..++. .+++++++|+.+ ++...++||+|++.-.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 68899999999999999998753457999999999999999999998886 589999999987 3444578999998542
Q ss_pred ccc-------cCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCH-------APDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~-------~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
... ..+.... -...+..+.++|+|||.+++..
T Consensus 619 ~f~~~~~~~~~~~~~~~-------~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRD-------HLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp SBC-------CCBHHHH-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCccchhHHHHHHH-------HHHHHHHHHHhcCCCcEEEEEE
Confidence 110 0010000 0115888899999999999875
No 244
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.32 E-value=6.7e-12 Score=107.82 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=73.2
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNS 168 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 168 (305)
.+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.+++++.. .++++++++|+.++++++.+
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~---~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKEL---YNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHH---CSSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhcc---CCCeEEEECchhhCCcccCC
Confidence 344556778888999999999999999999986 78999999999999999998763 24799999999998888778
Q ss_pred eeEEEeccc
Q 042544 169 FDAVYAIEA 177 (305)
Q Consensus 169 fD~v~~~~~ 177 (305)
||+|+++..
T Consensus 115 fD~Iv~NlP 123 (295)
T 3gru_A 115 FNKVVANLP 123 (295)
T ss_dssp CSEEEEECC
T ss_pred ccEEEEeCc
Confidence 999997643
No 245
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.31 E-value=5.4e-14 Score=118.41 Aligned_cols=120 Identities=15% Similarity=0.191 Sum_probs=82.6
Q ss_pred HHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-CCe
Q 042544 91 FLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD-NSF 169 (305)
Q Consensus 91 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~f 169 (305)
.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++. ...+++++++|+.++++++ ++|
T Consensus 20 ~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 20 QIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSSEE
T ss_pred HHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCCCc
Confidence 3445677788899999999999999999976 5899999999999998877654 2357999999999988764 678
Q ss_pred eEEEecccccccCChhhhhhc-CCCCCcccH----HHHHHHHHhCCceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIG-DGLPDIRST----RKCLEALKQAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~-~~~~~~~~l----~~~~~~L~~gG~~~i~~ 216 (305)
.|+++... +........+. ........+ +.+.++|+|||.+.+..
T Consensus 96 -~vv~n~Py-~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 96 -KIVGNIPY-HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp -EEEEECCS-SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred -EEEEeCCc-cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 55553211 11111000000 000001134 77999999999887644
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.31 E-value=1.8e-12 Score=116.78 Aligned_cols=117 Identities=20% Similarity=0.181 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC----CCCCeeEEEe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF----PDNSFDAVYA 174 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~ 174 (305)
.++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|++++...++.++++++++|+.+... ++++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 378899999999999999999763459999999999999999999988876589999999876421 2568999998
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
.-...............+ ....+.++.++|+|||.+++.+.
T Consensus 296 dpP~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRA--YFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHH--HHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHH--HHHHHHHHHHhcCCCcEEEEEEC
Confidence 533211111000000000 01157888999999999888763
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.29 E-value=3.8e-11 Score=107.53 Aligned_cols=120 Identities=16% Similarity=0.117 Sum_probs=90.7
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cC--------------------------------------CeEEEE
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SS--------------------------------------TSVTGL 129 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--------------------------------------~~v~gv 129 (305)
...++...+..++..|||++||+|.+++.++.. .+ .+|+|+
T Consensus 190 Aa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 269 (393)
T 3k0b_A 190 AAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGG 269 (393)
T ss_dssp HHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred HHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEE
Confidence 345566777788899999999999999988843 11 469999
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccc-cCChhhhhhcCCCCCcccHHHHHHHHHh
Q 042544 130 NNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCH-APDAAEIEIGDGLPDIRSTRKCLEALKQ 208 (305)
Q Consensus 130 D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 208 (305)
|+++.|++.|++++...++..+++++++|+.+++.+ ++||+|+++-.... +.+.... ..+.+.+.+.|++
T Consensus 270 Did~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l--------~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 270 DIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAV--------RQLYREMGIVYKR 340 (393)
T ss_dssp ESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHH--------HHHHHHHHHHHHT
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhH--------HHHHHHHHHHHhc
Confidence 999999999999999999877899999999998765 58999998744321 1111111 1146667777876
Q ss_pred --CCceEEEec
Q 042544 209 --AGFEVIWEK 217 (305)
Q Consensus 209 --gG~~~i~~~ 217 (305)
||.+.+.+.
T Consensus 341 ~~g~~~~iit~ 351 (393)
T 3k0b_A 341 MPTWSVYVLTS 351 (393)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 888777653
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.28 E-value=2e-12 Score=109.59 Aligned_cols=98 Identities=12% Similarity=0.028 Sum_probs=79.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhc--C-CCCCeEEEEcCCCCCCCCCCCeeEEEec
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFA--G-VDKTCNFVKADFMKMPFPDNSFDAVYAI 175 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~-~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 175 (305)
+.+.+|||||||+|..+..+++.+ .+|+++|+++.+++.|++++... + ..++++++.+|+..+. ++||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 355799999999999999998664 99999999999999998765321 1 1357999999998754 789999975
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+++.. +++++.++|+|||.+++..
T Consensus 147 -----~~dp~~-----------~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 -----QEPDIH-----------RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----SCCCHH-----------HHHHHHTTEEEEEEEEEEE
T ss_pred -----CCChHH-----------HHHHHHHhcCCCcEEEEEc
Confidence 234432 5999999999999999864
No 249
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.28 E-value=4.7e-12 Score=113.35 Aligned_cols=113 Identities=15% Similarity=0.130 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCCCCCeeEEEeccc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFPDNSFDAVYAIEA 177 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~ 177 (305)
.++.+|||+|||||.++..++.. ++.|+++|+|+.+++.|+++++..++. ..+.++|+.++ +...+.||+|++.-.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 45899999999999999999976 677999999999999999999988875 35678998763 221344999997532
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...-........... -..++..+.++|+|||.+++.+
T Consensus 290 ~f~~~~~~~~~~~~~--~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 290 TLVKRPEELPAMKRH--LVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp CCCSSGGGHHHHHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCHHHHHHHHHH--HHHHHHHHHHhcCCCCEEEEEE
Confidence 211100000000000 0125788899999999998765
No 250
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.27 E-value=1.3e-12 Score=117.11 Aligned_cols=114 Identities=17% Similarity=0.160 Sum_probs=83.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC----CCCCeeEEEec
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF----PDNSFDAVYAI 175 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~fD~v~~~ 175 (305)
++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...++.. ++++++|+.++.. .+++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7789999999999999999976 7899999999999999999999888754 9999999976421 25689999974
Q ss_pred ccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 176 EATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 176 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
-................ ...++.++.++|+|||.+++.+.
T Consensus 287 pP~~~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRA--YKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCCSCCSTTSHHHHHHH--HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCChhHHHHHHHH--HHHHHHHHHHhcCCCCEEEEEEC
Confidence 32211110000000000 01157889999999999998763
No 251
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.26 E-value=1.1e-10 Score=104.17 Aligned_cols=121 Identities=11% Similarity=0.085 Sum_probs=91.8
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-cC--------------------------------------CeEEE
Q 042544 88 HEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-SS--------------------------------------TSVTG 128 (305)
Q Consensus 88 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--------------------------------------~~v~g 128 (305)
....++...+..++..|||.+||+|.+++..+.. .+ .+|+|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3345566777788899999999999999998843 11 46999
Q ss_pred EcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccc-cCChhhhhhcCCCCCcccHHHHHHHHH
Q 042544 129 LNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCH-APDAAEIEIGDGLPDIRSTRKCLEALK 207 (305)
Q Consensus 129 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~ 207 (305)
+|+++.|++.|++++...|+.+.++++++|+.+++.+ .+||+|++.-.... +.+.... ..+.+++.+.|+
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l--------~~ly~~lg~~lk 332 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAV--------DILYNEMGETFA 332 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHH--------HHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHH--------HHHHHHHHHHHh
Confidence 9999999999999999999887899999999998765 48999998754321 2222111 114666777887
Q ss_pred h--CCceEEEec
Q 042544 208 Q--AGFEVIWEK 217 (305)
Q Consensus 208 ~--gG~~~i~~~ 217 (305)
+ ||.+.+.+.
T Consensus 333 ~~~g~~~~iit~ 344 (384)
T 3ldg_A 333 PLKTWSQFILTN 344 (384)
T ss_dssp TCTTSEEEEEES
T ss_pred hCCCcEEEEEEC
Confidence 6 888777653
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.25 E-value=1.5e-12 Score=112.80 Aligned_cols=106 Identities=15% Similarity=0.103 Sum_probs=73.7
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcC----CHHHHHHHHHHHHhcCCCCCeEEEEc-CCCCCCCCCCCee
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNN----NEYQITRGKELNRFAGVDKTCNFVKA-DFMKMPFPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~----s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD 170 (305)
..+.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. ....+ .+++.++++ |+..++ +++||
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccCC--cCCCC
Confidence 34567889999999999999999976 58999999 565442111 01111 146899999 887764 56899
Q ss_pred EEEeccccc---ccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATC---HAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~---~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|+|..+.. +..+.... +.++..+.++|+|||.+++..
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~--------l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRT--------LRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHH--------HHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEECCccccCcchhhHHHH--------HHHHHHHHHHhCCCCEEEEEe
Confidence 999976653 22222110 125888899999999888854
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.25 E-value=4.2e-11 Score=106.69 Aligned_cols=115 Identities=5% Similarity=-0.030 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 042544 83 ESIKRHEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM 162 (305)
Q Consensus 83 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 162 (305)
........++.+.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++..++ ++++++++|+.++
T Consensus 197 ~~~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~ 273 (369)
T 3bt7_A 197 AMNIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEF 273 (369)
T ss_dssp HHHHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHH
T ss_pred HHHHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHH
Confidence 33445556666666654 578999999999999999874 67999999999999999999998887 4799999998763
Q ss_pred C--CCC--------------CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 163 P--FPD--------------NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 163 ~--~~~--------------~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
. +.. .+||+|++.- + .. ....++.+.|+++|.+++.+.
T Consensus 274 ~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dP-------P-r~---------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 274 TQAMNGVREFNRLQGIDLKSYQCETIFVDP-------P-RS---------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHHSSCCCCTTGGGSCGGGCCEEEEEECC-------C-TT---------CCCHHHHHHHTTSSEEEEEES
T ss_pred HHHHhhccccccccccccccCCCCEEEECc-------C-cc---------ccHHHHHHHHhCCCEEEEEEC
Confidence 1 111 3799998531 1 10 135678888889998888653
No 254
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.25 E-value=3.4e-11 Score=101.44 Aligned_cols=80 Identities=9% Similarity=0.130 Sum_probs=66.7
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC---
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD--- 166 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--- 166 (305)
+.+...+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.|++.+++++.. ..+++++++|+.++++++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhcc
Confidence 44555678888999999999999999999976 68999999999999999998754 357999999999987643
Q ss_pred -CCeeEEEe
Q 042544 167 -NSFDAVYA 174 (305)
Q Consensus 167 -~~fD~v~~ 174 (305)
++|| |++
T Consensus 95 ~~~~~-vv~ 102 (255)
T 3tqs_A 95 DKPLR-VVG 102 (255)
T ss_dssp SSCEE-EEE
T ss_pred CCCeE-EEe
Confidence 4688 444
No 255
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.24 E-value=3e-11 Score=110.36 Aligned_cols=126 Identities=16% Similarity=0.192 Sum_probs=92.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--------------cCCeEEEEcCCHHHHHHHHHHHHhcCCCC-CeEE
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--------------SSTSVTGLNNNEYQITRGKELNRFAGVDK-TCNF 154 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~ 154 (305)
+.+...+.+.++.+|||.|||+|.++..+++. ....++|+|+++.+++.|+.++...+... ++.+
T Consensus 161 ~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i 240 (445)
T 2okc_A 161 QAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPI 240 (445)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSE
T ss_pred HHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCE
Confidence 34555566777889999999999999988853 24789999999999999999887777642 5789
Q ss_pred EEcCCCCCCCCCCCeeEEEecccccccCChhhh----hhc--CCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 155 VKADFMKMPFPDNSFDAVYAIEATCHAPDAAEI----EIG--DGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 155 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~----~~~--~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.++|....+.. ++||+|+++-.+.+....... .+. .+-....++.++.+.|+|||.+.+..
T Consensus 241 ~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 241 VCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp EECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 99999876543 489999998766554322110 000 00001347999999999999988765
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.24 E-value=7.9e-11 Score=105.27 Aligned_cols=119 Identities=19% Similarity=0.190 Sum_probs=90.7
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc-C--------------------------------------CeEEEE
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS-S--------------------------------------TSVTGL 129 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--------------------------------------~~v~gv 129 (305)
...+....+..++.+|||++||+|.+++.++... + .+|+|+
T Consensus 184 Aa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~Gv 263 (385)
T 3ldu_A 184 AAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGY 263 (385)
T ss_dssp HHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEE
T ss_pred HHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEE
Confidence 3455666777888999999999999999987431 1 579999
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccccc-cCChhhhhhcCCCCCcccHHHHHHHHHh
Q 042544 130 NNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATCH-APDAAEIEIGDGLPDIRSTRKCLEALKQ 208 (305)
Q Consensus 130 D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 208 (305)
|+++.+++.|++++...++.+.+++.++|+.+++.+ ++||+|++.-.... +.+.... ..+.+++.+.|++
T Consensus 264 Did~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l--------~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 264 DIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSV--------KQLYKELGYAFRK 334 (385)
T ss_dssp ESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHH--------HHHHHHHHHHHHT
T ss_pred ECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHH--------HHHHHHHHHHHhh
Confidence 999999999999999988877899999999997764 58999999765432 2111111 1146677778887
Q ss_pred --CCceEEEe
Q 042544 209 --AGFEVIWE 216 (305)
Q Consensus 209 --gG~~~i~~ 216 (305)
||.+.+.+
T Consensus 335 ~~g~~~~iit 344 (385)
T 3ldu_A 335 LKNWSYYLIT 344 (385)
T ss_dssp SBSCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 78777765
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.20 E-value=1.4e-10 Score=100.50 Aligned_cols=80 Identities=18% Similarity=0.325 Sum_probs=68.5
Q ss_pred HHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC---CC
Q 042544 94 LQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD---NS 168 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~ 168 (305)
..+.+.++.+|||+|||+|..+..+++. ..++|+++|+++.+++.++++++..++. +++++++|+..++... ++
T Consensus 96 ~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 96 MLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp HHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTT
T ss_pred HHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccccCC
Confidence 3567788999999999999999999964 3589999999999999999999998874 7999999998765332 57
Q ss_pred eeEEEe
Q 042544 169 FDAVYA 174 (305)
Q Consensus 169 fD~v~~ 174 (305)
||.|++
T Consensus 175 fD~Vl~ 180 (309)
T 2b9e_A 175 VHYILL 180 (309)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 999996
No 258
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.19 E-value=5e-11 Score=101.18 Aligned_cols=81 Identities=17% Similarity=0.152 Sum_probs=67.7
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC-C
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN-S 168 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~ 168 (305)
+.+...+.+.++ +|||||||+|.++..+++. +.+|+|+|+++.|++.+++++. ..+++++++|+.++++++. .
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~----~~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLS----GLPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTT----TSSEEEEESCGGGSCGGGSCT
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcC----CCCEEEEECChhhCChhhccC
Confidence 445556778888 9999999999999999986 6899999999999999998765 2479999999998877542 5
Q ss_pred eeEEEecc
Q 042544 169 FDAVYAIE 176 (305)
Q Consensus 169 fD~v~~~~ 176 (305)
+|.|+++.
T Consensus 111 ~~~iv~Nl 118 (271)
T 3fut_A 111 GSLLVANL 118 (271)
T ss_dssp TEEEEEEE
T ss_pred ccEEEecC
Confidence 78887754
No 259
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.15 E-value=5.6e-11 Score=102.45 Aligned_cols=81 Identities=15% Similarity=0.194 Sum_probs=67.8
Q ss_pred HHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CC---CC
Q 042544 94 LQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FP---DN 167 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~---~~ 167 (305)
..+.+.++.+|||+|||+|..+..+++. ++.+|+|+|+|+.|++.|++++...+ .+++++++|+..++ ++ .+
T Consensus 20 ~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 20 EFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp HHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCS
T ss_pred HhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCC
Confidence 3567778899999999999999999965 46899999999999999999988766 57999999998764 11 15
Q ss_pred CeeEEEecc
Q 042544 168 SFDAVYAIE 176 (305)
Q Consensus 168 ~fD~v~~~~ 176 (305)
+||.|++..
T Consensus 98 ~~D~Vl~D~ 106 (301)
T 1m6y_A 98 KVDGILMDL 106 (301)
T ss_dssp CEEEEEEEC
T ss_pred CCCEEEEcC
Confidence 799998743
No 260
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.14 E-value=1.4e-11 Score=104.10 Aligned_cols=88 Identities=17% Similarity=0.145 Sum_probs=69.8
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCH-------HHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNE-------YQITRGKELNRFAGVDKTCNFVKADFMKM-P 163 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~-------~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~ 163 (305)
+...+.+.++.+|||+|||+|..+..++.. +++|+|+|+|+ .+++.|++++...++..+++++++|+.++ +
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 333445556789999999999999999986 78999999999 99999988776666555699999999873 3
Q ss_pred -CCC--CCeeEEEecccccc
Q 042544 164 -FPD--NSFDAVYAIEATCH 180 (305)
Q Consensus 164 -~~~--~~fD~v~~~~~l~~ 180 (305)
+++ ++||+|++.-.+.+
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 444 68999999776655
No 261
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.14 E-value=8.6e-11 Score=106.52 Aligned_cols=116 Identities=18% Similarity=0.160 Sum_probs=81.1
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
+.+...+...++.+|||+|||+|.++..+++. +..+++|+|+++.+++.| .+++++++|+...+. ++
T Consensus 29 ~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~-~~ 97 (421)
T 2ih2_A 29 DFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEP-GE 97 (421)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCC-SS
T ss_pred HHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCc-cC
Confidence 44555565556779999999999999999964 468999999999998765 368999999987643 46
Q ss_pred CeeEEEecccccc----------cCChhhhhh------cCCCCC--cccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCH----------APDAAEIEI------GDGLPD--IRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~----------~~~~~~~~~------~~~~~~--~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|+++-.... +++...... ..+..+ ..+++.+.++|+|||.+++..
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 8999999643221 212211000 000000 136888999999999988865
No 262
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.08 E-value=2.8e-10 Score=95.60 Aligned_cols=73 Identities=21% Similarity=0.324 Sum_probs=61.2
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPD 166 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 166 (305)
.+.+...+.+.++.+|||||||+|.++..+++.+..+|+|+|+++.+++.++++ . ..+++++++|+..+++++
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~----~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G----DERLEVINEDASKFPFCS 92 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C----CTTEEEECSCTTTCCGGG
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c----CCCeEEEEcchhhCChhH
Confidence 344556777888999999999999999999976458999999999999999876 1 347999999999988764
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.05 E-value=4.9e-10 Score=95.58 Aligned_cols=71 Identities=11% Similarity=0.220 Sum_probs=59.4
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCe----EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTS----VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP 165 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~----v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 165 (305)
+.+...+.+.++.+|||||||+|.++..+++. +.+ |+|+|+++.|++.++++. ..+++++++|+.+++++
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFG 105 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGG
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChh
Confidence 44555677888999999999999999999965 344 999999999999999883 24799999999998765
Q ss_pred C
Q 042544 166 D 166 (305)
Q Consensus 166 ~ 166 (305)
+
T Consensus 106 ~ 106 (279)
T 3uzu_A 106 S 106 (279)
T ss_dssp G
T ss_pred H
Confidence 3
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.03 E-value=3.4e-09 Score=101.67 Aligned_cols=123 Identities=19% Similarity=0.275 Sum_probs=87.3
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhh-------------------------------------------cCCe
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQF-------------------------------------------SSTS 125 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-------------------------------------------~~~~ 125 (305)
...+....+..++.+|||.+||+|.+++..+.. +..+
T Consensus 179 Aa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~ 258 (703)
T 3v97_A 179 AAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSH 258 (703)
T ss_dssp HHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCcc
Confidence 345566677778889999999999999988742 1258
Q ss_pred EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCCCeeEEEecccccc-cCCh-hhhhhcCCCCCcccHHH
Q 042544 126 VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--FPDNSFDAVYAIEATCH-APDA-AEIEIGDGLPDIRSTRK 201 (305)
Q Consensus 126 v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~fD~v~~~~~l~~-~~~~-~~~~~~~~~~~~~~l~~ 201 (305)
|+|+|+++.+++.|++++...|+.+.+++.++|+.++. ..+++||+|+++--... +.+. ....+ ...+.+
T Consensus 259 i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~l------y~~l~~ 332 (703)
T 3v97_A 259 FYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIAL------HSLLGR 332 (703)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHH------HHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHH------HHHHHH
Confidence 99999999999999999999999878999999998863 33448999999754321 1111 11110 012333
Q ss_pred HHHHHHhCCceEEEec
Q 042544 202 CLEALKQAGFEVIWEK 217 (305)
Q Consensus 202 ~~~~L~~gG~~~i~~~ 217 (305)
+.+.+.|||.+.+.+.
T Consensus 333 ~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 333 IMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHCTTCEEEEEES
T ss_pred HHHhhCCCCeEEEEeC
Confidence 4444457998888764
No 265
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.03 E-value=2.6e-10 Score=97.54 Aligned_cols=99 Identities=13% Similarity=0.132 Sum_probs=68.3
Q ss_pred cCCCCCCeEEEEcCCC------ChHHHHHHhh-c-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEE-EEcCCCCCCCCC
Q 042544 96 LGLKSGQKVLDVGCGI------GGPLREIAQF-S-STSVTGLNNNEYQITRGKELNRFAGVDKTCNF-VKADFMKMPFPD 166 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~------G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~-~~~d~~~~~~~~ 166 (305)
+.++++.+|||+|||+ |. ..+++. + +++|+|+|+|+. + .++++ +++|+.+++++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------------~~v~~~i~gD~~~~~~~- 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------------SDADSTLIGDCATVHTA- 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------------CSSSEEEESCGGGCCCS-
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------------CCCEEEEECccccCCcc-
Confidence 4677899999999955 65 334433 3 589999999987 1 25889 99999987764
Q ss_pred CCeeEEEeccccccc----CChhhhhhcCCCCC-cccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHA----PDAAEIEIGDGLPD-IRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~----~~~~~~~~~~~~~~-~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++||+|++....... .+... .... ..+++++.++|||||.+++..
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~-----~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDS-----KEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCC-----CCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcccEEEEcCCccccccccccccc-----hHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 689999986432110 01000 0000 126889999999999999865
No 266
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.03 E-value=2e-10 Score=100.38 Aligned_cols=111 Identities=23% Similarity=0.216 Sum_probs=78.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC---CC----CCeEEEEcCCCCCCC----CCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG---VD----KTCNFVKADFMKMPF----PDNS 168 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~----~~~~~~~~d~~~~~~----~~~~ 168 (305)
++.+||+||||+|..+..+++.+..+|++||+++.+++.|++++...+ +. ++++++.+|+..+.- ++++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 568999999999999999987656899999999999999999865321 12 269999999987321 3578
Q ss_pred eeEEEecccc-cccCChhhhhhcCCCCCcccHHHH----HHHHHhCCceEEEe
Q 042544 169 FDAVYAIEAT-CHAPDAAEIEIGDGLPDIRSTRKC----LEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~----~~~L~~gG~~~i~~ 216 (305)
||+|++-..- ..-+.+.. +....+++.+ .++|+|||.+++..
T Consensus 268 fDvII~D~~d~P~~~~p~~------L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEE------DSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp EEEEEEECCSSCCCCC----------CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchh------hhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 9999985422 11111100 0011245666 89999999998865
No 267
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.02 E-value=6.5e-10 Score=99.30 Aligned_cols=75 Identities=19% Similarity=0.263 Sum_probs=64.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhc--CCCCCeEEEEcCCCCC-CC-CCCCeeEEEe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFA--GVDKTCNFVKADFMKM-PF-PDNSFDAVYA 174 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~~~~~~d~~~~-~~-~~~~fD~v~~ 174 (305)
.++.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|++++... ++ .+++++++|+.+. +. ++++||+|++
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 35889999999999999999876 789999999999999999999887 76 5899999999874 32 2357999998
Q ss_pred c
Q 042544 175 I 175 (305)
Q Consensus 175 ~ 175 (305)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 4
No 268
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.02 E-value=4.3e-10 Score=94.64 Aligned_cols=90 Identities=17% Similarity=0.129 Sum_probs=68.5
Q ss_pred HHHHHHcCCCCC--CeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC--------CCCCeEEEEcCC
Q 042544 90 HFLALQLGLKSG--QKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG--------VDKTCNFVKADF 159 (305)
Q Consensus 90 ~~l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--------~~~~~~~~~~d~ 159 (305)
+.+...+.+.++ .+|||+|||+|..+..++.. +++|+++|+++.+.+.+++.++... +..+++++++|+
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 455556777777 89999999999999999976 7799999999998777766554321 224689999998
Q ss_pred CC-CCCCCCCeeEEEecccccc
Q 042544 160 MK-MPFPDNSFDAVYAIEATCH 180 (305)
Q Consensus 160 ~~-~~~~~~~fD~v~~~~~l~~ 180 (305)
.+ ++...++||+|++.-.+.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCC
T ss_pred HHHHHhCcccCCEEEEcCCCCC
Confidence 76 3322246999998766654
No 269
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.01 E-value=2.8e-10 Score=101.29 Aligned_cols=101 Identities=16% Similarity=-0.021 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhc---------------CCCCCeEEEEcCCCCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFA---------------GVDKTCNFVKADFMKMP 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~---------------~~~~~~~~~~~d~~~~~ 163 (305)
++.+|||+|||+|..++.++.. ++.+|+++|+++.+++.++++++.. ++. +++++++|+..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 5789999999999999999965 4578999999999999999999888 664 4999999987632
Q ss_pred -CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 -FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 -~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+.||+|++. ... .... +++.+.+.|++||.+++..
T Consensus 126 ~~~~~~fD~I~lD-P~~---~~~~-----------~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLD-PFG---SPME-----------FLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEEC-CSS---CCHH-----------HHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeC-CCC---CHHH-----------HHHHHHHhcCCCCEEEEEe
Confidence 113579999843 211 1111 5888999999999877754
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.01 E-value=3.7e-10 Score=100.59 Aligned_cols=103 Identities=13% Similarity=-0.057 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cC-CeEEEEcCCHHHHHHHHHHHHhcCCCCC-eEEEEcCCCCC-C-CCCCCeeEEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SS-TSVTGLNNNEYQITRGKELNRFAGVDKT-CNFVKADFMKM-P-FPDNSFDAVY 173 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~-~~~~~~d~~~~-~-~~~~~fD~v~ 173 (305)
.++.+|||++||+|.+++.++.. .+ .+|+++|+++.+++.++++++..++.++ ++++++|+.++ . ...+.||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 36789999999999999999964 24 6899999999999999999999988766 99999998653 1 1145799998
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.- . ..... +++.+.+.|++||.++++.
T Consensus 131 lDP-~---g~~~~-----------~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F---GTPVP-----------FIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S---SCCHH-----------HHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C---cCHHH-----------HHHHHHHHhCCCCEEEEEe
Confidence 753 1 11111 5888999999999887765
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.98 E-value=1.3e-09 Score=101.59 Aligned_cols=126 Identities=13% Similarity=0.018 Sum_probs=89.0
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc-------------------CCeEEEEcCCHHHHHHHHHHHHhcCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS-------------------STSVTGLNNNEYQITRGKELNRFAGVDK 150 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 150 (305)
..+...+.+.++.+|||.|||+|.++..+++.. ...++|+|+++.++..|+.++...+...
T Consensus 159 ~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 159 KTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 344555667778899999999999998887431 2479999999999999999887766643
Q ss_pred ----CeEEEEcCCCCCC-CCCCCeeEEEecccccccCChhhhhhcCCCC----CcccHHHHHHHHHhCCceEEEe
Q 042544 151 ----TCNFVKADFMKMP-FPDNSFDAVYAIEATCHAPDAAEIEIGDGLP----DIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 151 ----~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~----~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+.+.++|....+ .+.+.||+|+++-.+....... .....+.+ ...++..+.+.|+|||++.+..
T Consensus 239 ~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~-~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 239 NLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTN-ITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp BGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCC-CCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCCeEeCCCcccccccccCCeEEEECCCcccccchh-hHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 2788999987633 3456899999976554332211 00000000 1237899999999999988765
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.97 E-value=5e-10 Score=94.21 Aligned_cols=81 Identities=12% Similarity=0.123 Sum_probs=62.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCe--EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTS--VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~--v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
+.+...+.+.++.+|||||||+|.++. ++. +.+ |+|+|+++.|++.++++.... ++++++++|+..+++++.
T Consensus 11 ~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 11 DSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHh
Confidence 445556677888999999999999999 654 456 999999999999998865432 479999999998776431
Q ss_pred -----CeeEEEecc
Q 042544 168 -----SFDAVYAIE 176 (305)
Q Consensus 168 -----~fD~v~~~~ 176 (305)
..|.|+++.
T Consensus 85 ~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 85 AEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHTSCEEEEEEC
T ss_pred hcccCCceEEEECC
Confidence 235666543
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.91 E-value=2.6e-09 Score=99.46 Aligned_cols=126 Identities=18% Similarity=0.070 Sum_probs=87.5
Q ss_pred HHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc----------------CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeE
Q 042544 90 HFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS----------------STSVTGLNNNEYQITRGKELNRFAGVDKTCN 153 (305)
Q Consensus 90 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~ 153 (305)
++|...+.+.++ +|||.+||||.++..+++.. ...++|+|+++.++..|+.++...++..++.
T Consensus 235 ~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~ 313 (544)
T 3khk_A 235 TLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFG 313 (544)
T ss_dssp HHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCC
T ss_pred HHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccc
Confidence 444555566555 99999999999988875321 4689999999999999999988878765555
Q ss_pred EEEcCCCCCC-CCCCCeeEEEecccccc--cCChhh---hhhcCC--------C-----CCcccHHHHHHHHHhCCceEE
Q 042544 154 FVKADFMKMP-FPDNSFDAVYAIEATCH--APDAAE---IEIGDG--------L-----PDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 154 ~~~~d~~~~~-~~~~~fD~v~~~~~l~~--~~~~~~---~~~~~~--------~-----~~~~~l~~~~~~L~~gG~~~i 214 (305)
+.++|....+ +++.+||+|+++-.+.. ...... .....+ + ..+.++..+.+.|+|||++.+
T Consensus 314 i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ai 393 (544)
T 3khk_A 314 KKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMAL 393 (544)
T ss_dssp SSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEE
T ss_pred eeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEE
Confidence 5888876544 45678999999755432 111100 000011 1 123478999999999999877
Q ss_pred Ee
Q 042544 215 WE 216 (305)
Q Consensus 215 ~~ 216 (305)
..
T Consensus 394 Vl 395 (544)
T 3khk_A 394 LL 395 (544)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 274
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.88 E-value=1.3e-08 Score=82.06 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC--CCCeEEEEcCCCCC---------------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV--DKTCNFVKADFMKM--------------- 162 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~d~~~~--------------- 162 (305)
+..+|||+|| |..+..+++.++++|+.+|.++...+.|+++++..|. .++++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5679999998 5788888864479999999999999999999999887 77899999997542
Q ss_pred C--------C-CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 163 P--------F-PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 163 ~--------~-~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
+ . ..++||+|+.-.-.. .. .+..+.+.|+|||++++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k~-----~~-----------~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRFR-----VG-----------CALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSSH-----HH-----------HHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCCCc-----hh-----------HHHHHHHhcCCCeEEEE
Confidence 1 1 236899999764211 11 46667799999998865
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.85 E-value=6.8e-09 Score=97.36 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=74.3
Q ss_pred CCCeEEEEcCCCChHHHHH---HhhcC--CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 100 SGQKVLDVGCGIGGPLREI---AQFSS--TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l---~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
.+..|||+|||+|.+.... ++..+ .+|++||-|+ |...+++.....++.++|+++++|++++..| +++|+|++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 3457999999999884443 33323 3789999997 5667888888889989999999999998776 67999998
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCce
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFE 212 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~ 212 (305)
-.+=..+-.... +..+....+.|||||.+
T Consensus 435 EwMG~fLl~E~m---------levL~Ardr~LKPgGim 463 (637)
T 4gqb_A 435 ELLGSFADNELS---------PECLDGAQHFLKDDGVS 463 (637)
T ss_dssp CCCBTTBGGGCH---------HHHHHHHGGGEEEEEEE
T ss_pred EcCcccccccCC---------HHHHHHHHHhcCCCcEE
Confidence 554222222211 11466667889999975
No 276
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.82 E-value=2.5e-08 Score=92.65 Aligned_cols=119 Identities=19% Similarity=0.158 Sum_probs=86.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh----cCCeEEEEcCCHHHHHHHHHHHHhcCCC-CCeEEEEcCCCCC--C-CCCCCe
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF----SSTSVTGLNNNEYQITRGKELNRFAGVD-KTCNFVKADFMKM--P-FPDNSF 169 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~--~-~~~~~f 169 (305)
..++.+|||.+||+|.++..+++. ....++|+|+++.++..|+.++...|.. .++.+.++|.... | .+...|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 356789999999999999888754 2579999999999999999998877764 3678999998765 3 346789
Q ss_pred eEEEecccccccC--Chhhh---hhc-CC-C-----CCcccHHHHHHHHH-hCCceEEEe
Q 042544 170 DAVYAIEATCHAP--DAAEI---EIG-DG-L-----PDIRSTRKCLEALK-QAGFEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~--~~~~~---~~~-~~-~-----~~~~~l~~~~~~L~-~gG~~~i~~ 216 (305)
|+|+++-.+..-. +.... .+. .+ + ..+.++..+.+.|+ +||++.+..
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 9999975443211 11000 000 11 1 12347899999999 999987754
No 277
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.76 E-value=2e-08 Score=83.92 Aligned_cols=114 Identities=13% Similarity=0.034 Sum_probs=72.1
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 96 LGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
..++++.+|||+|||+|.|+..+++. +...|.|+|++..+....... .. ...++..+..+++...++++.||+|+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~--~g~~ii~~~~~~dv~~l~~~~~DlVls 146 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QS--LGWNIITFKDKTDIHRLEPVKCDTLLC 146 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CB--TTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-Cc--CCCCeEEEeccceehhcCCCCccEEEe
Confidence 45678889999999999999998854 345788888874331000000 00 011455566766555677789999999
Q ss_pred cccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEec
Q 042544 175 IEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWEK 217 (305)
Q Consensus 175 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~~ 217 (305)
..+.+ -........ ..+..++.+.++|+|| |.+++...
T Consensus 147 D~apn-sG~~~~D~~----rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 147 DIGES-SSSSVTEGE----RTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CCCCC-CSCHHHHHH----HHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCccC-cCchHHHHH----HHHHHHHHHHHHhCCCCCeEEEEec
Confidence 76555 222211000 0012367888999999 99999653
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.73 E-value=5.2e-08 Score=82.93 Aligned_cols=111 Identities=21% Similarity=0.238 Sum_probs=83.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhc-CCeEEEEcCCHHHHHHHHHHHHhc--C--CCCCeEEEEcCCCCC-CCCCCCeeEE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFS-STSVTGLNNNEYQITRGKELNRFA--G--VDKTCNFVKADFMKM-PFPDNSFDAV 172 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~--~~~~~~~~~~d~~~~-~~~~~~fD~v 172 (305)
+...+||=||.|.|..++.+.+.+ ..+|+.+||++.+++.+++.+... + -+++++++.+|+..+ .-..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 345799999999999999999764 479999999999999999986432 1 146899999999873 3456789999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.-.. ++.. ....+-...+++.++++|+|||+++...
T Consensus 162 i~D~~-----dp~~--~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCT-----DPIG--PGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCC-----CCCC--TTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCC-----CcCC--CchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 86432 1110 1112333447999999999999999864
No 279
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.66 E-value=5.5e-08 Score=85.56 Aligned_cols=127 Identities=20% Similarity=0.189 Sum_probs=88.4
Q ss_pred HHcCCCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCC-----CCeEEEEcCCCCCC-CCC
Q 042544 94 LQLGLKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVD-----KTCNFVKADFMKMP-FPD 166 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~-----~~~~~~~~d~~~~~-~~~ 166 (305)
..+++.+|.+|||+++|.|.=+..+++. .+..|+++|+++.-+...++++.+.+.. .++.+...|...++ ...
T Consensus 142 ~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~ 221 (359)
T 4fzv_A 142 LALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEG 221 (359)
T ss_dssp HHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHST
T ss_pred HHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcc
Confidence 3578899999999999999999999864 3458999999999999999998877643 46888888887643 345
Q ss_pred CCeeEEEe----cc----cccccCChhhh---hhcCCCC--CcccHHHHHHHHHhCCceEEEeccCC
Q 042544 167 NSFDAVYA----IE----ATCHAPDAAEI---EIGDGLP--DIRSTRKCLEALKQAGFEVIWEKDLA 220 (305)
Q Consensus 167 ~~fD~v~~----~~----~l~~~~~~~~~---~~~~~~~--~~~~l~~~~~~L~~gG~~~i~~~~~~ 220 (305)
+.||.|++ +. ++..-++.... .....+. ....+..+.+.|||||.++.++..+.
T Consensus 222 ~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 222 DTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp TCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 78999995 22 11111211000 0000000 01257788889999999999987554
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.66 E-value=1.6e-08 Score=94.78 Aligned_cols=103 Identities=13% Similarity=0.057 Sum_probs=71.3
Q ss_pred CCeEEEEcCCCChHHHHH---Hhhc-----------CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC-
Q 042544 101 GQKVLDVGCGIGGPLREI---AQFS-----------STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP- 165 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l---~~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 165 (305)
+..|||||||+|.++... ++.. ..+|++||-|+.+....+.+.. .++.++|+++.+|++++..|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 468999999999996432 2211 2499999999977755555443 67778899999999987653
Q ss_pred ----CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceE
Q 042544 166 ----DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEV 213 (305)
Q Consensus 166 ----~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~ 213 (305)
.+.+|+|++-..=....+.... ..+..+.+.|+|||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~p---------e~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSP---------ECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHH---------HHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccH---------HHHHHHHHhCCCCcEEE
Confidence 4789999986653322222111 13566678899999643
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.66 E-value=7.4e-08 Score=80.99 Aligned_cols=78 Identities=21% Similarity=0.274 Sum_probs=64.8
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CCC
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FPD 166 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~ 166 (305)
+.+.+.+.++..+||++||.|..+..+++. +++|+|+|.++.+++.|++ +.. +++.++++++.+++ ...
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTC
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCC
Confidence 334667888999999999999999999976 7899999999999999988 543 47999999998753 223
Q ss_pred CCeeEEEec
Q 042544 167 NSFDAVYAI 175 (305)
Q Consensus 167 ~~fD~v~~~ 175 (305)
+++|.|++.
T Consensus 88 ~~vDgIL~D 96 (285)
T 1wg8_A 88 ERVDGILAD 96 (285)
T ss_dssp SCEEEEEEE
T ss_pred CCcCEEEeC
Confidence 579999963
No 282
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.62 E-value=2.6e-08 Score=83.25 Aligned_cols=115 Identities=16% Similarity=0.001 Sum_probs=70.6
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
...+.++.+|||||||+|.|+..++. .+...|+|+|++..+...+... .. ...++.....+.....++.+.+|+|+
T Consensus 85 K~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~--~g~~ii~~~~~~dv~~l~~~~~DvVL 161 (282)
T 3gcz_A 85 RGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TT--LGWNLIRFKDKTDVFNMEVIPGDTLL 161 (282)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CB--TTGGGEEEECSCCGGGSCCCCCSEEE
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-cc--CCCceEEeeCCcchhhcCCCCcCEEE
Confidence 34667888999999999999999884 4445799999986542211100 00 01123334433332334568899999
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC--CceEEEec
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA--GFEVIWEK 217 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g--G~~~i~~~ 217 (305)
|-.+.. -........ ..+..++-+.++|+|| |.+++...
T Consensus 162 SDmApn-sG~~~~D~~----rs~~LL~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 162 CDIGES-SPSIAVEEQ----RTLRVLNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp ECCCCC-CSCHHHHHH----HHHHHHHHHHHHHHHHCCCEEEEEES
T ss_pred ecCccC-CCChHHHHH----HHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 976665 332211100 0012366678999999 99999763
No 283
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.56 E-value=1.8e-07 Score=82.75 Aligned_cols=116 Identities=14% Similarity=-0.018 Sum_probs=74.4
Q ss_pred CCeEEEEcCCCChHHHHHHhh------------------cCCeEEEEcCC-----------HHHHHHHHHHHHhcCCCCC
Q 042544 101 GQKVLDVGCGIGGPLREIAQF------------------SSTSVTGLNNN-----------EYQITRGKELNRFAGVDKT 151 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~------------------~~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~~~ 151 (305)
..+|+|+||++|..+..+... |..+|+.-|+. +.+.+..++. .+...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCC
Confidence 578999999999999887633 34678888987 5444443221 222122
Q ss_pred eEEEEcCCCC---CCCCCCCeeEEEecccccccCChhhh-hh------cCC------CCCc---------------ccHH
Q 042544 152 CNFVKADFMK---MPFPDNSFDAVYAIEATCHAPDAAEI-EI------GDG------LPDI---------------RSTR 200 (305)
Q Consensus 152 ~~~~~~d~~~---~~~~~~~fD~v~~~~~l~~~~~~~~~-~~------~~~------~~~~---------------~~l~ 200 (305)
..|+.+.... ..||++++|+|+++.++|++.+.... .- ..+ ..+. .+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566655443 46889999999999999998764211 00 000 0000 1255
Q ss_pred HHHHHHHhCCceEEEeccC
Q 042544 201 KCLEALKQAGFEVIWEKDL 219 (305)
Q Consensus 201 ~~~~~L~~gG~~~i~~~~~ 219 (305)
...+.|+|||.+++.....
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHHHEEEEEEEEEEEECC
T ss_pred HHHHHhccCCeEEEEEecC
Confidence 5589999999999976543
No 284
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.53 E-value=3.7e-07 Score=80.69 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=73.7
Q ss_pred CCeEEEEcCCCChHHHHHHh---------h-------cCCeEEEEcCCHHHHHHHHHHHHhcC-----------CCCCeE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---------F-------SSTSVTGLNNNEYQITRGKELNRFAG-----------VDKTCN 153 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---------~-------~~~~v~gvD~s~~~l~~a~~~~~~~~-----------~~~~~~ 153 (305)
..+|+|+|||+|..+..+.. . +..+|..-|+........-+.+.... ...+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57999999999999988721 1 35688888887766544433332210 000112
Q ss_pred E---EEcCCCCCCCCCCCeeEEEecccccccCChhh-hhh------cCC-------CCC-------------cccHHHHH
Q 042544 154 F---VKADFMKMPFPDNSFDAVYAIEATCHAPDAAE-IEI------GDG-------LPD-------------IRSTRKCL 203 (305)
Q Consensus 154 ~---~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~~~------~~~-------~~~-------------~~~l~~~~ 203 (305)
| +.+.+..-.+|+++||+|+++.++|++.+... +.- ..+ .+. ..+++...
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 33344445688999999999999999975421 100 000 000 01467779
Q ss_pred HHHHhCCceEEEec
Q 042544 204 EALKQAGFEVIWEK 217 (305)
Q Consensus 204 ~~L~~gG~~~i~~~ 217 (305)
+.|+|||.+++...
T Consensus 213 ~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 213 AEVKRGGAMFLVCL 226 (374)
T ss_dssp HHEEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEEe
Confidence 99999999998764
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.47 E-value=6.1e-07 Score=78.43 Aligned_cols=88 Identities=14% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEA 177 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 177 (305)
+.+|++|||+||++|.|+..+++. +++|+|||+.+-. ... . ..++++++++|+..+..+.+.+|+|+|-.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~-~~l----~---~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMA-QSL----M---DTGQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCC-HHH----H---TTTCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcC-hhh----c---cCCCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 578999999999999999999986 7899999987421 111 1 135799999999987766778999998544
Q ss_pred ccccCChhhhhhcCCCCCcccHHHHHHHHHhC
Q 042544 178 TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA 209 (305)
Q Consensus 178 l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g 209 (305)
. .+.. .+..+.++|..+
T Consensus 280 ~----~p~~-----------~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 E----KPAK-----------VAALMAQWLVNG 296 (375)
T ss_dssp S----CHHH-----------HHHHHHHHHHTT
T ss_pred C----ChHH-----------hHHHHHHHHhcc
Confidence 3 3333 366667777766
No 286
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.47 E-value=2.1e-07 Score=69.96 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=53.3
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCCC-hHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC
Q 042544 86 KRHEHFLALQLGLKSGQKVLDVGCGIG-GPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF 164 (305)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~vLDiGcG~G-~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 164 (305)
+...+++.... .++.+|||||||.| ..+..|++..+..|+++|+++..++ +++.|+.+ |.
T Consensus 23 e~LaeYI~~~~--~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~-P~ 83 (153)
T 2k4m_A 23 NDLAVYIIRCS--GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITS-PR 83 (153)
T ss_dssp HHHHHHHHHHS--CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSS-CC
T ss_pred HHHHHHHHhcC--CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCC-Cc
Confidence 34445555443 34579999999999 6999999755899999999886542 88899987 32
Q ss_pred CC--CCeeEEEecc
Q 042544 165 PD--NSFDAVYAIE 176 (305)
Q Consensus 165 ~~--~~fD~v~~~~ 176 (305)
.+ ..||+|++..
T Consensus 84 ~~~Y~~~DLIYsir 97 (153)
T 2k4m_A 84 MEIYRGAALIYSIR 97 (153)
T ss_dssp HHHHTTEEEEEEES
T ss_pred ccccCCcCEEEEcC
Confidence 22 3799998754
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.44 E-value=1.8e-06 Score=82.31 Aligned_cols=118 Identities=10% Similarity=-0.037 Sum_probs=75.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhc----CCeEEEEcCCHHHHHHH--HHHHHhcCCC---CCeEEEEcCCCCCC-CCCCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFS----STSVTGLNNNEYQITRG--KELNRFAGVD---KTCNFVKADFMKMP-FPDNS 168 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~----~~~v~gvD~s~~~l~~a--~~~~~~~~~~---~~~~~~~~d~~~~~-~~~~~ 168 (305)
.++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.++....+. ....+...|+.... .....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 467899999999999999998643 25799999999999999 4443321111 12355556665532 23578
Q ss_pred eeEEEecccccc-cCChhhh-----hhc----------CCCC--CcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCH-APDAAEI-----EIG----------DGLP--DIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~-~~~~~~~-----~~~----------~~~~--~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
||+|+++--... ....... .+. .+.. ...++..+.+.|++||.+.+..
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 999999765422 1111100 000 0101 1236888999999999988865
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.40 E-value=1.3e-07 Score=79.54 Aligned_cols=106 Identities=14% Similarity=0.081 Sum_probs=69.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh--------hcC-----CeEEEEcCCH---HHHH-----------HHHHHHHhcC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ--------FSS-----TSVTGLNNNE---YQIT-----------RGKELNRFAG----- 147 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~--------~~~-----~~v~gvD~s~---~~l~-----------~a~~~~~~~~----- 147 (305)
+..+|||||||+|..+..+++ .+. .+++++|..| .++. .|++.+....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 557999999999998888653 232 4899999876 5544 4555554310
Q ss_pred -----C---CCCeEEEEcCCCC-CCCCC----CCeeEEEecc-cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceE
Q 042544 148 -----V---DKTCNFVKADFMK-MPFPD----NSFDAVYAIE-ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEV 213 (305)
Q Consensus 148 -----~---~~~~~~~~~d~~~-~~~~~----~~fD~v~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~ 213 (305)
+ ..+++++.+|+.+ ++..+ ..||+|+.-. .-...|+. ....+++.+.++|+|||.++
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~l---------w~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDM---------WTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGG---------CCHHHHHHHHHHEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhh---------cCHHHHHHHHHHcCCCcEEE
Confidence 1 1357899999876 44222 2799999742 22222221 01226999999999999887
Q ss_pred E
Q 042544 214 I 214 (305)
Q Consensus 214 i 214 (305)
.
T Consensus 211 t 211 (257)
T 2qy6_A 211 T 211 (257)
T ss_dssp E
T ss_pred E
Confidence 5
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.40 E-value=4.4e-07 Score=77.09 Aligned_cols=104 Identities=10% Similarity=0.108 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhh------cCCeEEEEcCCH--------------------------HHHHHHHHHHHhcC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF------SSTSVTGLNNNE--------------------------YQITRGKELNRFAG 147 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~------~~~~v~gvD~s~--------------------------~~l~~a~~~~~~~~ 147 (305)
....|||+||..|..+..++.. ++.+|+++|... ..++.++++++..|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 3469999999999999988742 368999999642 14677899999988
Q ss_pred CC-CCeEEEEcCCCC-CC-CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 148 VD-KTCNFVKADFMK-MP-FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 148 ~~-~~~~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+. ++++++.+|+.+ +| +++++||+|+.-.-. + ... ...++.+...|+|||++++.+
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~-y--~~~----------~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL-Y--EST----------WDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS-H--HHH----------HHHHHHHGGGEEEEEEEEESS
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc-c--ccH----------HHHHHHHHhhcCCCEEEEEcC
Confidence 84 789999999976 44 445789999865421 0 110 115888899999999888743
No 290
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.28 E-value=5.8e-07 Score=78.86 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=78.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-----------------cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEE---cC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-----------------SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVK---AD 158 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---~d 158 (305)
+...+|+|+||++|..+..+... |..+|+..|+........-+.+.......+..|+. +.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999887765422 34689999999888887766554311001234444 44
Q ss_pred CCCCCCCCCCeeEEEecccccccCChhh-hh-------hcCCCCC-c-------------ccHHHHHHHHHhCCceEEEe
Q 042544 159 FMKMPFPDNSFDAVYAIEATCHAPDAAE-IE-------IGDGLPD-I-------------RSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 159 ~~~~~~~~~~fD~v~~~~~l~~~~~~~~-~~-------~~~~~~~-~-------------~~l~~~~~~L~~gG~~~i~~ 216 (305)
+....||++++|+|+++.++|++.+... +. +....+. + .+|+...+.|+|||.+++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 4446789999999999999999875321 00 0000000 0 13777899999999999875
Q ss_pred c
Q 042544 217 K 217 (305)
Q Consensus 217 ~ 217 (305)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.25 E-value=5.7e-06 Score=69.30 Aligned_cols=113 Identities=19% Similarity=0.153 Sum_probs=71.2
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEc-CCCCCCCCCCCeeEE
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKA-DFMKMPFPDNSFDAV 172 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~v 172 (305)
...+.++.+||||||++|.|+..++...+ .+|+|+|+...-.+. -......+. .-+.+..+ |+..++. .++|.|
T Consensus 89 ~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~~--~~~D~i 164 (321)
T 3lkz_A 89 RRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRPS--ECCDTL 164 (321)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSCC--CCCSEE
T ss_pred hcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCCC--CCCCEE
Confidence 35667888999999999999998885434 479999997651100 000001122 23778877 8876653 569999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~ 216 (305)
+|--. ..-+++...+. ..+++|+-+.++|++| |-+++..
T Consensus 165 vcDig-eSs~~~~ve~~----Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 165 LCDIG-ESSSSAEVEEH----RTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp EECCC-CCCSCHHHHHH----HHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred EEECc-cCCCChhhhhh----HHHHHHHHHHHHhccCCCcEEEEE
Confidence 98655 54454421110 0123566667889988 8777754
No 292
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.20 E-value=1.2e-05 Score=74.59 Aligned_cols=127 Identities=15% Similarity=0.206 Sum_probs=85.2
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCCChHHHHHHhhc--------------CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEE
Q 042544 89 EHFLALQLGLKSGQKVLDVGCGIGGPLREIAQFS--------------STSVTGLNNNEYQITRGKELNRFAGVDKTCNF 154 (305)
Q Consensus 89 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 154 (305)
.+++...+.+.++.+|+|-+||||.++....++. ...++|+|+++.+...|+.++.-.|.. ...+
T Consensus 206 v~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I 284 (530)
T 3ufb_A 206 VRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRI 284 (530)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEE
T ss_pred HHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccc
Confidence 3455667778888999999999999988765421 257999999999999999887666653 3567
Q ss_pred EEcCCCCCCC----CCCCeeEEEecccccccCChhhh-hhcCC----CCCcccHHHHHHHHH-------hCCceEEEe
Q 042544 155 VKADFMKMPF----PDNSFDAVYAIEATCHAPDAAEI-EIGDG----LPDIRSTRKCLEALK-------QAGFEVIWE 216 (305)
Q Consensus 155 ~~~d~~~~~~----~~~~fD~v~~~~~l~~~~~~~~~-~~~~~----~~~~~~l~~~~~~L~-------~gG~~~i~~ 216 (305)
.++|....|. +...||+|+++-.+.--...... ..... -....++..+.+.|+ +||++.+..
T Consensus 285 ~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 285 DPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp ECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred cccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 7888765442 23579999997655322211110 00000 011235777888886 689887764
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.16 E-value=8.2e-06 Score=70.18 Aligned_cols=47 Identities=23% Similarity=0.152 Sum_probs=42.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFA 146 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 146 (305)
.++..|||++||+|..+..++.. +.+++|+|+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 57889999999999999998875 789999999999999999998765
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.15 E-value=2e-06 Score=75.51 Aligned_cols=111 Identities=22% Similarity=0.182 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC---C----CCCeEEEEcCCCCCC----CCCC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG---V----DKTCNFVKADFMKMP----FPDN 167 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~----~~~~~~~~~d~~~~~----~~~~ 167 (305)
.+..+||=||.|.|..++++.+++..+|+.|||++.+++.+++.+.... . .++++++.+|+..+- -..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 3567999999999999999997767899999999999999998753211 1 235889999986531 1246
Q ss_pred CeeEEEecccccc-cCCh-----hhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCH-APDA-----AEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~-~~~~-----~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+||+|+.-..-.. -+++ ... ...+++.++++|+|||.++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lf-------t~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEF-------LRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHH-------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHH-------HHHHHHHHHHhcCCCCEEEEec
Confidence 7999986422110 0111 110 0125788999999999988753
No 295
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.11 E-value=1.6e-06 Score=73.01 Aligned_cols=113 Identities=14% Similarity=0.044 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
+.++.+|||+||++|.|+..+++. ....|.|+|++..+...... ... ...++.....+.....++.+.+|+|+|-.
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~--~~~~iv~~~~~~di~~l~~~~~DlVlsD~ 155 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT--LGWNIVKFKDKSNVFTMPTEPSDTLLCDI 155 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB--TTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc--cCCceEEeecCceeeecCCCCcCEEeecC
Confidence 468899999999999999999964 33578999997543110000 000 01123333333332334567899999965
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEecc
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWEKD 218 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~~~ 218 (305)
+.. -........ ..+..+.-+.++|+|| |.+++....
T Consensus 156 APn-sG~~~~D~~----rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 156 GES-SSNPLVERD----RTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCC-CSSHHHHHH----HHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCC-CCCHHHHHH----HHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 544 332211100 0012366678899999 999997643
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.01 E-value=3.4e-05 Score=63.55 Aligned_cols=106 Identities=19% Similarity=0.148 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHhhcC-CeEEEEcCCHH--HHHHHHHHHHhcCCCCCe---EEEEc-CCCCCCCCCCCe
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIAQFSS-TSVTGLNNNEY--QITRGKELNRFAGVDKTC---NFVKA-DFMKMPFPDNSF 169 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~--~l~~a~~~~~~~~~~~~~---~~~~~-d~~~~~~~~~~f 169 (305)
-++|+.+|||+||+.|.|+...++..+ ..|.|.++... +.. .......+ .+.++ |+.+++ ...+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P-------~~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEP-------MLMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCC-------CCCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCC-------CcccCCCceEEEeeccCCccCCC--CCCC
Confidence 467899999999999999999986522 23344443322 100 00000233 44447 998743 4579
Q ss_pred eEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCC-ceEEEe
Q 042544 170 DAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAG-FEVIWE 216 (305)
Q Consensus 170 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG-~~~i~~ 216 (305)
|+|+|-.+-. -........ ..+.+++-+.++|+||| -+++..
T Consensus 141 DvVLSDMAPn-SG~~~vD~~----Rs~~aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQ----RTLRILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHH----HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEeCCCCC-CCccHHHHH----HHHHHHHHHHHHhhcCCcEEEEEE
Confidence 9999865543 222211000 00114666678999999 788865
No 297
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.94 E-value=1.2e-05 Score=69.12 Aligned_cols=80 Identities=15% Similarity=0.142 Sum_probs=63.0
Q ss_pred HHHHcCCCCCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C
Q 042544 92 LALQLGLKSGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F 164 (305)
Q Consensus 92 l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~ 164 (305)
+...+.+.++..++|..||.|..+..+++. +.++|+|+|.++.+++.++ ++ ...+++++++++.++. .
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhc
Confidence 344678889999999999999999999964 4689999999999999884 33 1358999999998752 1
Q ss_pred C-CCCeeEEEecc
Q 042544 165 P-DNSFDAVYAIE 176 (305)
Q Consensus 165 ~-~~~fD~v~~~~ 176 (305)
. .+++|.|+...
T Consensus 124 g~~~~vDgILfDL 136 (347)
T 3tka_A 124 DLIGKIDGILLDL 136 (347)
T ss_dssp TCTTCEEEEEEEC
T ss_pred CCCCcccEEEECC
Confidence 1 13699998743
No 298
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.82 E-value=4.3e-05 Score=61.98 Aligned_cols=112 Identities=20% Similarity=0.190 Sum_probs=67.3
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhhcC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEc-CCCCCCCCCCCeeEE
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQFSS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKA-DFMKMPFPDNSFDAV 172 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~fD~v 172 (305)
...+.++.+|||+||++|.|+...+...+ .+|+|+|+...-.+. -......|. +.++|..+ |+..++ ..++|.|
T Consensus 73 k~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~~--~~~~Dtl 148 (267)
T 3p8z_A 73 RNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYLP--PEKCDTL 148 (267)
T ss_dssp TTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGCC--CCCCSEE
T ss_pred hcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeecC--CccccEE
Confidence 33667889999999999999998885433 579999996543210 000112233 36899999 986654 3669999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|-..- .-+++...+. ..+++++-+.++|++ |-+++..
T Consensus 149 lcDIge-Ss~~~~vE~~----RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 149 LCDIGE-SSPSPTVEES----RTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp EECCCC-CCSCHHHHHH----HHHHHHHHHGGGCSS-CEEEEEE
T ss_pred EEecCC-CCCChhhhhh----HHHHHHHHHHHhccc-CCEEEEE
Confidence 985433 2233211000 002234445566777 6666643
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.56 E-value=0.00022 Score=59.87 Aligned_cols=48 Identities=15% Similarity=0.111 Sum_probs=42.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG 147 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 147 (305)
.++..|||..||+|..+...... +.+++|+|+++..++.+++++...+
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 67889999999999999988775 8899999999999999999987543
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.42 E-value=0.00061 Score=59.57 Aligned_cols=59 Identities=15% Similarity=-0.009 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM 162 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 162 (305)
++..|||||.|.|.+|..|++. ...+|+++|+++..+...++.. . .++++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 3589999999999999999964 2468999999999998887765 2 35799999999654
No 301
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.41 E-value=4.5e-05 Score=82.57 Aligned_cols=103 Identities=17% Similarity=0.109 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhc------CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCCCCCeeE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFS------STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFPDNSFDA 171 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 171 (305)
.+..+|||||.|||..+..+.... ..+++..|+|+...+.+++++... .+.....|..+. ++..++||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 357899999999998766654321 247889999998887777765542 122222233331 334567999
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
|++.+++|-.++... ++.+++++|+|||++++.+
T Consensus 1315 via~~vl~~t~~~~~-----------~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1315 LVCNCALATLGDPAV-----------AVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEECC-------------------------------CCEEEEEE
T ss_pred EEEcccccccccHHH-----------HHHHHHHhcCCCcEEEEEe
Confidence 999999986666544 6999999999999988865
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.18 E-value=0.00033 Score=58.76 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=62.3
Q ss_pred HcCCCCCCeEEEEcC------CCChHHHHHHhhc-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCC
Q 042544 95 QLGLKSGQKVLDVGC------GIGGPLREIAQFS-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDN 167 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc------G~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 167 (305)
.+-++.+++|||+|+ -.|.+...-. .+ ++.|+++|+.+-.. ... .++++|...... .+
T Consensus 104 ~~~vp~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~s------------da~-~~IqGD~~~~~~-~~ 168 (344)
T 3r24_A 104 TLAVPYNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFVS------------DAD-STLIGDCATVHT-AN 168 (344)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCBC------------SSS-EEEESCGGGEEE-SS
T ss_pred cEeecCCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCccccc------------CCC-eEEEcccccccc-CC
Confidence 355678999999996 5666422211 23 36999999976331 112 559999766433 47
Q ss_pred CeeEEEeccc---ccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 168 SFDAVYAIEA---TCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 168 ~fD~v~~~~~---l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
+||+|++-.+ -.+ .+....... .+ -..+++-+.+.|+|||.+++...
T Consensus 169 k~DLVISDMAPNtTG~-~D~d~~Rs~-~L-~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 169 KWDLIISDMYDPRTKH-VTKENDSKE-GF-FTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp CEEEEEECCCCTTSCS-SCSCCCCCC-TH-HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCEEEecCCCCcCCc-cccchhHHH-HH-HHHHHHHHHHhCcCCCEEEEEEe
Confidence 8999998543 112 111110000 00 00145567789999999999763
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.11 E-value=0.0021 Score=55.88 Aligned_cols=108 Identities=9% Similarity=0.140 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcC--------------------CCCCeEEEEc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAG--------------------VDKTCNFVKA 157 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~--------------------~~~~~~~~~~ 157 (305)
.+...|+.+|||.......+... ++.+++-||. |..++.-++.+...+ ..++..++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35578999999999988888753 5678888888 888877777665531 1357899999
Q ss_pred CCCCCCC---------CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 158 DFMKMPF---------PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 158 d~~~~~~---------~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
|+.+..+ ..+...++++-.++.+++...... +++.+.+.+ |+|.+++.+.
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~---------ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQL---------LINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHH---------HHHHHHHHC-SSEEEEEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHH---------HHHHHHhhC-CCcEEEEEec
Confidence 9987321 234578999999999999876543 466666655 7777766553
No 304
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.68 E-value=0.0052 Score=55.05 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHH-hh-cC-CeEEEEcCCHHHHHHHHHHHHh--cCCC-CCeEEEEcCCC
Q 042544 97 GLKSGQKVLDVGCGIGGPLREIA-QF-SS-TSVTGLNNNEYQITRGKELNRF--AGVD-KTCNFVKADFM 160 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~G~~~~~l~-~~-~~-~~v~gvD~s~~~l~~a~~~~~~--~~~~-~~~~~~~~d~~ 160 (305)
.++++..|+||||+.|.++..++ +. +. ++|+++|++|...+..++++.. .+.. .+++++..-+.
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 45788999999999999999988 43 22 7999999999999999999887 2222 56777665554
No 305
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.60 E-value=0.0068 Score=54.01 Aligned_cols=102 Identities=15% Similarity=0.098 Sum_probs=66.8
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C------C
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P------F 164 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~------~ 164 (305)
....+.++.+||-+|||. |..+..+++..++ +|+++|.++..++.+++ .|. +++..+-.++ . .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~~~~~~ 250 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF----ETIDLRNSAPLRDQIDQIL 250 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC----EEEETTSSSCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----cEEcCCCcchHHHHHHHHh
Confidence 356788999999999986 7888888865577 99999999998887754 232 3332211111 0 0
Q ss_pred CCCCeeEEEecccccc---------cCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 165 PDNSFDAVYAIEATCH---------APDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~---------~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
....+|+|+-.-.-.. .+.. ..+..+.++|+++|.+++.
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPN------------GALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTT------------HHHHHHHHHEEEEEEEECC
T ss_pred CCCCCCEEEECCCCccccccccccccccH------------HHHHHHHHHHhcCCEEEEe
Confidence 1226999985432211 1111 1488899999999988764
No 306
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.42 E-value=0.03 Score=48.06 Aligned_cols=104 Identities=12% Similarity=0.000 Sum_probs=73.8
Q ss_pred CeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCC--CCCeEEEEcCCCCCC---------CCCCCee
Q 042544 102 QKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGV--DKTCNFVKADFMKMP---------FPDNSFD 170 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~~~~~~~d~~~~~---------~~~~~fD 170 (305)
..|++||||-=.....+....+.+++-+| -|..++..++.+...+. ..+..++.+|+.+ . +..+..-
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 47999999976665554421247999999 49999988888875432 4567899999986 3 2223455
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
++++-.+++|+++..... +++.+...+.||+++++..
T Consensus 182 ~~i~Egvl~Yl~~~~~~~---------ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDG---------LFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp EEEECSCGGGSCHHHHHH---------HHHHHHHTCCTTCEEEEEC
T ss_pred EEEEechHhhCCHHHHHH---------HHHHHHHhCCCCeEEEEEe
Confidence 788888999999875433 5677777667887777753
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.34 E-value=0.0013 Score=58.02 Aligned_cols=99 Identities=13% Similarity=0.168 Sum_probs=66.3
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----CCCC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----PFPD 166 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~ 166 (305)
....+.++.+||-+|||. |..+..+++..++ +|+++|.++..++.+++. |.. .++..+-.++ ....
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~~~~ 256 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKEITD 256 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHHhcC
Confidence 346788999999999985 7788888865577 799999999998888653 321 2222211110 0112
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+.+|+|+-.-. ... .+..+.+.|+++|.+++.-
T Consensus 257 gg~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 257 GGVNFALESTG-----SPE------------ILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp SCEEEEEECSC-----CHH------------HHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEeC
Confidence 36999874322 111 4788899999999987753
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.20 E-value=0.012 Score=51.38 Aligned_cols=94 Identities=19% Similarity=0.157 Sum_probs=66.4
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEE
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVY 173 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 173 (305)
...+.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++ .+...+ . ..+|+|+
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~~~--~-~~~D~vi 239 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK---HFY-TDPKQC--K-EELDFII 239 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS---EEE-SSGGGC--C-SCEEEEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC---eec-CCHHHH--h-cCCCEEE
Confidence 45788999999999875 777888886668999999999998887765 3432 222 333322 2 2699997
Q ss_pred ecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 174 AIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 174 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
-.-. ... .+....+.|+++|.+++.-
T Consensus 240 d~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 240 STIP-----THY------------DLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp ECCC-----SCC------------CHHHHHTTEEEEEEEEECC
T ss_pred ECCC-----cHH------------HHHHHHHHHhcCCEEEEEC
Confidence 5321 111 4788889999999988753
No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.07 E-value=0.03 Score=49.77 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=67.2
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CC------CC
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MP------FP 165 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~------~~ 165 (305)
...+.++.+||-+|||. |..+..+++..++ +|+++|.++..++.+++ .|. +.+...-.+ +. ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~ 251 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLG 251 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHS
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhC
Confidence 45788999999999875 7788888865577 79999999999888765 232 222211111 00 01
Q ss_pred CCCeeEEEeccccc---------ccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATC---------HAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~---------~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+-.-.-. |.+++.. .+..+.++|+++|.+++.-
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPAT-----------VLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTH-----------HHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEECCCCcccccccccccccchHH-----------HHHHHHHHHhcCCEEEEec
Confidence 23699998543211 1222222 4888999999999987643
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.97 E-value=0.0058 Score=53.92 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=66.8
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----C---
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----P--- 163 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~--- 163 (305)
....+.++.+||=+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++...-.++ .
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~~ 248 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPVG 248 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTTS
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhhh
Confidence 456788999999999874 6777778866677 999999999998887763 332 1221111110 0
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+.+|+|+-.- .... .+..+.++|+++|.+++..
T Consensus 249 ~~~gg~Dvvid~~-----G~~~------------~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 249 LVPGGVDVVIECA-----GVAE------------TVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SSTTCEEEEEECS-----CCHH------------HHHHHHHHEEEEEEEEECS
T ss_pred ccCCCCCEEEECC-----CCHH------------HHHHHHHHhccCCEEEEEe
Confidence 2234799998532 1111 4888999999999988753
No 311
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.86 E-value=0.023 Score=49.93 Aligned_cols=97 Identities=20% Similarity=0.165 Sum_probs=66.7
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CCCC
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FPDN 167 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~ 167 (305)
...+.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++. |.. .++..+-.++. ....
T Consensus 184 ~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 184 KGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp TTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHTTC
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhCCC
Confidence 46778999999999874 6777777766689999999999988887653 332 22222211110 1123
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+|+|+-.-. .. .+..+.+.|+++|.+++..
T Consensus 257 g~D~vid~~g-----~~-------------~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-----GA-------------GLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-----SS-------------CHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-----hH-------------HHHHHHHHhhcCCEEEEEe
Confidence 6999885432 11 4788899999999988764
No 312
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.83 E-value=0.026 Score=49.27 Aligned_cols=99 Identities=13% Similarity=0.071 Sum_probs=66.8
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----C-CC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----P-FP 165 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~-~~ 165 (305)
....+.++.+||=+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++..+-.++ . ..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT---DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC---EEECGGGSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc---eEEcCCCcCHHHHHHHHcC
Confidence 456788999999999874 7777778866677 899999999988887764 322 2222111111 0 12
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+-.-. .+. .+..+.+.|+++|.+++.-
T Consensus 233 g~g~D~v~d~~g-----~~~------------~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 233 GKGVDKVVIAGG-----DVH------------TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TCCEEEEEECSS-----CTT------------HHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCC-----ChH------------HHHHHHHHHhcCCEEEEec
Confidence 236999985321 111 4888999999999988753
No 313
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.83 E-value=0.028 Score=49.61 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=52.5
Q ss_pred CeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC--------CCCCeeEE
Q 042544 102 QKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF--------PDNSFDAV 172 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~~fD~v 172 (305)
.++||+-||.|.++..+... +. .|.++|+++..++..+.+. +...++++|+.++.. ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999999865 55 4669999999988777653 246788899887631 23579999
Q ss_pred Eecc
Q 042544 173 YAIE 176 (305)
Q Consensus 173 ~~~~ 176 (305)
+...
T Consensus 76 ~ggp 79 (376)
T 3g7u_A 76 IGGP 79 (376)
T ss_dssp EECC
T ss_pred EecC
Confidence 9743
No 314
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.78 E-value=0.0074 Score=53.22 Aligned_cols=96 Identities=24% Similarity=0.248 Sum_probs=64.2
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-C-CCCCCCeeE
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-M-PFPDNSFDA 171 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~-~~~~~~fD~ 171 (305)
.+.+.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++. |.. .++...-.+ . ... +.+|+
T Consensus 189 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 189 HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTTT-TCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHhh-cCCCE
Confidence 35788999999999974 7777788866688999999999988887652 322 222111000 0 111 46899
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
|+-.-.- .. .+..+.+.|+++|.+++.
T Consensus 261 vid~~g~-----~~------------~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 261 ILNTVAA-----PH------------NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEECCSS-----CC------------CHHHHHTTEEEEEEEEEC
T ss_pred EEECCCC-----HH------------HHHHHHHHhccCCEEEEe
Confidence 8754221 10 477788999999988764
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.73 E-value=0.022 Score=49.24 Aligned_cols=49 Identities=8% Similarity=-0.128 Sum_probs=42.5
Q ss_pred CCCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcC
Q 042544 98 LKSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAG 147 (305)
Q Consensus 98 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 147 (305)
..++..|||.-||+|..+...... +.+.+|+|+++..++.+++++...+
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERE-SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc-CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 367899999999999988887765 8999999999999999999876544
No 316
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.67 E-value=0.0059 Score=51.30 Aligned_cols=74 Identities=9% Similarity=-0.077 Sum_probs=58.2
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-C---CCCCCCeeEEEecc
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-M---PFPDNSFDAVYAIE 176 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~---~~~~~~fD~v~~~~ 176 (305)
+..+||+=+|||.+++.+.+. +.+++.+|.++..++..++++.. ..+++++..|... + .-+..+||+|++--
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 457999999999999998873 68999999999999988887754 3579999999754 2 12345799998754
Q ss_pred cc
Q 042544 177 AT 178 (305)
Q Consensus 177 ~l 178 (305)
..
T Consensus 168 PY 169 (283)
T 2oo3_A 168 SY 169 (283)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 317
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.66 E-value=0.019 Score=45.50 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=61.2
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
..++.++.+||.+|+ |.|..+..++...+++|+++|.++..++.+++ .+.. ..+ |..+.. .
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~~ 103 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVE---YVG--DSRSVDFADEILELT 103 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCS---EEE--ETTCSTHHHHHHHHT
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---EEe--eCCcHHHHHHHHHHh
Confidence 356788999999995 45666666665458899999999988766543 2321 111 322211 1
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
....+|+|+.+-. .. .+..+.+.|+++|.+++.
T Consensus 104 ~~~~~D~vi~~~g-----~~-------------~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 104 DGYGVDVVLNSLA-----GE-------------AIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTCCEEEEEECCC-----TH-------------HHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEECCc-----hH-------------HHHHHHHHhccCCEEEEE
Confidence 1236899985432 11 478889999999988774
No 318
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.60 E-value=0.063 Score=44.59 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=65.6
Q ss_pred CeEEEEcCCCChHHHHHHhh--------cCCeEEEEc-----CCH----------------------HHHHHH---HHHH
Q 042544 102 QKVLDVGCGIGGPLREIAQF--------SSTSVTGLN-----NNE----------------------YQITRG---KELN 143 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~--------~~~~v~gvD-----~s~----------------------~~l~~a---~~~~ 143 (305)
..|+|+||-.|..+..++.. +..+|+++| +.+ ..+... .++.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 48999999999988887631 357999999 321 112211 1112
Q ss_pred HhcCC-CCCeEEEEcCCCC-CC-----CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 144 RFAGV-DKTCNFVKADFMK-MP-----FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 144 ~~~~~-~~~~~~~~~d~~~-~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+..+. .++++++.+++.+ +| .+..+||+|+.-.-. + .+. ...++.+...|+|||++++.+
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y--~~t----------~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y--EPT----------KAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H--HHH----------HHHHHHHGGGEEEEEEEEESS
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c--chH----------HHHHHHHHHHhCCCcEEEEcC
Confidence 23344 4789999999976 33 245579999865421 1 111 114777888899999988854
No 319
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.57 E-value=0.029 Score=48.37 Aligned_cols=47 Identities=17% Similarity=0.072 Sum_probs=40.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCH---HHHHHHHHHHHhc
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNE---YQITRGKELNRFA 146 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~---~~l~~a~~~~~~~ 146 (305)
.++..|||.-||+|..+...... +.+.+|+|+++ ..++.+++++...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 57889999999999999887765 88999999999 9999999987654
No 320
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.45 E-value=0.015 Score=50.72 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=52.0
Q ss_pred CeEEEEcCCCChHHHHHHhhcC---CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC---CCCCeeEEEec
Q 042544 102 QKVLDVGCGIGGPLREIAQFSS---TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF---PDNSFDAVYAI 175 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v~~~ 175 (305)
.+|||+.||.|.++..+... + ..|.++|+++.+++..+.+.. ...++.+|+.++.. +...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 58999999999999999865 4 368999999999998888742 34577888887531 11258999874
Q ss_pred c
Q 042544 176 E 176 (305)
Q Consensus 176 ~ 176 (305)
.
T Consensus 76 p 76 (343)
T 1g55_A 76 P 76 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 321
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.36 E-value=0.012 Score=50.47 Aligned_cols=92 Identities=15% Similarity=0.215 Sum_probs=61.8
Q ss_pred HHcCCCCCCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEE
Q 042544 94 LQLGLKSGQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAV 172 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 172 (305)
....+.++.+||=+|+| .|..+..+++..+++|++++ ++..++.+++. |.. .++ .|...+ .+.+|+|
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga~---~v~-~d~~~v---~~g~Dvv 203 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GVR---HLY-REPSQV---TQKYFAI 203 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TEE---EEE-SSGGGC---CSCEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CCC---EEE-cCHHHh---CCCccEE
Confidence 45678899999999996 47788888866688999999 98888887663 321 222 242223 4679999
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+-.-.-. .+..+.++|+++|.++..
T Consensus 204 ~d~~g~~------------------~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNSQ------------------NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC-------------------------TTGGGEEEEEEEEEE
T ss_pred EECCCch------------------hHHHHHHHhcCCCEEEEE
Confidence 8432111 134456788999998876
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.29 E-value=0.015 Score=50.84 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=65.3
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC-CCCC------CC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF-MKMP------FP 165 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~-~~~~------~~ 165 (305)
...++.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++..+- .++. ..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhc
Confidence 456788999999999874 677777776568899999999998887764 2332 2222110 1110 01
Q ss_pred ---CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 ---DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ---~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+..-. ... .+....++|+++|.+++..
T Consensus 235 ~~~g~g~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 235 SAIGDLPNVTIDCSG-----NEK------------CITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHSSSCCSEEEECSC-----CHH------------HHHHHHHHSCTTCEEEECS
T ss_pred cccCCCCCEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEEe
Confidence 245898875321 111 3778889999999988753
No 323
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.13 E-value=0.027 Score=48.89 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=64.0
Q ss_pred HHcCCCCCCeEEEEcCC--CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CC
Q 042544 94 LQLGLKSGQKVLDVGCG--IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FP 165 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~ 165 (305)
....+.++.+||-+|+| .|..+..+++..+++|+++|.++..++.+++. |.. .++...-.++. ..
T Consensus 138 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~~~~~~ 210 (340)
T 3gms_A 138 ETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETVMELTN 210 (340)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHHHHHhC
Confidence 35678899999999987 56777777765689999999999888877663 322 12211111110 12
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+.+-.- . ...+..+.|+++|.+++.-
T Consensus 211 ~~g~Dvvid~~g~-----~-------------~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 211 GIGADAAIDSIGG-----P-------------DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp TSCEEEEEESSCH-----H-------------HHHHHHHTEEEEEEEEECC
T ss_pred CCCCcEEEECCCC-----h-------------hHHHHHHHhcCCCEEEEEe
Confidence 2469999754221 1 2344558899999988753
No 324
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.04 E-value=0.26 Score=43.45 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=36.1
Q ss_pred HcCCCCCCeEEEEcCCCChHHHHHHhh--------cCCeEEEEcCCHHHHHHHHHHH
Q 042544 95 QLGLKSGQKVLDVGCGIGGPLREIAQF--------SSTSVTGLNNNEYQITRGKELN 143 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~G~~~~~l~~~--------~~~~v~gvD~s~~~l~~a~~~~ 143 (305)
.++.+..-.|+|+|.|+|.++..+.+. ...+++.||+|+...+.-++++
T Consensus 75 ~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 75 AADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp HTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred HcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 344445567999999999998887632 1248999999998877555544
No 325
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.98 E-value=0.068 Score=46.17 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=64.2
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CCCC
Q 042544 96 LGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FPDN 167 (305)
Q Consensus 96 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~ 167 (305)
..+.++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++ .|.. .++..+-.++. ....
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHTTTS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHHhCCC
Confidence 46789999999994 45667777776568999999999998887765 2321 22222111110 1134
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+|+|+.+-.- . .+..+.+.|+++|.+++.-
T Consensus 217 g~D~vid~~g~-----~-------------~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVGK-----D-------------TFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCGG-----G-------------GHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCh-----H-------------HHHHHHHHhccCCEEEEEc
Confidence 69999854321 1 4888899999999988753
No 326
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.93 E-value=0.088 Score=46.04 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=67.1
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCe-EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCC--CC------C
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSSTS-VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFM--KM------P 163 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~--~~------~ 163 (305)
....+.++.+||=+|+|. |..+..+++..+++ |+++|.++..++.+++. . ..-+.+...+.. ++ .
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHHH
Confidence 456788999999999874 77778888666776 99999999999988875 2 111222211110 00 0
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.....+|+|+-.-. .+. .+..+.++|+++|.+++.-
T Consensus 248 t~g~g~Dvvid~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 248 FGGIEPAVALECTG-----VES------------SIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp TSSCCCSEEEECSC-----CHH------------HHHHHHHHSCTTCEEEECC
T ss_pred hCCCCCCEEEECCC-----ChH------------HHHHHHHHhcCCCEEEEEc
Confidence 12346899875321 111 4788899999999988753
No 327
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=94.92 E-value=0.055 Score=46.76 Aligned_cols=68 Identities=15% Similarity=0.070 Sum_probs=49.3
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC-CCCeeEEEecc
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP-DNSFDAVYAIE 176 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~v~~~~ 176 (305)
+.++||+.||.|.++..+.......|.++|+++..++..+.+.... . ++|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECC
Confidence 5799999999999999988652345778999999998888775321 1 5777764311 12489998754
No 328
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.87 E-value=0.054 Score=46.65 Aligned_cols=97 Identities=15% Similarity=0.193 Sum_probs=64.8
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CCC
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FPD 166 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~ 166 (305)
...+.++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++. |.. .++..+-.++. ...
T Consensus 135 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~~~~~~~~ 207 (325)
T 3jyn_A 135 TYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GAW---ETIDYSHEDVAKRVLELTDG 207 (325)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTTT
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEeCCCccHHHHHHHHhCC
Confidence 356788999999983 457777777765689999999999988887653 321 22221111110 122
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
..+|+|+.+-.- . .+..+.+.|+++|.+++..
T Consensus 208 ~g~Dvvid~~g~-----~-------------~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYDGVGQ-----D-------------TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CCEEEEEESSCG-----G-------------GHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCCh-----H-------------HHHHHHHHhcCCCEEEEEe
Confidence 469998854321 1 4778889999999988754
No 329
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.79 E-value=0.038 Score=47.75 Aligned_cols=95 Identities=20% Similarity=0.290 Sum_probs=62.7
Q ss_pred HHcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CC-------
Q 042544 94 LQLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MP------- 163 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~------- 163 (305)
....+.++.+||-.|| |.|..+..++...+++|+++|.++..++.+++ .+.. .. .|..+ -.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~--~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFD---AA--FNYKTVNSLEEALKK 209 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EE--EETTSCSCHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCc---EE--EecCCHHHHHHHHHH
Confidence 3457788999999998 46666666665558899999999988877733 2321 11 13222 11
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
...+.+|+++.+-.- . .+....+.|+++|.+++.
T Consensus 210 ~~~~~~d~vi~~~g~-----~-------------~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 210 ASPDGYDCYFDNVGG-----E-------------FLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HCTTCEEEEEESSCH-----H-------------HHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCeEEEECCCh-----H-------------HHHHHHHHHhcCCEEEEE
Confidence 112468998755321 1 367788899999988774
No 330
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.73 E-value=0.1 Score=45.15 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=63.6
Q ss_pred HcCCCCCCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC------CC
Q 042544 95 QLGLKSGQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP------DN 167 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------~~ 167 (305)
..++.++.+||-+|+| .|..+..+++..+++|+++|.++..++.+++ .|.. .+ .|..+..+. .+
T Consensus 159 ~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~--~d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 159 VTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LV--VNPLKEDAAKFMKEKVG 229 (339)
T ss_dssp HHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EE--ECTTTSCHHHHHHHHHS
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EE--ecCCCccHHHHHHHHhC
Confidence 3477889999999986 4667777776568899999999998887754 2321 11 233221110 03
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
.+|+|+..-. ... .++...+.|+++|.+++.
T Consensus 230 ~~d~vid~~g-----~~~------------~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 230 GVHAAVVTAV-----SKP------------AFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp SEEEEEESSC-----CHH------------HHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCC-----CHH------------HHHHHHHHhhcCCEEEEe
Confidence 5898875422 111 478888999999988764
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.66 E-value=0.051 Score=47.18 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=65.4
Q ss_pred HHcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CC
Q 042544 94 LQLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FP 165 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~ 165 (305)
....+.++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++. |.. .++..+ .++. ..
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga~---~v~~~~-~~~~~~v~~~~~ 224 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GAD---IVLPLE-EGWAKAVREATG 224 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEESS-TTHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEecCc-hhHHHHHHHHhC
Confidence 3457788999999997 457777778866689999999999888877663 322 222222 2110 12
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+.+-.- . .+..+.+.|+++|.+++..
T Consensus 225 ~~g~Dvvid~~g~-----~-------------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 225 GAGVDMVVDPIGG-----P-------------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TSCEEEEEESCC--------------------CHHHHHHTEEEEEEEEEC-
T ss_pred CCCceEEEECCch-----h-------------HHHHHHHhhcCCCEEEEEE
Confidence 2369999854321 1 3778889999999988753
No 332
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.65 E-value=0.012 Score=51.17 Aligned_cols=93 Identities=15% Similarity=0.134 Sum_probs=62.6
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHhhc--CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEE----cCC-CCCCCCCCC
Q 042544 97 GLKSGQKVLDVGCGI-GGPLREIAQFS--STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVK----ADF-MKMPFPDNS 168 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~----~d~-~~~~~~~~~ 168 (305)
.+ ++.+||-+|+|. |..+..+++.. +++|+++|.|+..++.+++. |.. .++. .|. ..+. ....
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHH-TTCC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhh-cCCC
Confidence 67 899999999974 66777788666 89999999999998887653 322 1221 111 0111 1236
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+|+-.-. ... .++.+.+.|+++|.+++.
T Consensus 239 ~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 239 ASIAIDLVG-----TEE------------TTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEEESSC-----CHH------------HHHHHHHHEEEEEEEEEC
T ss_pred ccEEEECCC-----ChH------------HHHHHHHHhhcCCEEEEe
Confidence 899985422 111 478889999999988774
No 333
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.54 E-value=0.044 Score=47.41 Aligned_cols=98 Identities=15% Similarity=0.113 Sum_probs=64.2
Q ss_pred HHcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----CCCC
Q 042544 94 LQLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----PFPD 166 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~ 166 (305)
....+.++.+||-+|+ |.|..+..+++..+++|++++.++..++.+.+. .|.. .++...-.++ ....
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~g~~---~~~~~~~~~~~~~~~~~~~ 216 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---LGFD---GAIDYKNEDLAAGLKRECP 216 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---TCCS---EEEETTTSCHHHHHHHHCT
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCC---EEEECCCHHHHHHHHHhcC
Confidence 4567889999999998 456777777765688999999999888776322 2321 1221111110 0112
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+.+|+|+.+-.- . .+..+.+.|+++|.+++.
T Consensus 217 ~~~d~vi~~~g~-----~-------------~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 217 KGIDVFFDNVGG-----E-------------ILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp TCEEEEEESSCH-----H-------------HHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCCc-----c-------------hHHHHHHHHhhCCEEEEE
Confidence 469998754321 1 377888999999998875
No 334
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.51 E-value=0.15 Score=44.26 Aligned_cols=94 Identities=22% Similarity=0.283 Sum_probs=64.5
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------CC
Q 042544 96 LGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------FP 165 (305)
Q Consensus 96 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~ 165 (305)
.++.++.+||-+|+ |.|..+..++...+++|+++|.++..++.+++. |.. .++ |..+.. ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD---ETV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC---EEE--cCCcccHHHHHHHHhC
Confidence 46788999999998 567778888765688999999999988877642 321 122 222111 11
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
...+|+|+..-. . . .+..+.+.|+++|.+++..
T Consensus 233 ~~~~d~vi~~~g-~---~--------------~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 233 GKGADKVVDHTG-A---L--------------YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp TTCEEEEEESSC-S---S--------------SHHHHHHHEEEEEEEEESS
T ss_pred CCCceEEEECCC-H---H--------------HHHHHHHhhccCCEEEEEe
Confidence 246899885432 1 1 4788899999999877643
No 335
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.46 E-value=0.015 Score=51.24 Aligned_cols=97 Identities=16% Similarity=0.241 Sum_probs=63.4
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCC-----CCC
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKM-----PFP 165 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~~ 165 (305)
...+.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+- .++ ...
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 258 (374)
T 2jhf_A 186 VAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEMS 258 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHT
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHHh
Confidence 45778899999999874 6677777765577 89999999998887754 2332 1221110 010 011
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEE
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIW 215 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~ 215 (305)
.+.+|+|+-.-. ... .+....++|+++ |.+++.
T Consensus 259 ~~g~D~vid~~g-----~~~------------~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 259 NGGVDFSFEVIG-----RLD------------TMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp TSCBSEEEECSC-----CHH------------HHHHHHHHBCTTTCEEEEC
T ss_pred CCCCcEEEECCC-----CHH------------HHHHHHHHhhcCCcEEEEe
Confidence 236898874321 111 478889999999 988764
No 336
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.46 E-value=0.0088 Score=52.87 Aligned_cols=99 Identities=21% Similarity=0.317 Sum_probs=65.0
Q ss_pred HHcCCCCCCeEEEEcCC-CChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcC--CCCC-----CC
Q 042544 94 LQLGLKSGQKVLDVGCG-IGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKAD--FMKM-----PF 164 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d--~~~~-----~~ 164 (305)
....+.++.+||=+|+| .|..+..+++..++ +|+++|.++..++.+++ .|.. .++... -.++ ..
T Consensus 187 ~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~ 259 (378)
T 3uko_A 187 NTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIVDL 259 (378)
T ss_dssp TTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHHHh
Confidence 44677889999999987 37777778865577 89999999998887764 3332 222111 0110 01
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~ 216 (305)
.++.+|+|+-.- ..+. .+..+.+.|++| |.+++.-
T Consensus 260 ~~gg~D~vid~~-----g~~~------------~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 260 TDGGVDYSFECI-----GNVS------------VMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp TTSCBSEEEECS-----CCHH------------HHHHHHHTBCTTTCEEEECS
T ss_pred cCCCCCEEEECC-----CCHH------------HHHHHHHHhhccCCEEEEEc
Confidence 123689987532 1211 478889999997 9887753
No 337
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=94.41 E-value=0.06 Score=46.71 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=63.5
Q ss_pred HHcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CC------
Q 042544 94 LQLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PF------ 164 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~------ 164 (305)
....+.++.+||-+|| |.|..+..++...+++|++++.++..++.+++. .|.. .++ |..+. .+
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAF--NYKEESDLTAALKR 220 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEE--ETTSCSCSHHHHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCCHHHHHHHHHH
Confidence 3457788999999997 466777777765588999999999888776532 2321 122 22211 11
Q ss_pred -CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 165 -PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 165 -~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
..+.+|+|+.+-. .. .+....+.|+++|.+++.
T Consensus 221 ~~~~~~d~vi~~~g-----~~-------------~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 221 CFPNGIDIYFENVG-----GK-------------MLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HCTTCEEEEEESSC-----HH-------------HHHHHHTTEEEEEEEEEC
T ss_pred HhCCCCcEEEECCC-----HH-------------HHHHHHHHHhcCCEEEEE
Confidence 1246899875432 11 377888899999988774
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.38 E-value=0.015 Score=51.23 Aligned_cols=99 Identities=19% Similarity=0.277 Sum_probs=64.3
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCC-----CC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKM-----PF 164 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~ 164 (305)
...++.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++...- .++ ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHHHH
Confidence 345778899999999864 6677777765577 899999999988887653 332 1221110 010 01
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~ 216 (305)
..+.+|+|+-.-. ... .+..+.+.|+++ |.+++.-
T Consensus 257 ~~~g~D~vid~~g-----~~~------------~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 257 TDGGVDYSFECIG-----NVK------------VMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp TTSCBSEEEECSC-----CHH------------HHHHHHHTBCTTTCEEEECS
T ss_pred hCCCCCEEEECCC-----cHH------------HHHHHHHhhccCCcEEEEEe
Confidence 1236898874321 111 478889999999 9887743
No 339
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.28 E-value=0.14 Score=44.69 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=64.7
Q ss_pred HcCCCCCCeEEEEc--CCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----CCCCC
Q 042544 95 QLGLKSGQKVLDVG--CGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----PFPDN 167 (305)
Q Consensus 95 ~~~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~ 167 (305)
...+.++.+||-+| .|.|..+..+++..+++|++++.++..++.+++ .|.. .++..+-.++ .....
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHCTT
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhcCC
Confidence 45778999999999 357778888886568899999999988877765 2322 1222111110 00124
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+|+|+.+-. .. .++.+.++|+++|.+++..
T Consensus 231 g~D~vid~~g-----~~-------------~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 231 GVDVVYESVG-----GA-------------MFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CEEEEEECSC-----TH-------------HHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC-----HH-------------HHHHHHHHHhcCCEEEEEe
Confidence 6899885432 11 4788899999999887743
No 340
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.91 E-value=0.31 Score=43.29 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CCCCC
Q 042544 97 GLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FPDNS 168 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~ 168 (305)
.+.++.+||=+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++..+-.++. .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 578899999999863 6677777765677 999999999999888764 322 22211111110 11236
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHH----HhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEAL----KQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L----~~gG~~~i~~ 216 (305)
+|+|+-.- ..... .+..+.+.| +++|.+++.-
T Consensus 283 ~D~vid~~-----g~~~~-----------~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEAT-----GVPQL-----------VWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECS-----SCHHH-----------HHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECC-----CCcHH-----------HHHHHHHHHHhccCCCcEEEEeC
Confidence 89887432 22211 356677777 9999988753
No 341
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.91 E-value=0.12 Score=45.05 Aligned_cols=95 Identities=19% Similarity=0.245 Sum_probs=63.0
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
..++.++.+||-.|+ |.|..+..++...+++|++++.++..++.+++ .+.. .++ |..+.. .
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~--d~~~~~~~~~~~~~~ 235 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAH---EVF--NHREVNYIDKIKKYV 235 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEE--ETTSTTHHHHHHHHH
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCC---EEE--eCCCchHHHHHHHHc
Confidence 457788999999997 45666777775568999999999988876654 2321 122 222111 1
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+|+|+.+-.- . .+....++|+++|.+++..
T Consensus 236 ~~~~~D~vi~~~G~-----~-------------~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 236 GEKGIDIIIEMLAN-----V-------------NLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CTTCEEEEEESCHH-----H-------------HHHHHHHHEEEEEEEEECC
T ss_pred CCCCcEEEEECCCh-----H-------------HHHHHHHhccCCCEEEEEe
Confidence 12368998754321 1 3677889999999987753
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.78 E-value=0.15 Score=44.31 Aligned_cols=96 Identities=21% Similarity=0.244 Sum_probs=63.2
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-------- 163 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-------- 163 (305)
...++ ++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. |.. .++ |..+..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~--~~~~~~~~~~v~~~ 231 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVI--NPFEEDVVKEVMDI 231 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEE--CTTTSCHHHHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEE--CCCCcCHHHHHHHH
Confidence 34567 899999999963 6677777765577 999999999988877653 321 122 221111
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.....+|+|+..-. ... .+..+.+.|+++|.++...
T Consensus 232 ~~g~g~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 232 TDGNGVDVFLEFSG-----APK------------ALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TTTSCEEEEEECSC-----CHH------------HHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCCEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEEc
Confidence 11235899875422 111 4788899999999887753
No 343
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.70 E-value=0.17 Score=44.04 Aligned_cols=95 Identities=13% Similarity=0.151 Sum_probs=62.7
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
..++.++.+||-+|+ |.|..+..++...+++|+++|.++..++.+++. +.. ..+ |..+.. .
T Consensus 157 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 157 VGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGF--NYKKEDFSEATLKFT 227 (354)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHHT
T ss_pred hcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEE--ecCChHHHHHHHHHh
Confidence 456788999999984 456666677755588999999999988877442 321 112 221111 1
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+|+|+.+-.- . .+....++|+++|.+++..
T Consensus 228 ~~~~~d~vi~~~G~-----~-------------~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 228 KGAGVNLILDCIGG-----S-------------YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TTSCEEEEEESSCG-----G-------------GHHHHHHHEEEEEEEEECC
T ss_pred cCCCceEEEECCCc-----h-------------HHHHHHHhccCCCEEEEEe
Confidence 12468998754321 1 3777889999999887753
No 344
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.63 E-value=0.077 Score=46.34 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=61.3
Q ss_pred cCCCCC------CeEEEEcCC-CChHH-HHHH-hhcCCe-EEEEcCCHH---HHHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 042544 96 LGLKSG------QKVLDVGCG-IGGPL-REIA-QFSSTS-VTGLNNNEY---QITRGKELNRFAGVDKTCNFVKADFMKM 162 (305)
Q Consensus 96 ~~~~~~------~~vLDiGcG-~G~~~-~~l~-~~~~~~-v~gvD~s~~---~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 162 (305)
..+.++ .+||-+|+| .|..+ ..++ +..+++ |+++|.++. .++.+++ .|. +.+ |..+-
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa----~~v--~~~~~ 231 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA----TYV--DSRQT 231 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC----EEE--ETTTS
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC----ccc--CCCcc
Confidence 445677 899999985 36677 7777 666776 999999987 7777654 232 222 33221
Q ss_pred CCC-----CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 163 PFP-----DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 163 ~~~-----~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+. .+.+|+|+-.-. ... .+..+.++|+++|.++..-
T Consensus 232 ~~~~i~~~~gg~Dvvid~~g-----~~~------------~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 232 PVEDVPDVYEQMDFIYEATG-----FPK------------HAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CGGGHHHHSCCEEEEEECSC-----CHH------------HHHHHHHHEEEEEEEEECC
T ss_pred CHHHHHHhCCCCCEEEECCC-----ChH------------HHHHHHHHHhcCCEEEEEe
Confidence 111 136898874321 111 4788899999999887743
No 345
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.52 E-value=0.17 Score=43.47 Aligned_cols=95 Identities=14% Similarity=0.207 Sum_probs=63.1
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
..++.++.+||-.|+ |.|..+..++...+++|+++|.++..++.+++. +.. .++ |..+.. .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW---QVI--NYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCccHHHHHHHHh
Confidence 457788999999994 456666666654588999999999888877652 321 122 222111 1
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+|+|+.+-. . . .++.+.++|+++|.+++..
T Consensus 206 ~~~~~D~vi~~~g------~-~-----------~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG------R-D-----------TWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC------G-G-----------GHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc------h-H-----------HHHHHHHHhcCCCEEEEEe
Confidence 1236899886532 1 1 4888899999999887653
No 346
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=93.41 E-value=0.078 Score=45.15 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=56.1
Q ss_pred CCCeEEEEcCCCChHHHHHH----h-hcCC--eEEEEcCCH--------H-HHHHHHHHHHhc----CCCCCeEEEEcCC
Q 042544 100 SGQKVLDVGCGIGGPLREIA----Q-FSST--SVTGLNNNE--------Y-QITRGKELNRFA----GVDKTCNFVKADF 159 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~-~~~~--~v~gvD~s~--------~-~l~~a~~~~~~~----~~~~~~~~~~~d~ 159 (305)
+.-+|||+|-|||..+.... + .+.. +++.+|..+ . .-+..+...... +..-.+++..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34689999999998654322 1 2344 455666321 1 111222222221 1111346788888
Q ss_pred CC-CC-CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 160 MK-MP-FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 160 ~~-~~-~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
.+ ++ +++..||+++.-. +.--.+|+ +....+++.++++++|||.+.-
T Consensus 176 ~~~l~~l~~~~~Da~flDg-FsP~kNPe-------LWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDA-FSPYKNPE-------LWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHGGGCCSCCEEEEEECC-SCTTTSGG-------GGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHhhhcccceeEEEeCC-CCcccCcc-------cCCHHHHHHHHHHhCCCcEEEE
Confidence 65 33 4455799998643 21111221 1122357778888888876654
No 347
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.41 E-value=0.042 Score=47.28 Aligned_cols=96 Identities=17% Similarity=0.274 Sum_probs=62.1
Q ss_pred cCCCCCC-eEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEE-cCCCC-CCCCCCCee
Q 042544 96 LGLKSGQ-KVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVK-ADFMK-MPFPDNSFD 170 (305)
Q Consensus 96 ~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~d~~~-~~~~~~~fD 170 (305)
+++.++. +||=+|+ |.|..+..+++..+++|++++.++..++.+++. |.. .++. .+... .....+.+|
T Consensus 141 ~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~~d 213 (324)
T 3nx4_A 141 AGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN---RILSRDEFAESRPLEKQLWA 213 (324)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS---EEEEGGGSSCCCSSCCCCEE
T ss_pred cccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEecCCHHHHHhhcCCCcc
Confidence 4455422 4998987 467788888876689999999999988888663 322 1111 11111 112235689
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|+-.- ... .+..+.++|+++|.+++.-
T Consensus 214 ~v~d~~-----g~~-------------~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 214 GAIDTV-----GDK-------------VLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EEEESS-----CHH-------------HHHHHHHTEEEEEEEEECC
T ss_pred EEEECC-----CcH-------------HHHHHHHHHhcCCEEEEEe
Confidence 887432 111 3788899999999988753
No 348
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.32 E-value=0.45 Score=40.35 Aligned_cols=71 Identities=18% Similarity=0.092 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHhhcCCe---EEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC----CCCeeE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQFSSTS---VTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP----DNSFDA 171 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~fD~ 171 (305)
....+++|+-||.|.++..+... +.+ |.++|+++...+.-+.+. +...++.+|+.++... .+.+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~------~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH------QGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT------TTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC------CCCceeCCChHHccHHHhcccCCcCE
Confidence 45679999999999999888764 443 589999999887666553 1346788999876421 135899
Q ss_pred EEecc
Q 042544 172 VYAIE 176 (305)
Q Consensus 172 v~~~~ 176 (305)
++...
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99754
No 349
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.25 E-value=0.013 Score=51.36 Aligned_cols=97 Identities=19% Similarity=0.209 Sum_probs=63.8
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CCCC
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FPDN 167 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~ 167 (305)
...+.++.+||-+|+ |.|..+..+++..+++|+++|.++..++.+++. |.. .++..+-.++. ....
T Consensus 162 ~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 162 MAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHSS
T ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHHhCC
Confidence 457789999999853 356777777766689999999999998887663 322 12221111100 0024
Q ss_pred CeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 168 SFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 168 ~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.+|+|+.+-.- . .+....+.|+++|.+++..
T Consensus 235 g~Dvvid~~g~-----~-------------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 235 GVDIILDMIGA-----A-------------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CEEEEEESCCG-----G-------------GHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCCH-----H-------------HHHHHHHHhccCCEEEEEE
Confidence 68998854321 1 3778889999999887743
No 350
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.97 E-value=0.28 Score=42.17 Aligned_cols=95 Identities=20% Similarity=0.328 Sum_probs=63.6
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
...+.++.+||-.|+ |.|..+..++...+++|+++|.++..++.+++. +.. ..+ |..+.. .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~i~~~~ 210 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTI--NYSTQDFAEVVREIT 210 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCHHHHHHHHHHh
Confidence 457788999999995 567777777755588999999999888777552 321 122 222111 1
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+|+|+.+-.- . .++.+.++|+++|.++...
T Consensus 211 ~~~~~d~vi~~~g~-------~-----------~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 211 GGKGVDVVYDSIGK-------D-----------TLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp TTCCEEEEEECSCT-------T-----------THHHHHHTEEEEEEEEECC
T ss_pred CCCCCeEEEECCcH-------H-----------HHHHHHHhhccCCEEEEEe
Confidence 12358988854321 1 4788899999999887653
No 351
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.95 E-value=0.14 Score=44.18 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcC---CeE-EEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC---CCCCeeEE
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSS---TSV-TGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF---PDNSFDAV 172 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~---~~v-~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~fD~v 172 (305)
...+++|+-||.|.++..+... + ..| .++|+++...+..+.+... . ++++|+.++.. +...+|++
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~-----~--~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE-----E--VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC-----C--CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC-----C--cccCChhhcCHHHhccCCCCEE
Confidence 3468999999999999998764 4 345 6999999998887776521 1 56778877642 22358999
Q ss_pred Eeccc
Q 042544 173 YAIEA 177 (305)
Q Consensus 173 ~~~~~ 177 (305)
+...-
T Consensus 81 ~ggpP 85 (327)
T 3qv2_A 81 FMSPP 85 (327)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 87543
No 352
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.87 E-value=0.23 Score=43.08 Aligned_cols=91 Identities=16% Similarity=0.189 Sum_probs=59.3
Q ss_pred CCCeEEEEc-CC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----CCCCCCeeEE
Q 042544 100 SGQKVLDVG-CG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----PFPDNSFDAV 172 (305)
Q Consensus 100 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v 172 (305)
++.+||=+| +| .|..+..+++..+++|++++.++..++.+++. |.. .++..+ .++ ......+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~-~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD---IVLNHK-ESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS---EEECTT-SCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEEECC-ccHHHHHHHhCCCCccEE
Confidence 789999884 44 56677777766689999999999988887763 322 122111 110 0122468988
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+.+-. .. . .+..+.++|+++|.++..
T Consensus 222 ~d~~g-----~~-~-----------~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 222 FCTFN-----TD-M-----------YYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EESSC-----HH-H-----------HHHHHHHHEEEEEEEEES
T ss_pred EECCC-----ch-H-----------HHHHHHHHhccCCEEEEE
Confidence 85321 11 1 368888999999998753
No 353
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.72 E-value=0.16 Score=44.48 Aligned_cols=86 Identities=21% Similarity=0.188 Sum_probs=56.3
Q ss_pred CCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCH---HHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC------CCCee
Q 042544 101 GQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNE---YQITRGKELNRFAGVDKTCNFVKADFMKMPFP------DNSFD 170 (305)
Q Consensus 101 ~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~------~~~fD 170 (305)
+.+||-+|+| .|..+..+++..+++|+++|.++ ..++.+++. |. +.+ | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga----~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KT----NYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TC----EEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CC----cee--c-hH-HHHHHHHHhCCCCC
Confidence 8999999984 25566666655588999999998 777766542 32 222 3 22 211 14589
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccH-HHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRST-RKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l-~~~~~~L~~gG~~~i~ 215 (305)
+|+..-.. .. .+ +.+.+.|+++|.+++.
T Consensus 249 ~vid~~g~-----~~------------~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 249 VIIDATGA-----DV------------NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEEECCCC-----CT------------HHHHHHGGGEEEEEEEEEC
T ss_pred EEEECCCC-----hH------------HHHHHHHHHHhcCCEEEEE
Confidence 98754321 11 35 7788899999988774
No 354
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.71 E-value=0.067 Score=46.06 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=60.9
Q ss_pred cCCCCCC-eEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCCCCCeeE
Q 042544 96 LGLKSGQ-KVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFPDNSFDA 171 (305)
Q Consensus 96 ~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~ 171 (305)
.++.++. +||-+|+ |.|..+..+++..+++|++++.++..++.+++ .|...-+.....+... .....+.+|+
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~d~ 219 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWAA 219 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEEE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhcCCcccE
Confidence 4677775 8999997 46777788886668899999999887777754 3332111111110000 0122346898
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
|+-.-. .. .+....+.|+++|.+++.
T Consensus 220 vid~~g-----~~-------------~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 220 AVDPVG-----GR-------------TLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EEECST-----TT-------------THHHHHHTEEEEEEEEEC
T ss_pred EEECCc-----HH-------------HHHHHHHhhccCCEEEEE
Confidence 874321 11 377888999999998774
No 355
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.70 E-value=0.011 Score=51.44 Aligned_cols=93 Identities=19% Similarity=0.263 Sum_probs=60.5
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-------C
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-------P 165 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------~ 165 (305)
..++ ++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++. . -.++ |..+..+ .
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-------~~v~--~~~~~~~~~~~~~~~ 228 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-------DRLV--NPLEEDLLEVVRRVT 228 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-------SEEE--CTTTSCHHHHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-------Hhcc--CcCccCHHHHHHHhc
Confidence 4567 899999999853 6677777765677 999999999887765442 1 1111 2211110 0
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
...+|+|+..-. ... .++...+.|+++|.+++.
T Consensus 229 ~~g~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 229 GSGVEVLLEFSG-----NEA------------AIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SSCEEEEEECSC-----CHH------------HHHHHHHHEEEEEEEEEC
T ss_pred CCCCCEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEE
Confidence 235898875322 111 478889999999987764
No 356
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.68 E-value=0.23 Score=43.47 Aligned_cols=96 Identities=14% Similarity=0.184 Sum_probs=63.5
Q ss_pred HcCCC-----CCCeEEEEc-CC-CChHHHHHHhh-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC----
Q 042544 95 QLGLK-----SGQKVLDVG-CG-IGGPLREIAQF-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM---- 162 (305)
Q Consensus 95 ~~~~~-----~~~~vLDiG-cG-~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~---- 162 (305)
...+. ++.+||=+| +| .|..+..+++. .+++|+++|.++..++.+++ .|.. .++... .++
T Consensus 161 ~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~-~~~~~~v 232 (363)
T 4dvj_A 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHS-KPLAAEV 232 (363)
T ss_dssp TSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTT-SCHHHHH
T ss_pred hhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCC-CCHHHHH
Confidence 44565 788999998 44 57788888865 58899999999998888765 3322 122111 110
Q ss_pred -CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 163 -PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 163 -~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
....+.+|+|+-.-. ... .+..+.++|+++|.+++.
T Consensus 233 ~~~~~~g~Dvvid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 233 AALGLGAPAFVFSTTH-----TDK------------HAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HTTCSCCEEEEEECSC-----HHH------------HHHHHHHHSCTTCEEEEC
T ss_pred HHhcCCCceEEEECCC-----chh------------hHHHHHHHhcCCCEEEEE
Confidence 122357898875321 111 478889999999998875
No 357
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.60 E-value=0.21 Score=43.21 Aligned_cols=67 Identities=16% Similarity=0.201 Sum_probs=49.6
Q ss_pred CeEEEEcCCCChHHHHHHhhcC---CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC---CCCCCeeEEEec
Q 042544 102 QKVLDVGCGIGGPLREIAQFSS---TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP---FPDNSFDAVYAI 175 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~ 175 (305)
.+++|+-||.|.++..+... + ..|.++|+++...+.-+.+.. ...++.+|+.++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 48999999999999998764 4 357799999999887776642 2456778887754 222358999864
No 358
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.50 E-value=0.31 Score=42.03 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=65.9
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--C--CCCC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--F--PDNS 168 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--~--~~~~ 168 (305)
....+.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++ .|.. .++..+-.++. . ..+.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEIGG 232 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHSS
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhCCC
Confidence 345778999999999975 888888887668999999999999887765 2322 22221111100 0 0135
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+|+.... ... .++.+.+.|+++|.+++.
T Consensus 233 ~d~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 233 AHGVLVTAV-----SPK------------AFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEEEEESSC-----CHH------------HHHHHHHHEEEEEEEEEC
T ss_pred CCEEEEeCC-----CHH------------HHHHHHHHhccCCEEEEe
Confidence 888874321 111 488899999999998874
No 359
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.49 E-value=0.31 Score=44.00 Aligned_cols=46 Identities=20% Similarity=0.271 Sum_probs=38.0
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHH
Q 042544 96 LGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKE 141 (305)
Q Consensus 96 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~ 141 (305)
..+.++.+||=+|+ |.|..+..+++..+++|++++.++..++.+++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh
Confidence 56789999999997 35677778886668999999999998888765
No 360
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.48 E-value=0.025 Score=48.21 Aligned_cols=90 Identities=16% Similarity=0.167 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC-CCC--CCCCCCeeEE
Q 042544 98 LKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF-MKM--PFPDNSFDAV 172 (305)
Q Consensus 98 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~-~~~--~~~~~~fD~v 172 (305)
+.++.+||-+|+ |.|..+..+++..+++|++++.++..++.+++ .|.. .++..+- .++ .. +.+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~--~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW--GGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT--TSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh--cCceEE
Confidence 788999999998 45777777776568899999999988877654 2322 1221110 110 01 468998
Q ss_pred EecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 173 YAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 173 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+. -. .. .+....++|+++|.++..
T Consensus 194 id-~g-----~~-------------~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 194 LE-VR-----GK-------------EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EE-CS-----CT-------------THHHHHTTEEEEEEEEEC
T ss_pred EE-CC-----HH-------------HHHHHHHhhccCCEEEEE
Confidence 75 21 11 478888999999988764
No 361
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.45 E-value=1.1 Score=40.11 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=35.3
Q ss_pred CCeEEEEcCCCChHHHHHHhhc------CCeEEEEcCCHHHHHHHHHHHHh
Q 042544 101 GQKVLDVGCGIGGPLREIAQFS------STSVTGLNNNEYQITRGKELNRF 145 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~------~~~v~gvD~s~~~l~~a~~~~~~ 145 (305)
..+|+|+|.|+|.++..+.+.. ..+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3699999999999988876421 24899999999888776666653
No 362
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.36 E-value=0.15 Score=44.68 Aligned_cols=97 Identities=19% Similarity=0.217 Sum_probs=60.1
Q ss_pred HcCCC-CCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcC-CCCC-CCCCCCee
Q 042544 95 QLGLK-SGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKAD-FMKM-PFPDNSFD 170 (305)
Q Consensus 95 ~~~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d-~~~~-~~~~~~fD 170 (305)
...+. ++.+||=+|+|. |..+..+++..+++|++++.++..++.+.+. .|.. .++..+ ...+ .. .+.+|
T Consensus 181 ~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~---lGa~---~v~~~~~~~~~~~~-~~~~D 253 (366)
T 1yqd_A 181 YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKN---FGAD---SFLVSRDQEQMQAA-AGTLD 253 (366)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHT---SCCS---EEEETTCHHHHHHT-TTCEE
T ss_pred hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCc---eEEeccCHHHHHHh-hCCCC
Confidence 35667 899999999763 5566667765688999999998877765532 2321 122111 0000 01 13689
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+..-.. .. .++...+.|+++|.++..
T Consensus 254 ~vid~~g~-----~~------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 254 GIIDTVSA-----VH------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EEEECCSS-----CC------------CSHHHHHHEEEEEEEEEC
T ss_pred EEEECCCc-----HH------------HHHHHHHHHhcCCEEEEE
Confidence 98754221 10 356778899999987764
No 363
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=92.14 E-value=0.17 Score=43.81 Aligned_cols=94 Identities=21% Similarity=0.230 Sum_probs=63.1
Q ss_pred HHcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------CC
Q 042544 94 LQLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------FP 165 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~ 165 (305)
....+.++.+||-+|+ |.|..+..+++..+++|+++ .++..++.+++. |.. .+. +-.++. ..
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga~----~i~-~~~~~~~~~~~~~~ 213 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GAT----PID-ASREPEDYAAEHTA 213 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TSE----EEE-TTSCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CCC----Eec-cCCCHHHHHHHHhc
Confidence 3467788999999994 35777778886668999999 888888777653 322 222 211110 11
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
...+|+|+-+-. .. .+....+.|+++|.+++.
T Consensus 214 ~~g~D~vid~~g-----~~-------------~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 214 GQGFDLVYDTLG-----GP-------------VLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TSCEEEEEESSC-----TH-------------HHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-----cH-------------HHHHHHHHHhcCCeEEEE
Confidence 246999875322 11 478888999999998874
No 364
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.77 E-value=0.33 Score=42.22 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=65.4
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcC---CCC----C-C
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKAD---FMK----M-P 163 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d---~~~----~-~ 163 (305)
...++.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+ ..+ + .
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHH
Confidence 456788999999999874 7778888865677 99999999998887765 2332 222211 000 0 0
Q ss_pred CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 ~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.....+|+|+-.-. ... .+....++|+++|.+++.-
T Consensus 238 ~~~~g~D~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 238 QLGCKPEVTIECTG-----AEA------------SIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHTSCCSEEEECSC-----CHH------------HHHHHHHHSCTTCEEEECS
T ss_pred HhCCCCCEEEECCC-----ChH------------HHHHHHHHhcCCCEEEEEe
Confidence 00145898874321 111 4778889999999988753
No 365
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.49 E-value=0.12 Score=45.02 Aligned_cols=97 Identities=25% Similarity=0.279 Sum_probs=60.4
Q ss_pred HcCCC-CCCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEc-CCCCC-CCCCCCee
Q 042544 95 QLGLK-SGQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKA-DFMKM-PFPDNSFD 170 (305)
Q Consensus 95 ~~~~~-~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-d~~~~-~~~~~~fD 170 (305)
...+. ++.+||=+|+| .|..+..+++..+++|+++|.++..++.+++ ..|.. .++.. +...+ .. .+.+|
T Consensus 174 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---~vi~~~~~~~~~~~-~~g~D 246 (357)
T 2cf5_A 174 HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD---DYVIGSDQAKMSEL-ADSLD 246 (357)
T ss_dssp HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS---CEEETTCHHHHHHS-TTTEE
T ss_pred hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc---eeeccccHHHHHHh-cCCCC
Confidence 35677 89999999986 3566667776568899999999887766652 23322 12211 10000 01 13589
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+-.-. ... .+....++|+++|.++..
T Consensus 247 ~vid~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 247 YVIDTVP-----VHH------------ALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEECCC-----SCC------------CSHHHHTTEEEEEEEEEC
T ss_pred EEEECCC-----ChH------------HHHHHHHHhccCCEEEEe
Confidence 8874321 110 366778899999998774
No 366
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.43 E-value=0.2 Score=43.42 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=60.4
Q ss_pred HHcCCCCCCeEEEEcCCCC-hHHHHHHh-hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-C-C-CCCCC
Q 042544 94 LQLGLKSGQKVLDVGCGIG-GPLREIAQ-FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-M-P-FPDNS 168 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~-~-~~~~~ 168 (305)
....+.++.+||=+|+|.+ ..+..+++ ..+.+|+++|.++..++.+++. |...-+.....|..+ + . .....
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~g~g 232 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITGGLG 232 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcCCCC
Confidence 3557789999999999864 34444554 3578999999999988777653 322111111111111 0 0 11234
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|.++.... ... .+....+.|+++|.+++.
T Consensus 233 ~d~~~~~~~-----~~~------------~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 233 VQSAIVCAV-----ARI------------AFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEEEECCS-----CHH------------HHHHHHHTEEEEEEEEEC
T ss_pred ceEEEEecc-----Ccc------------hhheeheeecCCceEEEE
Confidence 666553211 111 478888999999998774
No 367
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=90.84 E-value=0.085 Score=45.43 Aligned_cols=98 Identities=15% Similarity=0.159 Sum_probs=61.4
Q ss_pred cCCCCCC-eEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-CCCCCCeeE
Q 042544 96 LGLKSGQ-KVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-PFPDNSFDA 171 (305)
Q Consensus 96 ~~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~ 171 (305)
.++.++. +||-+|+ |.|..+..+++..+++|++++.++..++.+++. |...-+.....+.... ....+.+|+
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~~v~~~~~~~~~~~~~~~~~~~d~ 220 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GASEVISREDVYDGTLKALSKQQWQG 220 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCSEEEEHHHHCSSCCCSSCCCCEEE
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCcEEEECCCchHHHHHHhhcCCccE
Confidence 4667775 8999997 466777777765688999999998877777652 3221111101111111 122346898
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
|+..-. .. .+....+.|+++|.+++.
T Consensus 221 vid~~g-----~~-------------~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 221 AVDPVG-----GK-------------QLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp EEESCC-----TH-------------HHHHHHTTEEEEEEEEEC
T ss_pred EEECCc-----HH-------------HHHHHHHhhcCCCEEEEE
Confidence 875421 11 377788899999998774
No 368
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=90.60 E-value=0.55 Score=40.30 Aligned_cols=67 Identities=10% Similarity=0.077 Sum_probs=49.0
Q ss_pred CeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCC-CCCeeEEEecc
Q 042544 102 QKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFP-DNSFDAVYAIE 176 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~fD~v~~~~ 176 (305)
++|||+-||.|.++.-+.+. +. .|.++|+++...+.-+.+. + -.++.+|+.++... -..+|+++...
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEecC
Confidence 47999999999999888764 54 4569999998887766653 2 36788999876421 13579988643
No 369
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.11 E-value=1.2 Score=38.32 Aligned_cols=100 Identities=13% Similarity=0.040 Sum_probs=62.1
Q ss_pred HHHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC------C
Q 042544 93 ALQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP------F 164 (305)
Q Consensus 93 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~------~ 164 (305)
.....+.++.+||=.|+|. |..+..+++..++ .++++|.++..++.+++. |.. .++..+-.+.+ -
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~---~~i~~~~~~~~~~~~~~~ 225 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM---QTFNSSEMSAPQMQSVLR 225 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS---EEEETTTSCHHHHHHHHG
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe---EEEeCCCCCHHHHHHhhc
Confidence 3456778999999999874 4456666655454 568999999988887663 432 22222111100 0
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
....+|+|+..- ..+. .++...++|+++|.+++.-
T Consensus 226 ~~~g~d~v~d~~-----G~~~------------~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 226 ELRFNQLILETA-----GVPQ------------TVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp GGCSSEEEEECS-----CSHH------------HHHHHHHHCCTTCEEEECC
T ss_pred ccCCcccccccc-----cccc------------hhhhhhheecCCeEEEEEe
Confidence 123467776432 1111 4788889999999988743
No 370
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.06 E-value=0.32 Score=43.73 Aligned_cols=46 Identities=15% Similarity=0.168 Sum_probs=37.3
Q ss_pred cCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHH
Q 042544 96 LGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKE 141 (305)
Q Consensus 96 ~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~ 141 (305)
..+.++.+||=+|+ |.|..+..+++..+++|++++.++..++.+++
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 57789999999997 35667777776668999999999998887754
No 371
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.87 E-value=0.54 Score=40.18 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=60.2
Q ss_pred HHcCCCCCCeEEEEc-CC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCCCCCCee
Q 042544 94 LQLGLKSGQKVLDVG-CG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPFPDNSFD 170 (305)
Q Consensus 94 ~~~~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD 170 (305)
....+.++.+||=+| +| .|..+..+++..+++|++++ ++..++.+++ .|.. .++..+-.+ +.-.-..+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccCCC
Confidence 567888999999886 44 57788888866689999997 5555665554 3432 222211111 100114589
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+-.-. .. ......++|+++|.++..
T Consensus 218 ~v~d~~g-----~~-------------~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 218 AVIDLVG-----GD-------------VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEESSC-----HH-------------HHHHHGGGEEEEEEEEEC
T ss_pred EEEECCC-----cH-------------HHHHHHHhccCCCEEEEe
Confidence 8875321 11 256778899999988764
No 372
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.00 E-value=0.33 Score=46.35 Aligned_cols=77 Identities=13% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh--------cC-----CeEEEEcC---CHHHHHHHH-----------HHHHhcCC----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF--------SS-----TSVTGLNN---NEYQITRGK-----------ELNRFAGV---- 148 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~--------~~-----~~v~gvD~---s~~~l~~a~-----------~~~~~~~~---- 148 (305)
+.-+|||+|.|+|...+...+. |. .+++.+|. +...+..+- +.+.....
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999987776531 11 57899998 555555432 22222211
Q ss_pred ------C---CCeEEEEcCCCC-CC-CC---CCCeeEEEecc
Q 042544 149 ------D---KTCNFVKADFMK-MP-FP---DNSFDAVYAIE 176 (305)
Q Consensus 149 ------~---~~~~~~~~d~~~-~~-~~---~~~fD~v~~~~ 176 (305)
. -.+++..+|+.+ ++ +. +..+|+++.-.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~ 179 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG 179 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC
Confidence 1 145677888865 32 22 46799998743
No 373
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.86 E-value=0.61 Score=44.40 Aligned_cols=40 Identities=13% Similarity=0.083 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhh--------c---C--CeEEEEcC---CHHHHHHH
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF--------S---S--TSVTGLNN---NEYQITRG 139 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~--------~---~--~~v~gvD~---s~~~l~~a 139 (305)
+.-+|||+|.|||...+...+. | . .+++++|. +++.+..+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~ 121 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALA 121 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHH
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHH
Confidence 3458999999999977765421 1 1 46899998 77777643
No 374
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=88.60 E-value=2.1 Score=31.34 Aligned_cols=65 Identities=12% Similarity=0.099 Sum_probs=43.7
Q ss_pred CCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
..+|+=+||| .++..+++ ..+.+|+++|.++..++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 4578889985 46665553 237899999999988776654 13678888887521 1224578887
Q ss_pred ec
Q 042544 174 AI 175 (305)
Q Consensus 174 ~~ 175 (305)
..
T Consensus 76 ~~ 77 (141)
T 3llv_A 76 IT 77 (141)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 375
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=88.45 E-value=0.58 Score=40.93 Aligned_cols=97 Identities=15% Similarity=0.220 Sum_probs=63.3
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCC-----CCC
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKM-----PFP 165 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~~ 165 (305)
...+.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+- .++ ...
T Consensus 187 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~~ 259 (374)
T 1cdo_A 187 TAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKMT 259 (374)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHHh
Confidence 45778899999999864 6677777765677 89999999998887764 2332 1221110 010 011
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEE
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIW 215 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~ 215 (305)
.+.+|+|+-.-. ... .+..+.++|+++ |.+++.
T Consensus 260 ~~g~D~vid~~g-----~~~------------~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 260 NGGVDFSLECVG-----NVG------------VMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp TSCBSEEEECSC-----CHH------------HHHHHHHTBCTTTCEEEEC
T ss_pred CCCCCEEEECCC-----CHH------------HHHHHHHHhhcCCcEEEEE
Confidence 136898874321 111 478889999999 988774
No 376
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=88.38 E-value=0.55 Score=41.08 Aligned_cols=99 Identities=11% Similarity=0.127 Sum_probs=64.3
Q ss_pred HHcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCC-----CC
Q 042544 94 LQLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKM-----PF 164 (305)
Q Consensus 94 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~ 164 (305)
....+.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+- .++ ..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEK 257 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHH
Confidence 345778999999999874 6677777765577 89999999988887764 3332 2221110 010 01
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEe
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWE 216 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~ 216 (305)
..+.+|+|+-.-. ... .+..+.++|+++ |.+++.-
T Consensus 258 t~gg~Dvvid~~g-----~~~------------~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 258 TNGGVDYAVECAG-----RIE------------TMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp TTSCBSEEEECSC-----CHH------------HHHHHHHTBCTTTCEEEECC
T ss_pred hCCCCCEEEECCC-----CHH------------HHHHHHHHHhcCCCEEEEEc
Confidence 1236899874321 111 478888999999 9887643
No 377
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.26 E-value=0.8 Score=41.62 Aligned_cols=58 Identities=19% Similarity=0.227 Sum_probs=42.6
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM 162 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 162 (305)
..+++|+-||.|.++..+... +. .|.++|+++...+.-+.+.. ..+...++.+|+.++
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i 146 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDI 146 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhh
Confidence 468999999999999998764 44 47899999988876665531 112356777888754
No 378
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.05 E-value=1.6 Score=33.00 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCCChHHHHHHh-hcCCeEEEEcC
Q 042544 88 HEHFLALQLGLKSGQKVLDVGCGIGGPLREIAQ-FSSTSVTGLNN 131 (305)
Q Consensus 88 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~~v~gvD~ 131 (305)
..++......--+| -|||+|-|+|..--++.+ .|+.+|+++|-
T Consensus 29 ~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 29 CLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 34444444443344 699999999999999995 57899999996
No 379
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=87.84 E-value=7.2 Score=33.50 Aligned_cols=107 Identities=9% Similarity=0.089 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhh--cCCeEEEEcCCHHHHHHHHHHHHhcC----------------------CCCCeEEE
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF--SSTSVTGLNNNEYQITRGKELNRFAG----------------------VDKTCNFV 155 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~----------------------~~~~~~~~ 155 (305)
+...|+-+|||.=.....+... ++.+++=||. |..++.=++.+...+ ...+.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4568999999987777776642 3567888887 555554333333210 13567899
Q ss_pred EcCCCCC----------CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 156 KADFMKM----------PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 156 ~~d~~~~----------~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
..|+.+. .+..+..-++++-.++.+++...... +++.+.+.. |+|.+++.+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~---------ll~~ia~~f-~~~~~i~yE~ 230 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSAN---------LLKWAANSF-ERAMFINYEQ 230 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHH---------HHHHHHHHC-SSEEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHH---------HHHHHHHhC-CCceEEEEec
Confidence 9999762 13445566888888999998876543 455555554 5565555553
No 380
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=87.72 E-value=0.69 Score=40.48 Aligned_cols=98 Identities=10% Similarity=0.136 Sum_probs=63.5
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCC-----CCC
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKM-----PFP 165 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~-----~~~ 165 (305)
...+.++.+||-+|+|. |..+..+++..++ +|+++|.++..++.+++ .|.. .++..+- .++ ...
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~~ 262 (376)
T 1e3i_A 190 TAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITELT 262 (376)
T ss_dssp TSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHHh
Confidence 45778899999999873 6677777765677 89999999988887764 2332 1221110 010 001
Q ss_pred CCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhC-CceEEEe
Q 042544 166 DNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQA-GFEVIWE 216 (305)
Q Consensus 166 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~~~i~~ 216 (305)
.+.+|+|+-.-. ... .+..+.+.|+++ |.+++.-
T Consensus 263 ~~g~Dvvid~~G-----~~~------------~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 263 AGGVDYSLDCAG-----TAQ------------TLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp TSCBSEEEESSC-----CHH------------HHHHHHHTBCTTTCEEEECC
T ss_pred CCCccEEEECCC-----CHH------------HHHHHHHHhhcCCCEEEEEC
Confidence 136898874321 111 478889999999 9887743
No 381
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=87.36 E-value=0.39 Score=41.81 Aligned_cols=96 Identities=16% Similarity=0.156 Sum_probs=55.1
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEc-CCHH---HHHHHHHHHHhcCCCCCeEEEEc------CCCCC
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLN-NNEY---QITRGKELNRFAGVDKTCNFVKA------DFMKM 162 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD-~s~~---~l~~a~~~~~~~~~~~~~~~~~~------d~~~~ 162 (305)
...+.++.+||=+|+ |.|..+..+++..+++++++. .++. .++.++ ..|.. .++.. ++.+.
T Consensus 162 ~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~---~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 162 FEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAE---HVITEEELRRPEMKNF 234 (357)
T ss_dssp SSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCS---EEEEHHHHHSGGGGGT
T ss_pred HhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCc---EEEecCcchHHHHHHH
Confidence 357889999999997 467788888866688776654 4332 233333 33432 22221 12121
Q ss_pred CCCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 163 PFPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 163 ~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
.-..+.+|+|+-.- ... ...+..++|+++|.+++.
T Consensus 235 ~~~~~~~Dvvid~~-----g~~-------------~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 235 FKDMPQPRLALNCV-----GGK-------------SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp TSSSCCCSEEEESS-----CHH-------------HHHHHHTTSCTTCEEEEC
T ss_pred HhCCCCceEEEECC-----CcH-------------HHHHHHHhhCCCCEEEEE
Confidence 11111488887432 111 234577889999988774
No 382
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.21 E-value=0.75 Score=39.97 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=62.5
Q ss_pred HcCCCCCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCC-CC--CCCCCCee
Q 042544 95 QLGLKSGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFM-KM--PFPDNSFD 170 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~-~~--~~~~~~fD 170 (305)
..++.++.+||-+|+|. |..+..+++..+++|+++|.++..++.+++. |.. .++..+-. ++ ... +.+|
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 174 RNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp HTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSC-SCEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhh-cCCC
Confidence 36788999999999863 6677777765688999999999888877652 322 22221111 10 011 4699
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
+|+..-.-. + .. .+..+.++|+++|.++..
T Consensus 246 ~vid~~g~~--~-~~------------~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSL--T-DI------------DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCS--T-TC------------CTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCC--c-HH------------HHHHHHHHhcCCCEEEEe
Confidence 998543210 0 10 345566788999988764
No 383
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.68 E-value=8.8 Score=31.48 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=47.9
Q ss_pred CeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 102 QKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
++||=.|| |..+..+++. .+.+|++++.++........ .+++++.+|+.++. -..+|+|+.....
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCCc
Confidence 68999994 8888877742 37899999998865543322 35899999998865 4568998876554
Q ss_pred c
Q 042544 179 C 179 (305)
Q Consensus 179 ~ 179 (305)
.
T Consensus 74 ~ 74 (286)
T 3ius_A 74 D 74 (286)
T ss_dssp B
T ss_pred c
Confidence 3
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=86.40 E-value=2.5 Score=31.01 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=43.2
Q ss_pred CCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
..+|+=+||| .++..+++ ..+.+|+++|.++..++.+++ ..+.++.+|..+.. ..-..+|+|+
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEE
Confidence 3578888886 45554442 247899999999998876654 13678889986521 1124578877
Q ss_pred ec
Q 042544 174 AI 175 (305)
Q Consensus 174 ~~ 175 (305)
+.
T Consensus 77 ~~ 78 (140)
T 3fwz_A 77 LT 78 (140)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 385
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.74 E-value=4.1 Score=33.55 Aligned_cols=75 Identities=21% Similarity=0.138 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
+++++|=-|++.|. .+..|++. +++|+.+|.+++.++.+.+.+...+ .++.++++|+.+.. + .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57788888877664 34444444 8999999999999988888777665 35889999998631 0 01
Q ss_pred CCeeEEEeccc
Q 042544 167 NSFDAVYAIEA 177 (305)
Q Consensus 167 ~~fD~v~~~~~ 177 (305)
+..|+++.+-.
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57898887654
No 386
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=85.73 E-value=1.7 Score=37.38 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=62.2
Q ss_pred HcCCCCCCeEEEEcCC--CChHHHHHHhhc-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-------C
Q 042544 95 QLGLKSGQKVLDVGCG--IGGPLREIAQFS-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-------F 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGcG--~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~ 164 (305)
...+.++.+||-+|+| .|..+..++... +++|+++|.++..++.+++. +.. .++ |..+.. .
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD---YVI--NASMQDPLAEIRRI 235 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC---EEe--cCCCccHHHHHHHH
Confidence 4677899999999997 455666666555 88999999999988877542 321 122 221111 1
Q ss_pred CC-CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 165 PD-NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 165 ~~-~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
.. +.+|+|+..-. ... .++...+.|+++|.+++.
T Consensus 236 ~~~~~~d~vi~~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNN-----SEK------------TLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCC-----CHH------------HHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEE
Confidence 11 46899875432 111 366677889999988774
No 387
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.55 E-value=4.3 Score=33.40 Aligned_cols=77 Identities=13% Similarity=0.008 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----------CCC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----------FPD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----------~~~ 166 (305)
+|+++|=-|++.|. .+..|++. +++|+.+|.+++.++.+.+.+...+ .++.++++|+.+.. -.-
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~-Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA-GARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT-TCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 57788877766553 33334443 8999999999999888877776655 35888889987621 012
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-.+.
T Consensus 85 G~iDiLVNNAG~~ 97 (255)
T 4g81_D 85 IHVDILINNAGIQ 97 (255)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 5789988765443
No 388
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.46 E-value=0.36 Score=42.28 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCC--CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-----CCCCCCeeE
Q 042544 99 KSGQKVLDVGCG--IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-----PFPDNSFDA 171 (305)
Q Consensus 99 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~ 171 (305)
.++.+||=+|++ .|..+..+++..+++|+++. ++..++.+++ .|.. .++...-.++ ....+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCccE
Confidence 788999999983 68888888876689999985 8877776654 3432 2222211111 011245898
Q ss_pred EEecccccccCChhhhhhcCCCCCcccHHHHHHHH-HhCCceEEE
Q 042544 172 VYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEAL-KQAGFEVIW 215 (305)
Q Consensus 172 v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L-~~gG~~~i~ 215 (305)
|+-.- .... .+..+.+.| +++|.++..
T Consensus 235 v~d~~-----g~~~------------~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCI-----TNVE------------STTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESS-----CSHH------------HHHHHHHHSCTTCEEEEES
T ss_pred EEECC-----CchH------------HHHHHHHHhhcCCCEEEEE
Confidence 87432 1211 477788888 699988764
No 389
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.83 E-value=1.7 Score=37.40 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=64.0
Q ss_pred CCCCCCeEEEEcCCC-ChHHHHHHhhc-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-CCCC
Q 042544 97 GLKSGQKVLDVGCGI-GGPLREIAQFS-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-PDNS 168 (305)
Q Consensus 97 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~ 168 (305)
.+.++.+||-+|+|. |..+..+++.. +.+|+++|.++..++.+++ .|.. .++..+- ++. . ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCC-cHHHHHHHHhCCCC
Confidence 578899999999874 77777888654 7899999999999888765 3432 2222111 110 0 1126
Q ss_pred eeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 169 FDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 169 fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|+|+-.- .... .+..+.+.|+++|.+++.-
T Consensus 240 ~d~v~d~~-----G~~~------------~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFV-----GAQS------------TIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESS-----CCHH------------HHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECC-----CCHH------------HHHHHHHHHhcCCEEEEEC
Confidence 89887432 1211 4888999999999988753
No 390
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.54 E-value=1.2 Score=38.38 Aligned_cols=95 Identities=21% Similarity=0.280 Sum_probs=62.1
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-CCC-------
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-MPF------- 164 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-~~~------- 164 (305)
...+.++.+||-+|+ |.|..+..++...+++|+++|.++..++.+++ .+.. .++ |..+ -.+
T Consensus 164 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 164 SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAVLKA 234 (347)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHHHHH
Confidence 346788999999998 46667777775558899999999888776654 2321 122 3321 010
Q ss_pred CCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 165 PDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
.++.+|+|+..-. ... .++.+.+.|+++|.+++.
T Consensus 235 ~~~~~D~vi~~~g-----~~~------------~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 235 TDGGAHGVINVSV-----SEA------------AIEASTRYVRANGTTVLV 268 (347)
T ss_dssp HTSCEEEEEECSS-----CHH------------HHHHHTTSEEEEEEEEEC
T ss_pred hCCCCCEEEECCC-----cHH------------HHHHHHHHHhcCCEEEEE
Confidence 1126898875432 111 477888899999988764
No 391
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.43 E-value=1.8 Score=33.38 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=41.5
Q ss_pred CCeEEEEcCCCChHHHHHHh---hc-CCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC----CC-CCCCeeE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FS-STSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM----PF-PDNSFDA 171 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~----~~-~~~~fD~ 171 (305)
+.+|+=+||| ..+..+++ .. +.+|+++|.++..++.+++ . .+.++.+|..+. .. .-..+|+
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~----g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----E----GRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----T----TCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----C----CCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 5688888875 45555442 34 7899999999988766543 1 245677776541 11 1245788
Q ss_pred EEec
Q 042544 172 VYAI 175 (305)
Q Consensus 172 v~~~ 175 (305)
|+..
T Consensus 109 vi~~ 112 (183)
T 3c85_A 109 VLLA 112 (183)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8763
No 392
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=83.82 E-value=12 Score=30.49 Aligned_cols=74 Identities=19% Similarity=0.197 Sum_probs=47.0
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CCCCCeeE
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FPDNSFDA 171 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~ 171 (305)
.|+++|=-|.+.|. .+..|++. +++|+..|.+.. +.+.+.+...+ .++.+++.|+.+.. +..+..|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~-Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAA-GAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHc-CCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 57788877776664 33444444 899999998753 22333344444 35888999987632 34567899
Q ss_pred EEecccc
Q 042544 172 VYAIEAT 178 (305)
Q Consensus 172 v~~~~~l 178 (305)
++.+-.+
T Consensus 83 LVNNAGi 89 (247)
T 4hp8_A 83 LVNNAGI 89 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8876543
No 393
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.67 E-value=0.61 Score=40.70 Aligned_cols=98 Identities=12% Similarity=0.045 Sum_probs=53.5
Q ss_pred CCeEEEEcCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEeccccc
Q 042544 101 GQKVLDVGCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEATC 179 (305)
Q Consensus 101 ~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 179 (305)
+.+||=+|+| .|..+..++...+++|+++|.++..++.+.+.... .+.....+..++.-.-..+|+|+..-...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 4799999985 23333344444578999999999888777654321 12222211111100002479988654332
Q ss_pred ccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEE
Q 042544 180 HAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVI 214 (305)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i 214 (305)
..+.+.. ..++..+.|++||.++.
T Consensus 242 ~~~~~~l-----------i~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 242 GRRAPIL-----------VPASLVEQMRTGSVIVD 265 (361)
T ss_dssp TSSCCCC-----------BCHHHHTTSCTTCEEEE
T ss_pred CCCCCee-----------cCHHHHhhCCCCCEEEE
Confidence 2111111 24556677899986654
No 394
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=83.60 E-value=1.9 Score=37.71 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=64.2
Q ss_pred HcC-CCCCCeEEEEcCC-CChHHHHHHhhcC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcC------CCC-C-C
Q 042544 95 QLG-LKSGQKVLDVGCG-IGGPLREIAQFSS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKAD------FMK-M-P 163 (305)
Q Consensus 95 ~~~-~~~~~~vLDiGcG-~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d------~~~-~-~ 163 (305)
.++ +.++.+||-+|+| .|..+..+++..+ .+|+++|.++..++.+++ .|.. .++..+ +.+ + .
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~ 261 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMD 261 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHH
Confidence 456 7889999999976 4667777776567 599999999998887764 3332 222221 000 0 0
Q ss_pred -CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 164 -FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 164 -~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.....+|+|+-.-. ... .+....++|+++|.+++.-
T Consensus 262 ~~~g~g~Dvvid~~g-----~~~------------~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 262 ITHGRGADFILEATG-----DSR------------ALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HTTTSCEEEEEECSS-----CTT------------HHHHHHHHEEEEEEEEECC
T ss_pred HhCCCCCcEEEECCC-----CHH------------HHHHHHHHHhcCCEEEEEe
Confidence 11236999985421 111 4788899999999887753
No 395
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.48 E-value=5 Score=34.05 Aligned_cols=79 Identities=10% Similarity=-0.003 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.+.+||=.|++.| .+..+++ ..+.+|++++.++..++.+.+.+...+...++.++..|+.+.. + .-
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 4678998887755 4444432 1378999999999988877776665544346889999997631 0 01
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-.+.
T Consensus 86 g~id~lv~nAg~~ 98 (319)
T 3ioy_A 86 GPVSILCNNAGVN 98 (319)
T ss_dssp CCEEEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4689988766543
No 396
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=83.16 E-value=2.5 Score=36.59 Aligned_cols=46 Identities=22% Similarity=0.290 Sum_probs=36.9
Q ss_pred cCCCCCCeEEEEcCC-CChHHHHHHhhc-CCeEEEEcCCHHHHHHHHH
Q 042544 96 LGLKSGQKVLDVGCG-IGGPLREIAQFS-STSVTGLNNNEYQITRGKE 141 (305)
Q Consensus 96 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~ 141 (305)
..+.++.+||=+|+| .|..+..+++.. +++|+++|.++..++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 678899999999985 345666667656 8899999999998887764
No 397
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.98 E-value=5.8 Score=35.20 Aligned_cols=65 Identities=14% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
..+|+=+||| .++..+++ ..+..|+++|.++..++.+++ . .+.++.+|+.+.. ..-...|+|+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~----g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F----GMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T----TCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C----CCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 4578878875 45555542 247899999999999887764 1 3568899987631 2224578877
Q ss_pred ec
Q 042544 174 AI 175 (305)
Q Consensus 174 ~~ 175 (305)
+.
T Consensus 74 v~ 75 (413)
T 3l9w_A 74 NA 75 (413)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 398
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.89 E-value=1.6 Score=38.69 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHH
Q 042544 100 SGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKE 141 (305)
Q Consensus 100 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~ 141 (305)
++.+|+=+|+|. |..+..++...+++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 467999999983 444445555568999999999988777655
No 399
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=82.70 E-value=0.45 Score=40.30 Aligned_cols=67 Identities=19% Similarity=0.136 Sum_probs=39.4
Q ss_pred CeEEEEcCCCC-CC-CCCCCeeEEEecccccccCC----hhh---h-hhcCCCC-CcccHHHHHHHHHhCCceEEEec
Q 042544 151 TCNFVKADFMK-MP-FPDNSFDAVYAIEATCHAPD----AAE---I-EIGDGLP-DIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 151 ~~~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~~----~~~---~-~~~~~~~-~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
++.++++|..+ ++ +++++||+|++.--.....+ ... . .....+. ....+.++.++|+|||.+++...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 57899999876 32 56789999998654322111 000 0 0000000 01247788999999999988653
No 400
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=82.44 E-value=0.31 Score=42.52 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=29.8
Q ss_pred cCCCCC-CeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHH
Q 042544 96 LGLKSG-QKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEY 134 (305)
Q Consensus 96 ~~~~~~-~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~ 134 (305)
..+.++ .+||=+|+ |.|..+..+++..+++++++..++.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRP 203 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCT
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCcc
Confidence 467888 99999987 3667778888666889988875544
No 401
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=81.88 E-value=0.63 Score=40.89 Aligned_cols=101 Identities=15% Similarity=0.007 Sum_probs=53.3
Q ss_pred CCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecccc
Q 042544 100 SGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIEAT 178 (305)
Q Consensus 100 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 178 (305)
++.+|+=+|+|. |..+...+...+++|+++|.++..++.+.+.. +. .+.....+..++.-.-...|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999852 22333333335789999999998877665532 21 1222111111110001247888764221
Q ss_pred cccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 179 CHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
.....+.. +.++..+.|+|||.++...
T Consensus 242 p~~~t~~l-----------i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 242 PGAKAPKL-----------VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp TTSCCCCC-----------BCHHHHTTSCTTCEEEEGG
T ss_pred CCCCCcce-----------ecHHHHhcCCCCcEEEEEe
Confidence 11111111 2456677789998766543
No 402
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=80.45 E-value=0.6 Score=40.99 Aligned_cols=42 Identities=17% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCC-ChHHHHHHhhcCCeEEEEcCCHHHHHHHHH
Q 042544 100 SGQKVLDVGCGI-GGPLREIAQFSSTSVTGLNNNEYQITRGKE 141 (305)
Q Consensus 100 ~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~ 141 (305)
++.+|+=+|+|. |..+..++...+++|+++|.++..++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 567999999983 444444554458999999999988776654
No 403
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.83 E-value=12 Score=30.58 Aligned_cols=74 Identities=14% Similarity=0.045 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.++++|=.|++.|. .+..|++. +++|+.++.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789988877663 33334443 8999999999988887777666543 46889999998632 0 01
Q ss_pred CCeeEEEecc
Q 042544 167 NSFDAVYAIE 176 (305)
Q Consensus 167 ~~fD~v~~~~ 176 (305)
+..|+++.+-
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 4689888765
No 404
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=79.73 E-value=6.7 Score=34.23 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCC-CeEEEEcCCCCCCCCCCCeeEEEe
Q 042544 100 SGQKVLDVGCGIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDK-TCNFVKADFMKMPFPDNSFDAVYA 174 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~ 174 (305)
.+.+||.++.+-|.++..++.. .++.+.-|-......+.+++..++.. .+++... .... .+.||+|+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~---~~~~~~v~~ 106 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TADY---PQQPGVVLI 106 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSCC---CSSCSEEEE
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-cccc---ccCCCEEEE
Confidence 5568999999999999998753 34555446666666677888777753 3555432 2222 356898875
No 405
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=79.32 E-value=8.8 Score=31.54 Aligned_cols=78 Identities=18% Similarity=0.135 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |..+..+++. .+.+|++++.++..++...+.+...+...++.++.+|+.+.. +. .
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45678877754 5555555531 378999999998877766666655554456788899987631 00 0
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+|+.+...
T Consensus 110 g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 110 SGVDICINNAGL 121 (279)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 358988876543
No 406
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=79.21 E-value=9.8 Score=30.81 Aligned_cols=78 Identities=9% Similarity=0.000 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCC-CCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVD-KTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++.|. .+..|++. +++|+.++.++..++...+.+...... .++.++.+|+.+.. +.
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 46788877776553 33334443 789999999998888777666544222 46889999998632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-.+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1468988876544
No 407
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=78.95 E-value=9.9 Score=31.05 Aligned_cols=77 Identities=8% Similarity=-0.104 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREI----AQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++.| ....+ ++. +++|+.+|.++..++.+.+.+.......++.++.+|+.+.. +.
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEA-GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678888887655 44443 343 88999999999888777666654222235889999997632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1467988876544
No 408
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.70 E-value=11 Score=30.75 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=52.3
Q ss_pred CCCeEEEEcC-CCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGC-GIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGc-G~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.+++||=.|+ |.|. .+..|++. +.+|+.++.++..++...+.+...+ ..++.++.+|+.+.. +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888887 5553 33344444 8999999999988887777665443 246899999998632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-.+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 1367988876554
No 409
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=78.35 E-value=8.9 Score=31.65 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCChHHHHHH----hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIA----QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++.| ....++ +. +++|+.++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 23 ~~k~~lVTGas~G-IG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 23 RPQTAFVTGVSSG-IGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER 98 (279)
T ss_dssp --CEEEEESTTSH-HHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678887886654 444443 33 8999999999988877766665543 46889999997632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 99 ~g~id~lv~nAg~ 111 (279)
T 3sju_A 99 FGPIGILVNSAGR 111 (279)
T ss_dssp HCSCCEEEECCCC
T ss_pred cCCCcEEEECCCC
Confidence 1368988876543
No 410
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.17 E-value=10 Score=31.72 Aligned_cols=77 Identities=13% Similarity=0.054 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++.| .+..+++ ..+.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. +. .
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 5678998887654 4444442 137899999999998887777666543 36889999998632 00 1
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-.+.
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3689888765443
No 411
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=77.86 E-value=1.1 Score=38.37 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=39.0
Q ss_pred CCeEEEEcCCCC-CC-CCCCCeeEEEecccccccC-----Ch---hhhhhcCCCCCcccHHHHHHHHHhCCceEEEec
Q 042544 150 KTCNFVKADFMK-MP-FPDNSFDAVYAIEATCHAP-----DA---AEIEIGDGLPDIRSTRKCLEALKQAGFEVIWEK 217 (305)
Q Consensus 150 ~~~~~~~~d~~~-~~-~~~~~fD~v~~~~~l~~~~-----~~---~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~~ 217 (305)
....++++|..+ +. +++++||+|++.--..... +. +... .....+.++.++|+|||.+++...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~-----~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVD-----WFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHH-----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHH-----HHHHHHHHHHHHCcCCcEEEEEEC
Confidence 357888999865 33 5678999999864332111 00 0000 001257888999999999888654
No 412
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=77.37 E-value=0.93 Score=39.67 Aligned_cols=98 Identities=17% Similarity=0.034 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHH---hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCCCeeEEEecc
Q 042544 100 SGQKVLDVGCGIGGPLREIA---QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPFPDNSFDAVYAIE 176 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~---~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 176 (305)
++.+|+=+|+| ..+..++ ...+++|+++|.++..++.+.+.. +. .+.....+...+.-.-..+|+|+..-
T Consensus 165 ~~~~V~ViGaG--~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGG--TVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECC
Confidence 35799999985 4444433 335789999999998777665422 21 12221111111100012478887643
Q ss_pred cccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 177 ATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 177 ~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
.......+.. ..+++.+.|++||.++..
T Consensus 238 g~~~~~~~~l-----------i~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 238 LVPGAKAPKL-----------VTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp C-------CC-----------SCHHHHTTSCTTCEEEEC
T ss_pred CCCccccchh-----------HHHHHHHhhcCCCEEEEE
Confidence 3221011110 245667778898876653
No 413
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.31 E-value=16 Score=26.01 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=40.6
Q ss_pred CCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
+++|+=+|+ |..+..++. ..+.+|+++|.++..++...+. . .+.++.+|..+.. ..-..+|+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 468888887 555555552 2378999999998876654431 1 2456777765311 1124578887
Q ss_pred ec
Q 042544 174 AI 175 (305)
Q Consensus 174 ~~ 175 (305)
..
T Consensus 75 ~~ 76 (140)
T 1lss_A 75 AV 76 (140)
T ss_dssp EC
T ss_pred Ee
Confidence 65
No 414
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=76.71 E-value=5.4 Score=39.64 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=34.3
Q ss_pred CCeEEEEcCCCChHHHHHHhhcCC--eEEEEcCCHHHHHHHHHHH
Q 042544 101 GQKVLDVGCGIGGPLREIAQFSST--SVTGLNNNEYQITRGKELN 143 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvD~s~~~l~~a~~~~ 143 (305)
..+++|+-||.|.++.-+... +. .+.++|+++...+.-+.+.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~ 583 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNN 583 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHC
T ss_pred CCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhC
Confidence 458999999999999998764 54 5779999999987766653
No 415
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=76.69 E-value=9.9 Score=31.33 Aligned_cols=76 Identities=14% Similarity=0.044 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC---------CCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF---------PDN 167 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~ 167 (305)
.++++|=.|++ |.....+++ ..+++|+.+|.++..++.+.+.+...+ .++.++.+|+.+..- ..+
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~g 108 (275)
T 4imr_A 32 RGRTALVTGSS-RGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAIA 108 (275)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 46788867765 444444442 137899999999877776666665543 468899999976420 014
Q ss_pred CeeEEEecccc
Q 042544 168 SFDAVYAIEAT 178 (305)
Q Consensus 168 ~fD~v~~~~~l 178 (305)
..|+++.+...
T Consensus 109 ~iD~lvnnAg~ 119 (275)
T 4imr_A 109 PVDILVINASA 119 (275)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988876543
No 416
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=76.59 E-value=12 Score=31.65 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=48.1
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCC------------HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNN------------EYQITRGKELNRFAGVDKTCNFVKADFMKMP- 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~- 163 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.+ +..++...+.+...+ .++.++.+|+.+..
T Consensus 45 ~gk~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 45 QGKVAFITGAARG-QGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG--RRIIARQADVRDLAS 121 (317)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence 4678887776654 4444442 138999999986 666665555554443 46889999997632
Q ss_pred ----CC-----CCCeeEEEecccc
Q 042544 164 ----FP-----DNSFDAVYAIEAT 178 (305)
Q Consensus 164 ----~~-----~~~fD~v~~~~~l 178 (305)
+. -+..|+++.+-.+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 00 1368988876543
No 417
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=76.51 E-value=11 Score=30.39 Aligned_cols=76 Identities=16% Similarity=0.001 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++. .....+++. .+.+|+.+|.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467888778654 444444421 37899999999988887777665543 46889999998632 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368988876543
No 418
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=76.33 E-value=9.3 Score=31.25 Aligned_cols=78 Identities=18% Similarity=0.063 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-CCCCee
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-PDNSFD 170 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~fD 170 (305)
.++++|=.|++ |.....+++ ..+++|+.+|.++..++...+.+...+....+.++..|+.+.. + .-+..|
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46788877765 444444442 1379999999999888776666655443346788888987521 0 114689
Q ss_pred EEEecccc
Q 042544 171 AVYAIEAT 178 (305)
Q Consensus 171 ~v~~~~~l 178 (305)
+++.+-..
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 88876543
No 419
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.96 E-value=14 Score=30.16 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |.....+++. .+.+|+.++.++..++...+.+.......++.++.+|+.+.. +. -
T Consensus 12 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGG-SGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788877765 4445444421 378999999998877766555443311235888999987631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+++.+-.+
T Consensus 91 g~id~lv~nAg~ 102 (267)
T 1iy8_A 91 GRIDGFFNNAGI 102 (267)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 357988876543
No 420
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=75.94 E-value=15 Score=29.92 Aligned_cols=76 Identities=13% Similarity=0.110 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHh-cCCCCCeEEEEcCCCCCCC-----C-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRF-AGVDKTCNFVKADFMKMPF-----P----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~d~~~~~~-----~----- 165 (305)
.+++||=.|++. .....+++ ..+++|+.++.++..++.+.+.+.. .+ .++.++.+|+.+..- .
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 467888666654 44444442 1378999999999888776665543 22 368999999987431 0
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 96 ~g~id~lv~nAg~ 108 (266)
T 4egf_A 96 FGGLDVLVNNAGI 108 (266)
T ss_dssp HTSCSEEEEECCC
T ss_pred cCCCCEEEECCCc
Confidence 0368988876543
No 421
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.92 E-value=12 Score=30.32 Aligned_cols=75 Identities=13% Similarity=0.028 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIA----QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++.| ....++ +. +++|+.+|.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 11 ~~k~vlVTGas~g-IG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 11 NDAVAIVTGAAAG-IGRAIAGTFAKA-GASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TTCEEEECSCSSH-HHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678887776654 444444 33 8999999999988877776666543 46889999997632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 87 ~g~id~lv~nAg~ 99 (256)
T 3gaf_A 87 FGKITVLVNNAGG 99 (256)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1368988876543
No 422
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=75.52 E-value=7.1 Score=31.72 Aligned_cols=75 Identities=15% Similarity=-0.030 Sum_probs=51.6
Q ss_pred CCCeEEEEcCCCChHHHHHH----hhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC----C
Q 042544 100 SGQKVLDVGCGIGGPLREIA----QFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----~ 166 (305)
.++++|=.|++.| .+..++ +. +.+|+.+|.++..++.+.+.+...+ .++.++.+|+.+.. +. .
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 4678887777655 444443 43 7899999999988877777666543 46889999997632 00 0
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 468988876544
No 423
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=75.15 E-value=13 Score=30.59 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCC-CCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGV-DKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~-----~~----- 165 (305)
.+++||=.|++.| ....+++ ..+++|+.+|.++..++.+.+.+...+. ..++.++.+|+.+.. +.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678887776544 4444442 1378999999999888877776665432 126889999997632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1367988876543
No 424
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=74.48 E-value=5.1 Score=34.52 Aligned_cols=96 Identities=11% Similarity=0.179 Sum_probs=62.6
Q ss_pred HHcCCCCC--CeEEEEcC--CCChHHHHHHhhcCC-eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----
Q 042544 94 LQLGLKSG--QKVLDVGC--GIGGPLREIAQFSST-SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----- 163 (305)
Q Consensus 94 ~~~~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----- 163 (305)
....+.++ .+||-.|+ |.|..+..++...++ +|+++|.++..++.+++. .|.. .++ |..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~~~ 223 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAI--NYKKDNVAEQL 223 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEE--ETTTSCHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCchHHHHHH
Confidence 45678889 99999998 455666666655578 999999998877766542 2321 112 222111
Q ss_pred --CCCCCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 164 --FPDNSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 164 --~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
...+.+|+|+.+-. . . .+..+.++|+++|.+++.
T Consensus 224 ~~~~~~~~d~vi~~~G-----~--~-----------~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 224 RESCPAGVDVYFDNVG-----G--N-----------ISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHCTTCEEEEEESCC-----H--H-----------HHHHHHHTEEEEEEEEEC
T ss_pred HHhcCCCCCEEEECCC-----H--H-----------HHHHHHHHhccCcEEEEE
Confidence 01126898875432 1 1 478888999999988775
No 425
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=74.44 E-value=12 Score=31.00 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC-C----C------C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKM-P----F------P 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~-~----~------~ 165 (305)
.+.+||=.|++. ..+..+++ ..+.+|+.++.++..++.+.+.+...+ ..++.++.+|+.+. . + .
T Consensus 11 ~~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 467888777654 44444442 137899999999988877766665543 24689999999874 1 0 0
Q ss_pred CCCeeEEEeccccc
Q 042544 166 DNSFDAVYAIEATC 179 (305)
Q Consensus 166 ~~~fD~v~~~~~l~ 179 (305)
.+..|+++.+-.+.
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 14689988766543
No 426
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=74.43 E-value=18 Score=24.75 Aligned_cols=67 Identities=22% Similarity=0.111 Sum_probs=42.5
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcC-CeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-C--CCCCeeEE
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSS-TSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-F--PDNSFDAV 172 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-~--~~~~fD~v 172 (305)
.+++|+=+|+ |..+..++. ..+ .+|+++|.++..++... ...+.++..|..+.. + .-..+|+|
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 3468999998 555555542 235 78999999987766543 124677788876521 0 01357888
Q ss_pred Eecc
Q 042544 173 YAIE 176 (305)
Q Consensus 173 ~~~~ 176 (305)
+..-
T Consensus 74 i~~~ 77 (118)
T 3ic5_A 74 ISAA 77 (118)
T ss_dssp EECS
T ss_pred EECC
Confidence 7653
No 427
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=74.23 E-value=14 Score=29.62 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=51.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.++++|=.|++ |.....+++ ..+.+|+.++.++..++...+.+...+ .++.++..|+.+.. + ..
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678867755 444444442 137899999999988887777666554 35889999997631 0 12
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468988876543
No 428
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=73.81 E-value=12 Score=30.53 Aligned_cols=76 Identities=16% Similarity=0.064 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+.+||=.|++ |..+..+++ ..+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46788877765 555555542 137899999999988887777666543 36889999987632 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 358988876544
No 429
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=73.03 E-value=12 Score=30.62 Aligned_cols=76 Identities=16% Similarity=0.007 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++.| .+..+++ ..+++|+.++.++..++.+.+.+...+ .++.++.+|+.+.. +. -
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567887776644 4444442 138999999999988887777666543 35788889987631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876544
No 430
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=72.93 E-value=15 Score=30.38 Aligned_cols=76 Identities=20% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
++.++|=.|++.| ....+++ ..+++|+.+|.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4678887887654 4444442 137899999999988877766654433 46889999997631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 104 g~iD~lVnnAg~ 115 (283)
T 3v8b_A 104 GHLDIVVANAGI 115 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876544
No 431
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=72.47 E-value=11 Score=30.66 Aligned_cols=75 Identities=13% Similarity=0.021 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |.....+++ ..+++|+.+|.++..++.+.+.+... ..++.++.+|+.+.. +. -
T Consensus 5 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 5 KEKVVIITGGS-SGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45678866655 444444442 13789999999998888776665443 346889999997631 00 1
Q ss_pred CCeeEEEeccc
Q 042544 167 NSFDAVYAIEA 177 (305)
Q Consensus 167 ~~fD~v~~~~~ 177 (305)
+..|+++.+-.
T Consensus 82 g~id~lv~nAg 92 (257)
T 3imf_A 82 GRIDILINNAA 92 (257)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36798887654
No 432
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=71.37 E-value=3.3 Score=35.59 Aligned_cols=92 Identities=10% Similarity=0.081 Sum_probs=54.4
Q ss_pred CC-CeEEEE-cCC-CChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-CCCCee
Q 042544 100 SG-QKVLDV-GCG-IGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-PDNSFD 170 (305)
Q Consensus 100 ~~-~~vLDi-GcG-~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~fD 170 (305)
++ .+||=. |+| .|..+..+++..+++|++++.++..++.+++. |.. .++..+-.++. . ....+|
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GAA---HVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TCS---EEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEEECCcHHHHHHHHHHhcCCCCc
Confidence 44 566643 333 45566666655689999999999888877653 321 22222111110 0 013589
Q ss_pred EEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEEe
Q 042544 171 AVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIWE 216 (305)
Q Consensus 171 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~~ 216 (305)
+|+-+-.- . .+..+.++|+++|.+++..
T Consensus 236 ~vid~~g~-----~-------------~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVTG-----P-------------LASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSCH-----H-------------HHHHHHHHSCTTCEEEECC
T ss_pred EEEECCCC-----h-------------hHHHHHhhhcCCCEEEEEe
Confidence 88754221 1 2567889999999988753
No 433
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=71.36 E-value=16 Score=29.79 Aligned_cols=77 Identities=19% Similarity=0.096 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |.....+++. .+++|+.++.++..++.+.+.+...+ ..++.++.+|+.+.. +. -
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 46788866655 4455554421 37899999999988887766665543 246889999997632 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 434
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=70.73 E-value=23 Score=28.44 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |..+..+++ ..+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 6 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGAS-SGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45688877765 444544442 137899999999888776665555433 35888999987621 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 83 g~id~lv~nAg~ 94 (247)
T 2jah_A 83 GGLDILVNNAGI 94 (247)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 435
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=70.64 E-value=21 Score=29.74 Aligned_cols=76 Identities=13% Similarity=0.111 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCC------------HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNN------------EYQITRGKELNRFAGVDKTCNFVKADFMKMP- 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~- 163 (305)
.++++|=.|++.|. .+..|++. +++|+.+|.+ +..++.+.+.+...+ .++.++.+|+.+..
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE-GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDA 103 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHH
Confidence 46788888876553 33334443 8999999987 666666655555543 46889999998632
Q ss_pred ----CC-----CCCeeEEEecccc
Q 042544 164 ----FP-----DNSFDAVYAIEAT 178 (305)
Q Consensus 164 ----~~-----~~~fD~v~~~~~l 178 (305)
+. -+..|+++.+-.+
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 00 1468988876543
No 436
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=70.31 E-value=22 Score=28.49 Aligned_cols=76 Identities=14% Similarity=0.080 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |..+..+++. .+.+|++++.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45688877754 5555555531 37899999999877765555554433 35889999987631 10 0
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+|+.+...
T Consensus 89 ~~id~vi~~Ag~ 100 (260)
T 3awd_A 89 GRVDILVACAGI 100 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 357988876543
No 437
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=70.06 E-value=22 Score=28.94 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |..+..+++. .+.+|+++|.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 45788877754 5555555532 37899999999887776655555443 36889999987631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+|+.+...
T Consensus 107 g~iD~li~~Ag~ 118 (272)
T 1yb1_A 107 GDVSILVNNAGV 118 (272)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 368988876543
No 438
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=69.89 E-value=16 Score=29.96 Aligned_cols=70 Identities=9% Similarity=-0.041 Sum_probs=46.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC---------CCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP---------FPDN 167 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~---------~~~~ 167 (305)
.+.++|=.|++.| ....+++ ..+.+|+.+|.++..++...+.+ ..++.++.+|+.+.. -..+
T Consensus 29 ~~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (281)
T 3ppi_A 29 EGASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAANQLG 102 (281)
T ss_dssp TTEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 4667887776654 4444442 13889999999988777665543 246899999988632 1124
Q ss_pred CeeEEEec
Q 042544 168 SFDAVYAI 175 (305)
Q Consensus 168 ~fD~v~~~ 175 (305)
..|.++.+
T Consensus 103 ~id~lv~~ 110 (281)
T 3ppi_A 103 RLRYAVVA 110 (281)
T ss_dssp EEEEEEEC
T ss_pred CCCeEEEc
Confidence 67888866
No 439
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=69.86 E-value=23 Score=29.05 Aligned_cols=76 Identities=18% Similarity=0.100 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++ ..+.+|++++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 21 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 21 DSEVALVTGAT-SGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TSCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 45688877765 445555442 137899999999887776655554433 35888999987621 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+++.+-..
T Consensus 98 g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 98 GPVDVLVNNAGR 109 (277)
T ss_dssp CSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 440
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=69.80 E-value=23 Score=28.87 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP------ 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~------ 165 (305)
.++++|=.|++ |.....+++ ..+++|+.++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788877765 445555442 137899999999887776655554433 35888999987621 10
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
++..|+++.+-..
T Consensus 97 ~g~id~lv~nAg~ 109 (273)
T 1ae1_A 97 DGKLNILVNNAGV 109 (273)
T ss_dssp TSCCCEEEECCCC
T ss_pred CCCCcEEEECCCC
Confidence 1568988876543
No 441
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=69.70 E-value=20 Score=29.05 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCC--Ch---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----
Q 042544 100 SGQKVLDVGCGI--GG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F----- 164 (305)
Q Consensus 100 ~~~~vLDiGcG~--G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 164 (305)
+++++|=-|++. |. .+..|++. +++|+.+|.++..++.+.+.++..+. .++.+++.|+.+.. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~-Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL-GAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 578899888643 42 34445554 89999999999888887777766543 36888999987621 0
Q ss_pred CCCCeeEEEeccc
Q 042544 165 PDNSFDAVYAIEA 177 (305)
Q Consensus 165 ~~~~fD~v~~~~~ 177 (305)
.-+..|.++.+-.
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 1156898886544
No 442
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=69.51 E-value=16 Score=29.86 Aligned_cols=76 Identities=14% Similarity=0.042 Sum_probs=49.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |.....+++ ..+++|+.++.++..++...+.+...+. ++.++..|+.+.. +. -
T Consensus 27 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 27 DKQVAIVTGAS-RGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL--EGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--cEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 45678866654 444544442 1388999999999888777666655443 5788889987631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 104 g~iD~lvnnAg~ 115 (270)
T 3ftp_A 104 GALNVLVNNAGI 115 (270)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 443
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=69.18 E-value=22 Score=29.10 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCCChHHHHH----HhhcCCeEEEEcC-------------CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 042544 100 SGQKVLDVGCGIGGPLREI----AQFSSTSVTGLNN-------------NEYQITRGKELNRFAGVDKTCNFVKADFMKM 162 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l----~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~ 162 (305)
.++++|=.|++.| ....+ ++. +++|+.+|. ++..++...+.+...+ .++.++..|+.+.
T Consensus 14 ~gk~~lVTGas~g-IG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 14 QGRVAFITGAARG-QGRSHAVRLAAE-GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDD 89 (280)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHC-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCH
Confidence 5678887777655 44444 343 899999998 6777776666655443 4688999998763
Q ss_pred C-----CC-----CCCeeEEEeccccc
Q 042544 163 P-----FP-----DNSFDAVYAIEATC 179 (305)
Q Consensus 163 ~-----~~-----~~~fD~v~~~~~l~ 179 (305)
. +. -+..|+++.+-...
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1 00 13689888765443
No 444
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=69.13 E-value=23 Score=29.01 Aligned_cols=76 Identities=14% Similarity=0.076 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCC------------HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNN------------EYQITRGKELNRFAGVDKTCNFVKADFMKMP- 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~- 163 (305)
.+++||=.|++.| ....+++ ..+++|+.+|.+ ...++.+...+...+ .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 4678887777654 4444432 138999999987 666666665555443 46889999997632
Q ss_pred ----CC-----CCCeeEEEecccc
Q 042544 164 ----FP-----DNSFDAVYAIEAT 178 (305)
Q Consensus 164 ----~~-----~~~fD~v~~~~~l 178 (305)
+. -+..|+++.+-.+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCc
Confidence 00 1368988876544
No 445
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=69.05 E-value=23 Score=28.70 Aligned_cols=76 Identities=16% Similarity=0.093 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++. .....+++ ..+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 6 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 6 NGKVCLVTGAGG-NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 457888777654 44444442 137899999999887776655554433 35888899987631 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+++.+-..
T Consensus 83 g~id~lv~nAg~ 94 (262)
T 1zem_A 83 GKIDFLFNNAGY 94 (262)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 446
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=69.01 E-value=17 Score=30.19 Aligned_cols=77 Identities=13% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCCChHHHHHH----hhcCC---eEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC--------C
Q 042544 100 SGQKVLDVGCGIGGPLREIA----QFSST---SVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP--------F 164 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~ 164 (305)
.++++|=.|++.| ....++ +. +. +|+.++.+...++.+.+.+.......++.++.+|+.+.. .
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~-G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEA-SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHc-CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4678998887654 444444 33 44 999999999888877766655432346889999997632 1
Q ss_pred C--CCCeeEEEecccc
Q 042544 165 P--DNSFDAVYAIEAT 178 (305)
Q Consensus 165 ~--~~~fD~v~~~~~l 178 (305)
. -+..|+++.+-..
T Consensus 110 ~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 110 PQEFKDIDILVNNAGK 125 (287)
T ss_dssp CGGGCSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 1 1468998876543
No 447
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=68.95 E-value=22 Score=29.01 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCC------------HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNN------------EYQITRGKELNRFAGVDKTCNFVKADFMKMP- 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~- 163 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.+ +..++...+.+...+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4678887776544 4444432 138999999987 666666555555443 46899999998632
Q ss_pred ----CC-----CCCeeEEEeccccc
Q 042544 164 ----FP-----DNSFDAVYAIEATC 179 (305)
Q Consensus 164 ----~~-----~~~fD~v~~~~~l~ 179 (305)
+. -+..|+++.+-.+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 13689988766544
No 448
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=68.85 E-value=14 Score=30.42 Aligned_cols=77 Identities=13% Similarity=0.090 Sum_probs=51.1
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++.| ....+++ ..+++|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678887776654 4444442 137899999999887777766665543 36888999997632 00 1
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-...
T Consensus 108 g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 108 GGIDIAVCNAGIV 120 (276)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689988765443
No 449
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=68.61 E-value=23 Score=29.09 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCC----------------HHHHHHHHHHHHhcCCCCCeEEEEcCCC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNN----------------EYQITRGKELNRFAGVDKTCNFVKADFM 160 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s----------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~ 160 (305)
.++++|=.|++.|. .+..|++. +++|+.+|.+ ...++...+.+... ..++.++..|+.
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~ 86 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQE-GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVR 86 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC-CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCC
Confidence 46788888877653 33333443 8999999987 66666555555443 346889999997
Q ss_pred CCC-----CC-----CCCeeEEEecccc
Q 042544 161 KMP-----FP-----DNSFDAVYAIEAT 178 (305)
Q Consensus 161 ~~~-----~~-----~~~fD~v~~~~~l 178 (305)
+.. +. -+..|+++.+-.+
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 631 00 1368988876544
No 450
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=68.51 E-value=18 Score=29.76 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |..+..+++ ..+.+|++++.++..++...+.+...+. .++.++.+|+.+.. +. -
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA-ASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-SEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC-CceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46788877754 555555542 1378999999999887766555544332 35888999987621 00 1
Q ss_pred CCeeEEEec
Q 042544 167 NSFDAVYAI 175 (305)
Q Consensus 167 ~~fD~v~~~ 175 (305)
+.+|+++.+
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 368998866
No 451
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=67.87 E-value=22 Score=29.20 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++.|. .+..|++. +++|+.+|.++..++.+.+.+ ..++.++.+|+.+.. +. -
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADE-GCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788877766553 33334443 889999999988776655443 235788999987632 00 1
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-...
T Consensus 102 g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 102 GGVDKLVANAGVV 114 (277)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689888765543
No 452
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=67.70 E-value=24 Score=29.20 Aligned_cols=73 Identities=10% Similarity=0.080 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
+|+++|=-|++.|. .+..|++. +++|+.+|.+++.++.+.+.+ + .++..+++|+.+.. + .-
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~-Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE-GARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 57788888877663 33444444 899999999998887665443 2 35778889987631 0 11
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 102 G~iDiLVNNAG~ 113 (273)
T 4fgs_A 102 GRIDVLFVNAGG 113 (273)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 568988876543
No 453
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=67.61 E-value=1.8 Score=47.49 Aligned_cols=100 Identities=15% Similarity=0.055 Sum_probs=64.3
Q ss_pred HcCCCCCCeEEEEcC--CCChHHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-----CCC-CC
Q 042544 95 QLGLKSGQKVLDVGC--GIGGPLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK-----MPF-PD 166 (305)
Q Consensus 95 ~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~-----~~~-~~ 166 (305)
...+.+|.+||=.|+ |.|..+..+++..+++|++++.++...+.+++.....+.. .++...-.+ ... ..
T Consensus 1662 ~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~---~v~~~~~~~~~~~i~~~t~g 1738 (2512)
T 2vz8_A 1662 RGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET---CFANSRDTSFEQHVLRHTAG 1738 (2512)
T ss_dssp TTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST---TEEESSSSHHHHHHHHTTTS
T ss_pred HhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce---EEecCCCHHHHHHHHHhcCC
Confidence 356789999998864 4677778888767899999999998887776643222221 122111111 011 12
Q ss_pred CCeeEEEecccccccCChhhhhhcCCCCCcccHHHHHHHHHhCCceEEE
Q 042544 167 NSFDAVYAIEATCHAPDAAEIEIGDGLPDIRSTRKCLEALKQAGFEVIW 215 (305)
Q Consensus 167 ~~fD~v~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~~~i~ 215 (305)
..+|+|+-+.. .. .+....++|+++|.++..
T Consensus 1739 ~GvDvVld~~g------~~------------~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1739 KGVDLVLNSLA------EE------------KLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp CCEEEEEECCC------HH------------HHHHHHTTEEEEEEEEEC
T ss_pred CCceEEEECCC------ch------------HHHHHHHhcCCCcEEEEe
Confidence 35899985321 11 478888999999988764
No 454
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=67.56 E-value=15 Score=32.15 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cC-CeEEEEcCCHHHHHHHHHHHHhcC--CCCCeEEEEcCCCCCC-----CCCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SS-TSVTGLNNNEYQITRGKELNRFAG--VDKTCNFVKADFMKMP-----FPDNS 168 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~-~~v~gvD~s~~~l~~a~~~~~~~~--~~~~~~~~~~d~~~~~-----~~~~~ 168 (305)
.+++||=.| |+|..+..+++. .+ .+|++++.++..+....+.+.... ...++.++.+|+.+.. +....
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 357898666 457777776642 25 699999999987765555443321 1246889999988632 12256
Q ss_pred eeEEEecccccccC
Q 042544 169 FDAVYAIEATCHAP 182 (305)
Q Consensus 169 fD~v~~~~~l~~~~ 182 (305)
+|+|+......|.+
T Consensus 113 ~D~Vih~Aa~~~~~ 126 (399)
T 3nzo_A 113 YDYVLNLSALKHVR 126 (399)
T ss_dssp CSEEEECCCCCCGG
T ss_pred CCEEEECCCcCCCc
Confidence 89998776665553
No 455
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=67.32 E-value=16 Score=29.61 Aligned_cols=61 Identities=16% Similarity=0.064 Sum_probs=39.9
Q ss_pred CCCeEEEEcCCCChHHHHHH----hh--cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCC
Q 042544 100 SGQKVLDVGCGIGGPLREIA----QF--SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMK 161 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~----~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~ 161 (305)
.++++|=.|++. .....++ +. .+.+|+.++.++..++...+.+.......++.++.+|+.+
T Consensus 5 ~~k~~lVTGas~-gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 5 GCAVCVLTGASR-GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT 71 (259)
T ss_dssp BSEEEEESSCSS-HHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS
T ss_pred CCcEEEEeCCCC-hHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC
Confidence 356777666654 4444444 31 3789999999988777665555443212358889999876
No 456
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=66.97 E-value=24 Score=28.44 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=49.5
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP------ 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~------ 165 (305)
.+++||=.|++ |.....+++ ..+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 8 ~~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788877764 455555442 137899999999887776555554433 35788999987631 10
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
.+..|+++.+-..
T Consensus 85 ~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 85 HGKLNILVNNAGI 97 (260)
T ss_dssp TTCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 0568988876543
No 457
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=66.89 E-value=20 Score=29.06 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC----------CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF----------PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~----------~~ 166 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.++..++...+.. ..++.++.+|+.+..- .-
T Consensus 7 ~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 5678888887654 4444442 13789999999988877665543 2358899999876320 01
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 81 g~id~lv~nAg~ 92 (255)
T 4eso_A 81 GAIDLLHINAGV 92 (255)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468988876543
No 458
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=66.87 E-value=13 Score=30.54 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.++++|=.|++ |.....+++ ..+++|+.+|.++..++...+.+...+ .++.++.+|+.+.. + .-
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 46788866655 444554442 137899999999988887777665544 35888889987632 0 01
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-.+.
T Consensus 102 g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 102 IDVDILVNNAGIQ 114 (271)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3689888765443
No 459
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=66.79 E-value=28 Score=27.05 Aligned_cols=69 Identities=14% Similarity=0.084 Sum_probs=44.7
Q ss_pred CeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-CCCCeeEEEeccc
Q 042544 102 QKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-PDNSFDAVYAIEA 177 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~fD~v~~~~~ 177 (305)
++||=.| |+|..+..+++. .+.+|++++.++..+... ...+++++.+|+.+... .-+.+|+|+....
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEADLDSVDAVVDALS 71 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHHHTTCSEEEECCC
T ss_pred CEEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhhcccCCEEEECCc
Confidence 3577666 457666666532 378999999988765422 12468999999986431 0135798887655
Q ss_pred cc
Q 042544 178 TC 179 (305)
Q Consensus 178 l~ 179 (305)
..
T Consensus 72 ~~ 73 (224)
T 3h2s_A 72 VP 73 (224)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 460
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=66.77 E-value=11 Score=31.09 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=49.2
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.++..++...+.+... ..++.++.+|+.+.. +. -
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678887776644 4444442 13889999999998887776665443 246888888987631 00 1
Q ss_pred CCeeEEEeccc
Q 042544 167 NSFDAVYAIEA 177 (305)
Q Consensus 167 ~~fD~v~~~~~ 177 (305)
+..|+++.+-.
T Consensus 84 g~iD~lvnnAg 94 (280)
T 3tox_A 84 GGLDTAFNNAG 94 (280)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36898887654
No 461
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=66.62 E-value=27 Score=28.89 Aligned_cols=76 Identities=17% Similarity=0.105 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 33 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 33 KGKIALVTGAS-YGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAG--INAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788877765 4555555421 37899999999887766655554433 35788999987621 10 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 110 g~iD~lvnnAg~ 121 (291)
T 3cxt_A 110 GIIDILVNNAGI 121 (291)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 358988876543
No 462
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=66.51 E-value=42 Score=26.35 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=44.2
Q ss_pred eEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-------CCCCCeeEE
Q 042544 103 KVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-------FPDNSFDAV 172 (305)
Q Consensus 103 ~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~fD~v 172 (305)
+||=.|++ |..+..+++ ..+.+|+.++.++..++.+.+.+ ..++.++..|+.+.. --.+.+|++
T Consensus 3 ~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~l 76 (230)
T 3guy_A 3 LIVITGAS-SGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPSTV 76 (230)
T ss_dssp CEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSEE
T ss_pred EEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCEE
Confidence 46766765 444444442 13789999999998876654432 346888999987621 112345888
Q ss_pred Eecccc
Q 042544 173 YAIEAT 178 (305)
Q Consensus 173 ~~~~~l 178 (305)
+.+...
T Consensus 77 v~~Ag~ 82 (230)
T 3guy_A 77 VHSAGS 82 (230)
T ss_dssp EECCCC
T ss_pred EEeCCc
Confidence 866543
No 463
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=66.48 E-value=29 Score=28.32 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcC-------------CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNN-------------NEYQITRGKELNRFAGVDKTCNFVKADFMKMP 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~ 163 (305)
.++++|=.|++.|. .+..|++. +++|+.+|. +...++...+.+...+ .++.++..|+.+..
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE-GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDFD 86 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHH
Confidence 46788878876553 33333343 899999998 6777666655555443 46889999987632
Q ss_pred -----CC-----CCCeeEEEeccccc
Q 042544 164 -----FP-----DNSFDAVYAIEATC 179 (305)
Q Consensus 164 -----~~-----~~~fD~v~~~~~l~ 179 (305)
+. -+..|+++.+-.+.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 10 14689888765443
No 464
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=66.39 E-value=20 Score=29.03 Aligned_cols=79 Identities=16% Similarity=0.112 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++ ..+.+|++++.++..++...+.+.......++.++.+|+.+.. +. -
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 45688877765 445554442 1378999999998776655444332111235788899987621 00 0
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-...
T Consensus 85 g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 85 GRLDILVNNAGVN 97 (267)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3579888765543
No 465
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=65.69 E-value=32 Score=28.26 Aligned_cols=76 Identities=13% Similarity=0.021 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcC-CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC-----C-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNN-NEYQITRGKELNRFAGVDKTCNFVKADFMKMPF-----P----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~----- 165 (305)
.++++|=.|++.| ....+++ ..+++|+.+|. ++..++...+.+...+ .++.++.+|+.+..- .
T Consensus 28 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 28 ARPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred CCCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4678887776654 4444432 13789999996 6766666655555443 468999999987421 0
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-.+
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 0368988876544
No 466
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=65.33 E-value=32 Score=27.72 Aligned_cols=77 Identities=10% Similarity=0.010 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++ ..+.+|+.++.++..++...+.+.......++.++.+|+.+.. +. -
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 6 QGKLAVVTAGS-SGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 45688877765 445555442 1378999999998877665554433211125888999987631 10 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+ .|+++.+-..
T Consensus 85 g-id~lv~~Ag~ 95 (260)
T 2z1n_A 85 G-ADILVYSTGG 95 (260)
T ss_dssp C-CSEEEECCCC
T ss_pred C-CCEEEECCCC
Confidence 4 8988876543
No 467
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=64.87 E-value=17 Score=30.03 Aligned_cols=77 Identities=19% Similarity=0.065 Sum_probs=48.5
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++ |.....+++. .+++|+.+|.++..++...+.+...+. ..+.++.+|+.+.. +. -
T Consensus 32 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGG-TGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788866655 4455554421 388999999999888776665544332 23588999997632 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 467988876544
No 468
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=64.53 E-value=27 Score=27.81 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCCC------------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMPF------------ 164 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~~------------ 164 (305)
.++++|=.|++ |.....+++. .+.+|+.++.++..++...+.+...+. .++.++..|+.....
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ-PQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS-CCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-CCceEEEeccccCCHHHHHHHHHHHHH
Confidence 46788877765 4455554421 378999999999988887777666542 357788887732110
Q ss_pred CCCCeeEEEecccc
Q 042544 165 PDNSFDAVYAIEAT 178 (305)
Q Consensus 165 ~~~~fD~v~~~~~l 178 (305)
.-+..|+++.+-..
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 01368988876543
No 469
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=64.11 E-value=57 Score=27.10 Aligned_cols=79 Identities=14% Similarity=0.086 Sum_probs=48.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEE-EcCCCCCC-CC--CCCeeE
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFV-KADFMKMP-FP--DNSFDA 171 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~~d~~~~~-~~--~~~fD~ 171 (305)
.++++||=.|+ +|..+..+++. .+.+|++++.++...+...+.+.... ..+++++ .+|+.+.. +. -..+|+
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence 35678996664 57777666532 37899999998776554443332211 1357888 78987632 11 125798
Q ss_pred EEeccccc
Q 042544 172 VYAIEATC 179 (305)
Q Consensus 172 v~~~~~l~ 179 (305)
|+......
T Consensus 87 vih~A~~~ 94 (342)
T 1y1p_A 87 VAHIASVV 94 (342)
T ss_dssp EEECCCCC
T ss_pred EEEeCCCC
Confidence 88665443
No 470
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=64.03 E-value=31 Score=27.81 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -
T Consensus 13 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 13 ENKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45678866654 5555555421 37899999999887766555554433 35788889987521 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 471
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=63.78 E-value=35 Score=27.54 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=47.9
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhc-CCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFA-GVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.+++||=.|++ |.....+++ ..+.+|+.++.++..++...+.+... + .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 6 SGKVAVITGSS-SGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG--VRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45688877765 445555442 13789999999987776555444332 2 35888999987631 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 83 ~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 83 FGGADILVNNAGT 95 (263)
T ss_dssp HSSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 0368988876543
No 472
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=63.70 E-value=19 Score=29.52 Aligned_cols=75 Identities=19% Similarity=0.135 Sum_probs=47.5
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++ |.....+++ ..+.+|+.+|.++..++...+.+...+ ++.++.+|+.+.. +. -
T Consensus 28 ~~k~vlVTGas-~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 28 AGRIALVTGGS-RGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS---CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 45688877765 445555442 137899999999887765555443322 5788888887621 00 1
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 104 g~iD~lvnnAg~ 115 (276)
T 2b4q_A 104 ARLDILVNNAGT 115 (276)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 368988876543
No 473
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=63.59 E-value=23 Score=28.60 Aligned_cols=74 Identities=19% Similarity=0.154 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC------
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP------ 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~------ 165 (305)
.++++|=.|++ |.....+++. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 4 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 4 NGQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG--GQCVPVVCDSSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS--SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC--CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 35678866654 5555555421 37899999999887766655554433 35788999987631 00
Q ss_pred CCCeeEEEecc
Q 042544 166 DNSFDAVYAIE 176 (305)
Q Consensus 166 ~~~fD~v~~~~ 176 (305)
.+.+|+++.+-
T Consensus 81 ~g~id~lvnnA 91 (260)
T 2qq5_A 81 QGRLDVLVNNA 91 (260)
T ss_dssp TTCCCEEEECC
T ss_pred CCCceEEEECC
Confidence 24679888765
No 474
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=63.51 E-value=23 Score=28.49 Aligned_cols=72 Identities=18% Similarity=0.152 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCCChHHHHH----HhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREI----AQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l----~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++.| ....+ ++. +++|+.+|.++..++...+.+ ..++.++.+|+.+.. +.
T Consensus 5 ~gk~vlVTGas~g-IG~a~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 5 AGKTALVTGAAQG-IGKAIAARLAAD-GATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL 77 (247)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678887886654 44444 333 899999999988776655443 236888888987631 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 78 ~g~id~lv~nAg~ 90 (247)
T 3rwb_A 78 TGGIDILVNNASI 90 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 1368988876543
No 475
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=63.44 E-value=33 Score=27.67 Aligned_cols=73 Identities=15% Similarity=0.115 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.++++|=.|++. .....+++ ..+.+|+.+|.++..++...+.+ ..++.++.+|+.+.. + .-
T Consensus 7 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSAR-GIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence 467888777654 44444442 13789999999988776655433 235788999997631 0 01
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-..
T Consensus 81 g~id~lv~~Ag~ 92 (259)
T 4e6p_A 81 GGLDILVNNAAL 92 (259)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368988876544
No 476
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=63.44 E-value=35 Score=27.82 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCC------------HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNN------------EYQITRGKELNRFAGVDKTCNFVKADFMKMP- 163 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~- 163 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.+ ...++...+.+...+ .++.++.+|+.+..
T Consensus 9 ~~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 9 EGKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAA 85 (281)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4678898887654 4444442 138899999986 555655555554443 46889999997631
Q ss_pred ----CC-----CCCeeEEEeccccc
Q 042544 164 ----FP-----DNSFDAVYAIEATC 179 (305)
Q Consensus 164 ----~~-----~~~fD~v~~~~~l~ 179 (305)
+. -+..|+++.+-.+.
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCC
Confidence 00 13689888765443
No 477
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=63.41 E-value=26 Score=28.13 Aligned_cols=77 Identities=17% Similarity=0.068 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCC--CCCC-----C-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADF--MKMP-----F----- 164 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~--~~~~-----~----- 164 (305)
.++++|=.|++.| ....+++ ..+++|+.+|.++..++...+.+...+. .++.++..|+ .+.. +
T Consensus 11 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDG-IGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHH
Confidence 4678887776644 4444442 1378999999999888776665544332 2578889998 3311 0
Q ss_pred CCCCeeEEEecccc
Q 042544 165 PDNSFDAVYAIEAT 178 (305)
Q Consensus 165 ~~~~fD~v~~~~~l 178 (305)
.-+..|+++.+-..
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 01468988876543
No 478
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=63.31 E-value=23 Score=29.04 Aligned_cols=78 Identities=21% Similarity=0.188 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCC-CCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGV-DKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++ |.....+++ ..+.+|+.++.++..++...+.+...+. ..++.++.+|+.+.. +.
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGSS-NGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45678866654 445555542 1378999999998877766555543321 115888999987631 10
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+.+|+++.+-..
T Consensus 84 ~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 84 FGKIDVLVNNAGA 96 (280)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1358988876543
No 479
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=63.27 E-value=14 Score=30.81 Aligned_cols=77 Identities=19% Similarity=0.075 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CC
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PD 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~ 166 (305)
.+++||=.|++ |.....+++ ..+++|+.+|.++..++...+.+...+. .++.++.+|+.+.. + .-
T Consensus 40 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGT-KGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 46678866655 444444442 1378999999998877776666554431 36889999998631 0 01
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+..|+++.+-.+
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 367988876543
No 480
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=62.92 E-value=26 Score=27.92 Aligned_cols=72 Identities=15% Similarity=0.124 Sum_probs=46.7
Q ss_pred CCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----CC
Q 042544 101 GQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----DN 167 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~~ 167 (305)
++++|=.|++.| ....+++ ..+.+|+.++.++..++...+.+. .++.++.+|+.+.. +. .+
T Consensus 3 ~k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 457887776654 4444442 138999999999988776655542 24889999987631 00 13
Q ss_pred CeeEEEecccc
Q 042544 168 SFDAVYAIEAT 178 (305)
Q Consensus 168 ~fD~v~~~~~l 178 (305)
..|+++.+-.+
T Consensus 77 ~id~lvnnAg~ 87 (235)
T 3l6e_A 77 LPELVLHCAGT 87 (235)
T ss_dssp SCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 67988876543
No 481
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=62.69 E-value=26 Score=27.69 Aligned_cols=72 Identities=24% Similarity=0.219 Sum_probs=45.8
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCe-EEEEcCCCC-CCCCCCCeeEEEe
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTC-NFVKADFMK-MPFPDNSFDAVYA 174 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~-~~~~~d~~~-~~~~~~~fD~v~~ 174 (305)
.+++||=.|+ +|..+..+++. .+.+|++++.++..++.... .++ +++.+|+.+ +.-.-+.+|+|+.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 4788997764 56666666532 37899999998876544322 247 889999862 1111135899887
Q ss_pred cccccc
Q 042544 175 IEATCH 180 (305)
Q Consensus 175 ~~~l~~ 180 (305)
......
T Consensus 91 ~ag~~~ 96 (236)
T 3e8x_A 91 AAGSGP 96 (236)
T ss_dssp CCCCCT
T ss_pred CCCCCC
Confidence 665443
No 482
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=62.69 E-value=39 Score=26.55 Aligned_cols=77 Identities=13% Similarity=-0.012 Sum_probs=49.4
Q ss_pred CCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHH-hcCCCCCeEEEEcCCCCCC-----CCC-----
Q 042544 101 GQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNR-FAGVDKTCNFVKADFMKMP-----FPD----- 166 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~-~~~~~~~~~~~~~d~~~~~-----~~~----- 166 (305)
++++|=.|++ |..+..+++. .+.+|+.++.++..++...+.+. ..+ .++.++.+|+.+.. +..
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG--VEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--CeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 4577877765 4455554421 37899999999888776655543 222 46889999997631 111
Q ss_pred CCeeEEEecccccc
Q 042544 167 NSFDAVYAIEATCH 180 (305)
Q Consensus 167 ~~fD~v~~~~~l~~ 180 (305)
+..|+++.+-.+.+
T Consensus 79 g~id~li~~Ag~~~ 92 (235)
T 3l77_A 79 GDVDVVVANAGLGY 92 (235)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCcccc
Confidence 36898887665433
No 483
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=62.61 E-value=31 Score=28.05 Aligned_cols=76 Identities=20% Similarity=0.085 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcC-CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNN-NEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----P 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~ 165 (305)
.+++||=.|++.| .+..+++ ..+.+|+.++. ++...+...+.+...+ .++.++.+|+.+.. + .
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHh
Confidence 4678887776544 4444442 13789999998 5565555555555543 36889999987631 0 0
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
.+..|+++.+...
T Consensus 105 ~g~id~li~nAg~ 117 (271)
T 4iin_A 105 DGGLSYLVNNAGV 117 (271)
T ss_dssp HSSCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368988876543
No 484
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=62.04 E-value=40 Score=27.05 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=47.0
Q ss_pred CeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----CCC
Q 042544 102 QKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----DNS 168 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~~~ 168 (305)
+++|=.|++ |.....+++. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +. -+.
T Consensus 3 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTGAG-QGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 467767754 4455555421 37899999999887766655554433 35888999987631 00 136
Q ss_pred eeEEEeccc
Q 042544 169 FDAVYAIEA 177 (305)
Q Consensus 169 fD~v~~~~~ 177 (305)
+|+++.+-.
T Consensus 80 id~lv~nAg 88 (256)
T 1geg_A 80 FDVIVNNAG 88 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898887654
No 485
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=61.86 E-value=27 Score=28.54 Aligned_cols=76 Identities=14% Similarity=0.053 Sum_probs=48.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.++++|=.|++.| ....+++ ..+++|+.++.+...++.+.+.+.... ..++.++.+|+.+.. +. -
T Consensus 26 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSG-IGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678887877654 4444442 137899999999877766555443221 236889999997631 00 1
Q ss_pred CCeeEEEeccc
Q 042544 167 NSFDAVYAIEA 177 (305)
Q Consensus 167 ~~fD~v~~~~~ 177 (305)
+..|+++.+-.
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 36898887654
No 486
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=61.72 E-value=43 Score=27.67 Aligned_cols=76 Identities=12% Similarity=0.031 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCC--h---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----
Q 042544 100 SGQKVLDVGCGIG--G---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F----- 164 (305)
Q Consensus 100 ~~~~vLDiGcG~G--~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~----- 164 (305)
.++++|=.|++.| . .+..|++. +++|+.++.++...+.+.+.....+ ++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 5678998887633 2 34444444 8899999998766555555444332 4788999997631 0
Q ss_pred CCCCeeEEEeccccc
Q 042544 165 PDNSFDAVYAIEATC 179 (305)
Q Consensus 165 ~~~~fD~v~~~~~l~ 179 (305)
.-+..|+++.+-.+.
T Consensus 106 ~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 106 KWGKLDFLVHAIGFS 120 (293)
T ss_dssp HTSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCccC
Confidence 014689988765443
No 487
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=61.47 E-value=11 Score=33.96 Aligned_cols=65 Identities=12% Similarity=0.119 Sum_probs=45.3
Q ss_pred CCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 101 GQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 101 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
.++|+=+||| ..+..+++. .+..|+.+|.++..++.+...+ .+..+++|+.+.. ..-+..|+++
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 4678877775 566666643 2678999999999988766532 3678999998632 1124578877
Q ss_pred e
Q 042544 174 A 174 (305)
Q Consensus 174 ~ 174 (305)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 5
No 488
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=61.31 E-value=35 Score=27.51 Aligned_cols=76 Identities=16% Similarity=0.048 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEE-cCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGL-NNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
+++++|=.|++ |.....+++ ..+++|+.+ +.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlVTGas-~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 3 QNKCALVTGSS-RGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG--VKVLVVKANVGQPAKIKEMFQQIDET 79 (258)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46678866655 445555442 137898886 888887777666655443 46889999997632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 80 ~g~id~lv~nAg~ 92 (258)
T 3oid_A 80 FGRLDVFVNNAAS 92 (258)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1357988876543
No 489
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=61.21 E-value=37 Score=27.22 Aligned_cols=74 Identities=18% Similarity=0.094 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.|++.|. .+..|++. +.+|+.++.++..++...+.. ..++.++..|+.+.. +. -
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG-GAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAALSKF 81 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 46788888876552 33334443 789999999998877655533 246889999987632 00 1
Q ss_pred CCeeEEEeccccc
Q 042544 167 NSFDAVYAIEATC 179 (305)
Q Consensus 167 ~~fD~v~~~~~l~ 179 (305)
+..|+++.+-...
T Consensus 82 g~id~li~~Ag~~ 94 (261)
T 3n74_A 82 GKVDILVNNAGIG 94 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCccC
Confidence 3679888765443
No 490
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=60.89 E-value=33 Score=27.26 Aligned_cols=76 Identities=16% Similarity=0.047 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----C
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP-----D 166 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~ 166 (305)
.+++||=.| |+|..+..+++. .+.+|++++.++..++...+.+...+ .++.++.+|+.+.. +. .
T Consensus 10 ~~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 456788565 556666666532 37899999999887766555554433 35888899987621 10 0
Q ss_pred CCeeEEEecccc
Q 042544 167 NSFDAVYAIEAT 178 (305)
Q Consensus 167 ~~fD~v~~~~~l 178 (305)
+.+|+|+.+...
T Consensus 87 ~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 87 GKVDILVNNAGG 98 (255)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 268988876543
No 491
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=60.81 E-value=37 Score=27.04 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-CCCCe
Q 042544 99 KSGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-PDNSF 169 (305)
Q Consensus 99 ~~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-~~~~f 169 (305)
.++.+||=.|++ |.....+++ ..+.+|+.++.++..++...+.+ ..++.+...|+.+.. + ..+..
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 367789977765 445555442 13789999999988877655543 246888899987621 1 11468
Q ss_pred eEEEecccc
Q 042544 170 DAVYAIEAT 178 (305)
Q Consensus 170 D~v~~~~~l 178 (305)
|+++.+...
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 988876543
No 492
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=60.51 E-value=36 Score=27.71 Aligned_cols=76 Identities=20% Similarity=0.090 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcC-CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNN-NEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.+++||=.|++ |.....+++ ..+++|+.++. +...++...+.+...+ .++.++.+|+.+.. +.
T Consensus 27 ~~k~vlVTGas-~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 27 TDRIALVTGAS-RGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIER 103 (269)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46678866655 444544442 13789999888 6666666655555543 36889999998632 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-.+
T Consensus 104 ~g~id~lv~nAg~ 116 (269)
T 4dmm_A 104 WGRLDVLVNNAGI 116 (269)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1368988876544
No 493
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=60.50 E-value=14 Score=31.45 Aligned_cols=44 Identities=30% Similarity=0.222 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCCChH--HHHHHhhcCCeEEEEcCCHHHHHHHHHHHH
Q 042544 100 SGQKVLDVGCGIGGP--LREIAQFSSTSVTGLNNNEYQITRGKELNR 144 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~--~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~ 144 (305)
...+|.=||+|+=.. +..++. .+..|+.+|+++..++.+.+++.
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~~~l~~~~~~i~ 50 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEPRQITGALENIR 50 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCHHHHHHHHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHH
Confidence 345899999986433 333334 48999999999999888766553
No 494
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=60.31 E-value=37 Score=27.36 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=49.3
Q ss_pred CCCeEEEEcCC--CCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC----
Q 042544 100 SGQKVLDVGCG--IGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP---- 165 (305)
Q Consensus 100 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 165 (305)
.++++|=.|++ .|. .+..|++. +++|+.++.+....+.+.+.....+. .++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46789988876 333 33444444 89999999887666655555544332 26899999998632 00
Q ss_pred -CCCeeEEEecccc
Q 042544 166 -DNSFDAVYAIEAT 178 (305)
Q Consensus 166 -~~~fD~v~~~~~l 178 (305)
.+.+|.++.+-.+
T Consensus 84 ~~g~id~li~~Ag~ 97 (266)
T 3oig_A 84 QVGVIHGIAHCIAF 97 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeeEEEEcccc
Confidence 1367888876543
No 495
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=60.27 E-value=33 Score=27.69 Aligned_cols=74 Identities=15% Similarity=0.126 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCChHHHHH----HhhcCCeEEEE-cCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC----
Q 042544 100 SGQKVLDVGCGIGGPLREI----AQFSSTSVTGL-NNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP---- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l----~~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~---- 165 (305)
.++++|=.|++.| ....+ ++. +++|+.+ +.+....+.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~-G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQE-GANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHT-TCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4678887887655 44444 343 7899988 777776666655555443 46889999997632 00
Q ss_pred -CCCeeEEEeccc
Q 042544 166 -DNSFDAVYAIEA 177 (305)
Q Consensus 166 -~~~fD~v~~~~~ 177 (305)
-+..|+++.+..
T Consensus 83 ~~g~id~lv~nAg 95 (259)
T 3edm_A 83 KFGEIHGLVHVAG 95 (259)
T ss_dssp HHCSEEEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 136898887653
No 496
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=60.05 E-value=43 Score=27.19 Aligned_cols=76 Identities=18% Similarity=0.094 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCCChHHHHHHh---hcCCeEEEEcCCHHHHHHHHHHH-HhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---FSSTSVTGLNNNEYQITRGKELN-RFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|++ |..+..+++ ..+.+|+.++.++..++...+.+ ...+ .++.++.+|+.+.. +.
T Consensus 20 ~~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 20 RGRVALVTGGS-RGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG--VETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788877765 445555442 13789999999987776555444 2223 35788889987621 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+.+|+++.+-..
T Consensus 97 ~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 97 FGKLDTVVNAAGI 109 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1368988876543
No 497
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.77 E-value=33 Score=25.03 Aligned_cols=67 Identities=13% Similarity=0.057 Sum_probs=41.0
Q ss_pred CeEEEEcCCCChHHHHHHhh---cCCeEEEEcCC-HHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC----CCCCCeeEEE
Q 042544 102 QKVLDVGCGIGGPLREIAQF---SSTSVTGLNNN-EYQITRGKELNRFAGVDKTCNFVKADFMKMP----FPDNSFDAVY 173 (305)
Q Consensus 102 ~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~fD~v~ 173 (305)
.+|+=+|| |..+..+++. .+.+|+.+|.+ +...+...... ...+.++.+|..+.. ..-...|+|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 46777776 6677666632 37899999997 45443333221 234788999986521 1124578887
Q ss_pred ec
Q 042544 174 AI 175 (305)
Q Consensus 174 ~~ 175 (305)
+.
T Consensus 77 ~~ 78 (153)
T 1id1_A 77 AL 78 (153)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 498
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=59.75 E-value=38 Score=27.17 Aligned_cols=75 Identities=15% Similarity=0.026 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCCChHHHHHHh---h-cCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQ---F-SSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~---~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
++++||=.| |+|..+..+++ . .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 456788555 55666666653 2 47899999999887776666555443 35889999987631 00
Q ss_pred CCCeeEEEeccc
Q 042544 166 DNSFDAVYAIEA 177 (305)
Q Consensus 166 ~~~fD~v~~~~~ 177 (305)
-+.+|+|+.+-.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 026898886543
No 499
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=59.41 E-value=40 Score=26.87 Aligned_cols=76 Identities=20% Similarity=0.105 Sum_probs=47.6
Q ss_pred CCCeEEEEcCCCChHHHHHHhh---cCCeEEEEcC-CHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----CC-----
Q 042544 100 SGQKVLDVGCGIGGPLREIAQF---SSTSVTGLNN-NEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----FP----- 165 (305)
Q Consensus 100 ~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~~----- 165 (305)
.++++|=.|+ +|.....+++. .+.+|+.++. ++..++...+.+...+ .++.++.+|+.+.. +.
T Consensus 3 ~~k~vlVTGa-s~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 3 KGKVALVTGA-SRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG--SDAIAVRADVANAEDVTNMVKQTVDV 79 (246)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3567886665 45555555531 3789999998 7777666555554433 35888899987631 00
Q ss_pred CCCeeEEEecccc
Q 042544 166 DNSFDAVYAIEAT 178 (305)
Q Consensus 166 ~~~fD~v~~~~~l 178 (305)
-+..|+++.+-..
T Consensus 80 ~g~id~lv~nAg~ 92 (246)
T 2uvd_A 80 FGQVDILVNNAGV 92 (246)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 0368988876543
No 500
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=59.27 E-value=28 Score=28.29 Aligned_cols=69 Identities=12% Similarity=0.056 Sum_probs=44.8
Q ss_pred CeEEEEcCCCCh---HHHHHHhhcCCeEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEEcCCCCCC-----C-----CCCC
Q 042544 102 QKVLDVGCGIGG---PLREIAQFSSTSVTGLNNNEYQITRGKELNRFAGVDKTCNFVKADFMKMP-----F-----PDNS 168 (305)
Q Consensus 102 ~~vLDiGcG~G~---~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~-----~~~~ 168 (305)
++||=-|++.|. .+..|++. +++|+.+|.++..++...+ . ..++.++++|+.+.. + .-+.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~-Ga~V~~~~~~~~~~~~~~~----~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA-GDKVCFIDIDEKRSADFAK----E--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHT----T--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----h--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 577877777663 34444444 8999999999877654332 1 236788999997621 0 0156
Q ss_pred eeEEEeccc
Q 042544 169 FDAVYAIEA 177 (305)
Q Consensus 169 fD~v~~~~~ 177 (305)
.|+++.+-.
T Consensus 76 iDiLVNNAG 84 (247)
T 3ged_A 76 IDVLVNNAC 84 (247)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 898887553
Done!