Query 042555
Match_columns 322
No_of_seqs 504 out of 1252
Neff 12.0
Searched_HMMs 46136
Date Fri Mar 29 07:19:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 5.7E-39 1.2E-43 256.0 23.7 267 22-301 6-294 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 2.4E-38 5.2E-43 250.0 22.8 264 26-303 4-268 (276)
3 PRK03592 haloalkane dehalogena 100.0 1.9E-37 4.1E-42 247.4 23.0 268 23-303 6-291 (295)
4 KOG4178 Soluble epoxide hydrol 100.0 2.1E-36 4.5E-41 228.8 24.1 278 19-301 17-320 (322)
5 PRK00870 haloalkane dehalogena 100.0 1.6E-36 3.5E-41 242.6 23.9 267 19-301 14-301 (302)
6 PLN02679 hydrolase, alpha/beta 100.0 2E-36 4.3E-41 246.3 24.6 269 27-301 64-357 (360)
7 PRK03204 haloalkane dehalogena 100.0 5.4E-35 1.2E-39 231.1 23.8 262 23-299 13-286 (286)
8 TIGR03056 bchO_mg_che_rel puta 100.0 5.1E-35 1.1E-39 232.2 23.6 261 26-299 8-278 (278)
9 PLN02578 hydrolase 100.0 2.5E-34 5.5E-39 233.8 27.5 262 27-299 69-353 (354)
10 PRK10349 carboxylesterase BioH 100.0 4.1E-35 9E-40 229.3 20.5 249 37-300 4-255 (256)
11 PRK06489 hypothetical protein; 100.0 7.8E-35 1.7E-39 237.6 21.7 264 32-302 47-358 (360)
12 PLN03087 BODYGUARD 1 domain co 100.0 4.1E-34 8.8E-39 235.4 25.3 271 25-301 177-479 (481)
13 PLN02385 hydrolase; alpha/beta 100.0 7E-35 1.5E-39 237.2 20.1 264 24-302 61-346 (349)
14 PRK10673 acyl-CoA esterase; Pr 100.0 3.3E-34 7.1E-39 224.5 23.2 249 37-300 3-254 (255)
15 KOG4409 Predicted hydrolase/ac 100.0 4.5E-34 9.7E-39 216.7 22.6 275 21-300 62-363 (365)
16 PLN02965 Probable pheophorbida 100.0 3E-34 6.6E-39 223.9 22.1 238 51-301 5-253 (255)
17 TIGR03611 RutD pyrimidine util 100.0 3.2E-34 6.8E-39 225.1 21.2 253 38-299 2-256 (257)
18 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.1E-33 2.4E-38 224.8 24.4 253 34-299 19-281 (282)
19 PLN03084 alpha/beta hydrolase 100.0 1.3E-33 2.9E-38 228.3 24.9 263 27-300 107-383 (383)
20 TIGR02427 protocat_pcaD 3-oxoa 100.0 8E-34 1.7E-38 221.9 22.9 250 37-299 2-251 (251)
21 PHA02857 monoglyceride lipase; 100.0 3.3E-33 7.2E-38 221.0 25.2 250 28-301 4-273 (276)
22 PLN02298 hydrolase, alpha/beta 100.0 8.1E-33 1.7E-37 223.9 24.6 267 24-305 32-321 (330)
23 TIGR01738 bioH putative pimelo 100.0 2.9E-33 6.2E-38 218.0 20.3 239 49-298 4-245 (245)
24 PRK10749 lysophospholipase L2; 100.0 3.2E-33 6.8E-38 225.4 20.4 265 27-301 33-329 (330)
25 PRK11126 2-succinyl-6-hydroxy- 100.0 5.2E-33 1.1E-37 215.9 20.6 234 49-300 2-241 (242)
26 PRK08775 homoserine O-acetyltr 100.0 4.2E-33 9.2E-38 226.0 20.3 267 23-302 35-340 (343)
27 KOG1454 Predicted hydrolase/ac 100.0 3.2E-33 7E-38 221.1 17.4 278 20-302 21-325 (326)
28 PRK00175 metX homoserine O-ace 100.0 7.2E-32 1.6E-36 220.9 21.5 270 33-303 31-376 (379)
29 PRK07581 hypothetical protein; 100.0 4.5E-32 9.7E-37 220.3 19.9 267 33-301 24-336 (339)
30 PLN02894 hydrolase, alpha/beta 100.0 5.3E-31 1.2E-35 216.5 26.4 266 36-304 93-388 (402)
31 PLN02211 methyl indole-3-aceta 100.0 2.4E-31 5.1E-36 208.3 21.2 251 32-300 4-269 (273)
32 PF12697 Abhydrolase_6: Alpha/ 100.0 1E-32 2.3E-37 212.4 13.2 225 52-293 1-228 (228)
33 TIGR01392 homoserO_Ac_trn homo 100.0 9.2E-32 2E-36 218.9 18.9 265 33-299 14-351 (351)
34 TIGR01250 pro_imino_pep_2 prol 100.0 6.7E-31 1.4E-35 209.7 23.3 268 28-299 6-288 (288)
35 PRK14875 acetoin dehydrogenase 100.0 9.5E-31 2.1E-35 216.0 23.4 252 28-300 113-370 (371)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 1.2E-30 2.5E-35 204.0 21.2 244 49-299 1-251 (251)
37 PLN02652 hydrolase; alpha/beta 100.0 2.5E-29 5.4E-34 204.8 24.8 262 25-303 111-389 (395)
38 PLN02980 2-oxoglutarate decarb 100.0 5.1E-30 1.1E-34 240.6 23.6 280 16-304 1336-1642(1655)
39 KOG1455 Lysophospholipase [Lip 100.0 2.3E-30 5.1E-35 192.9 16.9 261 24-301 27-312 (313)
40 TIGR01249 pro_imino_pep_1 prol 100.0 2.8E-29 6E-34 200.8 23.5 264 25-299 5-303 (306)
41 COG1647 Esterase/lipase [Gener 100.0 1.6E-29 3.4E-34 179.2 18.6 224 48-300 14-243 (243)
42 COG2267 PldB Lysophospholipase 100.0 2.6E-29 5.7E-34 197.1 21.3 269 25-303 10-296 (298)
43 PLN02511 hydrolase 100.0 3.7E-30 8E-35 210.8 14.9 272 21-303 68-367 (388)
44 KOG2984 Predicted hydrolase [G 100.0 1.6E-29 3.5E-34 175.9 13.2 253 22-301 19-276 (277)
45 PRK05855 short chain dehydroge 100.0 1.2E-28 2.7E-33 215.4 20.4 263 31-303 9-294 (582)
46 PRK05077 frsA fermentation/res 100.0 5.9E-27 1.3E-31 192.6 23.8 242 21-301 165-412 (414)
47 PRK06765 homoserine O-acetyltr 100.0 1E-26 2.2E-31 188.7 20.7 265 35-300 41-387 (389)
48 TIGR01607 PST-A Plasmodium sub 100.0 1.4E-26 3E-31 186.1 20.6 256 29-299 2-331 (332)
49 PRK13604 luxD acyl transferase 100.0 3.9E-26 8.4E-31 175.6 21.7 221 25-284 10-247 (307)
50 KOG2382 Predicted alpha/beta h 100.0 2.9E-26 6.4E-31 174.1 20.4 243 45-301 48-313 (315)
51 PRK10985 putative hydrolase; P 99.9 4.2E-26 9.2E-31 183.5 17.0 270 23-301 30-320 (324)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 1.7E-24 3.6E-29 169.9 21.1 243 33-300 10-274 (274)
53 PLN02872 triacylglycerol lipas 99.9 2.4E-24 5.2E-29 174.9 20.8 277 21-304 41-392 (395)
54 PRK10566 esterase; Provisional 99.9 3.6E-23 7.9E-28 161.2 23.1 214 37-301 15-248 (249)
55 PF00561 Abhydrolase_1: alpha/ 99.9 5E-26 1.1E-30 175.5 7.0 216 77-295 1-229 (230)
56 KOG2564 Predicted acetyltransf 99.9 3.9E-25 8.4E-30 162.2 10.5 268 26-304 50-330 (343)
57 PRK11071 esterase YqiA; Provis 99.9 4.1E-23 8.9E-28 152.2 19.4 183 50-299 2-189 (190)
58 TIGR01838 PHA_synth_I poly(R)- 99.9 8.1E-23 1.8E-27 170.4 23.3 233 48-287 187-461 (532)
59 TIGR01836 PHA_synth_III_C poly 99.9 3E-23 6.6E-28 168.9 20.3 262 30-300 43-349 (350)
60 KOG1552 Predicted alpha/beta h 99.9 9.1E-23 2E-27 149.6 18.0 217 23-303 34-254 (258)
61 KOG4391 Predicted alpha/beta h 99.9 8E-23 1.7E-27 144.4 13.0 230 20-304 50-285 (300)
62 COG0596 MhpC Predicted hydrola 99.9 3.4E-21 7.3E-26 152.2 23.1 259 33-299 8-280 (282)
63 PRK07868 acyl-CoA synthetase; 99.9 3.4E-21 7.3E-26 176.0 24.5 251 47-305 65-365 (994)
64 PF12695 Abhydrolase_5: Alpha/ 99.9 9.7E-22 2.1E-26 140.2 14.3 142 51-281 1-145 (145)
65 COG0429 Predicted hydrolase of 99.9 7.9E-22 1.7E-26 149.6 13.9 272 21-300 46-339 (345)
66 COG3208 GrsT Predicted thioest 99.9 3E-20 6.5E-25 135.5 21.6 227 46-300 4-235 (244)
67 PF06342 DUF1057: Alpha/beta h 99.9 5.5E-20 1.2E-24 136.8 21.8 244 38-298 24-296 (297)
68 TIGR03101 hydr2_PEP hydrolase, 99.9 7.3E-21 1.6E-25 146.1 15.0 126 27-152 3-135 (266)
69 COG1506 DAP2 Dipeptidyl aminop 99.9 3.6E-20 7.7E-25 160.6 20.2 238 19-303 360-618 (620)
70 KOG1838 Alpha/beta hydrolase [ 99.9 1.6E-19 3.4E-24 142.4 19.3 278 18-300 87-387 (409)
71 COG2021 MET2 Homoserine acetyl 99.9 5.4E-19 1.2E-23 136.7 21.5 266 33-300 34-367 (368)
72 PF03096 Ndr: Ndr family; Int 99.8 4.5E-19 9.8E-24 133.9 20.1 267 26-301 1-279 (283)
73 PRK11460 putative hydrolase; P 99.8 1.7E-19 3.7E-24 137.6 17.7 174 45-298 12-209 (232)
74 KOG4667 Predicted esterase [Li 99.8 2.9E-19 6.3E-24 126.5 17.2 220 46-300 30-257 (269)
75 KOG2931 Differentiation-relate 99.8 5.8E-18 1.3E-22 125.9 22.9 269 24-302 22-307 (326)
76 PF06500 DUF1100: Alpha/beta h 99.8 3.3E-18 7.1E-23 136.1 20.4 240 19-300 160-408 (411)
77 TIGR02821 fghA_ester_D S-formy 99.8 1.4E-17 3E-22 131.0 21.6 119 33-152 23-174 (275)
78 PF00326 Peptidase_S9: Prolyl 99.8 1E-18 2.2E-23 132.6 14.7 192 66-303 3-211 (213)
79 PLN02442 S-formylglutathione h 99.8 8.6E-18 1.9E-22 132.3 20.3 199 34-283 29-264 (283)
80 PLN00021 chlorophyllase 99.8 5.7E-18 1.2E-22 133.8 17.4 182 34-287 38-246 (313)
81 TIGR01849 PHB_depoly_PhaZ poly 99.8 6.2E-17 1.3E-21 130.2 21.8 248 49-301 102-406 (406)
82 PF05448 AXE1: Acetyl xylan es 99.8 1.9E-16 4.1E-21 125.4 22.1 234 26-301 58-320 (320)
83 TIGR01839 PHA_synth_II poly(R) 99.8 2E-16 4.3E-21 131.0 21.8 225 47-281 213-481 (560)
84 PF02230 Abhydrolase_2: Phosph 99.8 4.8E-17 1E-21 123.3 16.1 178 45-301 10-215 (216)
85 TIGR01840 esterase_phb esteras 99.8 5.7E-17 1.2E-21 122.6 16.2 106 46-152 10-131 (212)
86 PF01738 DLH: Dienelactone hyd 99.8 6.5E-17 1.4E-21 123.1 15.4 177 47-301 12-217 (218)
87 PRK10162 acetyl esterase; Prov 99.7 7E-16 1.5E-20 123.6 21.5 235 24-301 57-315 (318)
88 PF00975 Thioesterase: Thioest 99.7 1.3E-15 2.8E-20 117.2 21.1 220 50-298 1-229 (229)
89 TIGR00976 /NonD putative hydro 99.7 1.4E-16 3E-21 137.2 16.1 125 29-154 1-135 (550)
90 COG0412 Dienelactone hydrolase 99.7 4.1E-15 8.8E-20 113.0 21.9 197 26-302 4-234 (236)
91 PF06821 Ser_hydrolase: Serine 99.7 9.1E-17 2E-21 115.4 12.1 156 52-286 1-158 (171)
92 TIGR03230 lipo_lipase lipoprot 99.7 1.1E-16 2.4E-21 130.3 14.0 108 46-153 38-156 (442)
93 COG2945 Predicted hydrolase of 99.7 1.6E-15 3.4E-20 106.0 16.9 174 45-299 24-205 (210)
94 COG0400 Predicted esterase [Ge 99.7 5.7E-16 1.2E-20 113.7 15.2 176 43-301 12-205 (207)
95 cd00707 Pancreat_lipase_like P 99.7 2.3E-16 5.1E-21 123.1 10.3 124 27-153 17-149 (275)
96 COG3458 Acetyl esterase (deace 99.7 4.7E-15 1E-19 109.3 15.2 237 19-300 49-316 (321)
97 PRK10115 protease 2; Provision 99.7 1.1E-14 2.4E-19 127.5 19.6 217 23-282 415-654 (686)
98 COG4757 Predicted alpha/beta h 99.7 2.2E-15 4.7E-20 108.4 12.4 256 27-298 8-280 (281)
99 PF02273 Acyl_transf_2: Acyl t 99.7 2E-14 4.3E-19 104.5 16.2 219 26-283 4-239 (294)
100 PF05728 UPF0227: Uncharacteri 99.6 4.9E-14 1.1E-18 102.3 18.0 180 52-298 2-186 (187)
101 KOG2565 Predicted hydrolases o 99.6 2E-14 4.4E-19 110.6 15.3 116 33-149 132-262 (469)
102 PF10230 DUF2305: Uncharacteri 99.6 1E-13 2.2E-18 107.6 18.6 105 49-154 2-125 (266)
103 KOG2624 Triglyceride lipase-ch 99.6 8.2E-14 1.8E-18 112.2 18.0 279 21-301 45-398 (403)
104 PF08538 DUF1749: Protein of u 99.6 3.1E-14 6.8E-19 109.0 13.6 232 48-299 32-303 (303)
105 PF12146 Hydrolase_4: Putative 99.6 1.5E-14 3.3E-19 89.3 8.0 77 34-111 1-79 (79)
106 COG3571 Predicted hydrolase of 99.5 2.7E-12 5.9E-17 87.0 16.2 181 48-301 13-211 (213)
107 PF02129 Peptidase_S15: X-Pro 99.5 6.5E-13 1.4E-17 104.5 15.7 122 33-155 1-140 (272)
108 PF12740 Chlorophyllase2: Chlo 99.5 5.1E-13 1.1E-17 100.5 14.2 172 45-287 13-211 (259)
109 PRK10252 entF enterobactin syn 99.5 1.5E-12 3.3E-17 124.4 20.8 101 48-151 1067-1171(1296)
110 TIGR03502 lipase_Pla1_cef extr 99.5 2.1E-13 4.5E-18 118.3 12.9 109 28-137 421-576 (792)
111 COG3545 Predicted esterase of 99.5 6E-12 1.3E-16 87.3 16.8 173 50-300 3-178 (181)
112 PRK05371 x-prolyl-dipeptidyl a 99.5 2.5E-12 5.4E-17 113.6 18.9 225 69-302 271-520 (767)
113 COG3243 PhaC Poly(3-hydroxyalk 99.5 8.6E-13 1.9E-17 104.1 13.0 228 48-285 106-374 (445)
114 PF09752 DUF2048: Uncharacteri 99.5 1.4E-11 3.1E-16 96.0 19.2 235 47-299 90-347 (348)
115 KOG3975 Uncharacterized conser 99.5 2.2E-11 4.9E-16 88.9 18.8 255 37-298 18-300 (301)
116 KOG1515 Arylacetamide deacetyl 99.4 1.2E-10 2.6E-15 92.2 20.9 241 27-301 64-335 (336)
117 PF06028 DUF915: Alpha/beta hy 99.4 7E-12 1.5E-16 95.5 13.5 203 47-299 9-253 (255)
118 PF07224 Chlorophyllase: Chlor 99.4 8.9E-12 1.9E-16 92.0 12.9 104 45-153 42-159 (307)
119 KOG2100 Dipeptidyl aminopeptid 99.4 5.3E-11 1.2E-15 105.0 18.6 230 20-304 494-750 (755)
120 PF07859 Abhydrolase_3: alpha/ 99.4 2.4E-11 5.2E-16 92.2 14.4 94 52-153 1-112 (211)
121 KOG3043 Predicted hydrolase re 99.4 2.6E-11 5.6E-16 87.4 13.2 170 50-300 40-239 (242)
122 PF10503 Esterase_phd: Esteras 99.4 6.1E-11 1.3E-15 88.4 15.7 104 48-152 15-133 (220)
123 PTZ00472 serine carboxypeptida 99.4 1.2E-10 2.6E-15 97.5 18.6 129 25-154 48-219 (462)
124 PF03959 FSH1: Serine hydrolas 99.3 1.6E-11 3.5E-16 92.5 11.1 162 48-286 3-206 (212)
125 COG3319 Thioesterase domains o 99.3 1.5E-10 3.1E-15 88.1 16.2 100 50-152 1-104 (257)
126 PF08840 BAAT_C: BAAT / Acyl-C 99.3 5.3E-12 1.1E-16 94.9 8.2 147 103-282 6-163 (213)
127 PRK04940 hypothetical protein; 99.3 1E-09 2.2E-14 78.2 18.0 170 52-299 2-178 (180)
128 PF07819 PGAP1: PGAP1-like pro 99.3 3.8E-11 8.2E-16 90.8 11.4 103 48-154 3-126 (225)
129 COG0657 Aes Esterase/lipase [L 99.3 2.1E-09 4.6E-14 86.6 21.9 105 46-154 76-194 (312)
130 KOG4627 Kynurenine formamidase 99.2 3E-10 6.6E-15 80.7 12.4 199 38-298 57-268 (270)
131 KOG2551 Phospholipase/carboxyh 99.2 1E-09 2.2E-14 79.3 15.0 174 47-300 3-219 (230)
132 smart00824 PKS_TE Thioesterase 99.2 9.2E-10 2E-14 83.6 15.8 95 54-151 2-102 (212)
133 PF03403 PAF-AH_p_II: Platelet 99.2 4.3E-10 9.2E-15 91.7 13.0 103 47-151 98-262 (379)
134 PF11339 DUF3141: Protein of u 99.2 1E-08 2.2E-13 83.6 20.5 102 47-155 66-179 (581)
135 PF06057 VirJ: Bacterial virul 99.2 3.5E-10 7.6E-15 80.6 10.5 96 51-152 4-108 (192)
136 KOG2112 Lysophospholipase [Lip 99.2 1.3E-09 2.8E-14 78.3 13.2 173 50-300 4-203 (206)
137 COG4099 Predicted peptidase [G 99.1 2.7E-09 5.8E-14 80.5 13.7 119 32-151 169-304 (387)
138 KOG2281 Dipeptidyl aminopeptid 99.1 3.3E-09 7.1E-14 88.1 15.2 225 27-300 616-866 (867)
139 PF05677 DUF818: Chlamydia CHL 99.1 7.5E-08 1.6E-12 74.8 20.7 111 24-138 112-237 (365)
140 COG4188 Predicted dienelactone 99.1 1.6E-09 3.4E-14 85.1 10.0 91 48-139 70-182 (365)
141 PF00450 Peptidase_S10: Serine 99.1 1.6E-08 3.4E-13 85.2 16.6 129 25-154 12-184 (415)
142 KOG3253 Predicted alpha/beta h 99.1 1.1E-08 2.4E-13 84.5 14.8 181 48-305 175-382 (784)
143 KOG1553 Predicted alpha/beta h 99.0 2.9E-09 6.3E-14 81.9 9.5 124 24-150 214-344 (517)
144 PF03583 LIP: Secretory lipase 99.0 1.4E-07 2.9E-12 74.6 19.2 62 238-299 217-283 (290)
145 PF00151 Lipase: Lipase; Inte 99.0 4.8E-10 1E-14 89.5 5.3 108 46-153 68-189 (331)
146 PF12715 Abhydrolase_7: Abhydr 99.0 6.1E-09 1.3E-13 82.5 11.1 126 24-150 88-259 (390)
147 PF01674 Lipase_2: Lipase (cla 99.0 3.6E-10 7.7E-15 84.1 3.7 87 50-137 2-96 (219)
148 PLN02733 phosphatidylcholine-s 99.0 3.2E-09 7E-14 87.7 9.2 90 64-155 108-205 (440)
149 KOG3847 Phospholipase A2 (plat 99.0 1.2E-08 2.7E-13 77.5 11.2 104 46-151 115-275 (399)
150 COG4814 Uncharacterized protei 98.9 3.5E-07 7.5E-12 67.8 17.7 103 49-152 45-177 (288)
151 COG2936 Predicted acyl esteras 98.9 5.1E-08 1.1E-12 81.6 14.5 130 24-153 19-161 (563)
152 PF05990 DUF900: Alpha/beta hy 98.9 2.4E-08 5.3E-13 76.1 11.1 107 47-153 16-139 (233)
153 PRK10439 enterobactin/ferric e 98.8 5.2E-07 1.1E-11 74.7 17.5 105 47-151 207-323 (411)
154 KOG1551 Uncharacterized conser 98.8 2.4E-07 5.1E-12 69.0 13.2 234 47-302 111-367 (371)
155 PF12048 DUF3530: Protein of u 98.8 1.5E-06 3.3E-11 69.2 18.5 128 24-151 62-229 (310)
156 COG3509 LpqC Poly(3-hydroxybut 98.8 7.2E-08 1.6E-12 73.2 10.1 126 24-151 35-179 (312)
157 PF05705 DUF829: Eukaryotic pr 98.8 9.3E-07 2E-11 68.4 16.1 62 237-298 175-240 (240)
158 COG3150 Predicted esterase [Ge 98.8 2E-07 4.4E-12 64.3 10.4 90 52-153 2-93 (191)
159 PF04301 DUF452: Protein of un 98.7 9.1E-07 2E-11 65.3 14.1 190 49-284 11-205 (213)
160 KOG4840 Predicted hydrolases o 98.7 4.2E-07 9.1E-12 65.9 11.7 103 49-154 36-147 (299)
161 PLN03016 sinapoylglucose-malat 98.7 1.1E-05 2.3E-10 67.4 19.7 129 24-153 37-212 (433)
162 PF10340 DUF2424: Protein of u 98.6 1.1E-05 2.3E-10 64.9 18.4 107 47-154 120-238 (374)
163 PLN02606 palmitoyl-protein thi 98.6 4.7E-06 1E-10 64.5 15.8 101 48-152 25-133 (306)
164 PF05057 DUF676: Putative seri 98.6 9.4E-08 2E-12 72.3 6.5 86 48-135 3-97 (217)
165 COG1075 LipA Predicted acetylt 98.6 1.9E-07 4.2E-12 75.3 8.3 103 49-154 59-167 (336)
166 PLN02209 serine carboxypeptida 98.5 6.4E-05 1.4E-09 62.9 20.6 128 25-153 40-214 (437)
167 PF00756 Esterase: Putative es 98.5 4.8E-07 1E-11 70.7 7.4 52 102-153 98-152 (251)
168 COG4782 Uncharacterized protei 98.5 1.1E-06 2.3E-11 69.0 8.9 107 47-153 114-236 (377)
169 COG4553 DepA Poly-beta-hydroxy 98.5 4.3E-05 9.4E-10 58.2 17.0 106 48-154 102-212 (415)
170 KOG1282 Serine carboxypeptidas 98.5 6.4E-05 1.4E-09 62.4 19.4 128 25-154 45-216 (454)
171 PF10142 PhoPQ_related: PhoPQ- 98.4 5.4E-06 1.2E-10 66.8 11.8 151 114-301 170-320 (367)
172 PF05577 Peptidase_S28: Serine 98.4 5.2E-06 1.1E-10 70.2 12.5 117 36-153 15-150 (434)
173 PF08386 Abhydrolase_4: TAP-li 98.4 1.7E-06 3.7E-11 56.8 7.1 60 240-300 34-93 (103)
174 cd00312 Esterase_lipase Estera 98.4 3.8E-06 8.2E-11 72.5 11.3 120 32-152 76-214 (493)
175 COG1770 PtrB Protease II [Amin 98.4 0.00015 3.3E-09 61.8 19.5 130 25-154 420-565 (682)
176 COG1505 Serine proteases of th 98.4 1.3E-05 2.8E-10 67.1 12.8 230 25-300 395-645 (648)
177 COG1073 Hydrolases of the alph 98.3 1.8E-05 3.8E-10 63.5 12.2 68 234-301 225-297 (299)
178 KOG3724 Negative regulator of 98.2 2.3E-05 5E-10 67.6 11.4 102 47-152 87-221 (973)
179 KOG2237 Predicted serine prote 98.2 9.9E-05 2.1E-09 62.5 14.5 131 23-153 440-586 (712)
180 PF11144 DUF2920: Protein of u 98.1 0.00082 1.8E-08 54.6 18.0 37 116-152 184-220 (403)
181 KOG3101 Esterase D [General fu 98.1 2.7E-05 5.8E-10 56.3 7.7 107 46-153 41-178 (283)
182 PLN02633 palmitoyl protein thi 98.1 7.3E-05 1.6E-09 58.2 10.4 102 47-151 23-131 (314)
183 PLN02213 sinapoylglucose-malat 98.0 0.00051 1.1E-08 55.5 15.2 60 240-300 233-316 (319)
184 PF02450 LCAT: Lecithin:choles 97.9 4E-05 8.7E-10 63.5 7.9 83 65-155 66-164 (389)
185 KOG2183 Prolylcarboxypeptidase 97.9 0.00018 3.9E-09 57.7 10.4 101 50-151 81-202 (492)
186 PF04083 Abhydro_lipase: Parti 97.9 5E-05 1.1E-09 44.3 5.3 45 21-66 9-59 (63)
187 COG2272 PnbA Carboxylesterase 97.9 0.00013 2.9E-09 60.2 9.5 119 32-152 77-218 (491)
188 PF00135 COesterase: Carboxyle 97.8 8.5E-05 1.9E-09 65.0 8.7 119 32-151 106-245 (535)
189 COG3946 VirJ Type IV secretory 97.8 0.00058 1.3E-08 54.8 11.9 86 48-139 259-349 (456)
190 KOG2541 Palmitoyl protein thio 97.8 0.00028 6E-09 53.3 9.3 99 50-151 24-128 (296)
191 PF02089 Palm_thioest: Palmito 97.8 5.1E-05 1.1E-09 58.5 5.6 104 47-151 3-116 (279)
192 PF07082 DUF1350: Protein of u 97.8 0.0078 1.7E-07 45.6 16.4 90 51-149 19-123 (250)
193 COG2382 Fes Enterochelin ester 97.7 0.0022 4.8E-08 49.8 13.0 104 47-154 96-215 (299)
194 KOG3967 Uncharacterized conser 97.7 0.0007 1.5E-08 49.3 9.5 105 47-151 99-227 (297)
195 COG0627 Predicted esterase [Ge 97.6 0.0005 1.1E-08 54.8 8.6 108 47-154 52-190 (316)
196 PF06259 Abhydrolase_8: Alpha/ 97.6 0.0036 7.8E-08 45.3 12.0 53 100-152 88-145 (177)
197 COG2819 Predicted hydrolase of 97.6 0.0067 1.4E-07 46.5 13.6 38 114-151 135-172 (264)
198 cd00741 Lipase Lipase. Lipase 97.5 0.00031 6.8E-09 50.2 6.1 50 103-152 11-68 (153)
199 KOG1202 Animal-type fatty acid 97.4 0.0097 2.1E-07 54.8 14.7 97 46-152 2120-2220(2376)
200 PF01764 Lipase_3: Lipase (cla 97.4 0.00063 1.4E-08 47.8 6.1 36 102-137 50-85 (140)
201 PF06441 EHN: Epoxide hydrolas 97.3 0.00077 1.7E-08 44.6 5.6 45 23-69 67-111 (112)
202 COG2939 Carboxypeptidase C (ca 97.2 0.0042 9E-08 51.8 9.5 105 46-151 98-236 (498)
203 KOG2182 Hydrolytic enzymes of 97.2 0.0046 1E-07 51.3 9.5 106 46-153 83-209 (514)
204 PF11187 DUF2974: Protein of u 97.1 0.0015 3.4E-08 49.4 6.3 50 103-153 72-125 (224)
205 COG4287 PqaA PhoPQ-activated p 97.0 0.011 2.3E-07 47.2 10.0 158 111-300 229-386 (507)
206 KOG2521 Uncharacterized conser 97.0 0.12 2.6E-06 41.8 15.8 241 46-305 35-294 (350)
207 COG2830 Uncharacterized protei 96.9 0.041 8.9E-07 38.4 10.9 77 51-151 13-90 (214)
208 PLN02517 phosphatidylcholine-s 96.9 0.0022 4.8E-08 54.7 5.7 85 65-154 157-266 (642)
209 KOG1516 Carboxylesterase and r 96.8 0.014 3.1E-07 51.3 10.6 119 33-151 95-232 (545)
210 cd00519 Lipase_3 Lipase (class 96.8 0.0031 6.7E-08 48.5 5.4 24 114-137 126-149 (229)
211 KOG2369 Lecithin:cholesterol a 96.8 0.0013 2.8E-08 54.1 3.2 84 65-153 125-227 (473)
212 PF11288 DUF3089: Protein of u 96.6 0.0059 1.3E-07 45.2 5.3 69 69-137 38-116 (207)
213 TIGR03712 acc_sec_asp2 accesso 96.6 0.38 8.2E-06 40.5 18.7 114 33-150 274-389 (511)
214 PLN02162 triacylglycerol lipas 96.5 0.0082 1.8E-07 49.9 6.4 35 101-135 263-297 (475)
215 PLN00413 triacylglycerol lipas 96.4 0.011 2.4E-07 49.3 6.5 35 101-135 269-303 (479)
216 PF01083 Cutinase: Cutinase; 96.4 0.011 2.4E-07 43.3 5.8 74 77-152 40-123 (179)
217 PF07519 Tannase: Tannase and 96.3 0.08 1.7E-06 45.4 11.3 117 36-154 16-153 (474)
218 PLN02571 triacylglycerol lipas 96.1 0.01 2.2E-07 48.9 4.8 37 100-136 208-246 (413)
219 PLN02454 triacylglycerol lipas 96.1 0.012 2.5E-07 48.5 5.0 32 105-136 215-248 (414)
220 PF05576 Peptidase_S37: PS-10 96.0 0.018 3.8E-07 47.0 5.6 105 46-152 60-170 (448)
221 PF05277 DUF726: Protein of un 96.0 0.017 3.7E-07 46.7 5.6 41 114-154 218-263 (345)
222 KOG4372 Predicted alpha/beta h 95.9 0.024 5.2E-07 46.1 5.8 88 47-135 78-169 (405)
223 PLN02408 phospholipase A1 95.8 0.018 3.8E-07 46.8 4.8 35 103-137 185-221 (365)
224 KOG1283 Serine carboxypeptidas 95.6 0.11 2.4E-06 40.9 8.1 127 28-154 7-169 (414)
225 PF06850 PHB_depo_C: PHB de-po 95.5 0.029 6.2E-07 40.8 4.5 62 240-301 134-202 (202)
226 PLN02934 triacylglycerol lipas 95.5 0.026 5.6E-07 47.6 4.8 36 101-136 306-341 (515)
227 PLN02310 triacylglycerol lipas 95.5 0.047 1E-06 45.0 6.2 36 101-136 190-229 (405)
228 PLN02324 triacylglycerol lipas 95.3 0.034 7.3E-07 45.9 4.7 34 103-136 200-235 (415)
229 PLN02802 triacylglycerol lipas 95.1 0.04 8.7E-07 46.5 4.7 36 102-137 314-351 (509)
230 PLN02753 triacylglycerol lipas 94.8 0.049 1.1E-06 46.2 4.5 34 103-136 294-332 (531)
231 PLN03037 lipase class 3 family 94.6 0.061 1.3E-06 45.6 4.7 35 102-136 300-338 (525)
232 PLN02719 triacylglycerol lipas 94.6 0.065 1.4E-06 45.4 4.7 34 103-136 280-318 (518)
233 PLN02761 lipase class 3 family 94.5 0.065 1.4E-06 45.5 4.5 35 102-136 274-314 (527)
234 COG4947 Uncharacterized protei 94.2 0.064 1.4E-06 38.0 3.4 44 109-152 94-137 (227)
235 PLN02847 triacylglycerol lipas 93.9 0.12 2.5E-06 44.7 4.9 23 114-136 249-271 (633)
236 KOG4569 Predicted lipase [Lipi 93.6 0.13 2.7E-06 42.1 4.5 37 100-136 155-191 (336)
237 PF09949 DUF2183: Uncharacteri 91.3 2.6 5.6E-05 27.4 7.5 82 65-146 12-97 (100)
238 PF08237 PE-PPE: PE-PPE domain 91.3 1.3 2.8E-05 33.9 7.1 41 97-137 27-69 (225)
239 KOG4540 Putative lipase essent 90.8 0.63 1.4E-05 36.2 4.9 38 110-149 270-307 (425)
240 COG5153 CVT17 Putative lipase 90.8 0.63 1.4E-05 36.2 4.9 38 110-149 270-307 (425)
241 KOG4388 Hormone-sensitive lipa 90.7 0.35 7.5E-06 41.6 3.9 102 47-151 394-508 (880)
242 KOG2029 Uncharacterized conser 90.6 0.44 9.6E-06 41.1 4.4 37 115-151 525-572 (697)
243 KOG2385 Uncharacterized conser 87.2 1.5 3.3E-05 37.3 5.2 44 113-156 444-492 (633)
244 PF07519 Tannase: Tannase and 86.4 1.8 3.9E-05 37.4 5.5 63 240-302 353-428 (474)
245 PRK12467 peptide synthase; Pro 84.9 5.6 0.00012 44.4 9.3 98 48-148 3691-3792(3956)
246 PF03283 PAE: Pectinacetyleste 84.3 3.1 6.8E-05 34.5 5.7 40 115-154 155-198 (361)
247 PF09994 DUF2235: Uncharacteri 80.8 19 0.00042 28.7 8.8 23 114-136 90-112 (277)
248 COG3933 Transcriptional antite 77.3 21 0.00045 30.3 8.0 76 47-133 107-182 (470)
249 PF00698 Acyl_transf_1: Acyl t 76.1 2.2 4.8E-05 34.7 2.4 31 106-136 74-104 (318)
250 PRK10279 hypothetical protein; 76.0 4 8.6E-05 32.9 3.7 33 106-138 23-55 (300)
251 PF05576 Peptidase_S37: PS-10 75.5 4.7 0.0001 33.6 4.0 57 240-299 351-412 (448)
252 smart00827 PKS_AT Acyl transfe 75.3 3.7 7.9E-05 33.0 3.5 31 106-136 72-102 (298)
253 cd07198 Patatin Patatin-like p 75.1 5 0.00011 29.2 3.8 33 106-138 16-48 (172)
254 TIGR03131 malonate_mdcH malona 74.4 4 8.7E-05 32.8 3.5 31 106-136 66-96 (295)
255 cd07225 Pat_PNPLA6_PNPLA7 Pata 74.1 5 0.00011 32.5 3.8 61 65-137 3-64 (306)
256 COG1752 RssA Predicted esteras 72.2 5.2 0.00011 32.4 3.6 33 105-137 28-60 (306)
257 cd07210 Pat_hypo_W_succinogene 70.9 7.6 0.00016 29.7 4.0 31 107-137 19-49 (221)
258 cd07207 Pat_ExoU_VipD_like Exo 70.5 7.1 0.00015 29.0 3.8 31 107-137 18-48 (194)
259 cd07227 Pat_Fungal_NTE1 Fungal 69.7 7.1 0.00015 30.9 3.7 32 106-137 28-59 (269)
260 TIGR00128 fabD malonyl CoA-acy 69.1 5.8 0.00012 31.8 3.2 30 108-137 74-104 (290)
261 cd01714 ETF_beta The electron 68.7 21 0.00045 26.9 5.9 63 77-147 78-145 (202)
262 KOG4389 Acetylcholinesterase/B 67.9 29 0.00064 30.0 6.9 113 35-150 121-254 (601)
263 cd07228 Pat_NTE_like_bacteria 65.5 10 0.00022 27.7 3.7 31 108-138 20-50 (175)
264 cd07209 Pat_hypo_Ecoli_Z1214_l 65.3 10 0.00022 28.9 3.7 33 106-138 16-48 (215)
265 PF11713 Peptidase_C80: Peptid 64.1 5 0.00011 28.7 1.7 44 85-128 62-116 (157)
266 COG3673 Uncharacterized conser 63.9 80 0.0017 25.8 8.2 90 47-136 29-142 (423)
267 COG1576 Uncharacterized conser 63.7 36 0.00078 24.2 5.7 57 67-133 58-115 (155)
268 COG3621 Patatin [General funct 62.1 87 0.0019 25.6 8.3 55 73-138 5-64 (394)
269 cd07230 Pat_TGL4-5_like Triacy 61.5 5.3 0.00011 34.0 1.7 36 107-142 92-127 (421)
270 COG4822 CbiK Cobalamin biosynt 60.8 64 0.0014 24.5 6.8 63 46-121 135-199 (265)
271 PF06309 Torsin: Torsin; Inte 60.6 15 0.00033 25.1 3.4 20 45-64 48-67 (127)
272 COG1448 TyrB Aspartate/tyrosin 60.6 50 0.0011 27.6 6.8 87 49-149 171-263 (396)
273 cd07205 Pat_PNPLA6_PNPLA7_NTE1 60.5 17 0.00036 26.5 4.0 30 108-137 20-49 (175)
274 KOG1252 Cystathionine beta-syn 59.8 67 0.0014 26.4 7.2 52 33-86 192-249 (362)
275 cd07229 Pat_TGL3_like Triacylg 57.7 7.3 0.00016 32.6 1.9 38 107-144 102-139 (391)
276 cd07232 Pat_PLPL Patain-like p 57.1 7.1 0.00015 33.0 1.8 39 106-144 85-123 (407)
277 PF10081 Abhydrolase_9: Alpha/ 57.0 21 0.00046 28.3 4.1 39 116-154 109-150 (289)
278 cd07231 Pat_SDP1-like Sugar-De 56.9 7.4 0.00016 31.5 1.7 36 106-141 86-121 (323)
279 TIGR02816 pfaB_fam PfaB family 55.8 14 0.0003 32.6 3.3 31 107-137 255-286 (538)
280 COG1073 Hydrolases of the alph 55.6 0.43 9.4E-06 38.0 -5.5 89 47-138 47-154 (299)
281 PF10605 3HBOH: 3HB-oligomer h 54.4 13 0.00028 32.9 2.8 37 118-154 287-324 (690)
282 cd07208 Pat_hypo_Ecoli_yjju_li 53.6 22 0.00047 28.1 3.9 33 107-139 17-50 (266)
283 PF12242 Eno-Rase_NADH_b: NAD( 52.2 26 0.00056 21.5 3.0 24 114-137 38-61 (78)
284 cd07224 Pat_like Patatin-like 52.0 25 0.00053 27.2 3.9 33 106-138 17-51 (233)
285 COG2939 Carboxypeptidase C (ca 51.8 22 0.00047 30.7 3.7 59 241-300 426-490 (498)
286 PRK02399 hypothetical protein; 51.4 1.5E+02 0.0033 25.2 8.4 97 53-149 6-130 (406)
287 PF02590 SPOUT_MTase: Predicte 51.4 34 0.00073 24.5 4.1 54 67-128 58-111 (155)
288 PF06792 UPF0261: Uncharacteri 51.3 1.2E+02 0.0026 25.8 7.7 97 51-149 3-128 (403)
289 COG3340 PepE Peptidase E [Amin 50.4 72 0.0016 24.3 5.7 38 47-84 30-70 (224)
290 cd07204 Pat_PNPLA_like Patatin 48.9 31 0.00067 26.9 4.0 20 119-138 34-53 (243)
291 PF08484 Methyltransf_14: C-me 48.7 78 0.0017 22.8 5.7 47 103-149 54-102 (160)
292 PRK00103 rRNA large subunit me 48.4 82 0.0018 22.6 5.7 55 68-130 59-113 (157)
293 PF12641 Flavodoxin_3: Flavodo 48.1 86 0.0019 22.6 5.8 61 240-301 39-99 (160)
294 COG0541 Ffh Signal recognition 46.0 1.1E+02 0.0023 26.3 6.7 64 77-148 183-248 (451)
295 cd07206 Pat_TGL3-4-5_SDP1 Tria 45.3 29 0.00062 28.0 3.3 30 112-141 93-122 (298)
296 KOG3551 Syntrophins (type beta 44.1 27 0.00059 28.9 3.0 59 4-62 431-498 (506)
297 PF14253 AbiH: Bacteriophage a 43.8 26 0.00056 27.7 3.0 15 114-128 233-247 (270)
298 COG0218 Predicted GTPase [Gene 43.8 38 0.00083 25.4 3.5 59 238-300 133-198 (200)
299 PF05577 Peptidase_S28: Serine 42.7 43 0.00092 28.8 4.3 40 241-284 377-416 (434)
300 cd01819 Patatin_and_cPLA2 Pata 42.6 45 0.00098 23.8 3.8 26 109-134 19-46 (155)
301 cd07212 Pat_PNPLA9 Patatin-lik 42.6 48 0.001 27.1 4.3 19 119-137 35-53 (312)
302 PRK06490 glutamine amidotransf 42.3 1.6E+02 0.0036 22.9 7.3 86 48-134 7-103 (239)
303 cd07218 Pat_iPLA2 Calcium-inde 42.0 45 0.00098 26.1 3.9 20 119-138 33-52 (245)
304 cd07221 Pat_PNPLA3 Patatin-lik 40.8 49 0.0011 26.0 4.0 22 117-138 33-54 (252)
305 cd07220 Pat_PNPLA2 Patatin-lik 40.3 47 0.001 26.1 3.8 21 118-138 38-58 (249)
306 PLN03019 carbonic anhydrase 40.2 45 0.00097 27.2 3.7 32 102-133 201-232 (330)
307 PF10686 DUF2493: Protein of u 40.2 54 0.0012 19.8 3.2 12 48-59 30-41 (71)
308 KOG2872 Uroporphyrinogen decar 39.9 83 0.0018 25.2 4.9 68 49-124 252-336 (359)
309 KOG2170 ATPase of the AAA+ sup 37.7 27 0.00058 28.1 2.1 20 45-64 105-124 (344)
310 COG0518 GuaA GMP synthase - Gl 37.4 1.8E+02 0.0039 21.9 6.6 39 96-134 58-96 (198)
311 COG0331 FabD (acyl-carrier-pro 37.1 40 0.00087 27.4 3.0 22 114-135 83-104 (310)
312 PRK05282 (alpha)-aspartyl dipe 36.6 92 0.002 24.2 4.8 86 48-133 30-129 (233)
313 PRK05665 amidotransferase; Pro 36.5 74 0.0016 24.8 4.3 37 98-134 72-108 (240)
314 cd07222 Pat_PNPLA4 Patatin-lik 35.7 56 0.0012 25.5 3.6 17 119-135 34-50 (246)
315 PLN03014 carbonic anhydrase 35.6 60 0.0013 26.7 3.7 32 102-133 206-237 (347)
316 PF03490 Varsurf_PPLC: Variant 35.1 53 0.0011 18.0 2.3 28 96-123 5-32 (51)
317 PLN00416 carbonate dehydratase 35.1 82 0.0018 24.9 4.3 33 102-134 126-158 (258)
318 cd07211 Pat_PNPLA8 Patatin-lik 33.8 52 0.0011 26.7 3.3 17 119-135 44-60 (308)
319 PF03610 EIIA-man: PTS system 33.3 1.5E+02 0.0032 19.8 8.0 74 51-136 2-78 (116)
320 KOG0781 Signal recognition par 33.1 1.9E+02 0.0041 25.4 6.3 63 77-147 467-538 (587)
321 COG3887 Predicted signaling pr 32.3 1.3E+02 0.0028 27.0 5.3 46 103-149 323-376 (655)
322 PF15566 Imm18: Immunity prote 31.6 62 0.0013 18.1 2.2 30 99-128 4-33 (52)
323 COG2230 Cfa Cyclopropane fatty 31.5 1.3E+02 0.0028 24.2 4.9 48 100-148 55-105 (283)
324 TIGR01425 SRP54_euk signal rec 30.8 2.2E+02 0.0047 24.7 6.4 64 76-147 182-247 (429)
325 cd00883 beta_CA_cladeA Carboni 30.6 72 0.0016 23.6 3.3 32 102-133 67-98 (182)
326 PF06289 FlbD: Flagellar prote 30.5 1.1E+02 0.0024 17.8 3.3 32 268-300 26-57 (60)
327 PRK04148 hypothetical protein; 29.9 1E+02 0.0022 21.5 3.6 21 116-136 18-38 (134)
328 PLN02748 tRNA dimethylallyltra 29.8 3.6E+02 0.0078 23.7 7.6 74 47-123 19-119 (468)
329 TIGR00246 tRNA_RlmH_YbeA rRNA 29.4 2.2E+02 0.0047 20.5 5.4 55 67-131 57-111 (153)
330 PF00448 SRP54: SRP54-type pro 29.3 2.5E+02 0.0054 21.1 8.5 70 70-147 76-148 (196)
331 PF00484 Pro_CA: Carbonic anhy 29.3 1.5E+02 0.0032 21.0 4.7 36 99-134 38-73 (153)
332 cd00382 beta_CA Carbonic anhyd 29.3 86 0.0019 21.2 3.3 31 101-131 44-74 (119)
333 TIGR03709 PPK2_rel_1 polyphosp 29.2 1.2E+02 0.0026 24.1 4.4 70 47-128 53-126 (264)
334 TIGR02069 cyanophycinase cyano 29.2 2.7E+02 0.0059 21.9 6.4 52 244-300 2-54 (250)
335 cd07217 Pat17_PNPLA8_PNPLA9_li 28.1 54 0.0012 27.2 2.5 18 119-136 44-61 (344)
336 PLN03006 carbonate dehydratase 27.9 79 0.0017 25.6 3.2 32 102-133 158-189 (301)
337 PRK14974 cell division protein 27.7 3.6E+02 0.0078 22.5 8.3 64 76-147 222-287 (336)
338 KOG1470 Phosphatidylinositol t 27.4 2.7E+02 0.0059 23.0 6.1 21 70-90 142-164 (324)
339 PF01734 Patatin: Patatin-like 27.4 56 0.0012 23.8 2.4 22 116-137 27-48 (204)
340 TIGR02683 upstrm_HI1419 probab 26.5 1.7E+02 0.0038 18.7 4.2 33 23-60 46-78 (95)
341 PRK05368 homoserine O-succinyl 26.2 92 0.002 25.3 3.4 33 104-136 122-154 (302)
342 PF13709 DUF4159: Domain of un 25.9 3E+02 0.0065 20.9 6.0 38 240-278 53-90 (207)
343 cd07213 Pat17_PNPLA8_PNPLA9_li 25.8 62 0.0013 26.0 2.4 19 119-137 37-55 (288)
344 COG4850 Uncharacterized conser 25.4 2.7E+02 0.0058 23.0 5.6 48 103-150 265-314 (373)
345 PRK03363 fixB putative electro 25.2 3.1E+02 0.0067 22.6 6.1 53 77-137 50-103 (313)
346 cd07219 Pat_PNPLA1 Patatin-lik 24.7 1.1E+02 0.0024 25.8 3.6 18 119-136 47-64 (382)
347 TIGR03707 PPK2_P_aer polyphosp 24.3 1.7E+02 0.0036 22.7 4.3 70 48-129 29-102 (230)
348 COG4667 Predicted esterase of 24.2 86 0.0019 24.8 2.7 31 116-146 39-70 (292)
349 COG0159 TrpA Tryptophan syntha 24.1 3.5E+02 0.0077 21.6 6.0 71 49-134 95-167 (265)
350 COG0813 DeoD Purine-nucleoside 24.1 2E+02 0.0044 22.1 4.5 39 114-154 54-96 (236)
351 cd03379 beta_CA_cladeD Carboni 24.0 1.3E+02 0.0027 21.2 3.4 30 101-130 41-70 (142)
352 PLN02925 4-hydroxy-3-methylbut 23.8 2.4E+02 0.0052 26.1 5.6 42 77-123 630-671 (733)
353 TIGR02240 PHA_depoly_arom poly 23.8 3.6E+02 0.0079 21.2 6.9 58 241-301 26-88 (276)
354 PRK14194 bifunctional 5,10-met 23.7 1.4E+02 0.003 24.3 3.9 34 103-136 143-182 (301)
355 PLN02752 [acyl-carrier protein 23.6 79 0.0017 26.2 2.7 18 119-136 127-144 (343)
356 TIGR02883 spore_cwlD N-acetylm 23.5 2.2E+02 0.0047 21.2 4.8 14 79-93 2-15 (189)
357 PF03976 PPK2: Polyphosphate k 23.5 78 0.0017 24.5 2.4 37 49-85 30-68 (228)
358 KOG0780 Signal recognition par 23.4 4.6E+02 0.01 22.5 6.7 67 73-147 179-248 (483)
359 PF10561 UPF0565: Uncharacteri 23.3 1.3E+02 0.0029 24.4 3.8 36 117-152 194-245 (303)
360 COG3946 VirJ Type IV secretory 23.2 4.8E+02 0.01 22.5 6.8 97 51-148 50-154 (456)
361 TIGR03607 patatin-related prot 23.2 1E+02 0.0022 28.7 3.4 22 114-135 64-85 (739)
362 COG1092 Predicted SAM-dependen 22.7 3E+02 0.0065 23.5 5.8 50 76-126 290-339 (393)
363 COG0796 MurI Glutamate racemas 22.4 4.1E+02 0.0089 21.3 9.5 91 47-145 4-98 (269)
364 TIGR02813 omega_3_PfaA polyket 22.4 83 0.0018 34.2 3.1 30 106-135 664-693 (2582)
365 COG0529 CysC Adenylylsulfate k 22.3 1.8E+02 0.0038 21.7 3.8 61 46-108 19-83 (197)
366 cd03131 GATase1_HTS Type 1 glu 21.9 45 0.00098 24.5 0.9 36 102-137 83-118 (175)
367 COG0288 CynT Carbonic anhydras 21.9 93 0.002 23.6 2.6 36 100-135 76-111 (207)
368 PRK07877 hypothetical protein; 21.9 1.7E+02 0.0037 27.3 4.6 39 111-151 103-141 (722)
369 cd00884 beta_CA_cladeB Carboni 21.8 1.3E+02 0.0028 22.5 3.3 33 102-134 73-105 (190)
370 cd05312 NAD_bind_1_malic_enz N 21.7 2E+02 0.0043 23.1 4.4 55 77-133 60-123 (279)
371 COG0351 ThiD Hydroxymethylpyri 21.6 2E+02 0.0044 22.8 4.3 75 51-126 107-182 (263)
372 PF07643 DUF1598: Protein of u 21.6 2.2E+02 0.0048 17.9 4.0 32 105-136 32-63 (84)
373 cd08769 DAP_dppA_2 Peptidase M 21.5 3.9E+02 0.0084 21.5 5.9 53 238-297 145-199 (270)
374 COG0279 GmhA Phosphoheptose is 21.4 1.4E+02 0.0029 21.8 3.1 72 53-128 44-121 (176)
375 cd01014 nicotinamidase_related 21.3 2.7E+02 0.0058 19.8 4.8 48 105-152 89-136 (155)
376 COG4075 Uncharacterized conser 21.0 2.5E+02 0.0054 18.2 3.8 54 67-123 17-72 (110)
377 PRK15219 carbonic anhydrase; P 20.9 79 0.0017 24.7 2.1 31 103-133 130-160 (245)
378 PRK09065 glutamine amidotransf 20.7 1.5E+02 0.0032 23.1 3.5 33 102-134 73-105 (237)
379 PF01118 Semialdhyde_dh: Semia 20.5 1.1E+02 0.0025 20.5 2.6 32 117-149 1-33 (121)
380 PLN02154 carbonic anhydrase 20.1 1.5E+02 0.0033 23.8 3.5 32 102-133 152-183 (290)
381 cd07216 Pat17_PNPLA8_PNPLA9_li 20.0 71 0.0015 26.0 1.8 17 119-135 45-61 (309)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.7e-39 Score=256.01 Aligned_cols=267 Identities=19% Similarity=0.235 Sum_probs=182.6
Q ss_pred CCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC-------
Q 042555 22 AGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR------- 94 (322)
Q Consensus 22 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~------- 94 (322)
...+.++++. +|.+++|...+ .++++|||+||+++++. .|..+++.|+++|+|+++|+||||.|+.+.
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G---~~~~~vlllHG~~~~~~-~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~ 80 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAG---TSGPALVLVHGFGGNAD-HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPN 80 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcC---CCCCeEEEECCCCCChh-HHHHHHHHHHhCCeEEEEcCCCCCCCCCCcccccccc
Confidence 3455677887 88899998873 23589999999999996 699999999988999999999999998653
Q ss_pred CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 95 ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
..++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++............ ............
T Consensus 81 ~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (294)
T PLN02824 81 SFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPW-LGRPFIKAFQNL 159 (294)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccch-hhhHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999997643211100000 000000000000
Q ss_pred ccC-----------CChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhc----ccccCCCCCC
Q 042555 175 LVP-----------QTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILK----DRKFCNLPKI 239 (322)
Q Consensus 175 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~i 239 (322)
+.. .........+...+. ..........+.+....... .....+..+.. ......+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i 233 (294)
T PLN02824 160 LRETAVGKAFFKSVATPETVKNILCQCYH---DDSAVTDELVEAILRPGLEP---GAVDVFLDFISYSGGPLPEELLPAV 233 (294)
T ss_pred HhchhHHHHHHHhhcCHHHHHHHHHHhcc---ChhhccHHHHHHHHhccCCc---hHHHHHHHHhccccccchHHHHhhc
Confidence 000 011111222221111 00111222222111100000 00111111111 0123457789
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
++|+++|+|++|.++|.+..+.+.+.. ++.++++++++||++++|+|+++.+.|.+|++++
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRAYANFD-AVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHHHHhcC-CccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999999999999999999887777 7889999999999999999999999999999763
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.4e-38 Score=250.02 Aligned_cols=264 Identities=20% Similarity=0.231 Sum_probs=179.3
Q ss_pred EEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHH
Q 042555 26 STSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARC 105 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 105 (322)
.+++++ +|.+++|...+ ++.++++|||+||++++.. .|..+++.|.+.|+|+++|+||||.|+.+...+++++++++
T Consensus 4 ~~~~~~-~~~~~~~~~~~-~~~~~~plvllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 4 FRTIDL-DGQSIRTAVRP-GKEGLTPLLIFNGIGANLE-LVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred EEEecc-CCcEEEEEEec-CCCCCCcEEEEeCCCcchH-HHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHH
Confidence 455666 88889998753 2334579999999999997 59999999988899999999999999877667899999999
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHH
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRD 185 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (322)
+.+++++++.++++|+||||||.+++.+|.++|++|+++|+++++.............. ............... .
T Consensus 81 ~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~ 155 (276)
T TIGR02240 81 AARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLM--MMASPRRYIQPSHGI---H 155 (276)
T ss_pred HHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHH--HhcCchhhhcccccc---c
Confidence 99999999999999999999999999999999999999999998764321100000000 000000000000000 0
Q ss_pred HHHhhhcCCCCCCCCCchhHHhhHHHhhhhhh-hhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHH
Q 042555 186 LIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYV-QEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKR 264 (322)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~ 264 (322)
.....+. .. .................... ......... ........+.++++|+++|+|++|+++|++..+++.+
T Consensus 156 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 156 IAPDIYG--GA-FRRDPELAMAHASKVRSGGKLGYYWQLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred hhhhhcc--ce-eeccchhhhhhhhhcccCCCchHHHHHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0000000 00 00000111111111110000 000011111 1111234578899999999999999999999999999
Q ss_pred HhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCC
Q 042555 265 HIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 265 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 303 (322)
.+ ++++++++++ ||++++++|+++++.|.+|+++..+
T Consensus 232 ~~-~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 232 RI-PNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred hC-CCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 99 8999999975 9999999999999999999987654
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.9e-37 Score=247.42 Aligned_cols=268 Identities=15% Similarity=0.138 Sum_probs=177.0
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHH
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQ 102 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~ 102 (322)
+.+..++++ +|.+++|...+ ++++|||+||++++.. .|..+++.|++.++|+++|+||||.|+.+...++.+++
T Consensus 6 ~~~~~~~~~-~g~~i~y~~~G----~g~~vvllHG~~~~~~-~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~ 79 (295)
T PRK03592 6 PGEMRRVEV-LGSRMAYIETG----EGDPIVFLHGNPTSSY-LWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADH 79 (295)
T ss_pred CCcceEEEE-CCEEEEEEEeC----CCCEEEEECCCCCCHH-HHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 345566777 88999999873 4579999999999995 69999999998899999999999999987767899999
Q ss_pred HHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCC--h
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQT--P 180 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 180 (322)
++|+.+++++++.++++++|||+||.+++.+|.++|++|+++|++++........ .+.. ........+.... .
T Consensus 80 a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~ 154 (295)
T PRK03592 80 ARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWD---DFPP--AVRELFQALRSPGEGE 154 (295)
T ss_pred HHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchh---hcch--hHHHHHHHHhCccccc
Confidence 9999999999999999999999999999999999999999999999844321100 0000 0000000000000 0
Q ss_pred HH---HHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-hhhhHHHHHHHH-----------hcccccCCCCCCCCcEEE
Q 042555 181 DK---LRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-YVQEKRELIETI-----------LKDRKFCNLPKIAQQTLI 245 (322)
Q Consensus 181 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~l~~i~~Pvl~ 245 (322)
.. ........+.. .......+.....+....... ............ ...+....+.++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 233 (295)
T PRK03592 155 EMVLEENVFIERVLPG-SILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLL 233 (295)
T ss_pred ccccchhhHHhhcccC-cccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEE
Confidence 00 00011101000 000011111111111110000 000000000000 000122346788999999
Q ss_pred EEeCCCCCCChHHHHHHH-HHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCC
Q 042555 246 IWGEQDQIFPLELGHRLK-RHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 303 (322)
|+|++|.++++....++. +.. +++++++++++||+++.|+|+++++.|.+|+++..+
T Consensus 234 i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 234 INAEPGAILTTGAIRDWCRSWP-NQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred EeccCCcccCcHHHHHHHHHhh-hhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 999999999555554554 455 789999999999999999999999999999987654
No 4
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=228.79 Aligned_cols=278 Identities=19% Similarity=0.268 Sum_probs=191.7
Q ss_pred ecCCCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC--CC
Q 042555 19 FSNAGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT--RA 95 (322)
Q Consensus 19 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~--~~ 95 (322)
......+..+++. +|++++|... +.+.+|.|+++||++... ++|+..+..|+.. |+|+++|+||+|.|+.| ..
T Consensus 17 ~~~~~~~hk~~~~-~gI~~h~~e~--g~~~gP~illlHGfPe~w-yswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~ 92 (322)
T KOG4178|consen 17 LNLSAISHKFVTY-KGIRLHYVEG--GPGDGPIVLLLHGFPESW-YSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHIS 92 (322)
T ss_pred cChhhcceeeEEE-ccEEEEEEee--cCCCCCEEEEEccCCccc-hhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcc
Confidence 3445567788888 7788888887 678899999999999999 6899999999999 99999999999999987 36
Q ss_pred CCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccccc---CCC-Cccccchh
Q 042555 96 DRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEE---GLF-PVTDIDEA 171 (322)
Q Consensus 96 ~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~---~~~-~~~~~~~~ 171 (322)
.|++..++.|+..++++++.++++++||+|||++|+.+|..+|++|+++|+++.+.......... ... .....-.+
T Consensus 93 ~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~f 172 (322)
T KOG4178|consen 93 EYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLF 172 (322)
T ss_pred eeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEec
Confidence 89999999999999999999999999999999999999999999999999999877622110000 000 00000000
Q ss_pred hhcccCC---ChHHHHHHHHhhhcCCCC------------CCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhccc--ccC
Q 042555 172 ANILVPQ---TPDKLRDLIRFSFVNSKP------------VRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDR--KFC 234 (322)
Q Consensus 172 ~~~~~~~---~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 234 (322)
....... .....+......+....+ +.....+..+.+................+.+.+.. ...
T Consensus 173 Q~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 173 QEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred cccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccc
Confidence 0000000 000111111111110001 00111222222222222223333444444444432 256
Q ss_pred CCCCCCCcEEEEEeCCCCCCChH-HHHHHHHHhcCCc-EEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 235 NLPKIAQQTLIIWGEQDQIFPLE-LGHRLKRHIGESA-RLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 235 ~l~~i~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
.+.++.+|+++|+|+.|.+.+.. ....+.+.+ ++. +.++++++||+++.|+|+++.+.|.+|+++.
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~v-p~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDV-PRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhh-ccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 67889999999999999998776 344444555 544 7889999999999999999999999999864
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.6e-36 Score=242.58 Aligned_cols=267 Identities=19% Similarity=0.252 Sum_probs=175.4
Q ss_pred ecCCCceEEEEEeCCc----eEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC
Q 042555 19 FSNAGLRSTSTDLGDG----TVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT 93 (322)
Q Consensus 19 ~~~~~~~~~~i~~~~g----~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~ 93 (322)
....++...++++.++ .+++|... +++.+|+|||+||++++.. .|..+++.|++. |+|+++|+||||.|+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~--G~~~~~~lvliHG~~~~~~-~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~ 90 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDE--GPADGPPVLLLHGEPSWSY-LYRKMIPILAAAGHRVIAPDLIGFGRSDKP 90 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEec--CCCCCCEEEEECCCCCchh-hHHHHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 3445567777888431 67888886 3445789999999999986 699999999865 99999999999999865
Q ss_pred C--CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchh
Q 042555 94 R--ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEA 171 (322)
Q Consensus 94 ~--~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (322)
. ..++++++++++.+++++++.++++++|||+||.+++.+|.++|++|+++|++++............... +...
T Consensus 91 ~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~---~~~~ 167 (302)
T PRK00870 91 TRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWA---WRAF 167 (302)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhh---hhcc
Confidence 3 4589999999999999999999999999999999999999999999999999987543221100000000 0000
Q ss_pred hhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHH-----------hcccccCCCCCCC
Q 042555 172 ANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETI-----------LKDRKFCNLPKIA 240 (322)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~i~ 240 (322)
............+..... ..........+..................+ ........+.+++
T Consensus 168 ---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 239 (302)
T PRK00870 168 ---SQYSPVLPVGRLVNGGTV-----RDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWD 239 (302)
T ss_pred ---cccCchhhHHHHhhcccc-----ccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCC
Confidence 000000000000000000 000000000000000000000000000000 0000123467899
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhcCCcE---EEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIGESAR---LVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+|+++|+|++|.++|... +.+.+.+ ++.+ +.+++++||++++|+|+++++.|.+|++++
T Consensus 240 ~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 240 KPFLTAFSDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CceEEEecCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 999999999999999866 8888888 6665 889999999999999999999999999765
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2e-36 Score=246.28 Aligned_cols=269 Identities=19% Similarity=0.263 Sum_probs=174.6
Q ss_pred EEEEeCCce-EEEEEecCCC--CCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC-CCCCHHHH
Q 042555 27 TSTDLGDGT-VMQCWVPKFP--KILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR-ADRTESFQ 102 (322)
Q Consensus 27 ~~i~~~~g~-~l~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~ 102 (322)
.++.. +|. +++|...+++ ...+|+|||+||++++.. .|..++..|++.|+|+++|+||||.|+.+. ..++++++
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~-~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIP-HWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETW 141 (360)
T ss_pred ceEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHH
Confidence 44555 444 8999887421 014589999999999995 699999999888999999999999998763 46899999
Q ss_pred HHHHHHHHHHhccccEEEEEEchhHHHHHHHHH-hcccccceeeeeccCCCCCccccccCCCC--ccccchhhhcc----
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAA-QFPKVLEKVVLCCSGVCLEENDMEEGLFP--VTDIDEAANIL---- 175 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~lil~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---- 175 (322)
++++.+++++++.++++|+||||||.+++.++. .+|++|+++|++++............... ..........+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999999999999999999999999999999887 47999999999998653321110000000 00000000000
Q ss_pred -------cC-CChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhh-hhhHHHHHHHHhcccccCCCCCCCCcEEEE
Q 042555 176 -------VP-QTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEY-VQEKRELIETILKDRKFCNLPKIAQQTLII 246 (322)
Q Consensus 176 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 246 (322)
.. .....++..+...+. ......+...+.+........ ..............+....+.++++|+|+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYG---NKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhcc---CcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 00 001112222221111 111122222221111111100 011111111000111234567899999999
Q ss_pred EeCCCCCCChHH-----HHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 247 WGEQDQIFPLEL-----GHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 247 ~g~~D~~~~~~~-----~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+|++|.++|.+. .+.+.+.+ +++++++++++||++++|+|+++++.|.+||++.
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999999998763 34566667 8899999999999999999999999999999764
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=5.4e-35 Score=231.07 Aligned_cols=262 Identities=18% Similarity=0.232 Sum_probs=169.8
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC-CCCCHHH
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR-ADRTESF 101 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~ 101 (322)
+++...+++ +|.+++|...+ .+++|||+||++.+.. .|..+++.|.++|+|+++|+||||.|+.+. ..++.++
T Consensus 13 ~~~~~~~~~-~~~~i~y~~~G----~~~~iv~lHG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 86 (286)
T PRK03204 13 PFESRWFDS-SRGRIHYIDEG----TGPPILLCHGNPTWSF-LYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDE 86 (286)
T ss_pred cccceEEEc-CCcEEEEEECC----CCCEEEEECCCCccHH-HHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHH
Confidence 356677888 67789998862 4589999999998874 699999999888999999999999998763 3578999
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPD 181 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (322)
+++++.+++++++.++++++||||||.+++.++..+|++|+++|++++....... .... .+...... ......
T Consensus 87 ~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~-----~~~~~~~~-~~~~~~ 159 (286)
T PRK03204 87 HARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT-LAMK-----AFSRVMSS-PPVQYA 159 (286)
T ss_pred HHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc-hhHH-----HHHHHhcc-ccchhh
Confidence 9999999999999999999999999999999999999999999998765421110 0000 00000000 000000
Q ss_pred HH-HHHH-HhhhcCCCCCCCCCchhHHhhHHHhhhhh-hhhHHHHHHHHhc-----ccccCCCC--CCCCcEEEEEeCCC
Q 042555 182 KL-RDLI-RFSFVNSKPVRGVPSCFLTDFIDVMCTEY-VQEKRELIETILK-----DRKFCNLP--KIAQQTLIIWGEQD 251 (322)
Q Consensus 182 ~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~--~i~~Pvl~i~g~~D 251 (322)
.. .... ...+. ..............+........ ..........+.. ......+. .+++|+++|+|++|
T Consensus 160 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D 238 (286)
T PRK03204 160 ILRRNFFVERLIP-AGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKD 238 (286)
T ss_pred hhhhhHHHHHhcc-ccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCC
Confidence 00 0000 11110 00001111111111110000000 0000000000000 00001111 12899999999999
Q ss_pred CCCChH-HHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 252 QIFPLE-LGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 252 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
.++++. ..+.+.+.+ ++.++++++++||++++|+|+++++.|.+||.
T Consensus 239 ~~~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 239 VAFRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred cccCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 988654 578888888 89999999999999999999999999999973
No 8
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=5.1e-35 Score=232.22 Aligned_cols=261 Identities=20% Similarity=0.177 Sum_probs=176.7
Q ss_pred EEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCC-CCCHHHHHH
Q 042555 26 STSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRA-DRTESFQAR 104 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~ 104 (322)
.+.+++ +|.+++|... +..++|+|||+||++++.. .|..+.+.|++.|+|+++|+||||.|+.+.. .++++.+++
T Consensus 8 ~~~~~~-~~~~~~~~~~--g~~~~~~vv~~hG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 83 (278)
T TIGR03056 8 SRRVTV-GPFHWHVQDM--GPTAGPLLLLLHGTGASTH-SWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAE 83 (278)
T ss_pred cceeeE-CCEEEEEEec--CCCCCCeEEEEcCCCCCHH-HHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHH
Confidence 455666 8898999887 3445789999999999996 6999999998889999999999999987644 689999999
Q ss_pred HHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccc-c-------chhhhccc
Q 042555 105 CVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTD-I-------DEAANILV 176 (322)
Q Consensus 105 ~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~ 176 (322)
++.+++++++.++++++||||||.+++.+|.++|+++++++++++........ ......... . ........
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGM-AGTLFPYMARVLACNPFTPPMMSRGA 162 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccc-cccccchhhHhhhhcccchHHHHhhc
Confidence 99999999998999999999999999999999999999999998765422110 000000000 0 00000000
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-hhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCC
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-YVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFP 255 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~ 255 (322)
.....+...... ............+....... ...........+........++++++|+++|+|++|.++|
T Consensus 163 -~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp 235 (278)
T TIGR03056 163 -ADQQRVERLIRD------TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVP 235 (278)
T ss_pred -ccCcchhHHhhc------cccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccC
Confidence 000001111000 00000100011110000000 0000111111111111234567889999999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 256 LELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
.+..+.+.+.+ +++++++++++||+++.++|+++++.|.+|++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 236 PDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999988 89999999999999999999999999999984
No 9
>PLN02578 hydrolase
Probab=100.00 E-value=2.5e-34 Score=233.83 Aligned_cols=262 Identities=20% Similarity=0.283 Sum_probs=176.9
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCV 106 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 106 (322)
..+.. +|.+++|...+ ++++|||+||++++.. .|..+++.|+++|+|+++|+||||.|+.+...++.+.+++++
T Consensus 69 ~~~~~-~~~~i~Y~~~g----~g~~vvliHG~~~~~~-~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l 142 (354)
T PLN02578 69 NFWTW-RGHKIHYVVQG----EGLPIVLIHGFGASAF-HWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQV 142 (354)
T ss_pred eEEEE-CCEEEEEEEcC----CCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHH
Confidence 33444 68889998762 4578999999999985 699999999888999999999999999887788999999999
Q ss_pred HHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCC---Cccccch-hhhc--------
Q 042555 107 MRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLF---PVTDIDE-AANI-------- 174 (322)
Q Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~-------- 174 (322)
.++++.+..++++++|||+||.+++.+|.++|++|+++|++++.............. ....... ....
T Consensus 143 ~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (354)
T PLN02578 143 ADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRV 222 (354)
T ss_pred HHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHH
Confidence 999999988999999999999999999999999999999998765432211000000 0000000 0000
Q ss_pred ------ccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-hhhhHHHHHHHHh----cccccCCCCCCCCcE
Q 042555 175 ------LVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-YVQEKRELIETIL----KDRKFCNLPKIAQQT 243 (322)
Q Consensus 175 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~l~~i~~Pv 243 (322)
................+. ......+...+......... ........+..+. .......+.++++|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 299 (354)
T PLN02578 223 VLGFLFWQAKQPSRIESVLKSVYK---DKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPL 299 (354)
T ss_pred HHHHHHHHhcCHHHHHHHHHHhcC---CcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCE
Confidence 000011111111111111 11111111111111100000 0111112222211 111234567899999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
++|+|++|.+++.+..+.+.+.+ ++.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 300 LiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 300 LLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999999999 89999999 58999999999999999999985
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=4.1e-35 Score=229.32 Aligned_cols=249 Identities=17% Similarity=0.188 Sum_probs=161.7
Q ss_pred EEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccc
Q 042555 37 MQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVK 116 (322)
Q Consensus 37 l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~ 116 (322)
++|...+ ++.|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.+. .++.+++++++.+ +..+
T Consensus 4 ~~y~~~G---~g~~~ivllHG~~~~~~-~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~~----~~~~ 74 (256)
T PRK10349 4 IWWQTKG---QGNVHLVLLHGWGLNAE-VWRCIDEELSSHFTLHLVDLPGFGRSRGFG-ALSLADMAEAVLQ----QAPD 74 (256)
T ss_pred cchhhcC---CCCCeEEEECCCCCChh-HHHHHHHHHhcCCEEEEecCCCCCCCCCCC-CCCHHHHHHHHHh----cCCC
Confidence 4565552 23357999999999996 699999999888999999999999998653 5677777776553 5678
Q ss_pred cEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKP 196 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (322)
+++++||||||.+++.+|.++|++|+++|++++.............. ..........+..........++..... ..
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 151 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIK-PDVLAGFQQQLSDDFQRTVERFLALQTM--GT 151 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCccc-HHHHHHHHHHHHhchHHHHHHHHHHHHc--cC
Confidence 99999999999999999999999999999998754332110000000 0000000000111111112222111111 00
Q ss_pred CCCCCchhHHhhHHHhhhhh---hhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEE
Q 042555 197 VRGVPSCFLTDFIDVMCTEY---VQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLV 273 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
...... ...+........ ..........+...+....+.++++|+++|+|++|.++|.+..+.+.+.+ ++++++
T Consensus 152 -~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~ 228 (256)
T PRK10349 152 -ETARQD-ARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW-PHSESY 228 (256)
T ss_pred -chHHHH-HHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhC-CCCeEE
Confidence 000111 111111111100 00111111222223345667889999999999999999999999999999 999999
Q ss_pred EEcCCCccccccChHHHHHHHHHHHhc
Q 042555 274 IIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 274 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+++++||++++|+|+.|++.|.+|-.+
T Consensus 229 ~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 229 IFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred EeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 999999999999999999999998643
No 11
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=237.56 Aligned_cols=264 Identities=18% Similarity=0.230 Sum_probs=166.7
Q ss_pred CCceEEEEEecCCCCCC-------CCeEEEEcCCCCchhhcHH--HHHhhh--------cCCceEEeecCCCCCCCCCCC
Q 042555 32 GDGTVMQCWVPKFPKIL-------KPNLLLLHGFGANAMWQYG--EFLRHF--------TPRFNVYVPDLVFFGESYTTR 94 (322)
Q Consensus 32 ~~g~~l~~~~~~~~~~~-------~~~vv~~hG~~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~G~G~s~~~~ 94 (322)
.+|.+++|...+ .+. +|+|||+||++++.. .|. .+.+.| +++|+|+++|+||||.|+.+.
T Consensus 47 ~~g~~i~y~~~G--~~~~~~~~~~gpplvllHG~~~~~~-~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~ 123 (360)
T PRK06489 47 LPELRLHYTTLG--TPHRNADGEIDNAVLVLHGTGGSGK-SFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPS 123 (360)
T ss_pred cCCceEEEEecC--CCCcccccCCCCeEEEeCCCCCchh-hhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCC
Confidence 367889998874 333 789999999999875 464 454444 556999999999999998653
Q ss_pred C-------CCCHHHHHHHHHHHH-HHhccccEE-EEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCc
Q 042555 95 A-------DRTESFQARCVMRLM-EVFCVKRMS-LVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPV 165 (322)
Q Consensus 95 ~-------~~~~~~~~~~~~~~l-~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 165 (322)
. .++++++++++.+++ ++++.++++ ++||||||.+|+.+|.++|++|+++|++++........ ......
T Consensus 124 ~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~--~~~~~~ 201 (360)
T PRK06489 124 DGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGR--NWMWRR 201 (360)
T ss_pred cCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHH--HHHHHH
Confidence 2 478999999988855 889999985 89999999999999999999999999998754211100 000000
Q ss_pred cccchhhh---c---ccCCChHHHHHHHHh----------hhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhc
Q 042555 166 TDIDEAAN---I---LVPQTPDKLRDLIRF----------SFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILK 229 (322)
Q Consensus 166 ~~~~~~~~---~---~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (322)
........ . ............... .+................................+.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (360)
T PRK06489 202 MLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRD 281 (360)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhc
Confidence 00000000 0 000001111111100 0000000000001111111111111111111111222222
Q ss_pred ccccCCCCCCCCcEEEEEeCCCCCCChHHH--HHHHHHhcCCcEEEEEcCC----CccccccChHHHHHHHHHHHhccC
Q 042555 230 DRKFCNLPKIAQQTLIIWGEQDQIFPLELG--HRLKRHIGESARLVIIENT----GHAVNLEKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 230 ~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~i~~fl~~~~ 302 (322)
.+....+.+|++|+|+|+|++|.++|++.. +.+.+.+ +++++++++++ ||.++ ++|+++++.|.+||++..
T Consensus 282 ~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 282 YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 234556789999999999999999998865 7888998 99999999996 99997 899999999999998653
No 12
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=4.1e-34 Score=235.37 Aligned_cols=271 Identities=15% Similarity=0.198 Sum_probs=170.7
Q ss_pred eEEEEEeCCceEEEEEecCCCC-CCCCeEEEEcCCCCchhhcHHH-HHhhhc----CCceEEeecCCCCCCCCCC-CCCC
Q 042555 25 RSTSTDLGDGTVMQCWVPKFPK-ILKPNLLLLHGFGANAMWQYGE-FLRHFT----PRFNVYVPDLVFFGESYTT-RADR 97 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~-~~~~l~----~~~~v~~~d~~G~G~s~~~-~~~~ 97 (322)
...++.+ +|.+++|...++.+ ..+++|||+||++++.. .|.. ++..|. ++|+|+++|+||||.|+.+ ...+
T Consensus 177 ~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~y 254 (481)
T PLN03087 177 CTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLY 254 (481)
T ss_pred eeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcC
Confidence 3455555 66899999976543 33689999999999986 5874 445554 4599999999999999876 3458
Q ss_pred CHHHHHHHHH-HHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccC--CCCccccchhhhc
Q 042555 98 TESFQARCVM-RLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEG--LFPVTDIDEAANI 174 (322)
Q Consensus 98 ~~~~~~~~~~-~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 174 (322)
+++++++++. .++++++.++++++||||||.+++.+|.++|++|+++|+++++........... .............
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 9999999994 899999999999999999999999999999999999999998654332210000 0000000000000
Q ss_pred c-cCCChHHHHHHHHhhhcCCCCCCCCCchhHHh-------------hHHHhhhhhhhhHHHHHHHHhcc-------ccc
Q 042555 175 L-VPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTD-------------FIDVMCTEYVQEKRELIETILKD-------RKF 233 (322)
Q Consensus 175 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 233 (322)
. .......+......... ............ ................+..+... ...
T Consensus 335 ~~~~~~~~~w~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~ 411 (481)
T PLN03087 335 IAFGASVACWYEHISRTIC---LVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLD 411 (481)
T ss_pred cccchhHHHHHHHHHhhhh---cccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHH
Confidence 0 00000000000000000 000000000000 00000000000000000000000 011
Q ss_pred CCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccc-cChHHHHHHHHHHHhcc
Q 042555 234 CNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNL-EKPKELLKHLKSFLIVD 301 (322)
Q Consensus 234 ~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~ 301 (322)
....+|++|+|+|+|++|.++|++..+.+++.+ +++++++++++||++++ ++|+++++.|.+|.+..
T Consensus 412 ~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 412 HVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 122368999999999999999999999999999 99999999999999886 99999999999999653
No 13
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7e-35 Score=237.17 Aligned_cols=264 Identities=16% Similarity=0.168 Sum_probs=174.4
Q ss_pred ceEEEEEeCCceEEEEEecCCCC-CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCC-CCCHH
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPK-ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRA-DRTES 100 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~ 100 (322)
.++.++..++|.+++|..+.|.+ ..+++|||+||++++....|..++..|++. |+|+++|+||||.|+.+.. ..+++
T Consensus 61 ~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 140 (349)
T PLN02385 61 TEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFD 140 (349)
T ss_pred eeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHH
Confidence 44556666899999998886533 456799999999988654468899999875 9999999999999986533 35889
Q ss_pred HHHHHHHHHHHHhcc------ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 101 FQARCVMRLMEVFCV------KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
++++|+.++++.+.. .+++|+||||||.+++.++.++|++++++|+++|............ ........
T Consensus 141 ~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~-----~~~~~~~~ 215 (349)
T PLN02385 141 DLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP-----LVLQILIL 215 (349)
T ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch-----HHHHHHHH
Confidence 999999999988753 3799999999999999999999999999999998654321100000 00000000
Q ss_pred ccCCChHHHHHHHHhh-hcCCCC--CCCCCchhHHhhHHH---hhh--hhhhhHHHHHHHHhcccccCCCCCCCCcEEEE
Q 042555 175 LVPQTPDKLRDLIRFS-FVNSKP--VRGVPSCFLTDFIDV---MCT--EYVQEKRELIETILKDRKFCNLPKIAQQTLII 246 (322)
Q Consensus 175 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 246 (322)
+....... ...... ............... ... .........+... .+....+.++++|+|+|
T Consensus 216 --------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~i~~P~Lii 285 (349)
T PLN02385 216 --------LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT--QEIEMQLEEVSLPLLIL 285 (349)
T ss_pred --------HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH--HHHHHhcccCCCCEEEE
Confidence 00000000 000000 000000000000000 000 0000111111111 11334577899999999
Q ss_pred EeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccccChHH----HHHHHHHHHhccC
Q 042555 247 WGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPKE----LLKHLKSFLIVDS 302 (322)
Q Consensus 247 ~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~~~~ 302 (322)
+|++|.++|++..+.+++.+. +++++++++++||+++.++|++ +.+.|.+||+++.
T Consensus 286 ~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 286 HGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999999998873 4689999999999999999876 8888999998764
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=3.3e-34 Score=224.50 Aligned_cols=249 Identities=16% Similarity=0.198 Sum_probs=167.6
Q ss_pred EEEEecC-CCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcc
Q 042555 37 MQCWVPK-FPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCV 115 (322)
Q Consensus 37 l~~~~~~-~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~ 115 (322)
++|.... .+.+++|+|||+||++++.. .|..++..|+++|+|+++|+||||.|..+ ..++++++++|+.+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~s~~~-~~~~~~~~~~d~~~~l~~l~~ 80 (255)
T PRK10673 3 LNIRAQTAQNPHNNSPIVLVHGLFGSLD-NLGVLARDLVNDHDIIQVDMRNHGLSPRD-PVMNYPAMAQDLLDTLDALQI 80 (255)
T ss_pred ceeeeccCCCCCCCCCEEEECCCCCchh-HHHHHHHHHhhCCeEEEECCCCCCCCCCC-CCCCHHHHHHHHHHHHHHcCC
Confidence 4555532 23467889999999999996 69999999988899999999999999865 457999999999999999999
Q ss_pred ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCC
Q 042555 116 KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSK 195 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (322)
++++++||||||.+++.+|.++|++|+++|++++.+............. ....... ............+....
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~---- 153 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFA--AINAVSE-AGATTRQQAAAIMRQHL---- 153 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHH--HHHHhhh-cccccHHHHHHHHHHhc----
Confidence 9999999999999999999999999999999976432211000000000 0000000 00000000001100000
Q ss_pred CCCCCCchhHHhhHHHhhhhh--hhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEE
Q 042555 196 PVRGVPSCFLTDFIDVMCTEY--VQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLV 273 (322)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
.......+........ ...................+..+++|+++|+|++|..++.+..+.+.+.+ ++++++
T Consensus 154 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~ 227 (255)
T PRK10673 154 -----NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF-PQARAH 227 (255)
T ss_pred -----CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEE
Confidence 0000000000000000 00000011111111123456788999999999999999999999999999 899999
Q ss_pred EEcCCCccccccChHHHHHHHHHHHhc
Q 042555 274 IIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 274 ~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+++++||++++++|+++++.|.+||++
T Consensus 228 ~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 228 VIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999975
No 15
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=4.5e-34 Score=216.67 Aligned_cols=275 Identities=19% Similarity=0.260 Sum_probs=178.1
Q ss_pred CCCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC----CC
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR----AD 96 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~----~~ 96 (322)
......+.+.++++..+...........++++|++||+|++... |..-++.|++.++|+++|++|+|.|+.|. ..
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~g~-f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~ 140 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGLGL-FFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPT 140 (365)
T ss_pred CCCcceeeeecCCCceeEEEeecccccCCCcEEEEeccchhHHH-HHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcc
Confidence 34456677888777777666665556778899999999999974 99999999999999999999999999873 23
Q ss_pred CCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccc-ccCCCCcccc-------
Q 042555 97 RTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDM-EEGLFPVTDI------- 168 (322)
Q Consensus 97 ~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~------- 168 (322)
.....+++.+.++....++++.+|+|||+||+++..||.+||++|+.|||++|......... .........+
T Consensus 141 ~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~ 220 (365)
T KOG4409|consen 141 TAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLV 220 (365)
T ss_pred cchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhh
Confidence 34557899999999999999999999999999999999999999999999999876653310 1111111111
Q ss_pred ------chhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcc------cccCCC
Q 042555 169 ------DEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKD------RKFCNL 236 (322)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l 236 (322)
....+.+.+..+....++....+. .-+....+.+..++.-....... .....+..+... .....+
T Consensus 221 ~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~--k~~~~~~ed~l~~YiY~~n~~~p-sgE~~fk~l~~~~g~Ar~Pm~~r~ 297 (365)
T KOG4409|consen 221 ATNFNPLALLRLMGPLGPKLVSRLRPDRFR--KFPSLIEEDFLHEYIYHCNAQNP-SGETAFKNLFEPGGWARRPMIQRL 297 (365)
T ss_pred hhcCCHHHHHHhccccchHHHhhhhHHHHH--hccccchhHHHHHHHHHhcCCCC-cHHHHHHHHHhccchhhhhHHHHH
Confidence 111122222222222222221111 00011122221222111111111 111111111111 122223
Q ss_pred CCC--CCcEEEEEeCCCCCCChHHHHHHHHH-hcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 237 PKI--AQQTLIIWGEQDQIFPLELGHRLKRH-IGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 237 ~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
..+ +||+++|+|++|.+-. ....++.+. ....++.++++++||.+++++|+.|++.|.++++.
T Consensus 298 ~~l~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 298 RELKKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred HhhccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 333 5999999999997644 444444443 22558999999999999999999999999999875
No 16
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=3e-34 Score=223.85 Aligned_cols=238 Identities=15% Similarity=0.148 Sum_probs=158.4
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcC-CceEEeecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhcc-ccEEEEEEchhH
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTP-RFNVYVPDLVFFGESYTTR-ADRTESFQARCVMRLMEVFCV-KRMSLVGISYGG 127 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l~~l~~-~~~~lvGhS~Gg 127 (322)
+|||+||++.+.. .|..+++.|.+ +|+|+++|+||||.|+.+. ..++.+++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~-~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAW-CWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcC-cHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 5999999999885 69999999955 4999999999999998653 468899999999999999987 599999999999
Q ss_pred HHHHHHHHhcccccceeeeeccCCCCCccccccCCCC-ccccchhhhc----ccCCCh--HHHH-HHHHhhhcCCCCCCC
Q 042555 128 FVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFP-VTDIDEAANI----LVPQTP--DKLR-DLIRFSFVNSKPVRG 199 (322)
Q Consensus 128 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~--~~~~-~~~~~~~~~~~~~~~ 199 (322)
.+++.+|.++|++|+++|++++............... .......... ...... .... ......+.. .
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--- 158 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN--Q--- 158 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhc--C---
Confidence 9999999999999999999998642111000000000 0000000000 000000 0000 011111110 0
Q ss_pred CCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q 042555 200 VPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTG 279 (322)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (322)
.+.................. ..... .....+..+++|+++|+|++|.++|++..+.+.+.+ +++++++++++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~G 231 (255)
T PLN02965 159 SPLEDYTLSSKLLRPAPVRA----FQDLD--KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW-PPAQTYVLEDSD 231 (255)
T ss_pred CCHHHHHHHHHhcCCCCCcc----hhhhh--hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC-CcceEEEecCCC
Confidence 00000000000000000000 00000 012245578999999999999999999999999999 999999999999
Q ss_pred ccccccChHHHHHHHHHHHhcc
Q 042555 280 HAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 280 H~~~~~~~~~~~~~i~~fl~~~ 301 (322)
|++++|+|+++++.|.+|+++.
T Consensus 232 H~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 232 HSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999998754
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=3.2e-34 Score=225.11 Aligned_cols=253 Identities=20% Similarity=0.269 Sum_probs=169.2
Q ss_pred EEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhccc
Q 042555 38 QCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTT-RADRTESFQARCVMRLMEVFCVK 116 (322)
Q Consensus 38 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~l~~~ 116 (322)
+|...++.+.++|+|||+||+++++. .|..++..|.++|+|+++|+||||.|..+ ...++.+++++++.+++++++.+
T Consensus 2 ~~~~~~~~~~~~~~iv~lhG~~~~~~-~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~ 80 (257)
T TIGR03611 2 HYELHGPPDADAPVVVLSSGLGGSGS-YWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE 80 (257)
T ss_pred EEEEecCCCCCCCEEEEEcCCCcchh-HHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 56666443456789999999999996 59999999988899999999999999865 45689999999999999999999
Q ss_pred cEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKP 196 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (322)
+++++|||+||.+++.+|.++|++|+++|++++........ .... ......+.....................
T Consensus 81 ~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T TIGR03611 81 RFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHT-RRCF------DVRIALLQHAGPEAYVHAQALFLYPADW 153 (257)
T ss_pred cEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhH-HHHH------HHHHHHHhccCcchhhhhhhhhhccccH
Confidence 99999999999999999999999999999998754332110 0000 0000000000000000000000000000
Q ss_pred CCCCCchhHHhhHHHhhh-hhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEE
Q 042555 197 VRGVPSCFLTDFIDVMCT-EYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVII 275 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 275 (322)
.................. ............+...+....+.++++|+++++|++|.++|++..+++.+.+ ++.+++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~ 232 (257)
T TIGR03611 154 ISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLL 232 (257)
T ss_pred hhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhc-CCceEEEE
Confidence 000000000000000000 0001111112222222344567788999999999999999999999999998 89999999
Q ss_pred cCCCccccccChHHHHHHHHHHHh
Q 042555 276 ENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 276 ~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
+++||++++++|+++.+.|.+||+
T Consensus 233 ~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 233 PYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred CCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999999999999999986
No 18
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.1e-33 Score=224.80 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=162.3
Q ss_pred ceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHH---HhhhcC-CceEEeecCCCCCCCCCCCC-CCCHHHHHHHHHH
Q 042555 34 GTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEF---LRHFTP-RFNVYVPDLVFFGESYTTRA-DRTESFQARCVMR 108 (322)
Q Consensus 34 g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~---~~~l~~-~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~ 108 (322)
|.+++|... +++|+|||+||++++.. .|..+ +..+.+ .|+|+++|+||||.|+.+.. ......+++++.+
T Consensus 19 ~~~~~y~~~----g~~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~ 93 (282)
T TIGR03343 19 NFRIHYNEA----GNGEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG 93 (282)
T ss_pred ceeEEEEec----CCCCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHH
Confidence 466888775 24578999999988774 46532 344544 49999999999999986532 2222256899999
Q ss_pred HHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHH
Q 042555 109 LMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIR 188 (322)
Q Consensus 109 ~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (322)
+++.++.++++++||||||.+++.+|.++|++|+++|++++....... ... ..........................
T Consensus 94 ~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (282)
T TIGR03343 94 LMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSL--FAP-MPMEGIKLLFKLYAEPSYETLKQMLN 170 (282)
T ss_pred HHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccc--ccc-CchHHHHHHHHHhcCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999875321110 000 00000001111111111112222221
Q ss_pred hhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHH-----HhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHH
Q 042555 189 FSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIET-----ILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLK 263 (322)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 263 (322)
.... .+ ........+......... .......... ....+....+.++++|+++++|++|.+++++..++++
T Consensus 171 ~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~ 246 (282)
T TIGR03343 171 VFLF--DQ-SLITEELLQGRWENIQRQ-PEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLL 246 (282)
T ss_pred hCcc--Cc-ccCcHHHHHhHHHHhhcC-HHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHH
Confidence 1111 11 111111111111101000 0000111110 0011123356789999999999999999999999999
Q ss_pred HHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 264 RHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 264 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
+.+ +++++++++++||+++.|+|+.+.+.|.+|+.
T Consensus 247 ~~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 247 WNM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HhC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 999 99999999999999999999999999999985
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=228.26 Aligned_cols=263 Identities=17% Similarity=0.176 Sum_probs=172.2
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCC----CCCHHHH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRA----DRTESFQ 102 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~----~~~~~~~ 102 (322)
......+|.+++|...+ ++.+++|||+||++++.. .|+.++..|++.|+|+++|+||||.|+.+.. .++++++
T Consensus 107 ~~~~~~~~~~~~y~~~G--~~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 107 QSQASSDLFRWFCVESG--SNNNPPVLLIHGFPSQAY-SYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred eeEEcCCceEEEEEecC--CCCCCeEEEECCCCCCHH-HHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 33444689999999873 445789999999999985 6999999998889999999999999987643 5899999
Q ss_pred HHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHH
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDK 182 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (322)
++++.+++++++.++++|+|||+||.+++.+|.++|++|+++|+++++................ ......+.....
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~--~~l~~~~~~~~~-- 259 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFS--NFLLGEIFSQDP-- 259 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHH--HHHhhhhhhcch--
Confidence 9999999999999999999999999999999999999999999999875322100000000000 000000000000
Q ss_pred HHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhh--hhhHHHHHHHHhcc------cccC--CCCCCCCcEEEEEeCCCC
Q 042555 183 LRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEY--VQEKRELIETILKD------RKFC--NLPKIAQQTLIIWGEQDQ 252 (322)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------~~~~--~l~~i~~Pvl~i~g~~D~ 252 (322)
... ....+....+ ..........+........ ..........+... .... ...++++|+++|+|++|.
T Consensus 260 ~~~-~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~ 337 (383)
T PLN03084 260 LRA-SDKALTSCGP-YAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDR 337 (383)
T ss_pred HHH-HhhhhcccCc-cCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCC
Confidence 000 0000000000 0011111111111000000 00000011111000 0000 113679999999999999
Q ss_pred CCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 253 IFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+++.+..+.+++. .+.++++++++||++++|+|+++++.|.+|+.+
T Consensus 338 ~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 338 WLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred CcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 9999988888876 478999999999999999999999999999863
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=8e-34 Score=221.94 Aligned_cols=250 Identities=21% Similarity=0.238 Sum_probs=171.1
Q ss_pred EEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccc
Q 042555 37 MQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVK 116 (322)
Q Consensus 37 l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~ 116 (322)
++|...++ ++++|+|||+||++++.. .|..+++.|.++|+|+++|+||||.|+.+...++.+++++++.++++.++.+
T Consensus 2 ~~~~~~g~-~~~~~~li~~hg~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~ 79 (251)
T TIGR02427 2 LHYRLDGA-ADGAPVLVFINSLGTDLR-MWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIE 79 (251)
T ss_pred ceEEeecC-CCCCCeEEEEcCcccchh-hHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 56666532 225689999999999986 5999999998889999999999999987767789999999999999999989
Q ss_pred cEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKP 196 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (322)
+++++|||+||.+++.+|.++|++|++++++++.......... .. .....................+. ..
T Consensus 80 ~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~ 149 (251)
T TIGR02427 80 RAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESW---NA-----RIAAVRAEGLAALADAVLERWFT--PG 149 (251)
T ss_pred ceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhH---HH-----HHhhhhhccHHHHHHHHHHHHcc--cc
Confidence 9999999999999999999999999999999875432211000 00 00000000000001111111111 00
Q ss_pred CCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q 042555 197 VRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIE 276 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (322)
...........+..................+...+....+.++++|+++++|++|.++|.+..+.+.+.+ ++.++++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (251)
T TIGR02427 150 FREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLV-PGARFAEIR 228 (251)
T ss_pred cccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhC-CCceEEEEC
Confidence 0000111111111111111111111122222222234556788999999999999999999999999998 889999999
Q ss_pred CCCccccccChHHHHHHHHHHHh
Q 042555 277 NTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 277 ~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
++||++++++|+++.+.|.+|++
T Consensus 229 ~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 229 GAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999999999984
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=3.3e-33 Score=221.03 Aligned_cols=250 Identities=17% Similarity=0.177 Sum_probs=166.8
Q ss_pred EEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC-CCCCHHHHHHH
Q 042555 28 STDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR-ADRTESFQARC 105 (322)
Q Consensus 28 ~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~ 105 (322)
++..+||.+++|+.+.|+...++.|+++||+++++. .|..+++.|.+. |+|+++|+||||.|+... ...++..+++|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~-~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSG-RYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccc-hHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 345569999999988765555667777799999986 699999999886 999999999999997642 23466667777
Q ss_pred HHHHHHHh----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChH
Q 042555 106 VMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPD 181 (322)
Q Consensus 106 ~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (322)
+.+.++.+ ...+++++|||+||.+++.+|.++|++++++|+++|......... ..
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~---------------------~~ 141 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPR---------------------LN 141 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccH---------------------HH
Confidence 77777654 346899999999999999999999999999999998653211000 00
Q ss_pred HHHHHHHhhhcCCCCCCCC-CchhH---HhhHHHhhhh-------hhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCC
Q 042555 182 KLRDLIRFSFVNSKPVRGV-PSCFL---TDFIDVMCTE-------YVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQ 250 (322)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~ 250 (322)
.+.......+......... +.... .......... .......... . .......+.++++|+++++|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~i~~Pvliv~G~~ 219 (276)
T PHA02857 142 LLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLK-A-TNKVRKIIPKIKTPILILQGTN 219 (276)
T ss_pred HHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHH-H-HHHHHHhcccCCCCEEEEecCC
Confidence 0000000000000000000 00000 0000000000 0000001100 0 0112345778999999999999
Q ss_pred CCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccCh---HHHHHHHHHHHhcc
Q 042555 251 DQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKP---KELLKHLKSFLIVD 301 (322)
Q Consensus 251 D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 301 (322)
|.++|++..+++.+.+.+++++++++++||.++.|.+ +++.+.+.+||.++
T Consensus 220 D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 220 NEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 9999999999999987457899999999999998865 57899999999875
No 22
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.1e-33 Score=223.95 Aligned_cols=267 Identities=12% Similarity=0.107 Sum_probs=172.9
Q ss_pred ceEEEEEeCCceEEEEEecCCCC--CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC-CCCCH
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPK--ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR-ADRTE 99 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~ 99 (322)
.+..+++..||.+++|+.+.+.+ +.+++|||+||++.+..+.|..+...|.+. |+|+++|+||||.|+... ...+.
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~ 111 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNV 111 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCH
Confidence 34567777899999998765432 345679999999876544577778888876 999999999999997542 24578
Q ss_pred HHHHHHHHHHHHHhcc------ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhh
Q 042555 100 SFQARCVMRLMEVFCV------KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAAN 173 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~~------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (322)
+.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++........ ... ........
T Consensus 112 ~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~----~~~~~~~~ 186 (330)
T PLN02298 112 DLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKI-RPP----WPIPQILT 186 (330)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCccc-CCc----hHHHHHHH
Confidence 8999999999998743 379999999999999999999999999999999865432210 000 00000000
Q ss_pred cccCCChHHHHHHHHhhhcCCCC--C-CCCCchhHHhhHHH----hh-hhhhhhHHHHHHHHhcccccCCCCCCCCcEEE
Q 042555 174 ILVPQTPDKLRDLIRFSFVNSKP--V-RGVPSCFLTDFIDV----MC-TEYVQEKRELIETILKDRKFCNLPKIAQQTLI 245 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 245 (322)
............... . .............. .. ............... .....+.++++|+|+
T Consensus 187 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~i~~PvLi 256 (330)
T PLN02298 187 --------FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD--YLGKKLKDVSIPFIV 256 (330)
T ss_pred --------HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH--HHHHhhhhcCCCEEE
Confidence 000000000000000 0 00000000000000 00 000000111111100 123457788999999
Q ss_pred EEeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccccChH----HHHHHHHHHHhccCCCc
Q 042555 246 IWGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPK----ELLKHLKSFLIVDSSLS 305 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~----~~~~~i~~fl~~~~~~~ 305 (322)
++|++|.++|++..+.+++.++ ++++++++++++|.++.++|+ .+.+.|.+||.+.....
T Consensus 257 i~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 257 LHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred EecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999988873 478999999999999998875 47788899998876443
No 23
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=2.9e-33 Score=218.03 Aligned_cols=239 Identities=18% Similarity=0.202 Sum_probs=155.9
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGF 128 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ 128 (322)
.|+|||+||++++.. .|..+++.|.+.|+|+++|+||||.|... ..++++++++++.+.+ .++++++||||||.
T Consensus 4 ~~~iv~~HG~~~~~~-~~~~~~~~l~~~~~vi~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~ 77 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE-VFRCLDEELSAHFTLHLVDLPGHGRSRGF-GPLSLADAAEAIAAQA----PDPAIWLGWSLGGL 77 (245)
T ss_pred CceEEEEcCCCCchh-hHHHHHHhhccCeEEEEecCCcCccCCCC-CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHH
Confidence 378999999999996 69999999988899999999999998754 3467777777766543 37899999999999
Q ss_pred HHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhh
Q 042555 129 VGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDF 208 (322)
Q Consensus 129 ~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (322)
+++.+|.++|++++++|++++.....................+...+..........+...... .. . .........
T Consensus 78 ~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~~~ 153 (245)
T TIGR01738 78 VALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTL--GT-P-TARQDARAL 153 (245)
T ss_pred HHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh--cC-C-ccchHHHHH
Confidence 9999999999999999999876543211100000000000001111110011111111111111 00 0 011111111
Q ss_pred HHHhhh---hhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcccccc
Q 042555 209 IDVMCT---EYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLE 285 (322)
Q Consensus 209 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 285 (322)
...... .........+..+...+....+.++++|+++++|++|.++|.+..+.+.+.+ +++++++++++||+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLS 232 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCcccc
Confidence 111110 0011112222222222234456789999999999999999999999999988 899999999999999999
Q ss_pred ChHHHHHHHHHHH
Q 042555 286 KPKELLKHLKSFL 298 (322)
Q Consensus 286 ~~~~~~~~i~~fl 298 (322)
+|+++++.|.+|+
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 9999999999986
No 24
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=3.2e-33 Score=225.41 Aligned_cols=265 Identities=13% Similarity=0.114 Sum_probs=167.5
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCC------CCCH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRA------DRTE 99 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~------~~~~ 99 (322)
.++...+|.+++|..+++. ..+++||++||++++.. .|..++..|.+. |+|+++|+||||.|+.+.. ..++
T Consensus 33 ~~~~~~~g~~l~~~~~~~~-~~~~~vll~HG~~~~~~-~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 110 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRAP-HHDRVVVICPGRIESYV-KYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERF 110 (330)
T ss_pred eEEEcCCCCEEEEEEccCC-CCCcEEEEECCccchHH-HHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccH
Confidence 4444558999999998543 45579999999999886 588898877665 9999999999999975421 2578
Q ss_pred HHHHHHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcc
Q 042555 100 SFQARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANIL 175 (322)
Q Consensus 100 ~~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (322)
+++++|+.++++.+ +..+++++||||||.+++.+|.++|++++++|+++|........ ... .........
T Consensus 111 ~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~--~~~----~~~~~~~~~ 184 (330)
T PRK10749 111 NDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL--PSW----MARRILNWA 184 (330)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC--CcH----HHHHHHHHH
Confidence 99999999999887 56799999999999999999999999999999998865322110 000 000000000
Q ss_pred cCCChHHHHHHHHhhhcCCCCCC------CCCchhHHhhHHHhhhhhh----hhHHHHH-HHHhc-ccccCCCCCCCCcE
Q 042555 176 VPQTPDKLRDLIRFSFVNSKPVR------GVPSCFLTDFIDVMCTEYV----QEKRELI-ETILK-DRKFCNLPKIAQQT 243 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~-~~~~~~l~~i~~Pv 243 (322)
... . ................. ...........+....... ....... ..+.. ......+.++++|+
T Consensus 185 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~ 262 (330)
T PRK10749 185 EGH-P-RIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPL 262 (330)
T ss_pred HHh-c-CCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCE
Confidence 000 0 00000000000000000 0000011111111110000 0000000 01000 01234567889999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhc------CCcEEEEEcCCCccccccCh---HHHHHHHHHHHhcc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIG------ESARLVIIENTGHAVNLEKP---KELLKHLKSFLIVD 301 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~---~~~~~~i~~fl~~~ 301 (322)
|+|+|++|.+++++..+.+++.+. +++++++++|+||.++.|.+ +.+.+.|.+||+++
T Consensus 263 Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 263 LLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 999999999999999998888762 34589999999999998875 66889999999865
No 25
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=5.2e-33 Score=215.92 Aligned_cols=234 Identities=17% Similarity=0.164 Sum_probs=151.1
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGF 128 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ 128 (322)
+|+|||+||++++.. .|..+++.|. +|+|+++|+||||.|+.+.. .+++++++++.+++++++.++++++||||||.
T Consensus 2 ~p~vvllHG~~~~~~-~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ-DWQPVGEALP-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNILPYWLVGYSLGGR 78 (242)
T ss_pred CCEEEEECCCCCChH-HHHHHHHHcC-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCCCCeEEEEECHHHH
Confidence 578999999999995 7999999994 69999999999999987643 48999999999999999999999999999999
Q ss_pred HHHHHHHhcccc-cceeeeeccCCCCCccccc-cCCCCccccchhhhcccCCC-hHHHHHHHHhhhcCCCCCCCCCchhH
Q 042555 129 VGYSLAAQFPKV-LEKVVLCCSGVCLEENDME-EGLFPVTDIDEAANILVPQT-PDKLRDLIRFSFVNSKPVRGVPSCFL 205 (322)
Q Consensus 129 ~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (322)
+++.+|.++|+. |++++++++.......... ...... ......+.... .......+..... ........
T Consensus 79 va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 150 (242)
T PRK11126 79 IAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQND---RQWAQRFRQEPLEQVLADWYQQPVF-----ASLNAEQR 150 (242)
T ss_pred HHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhh---HHHHHHhccCcHHHHHHHHHhcchh-----hccCccHH
Confidence 999999999664 9999998876433221100 000000 00000000000 1111111100001 00111111
Q ss_pred HhhHHHhhhhhhhhHHHHHHHH---hcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccc
Q 042555 206 TDFIDVMCTEYVQEKRELIETI---LKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAV 282 (322)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 282 (322)
..+................... ...+....+.++++|+++++|++|..+. .+.+. .++++++++++||++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~--~~~~~~~i~~~gH~~ 223 (242)
T PRK11126 151 QQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ--LALPLHVIPNAGHNA 223 (242)
T ss_pred HHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH--hcCeEEEeCCCCCch
Confidence 1111111111111111111111 1112335677899999999999998542 23333 378999999999999
Q ss_pred cccChHHHHHHHHHHHhc
Q 042555 283 NLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 283 ~~~~~~~~~~~i~~fl~~ 300 (322)
++|+|+++++.|.+|+++
T Consensus 224 ~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 224 HRENPAAFAASLAQILRL 241 (242)
T ss_pred hhhChHHHHHHHHHHHhh
Confidence 999999999999999964
No 26
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=4.2e-33 Score=226.05 Aligned_cols=267 Identities=18% Similarity=0.217 Sum_probs=168.9
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhh-----------cHHHHHh---hhc-CCceEEeecCCCC
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMW-----------QYGEFLR---HFT-PRFNVYVPDLVFF 87 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~-----------~~~~~~~---~l~-~~~~v~~~d~~G~ 87 (322)
++.-...++ +|.+++|...+ + .++++||+||+.++... .|..++. .|. ++|+||++|+|||
T Consensus 35 ~~~~~~~~~-~~~~l~y~~~G--~-~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~ 110 (343)
T PRK08775 35 PLSMRHAGL-EDLRLRYELIG--P-AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGA 110 (343)
T ss_pred ceeecCCCC-CCceEEEEEec--c-CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCC
Confidence 455555555 88889999873 2 23457777776666542 4888886 574 5699999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhccccE-EEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCcc
Q 042555 88 GESYTTRADRTESFQARCVMRLMEVFCVKRM-SLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVT 166 (322)
Q Consensus 88 G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (322)
|.|.. ..++.+++++|+.+++++++.++. +++||||||++++.+|.++|++|+++|++++........ ..+..
T Consensus 111 g~s~~--~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~--~~~~~-- 184 (343)
T PRK08775 111 DGSLD--VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA--AAWRA-- 184 (343)
T ss_pred CCCCC--CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH--HHHHH--
Confidence 98843 357889999999999999999775 799999999999999999999999999999865322110 00000
Q ss_pred ccchhhhccc-C---CCh--HHHHHH----------HHhhhcCCCCC-CCCCchhHHhhHHH----h-hhhhhhhHHHHH
Q 042555 167 DIDEAANILV-P---QTP--DKLRDL----------IRFSFVNSKPV-RGVPSCFLTDFIDV----M-CTEYVQEKRELI 224 (322)
Q Consensus 167 ~~~~~~~~~~-~---~~~--~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~----~-~~~~~~~~~~~~ 224 (322)
......... . ... ...... +...+...... ..........+... . ............
T Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 263 (343)
T PRK08775 185 -LQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLS 263 (343)
T ss_pred -HHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHH
Confidence 000000000 0 000 000000 00111100000 00000011111111 0 000011111111
Q ss_pred HHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcC-CCccccccChHHHHHHHHHHHhccC
Q 042555 225 ETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIEN-TGHAVNLEKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 225 ~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~~ 302 (322)
..... ....+.+|++|+|+|+|++|.++|++..+++.+.+.++++++++++ +||.+++|+|++|++.|.+||++..
T Consensus 264 ~~~~~--~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 264 ESIDL--HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HHHhh--cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 11111 1234788999999999999999999999999888756899999985 9999999999999999999998654
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3.2e-33 Score=221.12 Aligned_cols=278 Identities=28% Similarity=0.364 Sum_probs=177.6
Q ss_pred cCCCceEEEEEeCCce-EEEEEecCC-------CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCC
Q 042555 20 SNAGLRSTSTDLGDGT-VMQCWVPKF-------PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGE 89 (322)
Q Consensus 20 ~~~~~~~~~i~~~~g~-~l~~~~~~~-------~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~ 89 (322)
.....+...++.+.|. .+.....+. +...+++||++|||+++. ..|+..+..|.+. +.|+++|++|+|.
T Consensus 21 ~~~~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~-~~w~~~~~~L~~~~~~~v~aiDl~G~g~ 99 (326)
T KOG1454|consen 21 SFVTLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASS-FSWRRVVPLLSKAKGLRVLAIDLPGHGY 99 (326)
T ss_pred eeccccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCc-ccHhhhccccccccceEEEEEecCCCCc
Confidence 3455677777777772 233322211 124789999999999988 4799999999998 9999999999995
Q ss_pred CC-CC-CCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceee---eeccCCCCCccccccCCCC
Q 042555 90 SY-TT-RADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVV---LCCSGVCLEENDMEEGLFP 164 (322)
Q Consensus 90 s~-~~-~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~li---l~~~~~~~~~~~~~~~~~~ 164 (322)
++ .+ ...++..++++.+..+..+...++++++|||+||.+|+.+|+.+|+.|++++ +++++..............
T Consensus 100 ~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~ 179 (326)
T KOG1454|consen 100 SSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRL 179 (326)
T ss_pred CCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHh
Confidence 44 33 4458999999999999999999999999999999999999999999999999 5555554432221110000
Q ss_pred ccccchhhhcccCCCh----HHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-----hhhhHHHHHHHHhc--cccc
Q 042555 165 VTDIDEAANILVPQTP----DKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-----YVQEKRELIETILK--DRKF 233 (322)
Q Consensus 165 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~ 233 (322)
............+... ..+...+..... ..........+.....+... .......++..... ....
T Consensus 180 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T KOG1454|consen 180 LDKFLSALELLIPLSLTEPVRLVSEGLLRCLK---VVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLL 256 (326)
T ss_pred hhhhccHhhhcCccccccchhheeHhhhccee---eeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHH
Confidence 0000011111110000 001000000000 00000011111111111000 00000011111110 1122
Q ss_pred CCCCCCC-CcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccC
Q 042555 234 CNLPKIA-QQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 234 ~~l~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 302 (322)
..+.++. ||+++++|++|.++|.+.+..+.+.+ +++++++++++||.+++|.|+++++.|..|+.+..
T Consensus 257 ~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 257 SLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred HhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 3445666 99999999999999999999999999 99999999999999999999999999999998653
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=7.2e-32 Score=220.94 Aligned_cols=270 Identities=14% Similarity=0.127 Sum_probs=167.2
Q ss_pred CceEEEEEecCCC-CCCCCeEEEEcCCCCchhh------------cHHHHH----hhhcCCceEEeecCCCC-CCCCCCC
Q 042555 33 DGTVMQCWVPKFP-KILKPNLLLLHGFGANAMW------------QYGEFL----RHFTPRFNVYVPDLVFF-GESYTTR 94 (322)
Q Consensus 33 ~g~~l~~~~~~~~-~~~~~~vv~~hG~~~~~~~------------~~~~~~----~~l~~~~~v~~~d~~G~-G~s~~~~ 94 (322)
+|.+++|...+.. ++.+|+|||+||++++... .|..++ ..+.++|+|+++|++|+ |.|+.+.
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~ 110 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPS 110 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCC
Confidence 5667899988532 2346899999999999852 266665 23356699999999983 4443221
Q ss_pred --------------CCCCHHHHHHHHHHHHHHhcccc-EEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccc-
Q 042555 95 --------------ADRTESFQARCVMRLMEVFCVKR-MSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDM- 158 (322)
Q Consensus 95 --------------~~~~~~~~~~~~~~~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~- 158 (322)
..++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 111 SINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 25799999999999999999999 58999999999999999999999999999998664432110
Q ss_pred -cc----CCCCccccc----------hh-----hh---cccCCChHHHHHHHHhhhcCCCC-CCCCCchhHHhhHHH---
Q 042555 159 -EE----GLFPVTDID----------EA-----AN---ILVPQTPDKLRDLIRFSFVNSKP-VRGVPSCFLTDFIDV--- 211 (322)
Q Consensus 159 -~~----~~~~~~~~~----------~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 211 (322)
.. .......+. .. .. .........+...+......... ...........+...
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 270 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGD 270 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHH
Confidence 00 000000000 00 00 00000000000000000000000 000000111111110
Q ss_pred -hh-hhhhhhHHHHHHHHhcc--------cccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCc----EEEEEc-
Q 042555 212 -MC-TEYVQEKRELIETILKD--------RKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESA----RLVIIE- 276 (322)
Q Consensus 212 -~~-~~~~~~~~~~~~~~~~~--------~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~----~~~~~~- 276 (322)
.. .............+... +....+.+|++|+|+|+|++|.++|++..+.+.+.+ ++. ++++++
T Consensus 271 ~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i-~~a~~~~~l~~i~~ 349 (379)
T PRK00175 271 KFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDAL-LAAGADVSYAEIDS 349 (379)
T ss_pred HHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHH-HhcCCCeEEEEeCC
Confidence 00 00111111111121111 134567899999999999999999999999999999 665 777775
Q ss_pred CCCccccccChHHHHHHHHHHHhccCC
Q 042555 277 NTGHAVNLEKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 277 ~~gH~~~~~~~~~~~~~i~~fl~~~~~ 303 (322)
++||++++++|+++++.|.+||.+...
T Consensus 350 ~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 350 PYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999987543
No 29
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=4.5e-32 Score=220.31 Aligned_cols=267 Identities=16% Similarity=0.157 Sum_probs=160.8
Q ss_pred CceEEEEEecCCCC-CCCCeEEEEcCCCCchhhcHHHHH---hhhcC-CceEEeecCCCCCCCCCCCC---CCCHH----
Q 042555 33 DGTVMQCWVPKFPK-ILKPNLLLLHGFGANAMWQYGEFL---RHFTP-RFNVYVPDLVFFGESYTTRA---DRTES---- 100 (322)
Q Consensus 33 ~g~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~-~~~v~~~d~~G~G~s~~~~~---~~~~~---- 100 (322)
+|.+++|...++++ ++.|+||++||++++.. .|..++ +.|.. +|+||++|+||||.|+.+.. .++.+
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ-DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc-cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 67889999885432 34466777777777764 365544 46764 49999999999999986532 23333
Q ss_pred -HHHHHHHH----HHHHhccccE-EEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccc--cC----CCCcccc
Q 042555 101 -FQARCVMR----LMEVFCVKRM-SLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDME--EG----LFPVTDI 168 (322)
Q Consensus 101 -~~~~~~~~----~l~~l~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~--~~----~~~~~~~ 168 (322)
.+++++.+ ++++++++++ +||||||||++|+.+|.++|++|+++|++++.......... .. +.....+
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~ 182 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAF 182 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 24555554 6688999995 79999999999999999999999999999876542211000 00 0000000
Q ss_pred chhhhcccC-CChHHHHHHH-----HhhhcCCCCCCCCC----chhHHhhHHHhhh-hhhhhHHHHHHHHhc--------
Q 042555 169 DEAANILVP-QTPDKLRDLI-----RFSFVNSKPVRGVP----SCFLTDFIDVMCT-EYVQEKRELIETILK-------- 229 (322)
Q Consensus 169 ~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------- 229 (322)
........+ .......... ...+.......... ............. .........+..+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (339)
T PRK07581 183 NGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPA 262 (339)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcc
Confidence 000000000 0000000000 00000000000000 1111111111100 011111121111110
Q ss_pred --ccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcC-CCccccccChHHHHHHHHHHHhcc
Q 042555 230 --DRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIEN-TGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 230 --~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
.+....+.+|++|+|+|+|++|..+|++..+.+.+.+ ++++++++++ +||++++++++++.+.|.+||++.
T Consensus 263 ~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 263 YGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred cCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 1233457789999999999999999999999999999 8999999998 999999999999999999999864
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.3e-31 Score=216.49 Aligned_cols=266 Identities=16% Similarity=0.167 Sum_probs=161.8
Q ss_pred EEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCC-CH----HHHHHHHHHHH
Q 042555 36 VMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADR-TE----SFQARCVMRLM 110 (322)
Q Consensus 36 ~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~-~~----~~~~~~~~~~l 110 (322)
.+.+...+ +++.+|+|||+||++++.. .|...+..|.++|+|+++|+||||.|+.+.... +. +.+++++.+++
T Consensus 93 ~~~~~~~~-~~~~~p~vvllHG~~~~~~-~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~ 170 (402)
T PLN02894 93 FINTVTFD-SKEDAPTLVMVHGYGASQG-FFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR 170 (402)
T ss_pred eEEEEEec-CCCCCCEEEEECCCCcchh-HHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH
Confidence 45544443 3456789999999999886 488888889888999999999999998663322 21 23567778888
Q ss_pred HHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccC-CCCc-cccc---------------hhhh
Q 042555 111 EVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEG-LFPV-TDID---------------EAAN 173 (322)
Q Consensus 111 ~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~-~~~~-~~~~---------------~~~~ 173 (322)
+.++.++++++||||||.+++.+|.++|++|+++|++++............ .... ..+. ....
T Consensus 171 ~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 250 (402)
T PLN02894 171 KAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIR 250 (402)
T ss_pred HHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHH
Confidence 888889999999999999999999999999999999988654332210000 0000 0000 0000
Q ss_pred cccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHh---hhh--hhhhHHHHHH---HHhcccccCCCCCCCCcEEE
Q 042555 174 ILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVM---CTE--YVQEKRELIE---TILKDRKFCNLPKIAQQTLI 245 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~---~~~~~~~~~~l~~i~~Pvl~ 245 (322)
...+.............+..................+.. ... .......... .+...+....+.++++|+++
T Consensus 251 ~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~li 330 (402)
T PLN02894 251 GLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTF 330 (402)
T ss_pred hccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEE
Confidence 000000111111111111100000001111111111110 000 0000011110 01122234567889999999
Q ss_pred EEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCCC
Q 042555 246 IWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSSL 304 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 304 (322)
|+|++|.+.+ .....+.+...+.+++++++++||+++.|+|++|++.|.+|++.....
T Consensus 331 I~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 331 IYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 9999998765 555556665534689999999999999999999999999998865544
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.4e-31 Score=208.27 Aligned_cols=251 Identities=17% Similarity=0.153 Sum_probs=163.0
Q ss_pred CCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHH
Q 042555 32 GDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT-RADRTESFQARCVMRL 109 (322)
Q Consensus 32 ~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~ 109 (322)
.+|.+++|... ++++|+|||+||++.+.. .|..+...|.+. |+|+++|+||||.|... ....+++++++++.++
T Consensus 4 ~~~~~~~~~~~---~~~~p~vvliHG~~~~~~-~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~ 79 (273)
T PLN02211 4 ENGEEVTDMKP---NRQPPHFVLIHGISGGSW-CWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDF 79 (273)
T ss_pred ccccccccccc---cCCCCeEEEECCCCCCcC-cHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHH
Confidence 37888888773 466789999999999985 699999999865 99999999999988544 2347999999999999
Q ss_pred HHHhc-cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCC-ccccchhhhc------ccC---C
Q 042555 110 MEVFC-VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFP-VTDIDEAANI------LVP---Q 178 (322)
Q Consensus 110 l~~l~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~---~ 178 (322)
++.++ .++++++||||||.++..++..+|++|+++|++++............+.. ...+...... ... .
T Consensus 80 i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T PLN02211 80 LSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPP 159 (273)
T ss_pred HHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCC
Confidence 99985 58999999999999999999999999999999987543211100000000 0000000000 000 0
Q ss_pred ChH-HHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCC-CCcEEEEEeCCCCCCCh
Q 042555 179 TPD-KLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKI-AQQTLIIWGEQDQIFPL 256 (322)
Q Consensus 179 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~g~~D~~~~~ 256 (322)
... .........++ ...+............... ...+...........+ ++|+++|.|++|..+|+
T Consensus 160 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 160 TSAIIKKEFRRKILY-----QMSPQEDSTLAAMLLRPGP-------ILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred ceeeeCHHHHHHHHh-----cCCCHHHHHHHHHhcCCcC-------ccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 000 00000000011 0001100000000000000 0000011111223345 78999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 257 ELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+..+.+.+.+ +..+++.++ +||.+++++|+++++.|.++...
T Consensus 228 ~~~~~m~~~~-~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 228 EQQEAMIKRW-PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred HHHHHHHHhC-CccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 9999999998 778999996 89999999999999999988653
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1e-32 Score=212.40 Aligned_cols=225 Identities=25% Similarity=0.350 Sum_probs=154.5
Q ss_pred EEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHH
Q 042555 52 LLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR--ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFV 129 (322)
Q Consensus 52 vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~ 129 (322)
|||+||++++.. .|..+++.|+++|+|+++|+||+|.|+.+. ..++.+++++++.+++++++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~-~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSE-SWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGG-GGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHH-HHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 799999999996 699999999767999999999999998765 46889999999999999999999999999999999
Q ss_pred HHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhH
Q 042555 130 GYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFI 209 (322)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
++.++.++|++|+++|+++++........ ..........+...............+. ............
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 148 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPS------RSFGPSFIRRLLAWRSRSLRRLASRFFY-----RWFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHC------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHTHHHHHHHH
T ss_pred ccccccccccccccceeeccccccccccc------ccccchhhhhhhhccccccccccccccc-----cccccccccccc
Confidence 99999999999999999998874332100 0000000000000000000011001110 000111111111
Q ss_pred HHhhhhhhhhHHHHHHH-HhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChH
Q 042555 210 DVMCTEYVQEKRELIET-ILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPK 288 (322)
Q Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 288 (322)
. ............ ....+....+.++++|+++++|++|.+++.+..+.+.+.+ +++++++++++||++++++|+
T Consensus 149 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~ 223 (228)
T PF12697_consen 149 R----SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKL-PNAELVVIPGAGHFLFLEQPD 223 (228)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHH
T ss_pred c----ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHH
Confidence 1 111111111111 1111233456677999999999999999999999999988 899999999999999999999
Q ss_pred HHHHH
Q 042555 289 ELLKH 293 (322)
Q Consensus 289 ~~~~~ 293 (322)
+++++
T Consensus 224 ~~~~a 228 (228)
T PF12697_consen 224 EVAEA 228 (228)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 98764
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=9.2e-32 Score=218.95 Aligned_cols=265 Identities=15% Similarity=0.193 Sum_probs=166.0
Q ss_pred CceEEEEEecCCC-CCCCCeEEEEcCCCCchhh----------cHHHHH---hhh-cCCceEEeecCCC--CCCCCCC--
Q 042555 33 DGTVMQCWVPKFP-KILKPNLLLLHGFGANAMW----------QYGEFL---RHF-TPRFNVYVPDLVF--FGESYTT-- 93 (322)
Q Consensus 33 ~g~~l~~~~~~~~-~~~~~~vv~~hG~~~~~~~----------~~~~~~---~~l-~~~~~v~~~d~~G--~G~s~~~-- 93 (322)
+|.+++|..+++. ...+++||++||++++... .|..++ ..| .++|+|+++|+|| ||.|...
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 6788999998532 2346799999999997631 277775 244 4559999999999 6665431
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHhcccc-EEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccc--ccc
Q 042555 94 ----------RADRTESFQARCVMRLMEVFCVKR-MSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEEND--MEE 160 (322)
Q Consensus 94 ----------~~~~~~~~~~~~~~~~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~--~~~ 160 (322)
...++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++........ +..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNE 173 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHH
Confidence 124789999999999999999998 9999999999999999999999999999999876543211 000
Q ss_pred ----CCCCccccchhhhcccCCCh-HHH--HH-----------HHHhhhcCCCCCCCCC------chhHHhhHH----Hh
Q 042555 161 ----GLFPVTDIDEAANILVPQTP-DKL--RD-----------LIRFSFVNSKPVRGVP------SCFLTDFID----VM 212 (322)
Q Consensus 161 ----~~~~~~~~~~~~~~~~~~~~-~~~--~~-----------~~~~~~~~~~~~~~~~------~~~~~~~~~----~~ 212 (322)
.......+... .......+ ... .. .+...+.........+ ....+.+.. ..
T Consensus 174 ~~~~~~~~~~~~~~g-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (351)
T TIGR01392 174 VQRQAILADPNWNDG-DYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKF 252 (351)
T ss_pred HHHHHHHhCCCCCCC-CCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHH
Confidence 00000000000 00000000 000 00 0111111000000000 001111111 01
Q ss_pred hhh-hhhhHHHHHHHHhccc-------ccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEE-----EEcCCC
Q 042555 213 CTE-YVQEKRELIETILKDR-------KFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLV-----IIENTG 279 (322)
Q Consensus 213 ~~~-~~~~~~~~~~~~~~~~-------~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g 279 (322)
... ...........+...+ ....+.+|++|+|+|+|++|.++|++..+.+++.+ ++.+++ +++++|
T Consensus 253 ~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i-~~~~~~v~~~~i~~~~G 331 (351)
T TIGR01392 253 VDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKAL-PAAGLRVTYVEIESPYG 331 (351)
T ss_pred HhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHH-hhcCCceEEEEeCCCCC
Confidence 110 0111111112222211 23567889999999999999999999999999999 777655 557899
Q ss_pred ccccccChHHHHHHHHHHHh
Q 042555 280 HAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 280 H~~~~~~~~~~~~~i~~fl~ 299 (322)
|.+++++|+++++.|.+||+
T Consensus 332 H~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 332 HDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cchhhcCHHHHHHHHHHHhC
Confidence 99999999999999999984
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=6.7e-31 Score=209.71 Aligned_cols=268 Identities=17% Similarity=0.106 Sum_probs=163.1
Q ss_pred EEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcC-CceEEeecCCCCCCCCCCCC---CCCHHHHH
Q 042555 28 STDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTP-RFNVYVPDLVFFGESYTTRA---DRTESFQA 103 (322)
Q Consensus 28 ~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~~---~~~~~~~~ 103 (322)
.++. +|.++.|...++ .+.+++|||+||++++....|..+...+.+ +|+|+++|+||||.|..+.. .++.+.++
T Consensus 6 ~~~~-~~~~~~~~~~~~-~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGG-EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecC-CCCeEEEEeccC-CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 3455 566677777632 334689999999866654446667777776 49999999999999986532 37899999
Q ss_pred HHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccc-ccCCCCccc---cchhhhcc--cC
Q 042555 104 RCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDM-EEGLFPVTD---IDEAANIL--VP 177 (322)
Q Consensus 104 ~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~--~~ 177 (322)
+++.+++++++.++++++|||+||.+++.+|..+|+++++++++++......... ......... ........ ..
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGD 163 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999987543221100 000000000 00000000 00
Q ss_pred CChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhH-----HHHHHHHhcccccCCCCCCCCcEEEEEeCCCC
Q 042555 178 QTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEK-----RELIETILKDRKFCNLPKIAQQTLIIWGEQDQ 252 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 252 (322)
........................................... ......+...+....+.++++|+++++|++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 243 (288)
T TIGR01250 164 YDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDT 243 (288)
T ss_pred cchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCc
Confidence 0000000111000000000000000000000000000000000 00000001111234567889999999999998
Q ss_pred CCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 253 IFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
+ +++..+.+.+.+ ++.++++++++||+++.++|+++.+.|.+||+
T Consensus 244 ~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 244 M-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred c-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 5 567888888888 88999999999999999999999999999984
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=100.00 E-value=9.5e-31 Score=216.00 Aligned_cols=252 Identities=21% Similarity=0.296 Sum_probs=170.0
Q ss_pred EEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHH
Q 042555 28 STDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVM 107 (322)
Q Consensus 28 ~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 107 (322)
.+.. ++.+++|... +.+++++|||+||++++.. .|..+...|.+.|+|+++|+||||.|.......+++++++++.
T Consensus 113 ~~~~-~~~~i~~~~~--g~~~~~~vl~~HG~~~~~~-~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 188 (371)
T PRK14875 113 KARI-GGRTVRYLRL--GEGDGTPVVLIHGFGGDLN-NWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVL 188 (371)
T ss_pred cceE-cCcEEEEecc--cCCCCCeEEEECCCCCccc-hHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 4455 5677888776 3456789999999999996 6999999998889999999999999976666789999999999
Q ss_pred HHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHH
Q 042555 108 RLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLI 187 (322)
Q Consensus 108 ~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (322)
++++.++.++++++|||+||.+++.+|..+|+++.++|++++........ ..+ ............+...+
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~ 258 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN--GDY--------IDGFVAAESRRELKPVL 258 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc--hhH--------HHHhhcccchhHHHHHH
Confidence 99999998999999999999999999999999999999998764322110 000 00000001111122222
Q ss_pred HhhhcCCCCCCCCCchhHHhhHHHhhhhh-hhhHHHHHHHHhc-----ccccCCCCCCCCcEEEEEeCCCCCCChHHHHH
Q 042555 188 RFSFVNSKPVRGVPSCFLTDFIDVMCTEY-VQEKRELIETILK-----DRKFCNLPKIAQQTLIIWGEQDQIFPLELGHR 261 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~ 261 (322)
...+. .+ ................... ............. .+....+.++++|+++++|++|.++|.+..+.
T Consensus 259 ~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~ 335 (371)
T PRK14875 259 ELLFA--DP-ALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQG 335 (371)
T ss_pred HHHhc--Ch-hhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhh
Confidence 22221 00 1111111111111110000 0001111111100 11223456789999999999999999876654
Q ss_pred HHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 262 LKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 262 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+ . .+.++.+++++||++++++|+++++.|.+||++
T Consensus 336 l---~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 336 L---P-DGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred c---c-CCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 3 2 568999999999999999999999999999975
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.98 E-value=1.2e-30 Score=203.98 Aligned_cols=244 Identities=20% Similarity=0.327 Sum_probs=157.7
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCC--CCCCHHHHHHH-HHHHHHHhccccEEEEEEch
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTR--ADRTESFQARC-VMRLMEVFCVKRMSLVGISY 125 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~-~~~~l~~l~~~~~~lvGhS~ 125 (322)
+|+||++||++++.. .|..+.+.|++.|+|+++|+||||.|+.+. ...++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~-~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGA-DWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchh-hHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 478999999999996 699999999966999999999999998653 45688888988 77888888889999999999
Q ss_pred hHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHH-HHHHHhhhcCCCCCCCCCchh
Q 042555 126 GGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKL-RDLIRFSFVNSKPVRGVPSCF 204 (322)
Q Consensus 126 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 204 (322)
||.+++.+|.++|+.|++++++++............ ...........+.......+ ......... ......+...
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 155 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEERAA--RRQNDEQLAQRFEQEGLEAFLDDWYQQPLF--ASQKNLPPEQ 155 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh--hhhcchhhhhHHHhcCccHHHHHHhcCcee--eecccCChHH
Confidence 999999999999999999999987654332110000 00000000000000000011 111000001 0000111111
Q ss_pred HHhhHHHhhhhhhhhHHHHHHHHh---cccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcc
Q 042555 205 LTDFIDVMCTEYVQEKRELIETIL---KDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHA 281 (322)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 281 (322)
...................+.... .......+.++++|+++++|++|..++ +..+.+.+.. +++++++++++||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~ 233 (251)
T TIGR03695 156 RQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHN 233 (251)
T ss_pred hHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCC
Confidence 111111111111111111111111 111233466889999999999998764 5667777777 88999999999999
Q ss_pred ccccChHHHHHHHHHHHh
Q 042555 282 VNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 282 ~~~~~~~~~~~~i~~fl~ 299 (322)
+++++|+++.+.|.+|++
T Consensus 234 ~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 234 IHLENPEAFAKILLAFLE 251 (251)
T ss_pred cCccChHHHHHHHHHHhC
Confidence 999999999999999984
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=2.5e-29 Score=204.79 Aligned_cols=262 Identities=17% Similarity=0.244 Sum_probs=168.0
Q ss_pred eEEEEEeCCceEEEEEecCCC-CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCC-CCCHHH
Q 042555 25 RSTSTDLGDGTVMQCWVPKFP-KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRA-DRTESF 101 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~-~~~~~~ 101 (322)
....+..+++..+++..+.+. ...+++||++||++++.. .|..++..|.+. |+|+++|+||||.|+.... ..+.+.
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~-~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 189 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSG-RYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDY 189 (395)
T ss_pred EEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHH-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHH
Confidence 334455567788888887653 344578999999999885 599999999876 9999999999999986532 457888
Q ss_pred HHHHHHHHHHHhcc----ccEEEEEEchhHHHHHHHHHhcc---cccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 102 QARCVMRLMEVFCV----KRMSLVGISYGGFVGYSLAAQFP---KVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 102 ~~~~~~~~l~~l~~----~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
+++|+.++++.+.. .+++++||||||.+++.++. +| ++++++|+.+|............ ........
T Consensus 190 ~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~-----~~~~l~~~ 263 (395)
T PLN02652 190 VVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVG-----AVAPIFSL 263 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHH-----HHHHHHHH
Confidence 89999999988753 37999999999999998765 55 47999999988653321100000 00000000
Q ss_pred ccCCChHHHHHHHHhhhcCCC--CCCCCCchhHHhhHHHhhhh---hhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeC
Q 042555 175 LVPQTPDKLRDLIRFSFVNSK--PVRGVPSCFLTDFIDVMCTE---YVQEKRELIETILKDRKFCNLPKIAQQTLIIWGE 249 (322)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 249 (322)
..+... ....... +....+......+.+..... ............ ......+.++++|+|+++|+
T Consensus 264 ~~p~~~--------~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~--~~l~~~L~~I~vPvLIi~G~ 333 (395)
T PLN02652 264 VAPRFQ--------FKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS--SYLTRNFKSVTVPFMVLHGT 333 (395)
T ss_pred hCCCCc--------ccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH--HHHHhhcccCCCCEEEEEeC
Confidence 000000 0000000 00000000000000000000 000000111110 01244677899999999999
Q ss_pred CCCCCChHHHHHHHHHhc-CCcEEEEEcCCCcccccc-ChHHHHHHHHHHHhccCC
Q 042555 250 QDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLE-KPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 250 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~ 303 (322)
+|.++|++.++++++.+. ++++++++++++|.++.+ +++++.+.|.+||.++.+
T Consensus 334 ~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 334 ADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999998863 357899999999999777 789999999999987654
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=5.1e-30 Score=240.62 Aligned_cols=280 Identities=19% Similarity=0.262 Sum_probs=177.4
Q ss_pred ceeecCCCceEEEEEeCCc-eE--EEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCC
Q 042555 16 RYSFSNAGLRSTSTDLGDG-TV--MQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYT 92 (322)
Q Consensus 16 ~~~~~~~~~~~~~i~~~~g-~~--l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~ 92 (322)
.+.+...++....+.+..+ .. ++|...+ ..+.+++|||+||++++.. .|..++..|.+.|+|+++|+||||.|..
T Consensus 1336 ~~~~~~~~l~~~~~~v~~~~~~~~i~~~~~G-~~~~~~~vVllHG~~~s~~-~w~~~~~~L~~~~rVi~~Dl~G~G~S~~ 1413 (1655)
T PLN02980 1336 VRTFKEEQVRTYELRVDVDGFSCLIKVHEVG-QNAEGSVVLFLHGFLGTGE-DWIPIMKAISGSARCISIDLPGHGGSKI 1413 (1655)
T ss_pred HHHhccCCCceEEEEEccCceEEEEEEEecC-CCCCCCeEEEECCCCCCHH-HHHHHHHHHhCCCEEEEEcCCCCCCCCC
Confidence 3445556666666666433 22 3333432 1234689999999999996 6999999998889999999999999975
Q ss_pred CC--------CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCC
Q 042555 93 TR--------ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFP 164 (322)
Q Consensus 93 ~~--------~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (322)
.. ..++++.+++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++........ ......
T Consensus 1414 ~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~-~~~~~~ 1492 (1655)
T PLN02980 1414 QNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEV-ARKIRS 1492 (1655)
T ss_pred ccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchH-HHHHHh
Confidence 42 356899999999999999999999999999999999999999999999999998754322111 000000
Q ss_pred ccccchhhhcccCCChHHHHHHHHhhhcCCC-CCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHh---cccccCCCCCCC
Q 042555 165 VTDIDEAANILVPQTPDKLRDLIRFSFVNSK-PVRGVPSCFLTDFIDVMCTEYVQEKRELIETIL---KDRKFCNLPKIA 240 (322)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~ 240 (322)
... ......+.. .....+....+.... ............................+..+. ..+....+.+++
T Consensus 1493 ~~~-~~~~~~l~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~ 1568 (1655)
T PLN02980 1493 AKD-DSRARMLID---HGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCD 1568 (1655)
T ss_pred hhh-hHHHHHHHh---hhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCC
Confidence 000 000000000 001111111111000 000001111111111111111111222222221 112335688999
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhcCC------------cEEEEEcCCCccccccChHHHHHHHHHHHhccCCC
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIGES------------ARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSSL 304 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 304 (322)
+|+|+|+|++|..++ +..+++.+.+ ++ +++++++++||++++|+|+.+++.|.+||.+....
T Consensus 1569 ~PtLlI~Ge~D~~~~-~~a~~~~~~i-~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~ 1642 (1655)
T PLN02980 1569 TPLLLVVGEKDVKFK-QIAQKMYREI-GKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNS 1642 (1655)
T ss_pred CCEEEEEECCCCccH-HHHHHHHHHc-cccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhcccc
Confidence 999999999999875 6667777776 43 58999999999999999999999999999976543
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=2.3e-30 Score=192.88 Aligned_cols=261 Identities=16% Similarity=0.186 Sum_probs=178.7
Q ss_pred ceEEEEEeCCceEEEEEecCCCC--CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC-CCCCH
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPK--ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR-ADRTE 99 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~~~ 99 (322)
.....++..+|.++.+..+.|.. ...-.|+++||++....+.|..++..|+.. |.|+++|++|||.|++.. ...++
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~ 106 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSF 106 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcH
Confidence 45667788899999988886644 334478999999998866788999999988 999999999999999763 44578
Q ss_pred HHHHHHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhh
Q 042555 100 SFQARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAAN 173 (322)
Q Consensus 100 ~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (322)
+..++|+....+.. ...+..++||||||.+++.++.++|+..+++|+++|.....+........ ........
T Consensus 107 d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v--~~~l~~l~ 184 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV--ISILTLLS 184 (313)
T ss_pred HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH--HHHHHHHH
Confidence 88999999988864 23578999999999999999999999999999999977655332000000 00000000
Q ss_pred cccCCChHHHHHHHHhhhcCCCCCC-----CCCchhHHhhHH--Hhhhh---hhhhHHHHHHHHhcccccCCCCCCCCcE
Q 042555 174 ILVPQTPDKLRDLIRFSFVNSKPVR-----GVPSCFLTDFID--VMCTE---YVQEKRELIETILKDRKFCNLPKIAQQT 243 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 243 (322)
.+.+... . -+.. ...+........ .+... ......++++... +....+.++++|.
T Consensus 185 ~liP~wk-----------~--vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~--~le~~l~~vtvPf 249 (313)
T KOG1455|consen 185 KLIPTWK-----------I--VPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA--DLEKNLNEVTVPF 249 (313)
T ss_pred HhCCcee-----------e--cCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH--HHHHhcccccccE
Confidence 0000000 0 0000 000000000000 00000 1111222222111 1566788999999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccc----cChHHHHHHHHHHHhcc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNL----EKPKELLKHLKSFLIVD 301 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~----~~~~~~~~~i~~fl~~~ 301 (322)
+++||++|.++.++.++.+++... .+.++.+|||.-|..+. ++.+.+...|.+||.++
T Consensus 250 lilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 250 LILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred EEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999885 67899999999999885 34467889999999865
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=2.8e-29 Score=200.80 Aligned_cols=264 Identities=17% Similarity=0.126 Sum_probs=159.4
Q ss_pred eEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcC-CceEEeecCCCCCCCCCCC--CCCCHHH
Q 042555 25 RSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTP-RFNVYVPDLVFFGESYTTR--ADRTESF 101 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~ 101 (322)
...++...+|.+++|... +++++++|||+||++++.. +..+...+.. .|+|+++|+||||.|+.+. ..++.++
T Consensus 5 ~~~~~~~~~~~~l~y~~~--g~~~~~~lvllHG~~~~~~--~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 80 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQS--GNPDGKPVVFLHGGPGSGT--DPGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWD 80 (306)
T ss_pred cCCeEEcCCCcEEEEEEC--cCCCCCEEEEECCCCCCCC--CHHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHH
Confidence 456888889999999887 3445678999999888763 2344445544 4999999999999998653 2467889
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccc-ccc--CCCCc--cccchhhhccc
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEEND-MEE--GLFPV--TDIDEAANILV 176 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~--~~~~~--~~~~~~~~~~~ 176 (322)
+++|+..++++++.++++++||||||.+++.++.++|++|+++|++++........ ... ..... ..+........
T Consensus 81 ~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T TIGR01249 81 LVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIP 160 (306)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCC
Confidence 99999999999999999999999999999999999999999999998765422100 000 00000 00000000000
Q ss_pred CCC--hHHHHHHHHhhhcCCCCCCCCCchhHHhh---HH-Hhhhhh--------hhhHHHHHHHH----------hc--c
Q 042555 177 PQT--PDKLRDLIRFSFVNSKPVRGVPSCFLTDF---ID-VMCTEY--------VQEKRELIETI----------LK--D 230 (322)
Q Consensus 177 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~--------~~~~~~~~~~~----------~~--~ 230 (322)
... ......... .+.. ............+ .. ...... .......+..+ .. .
T Consensus 161 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
T TIGR01249 161 ENERNEQLVNAYHD-RLQS--GDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVEN 237 (306)
T ss_pred hhhhhccHHHHHHH-HccC--CCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCch
Confidence 000 011111111 1110 0000000000000 00 000000 00000000000 00 0
Q ss_pred cccCCCCCC-CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 231 RKFCNLPKI-AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 231 ~~~~~l~~i-~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
.....+.++ ++|+++|+|++|.++|.+..+.+++.+ ++.++++++++||.++.+. ..+.|.+|+.
T Consensus 238 ~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~---~~~~i~~~~~ 303 (306)
T TIGR01249 238 FILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAF-PEAELKVTNNAGHSAFDPN---NLAALVHALE 303 (306)
T ss_pred HHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhC-CCCEEEEECCCCCCCCChH---HHHHHHHHHH
Confidence 012345566 589999999999999999999999999 8999999999999986432 3344444443
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=179.15 Aligned_cols=224 Identities=22% Similarity=0.300 Sum_probs=165.0
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---ccccEEEEEE
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF---CVKRMSLVGI 123 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGh 123 (322)
++..|+++||+.|+.+ +.+.+.+.|.++ |.|.+|.+||||......-..+.++|.+++.+..+.| +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~-Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPR-DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcH-HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 3379999999999996 799999999998 9999999999999876666778888888877776665 6789999999
Q ss_pred chhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCch
Q 042555 124 SYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSC 203 (322)
Q Consensus 124 S~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (322)
||||.+++.+|..+| ++++|.++++....... ..+...+. .+.+.+.......+
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-----------------------~iie~~l~-y~~~~kk~e~k~~e 146 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-----------------------IIIEGLLE-YFRNAKKYEGKDQE 146 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccch-----------------------hhhHHHHH-HHHHhhhccCCCHH
Confidence 999999999999999 99999999887543221 00111111 11111121223333
Q ss_pred hHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccc
Q 042555 204 FLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAV 282 (322)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~ 282 (322)
..+................+...+.. ....+..|..|++++.|.+|+++|.+.++.+.+.+. .+.++.+++++||.+
T Consensus 147 ~~~~e~~~~~~~~~~~~~~~~~~i~~--~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVI 224 (243)
T COG1647 147 QIDKEMKSYKDTPMTTTAQLKKLIKD--ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVI 224 (243)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHH--HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCcee
Confidence 33333333332222222222222221 456788999999999999999999999999999885 567999999999998
Q ss_pred ccc-ChHHHHHHHHHHHhc
Q 042555 283 NLE-KPKELLKHLKSFLIV 300 (322)
Q Consensus 283 ~~~-~~~~~~~~i~~fl~~ 300 (322)
..+ ..+++.+.|..||++
T Consensus 225 t~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 225 TLDKERDQVEEDVITFLEK 243 (243)
T ss_pred ecchhHHHHHHHHHHHhhC
Confidence 775 568899999999963
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=2.6e-29 Score=197.10 Aligned_cols=269 Identities=18% Similarity=0.167 Sum_probs=175.5
Q ss_pred eEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCC-CC-CCCCCHHH
Q 042555 25 RSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESY-TT-RADRTESF 101 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~-~~-~~~~~~~~ 101 (322)
........||..++|..+.+..+...+||++||++.+... |..++..|... |.|+++|+||||.|. .. ....++.+
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~r-y~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGR-YEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHH-HHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 3445555699999999987555554799999999999974 99999999888 999999999999997 33 34445899
Q ss_pred HHHHHHHHHHHhc----cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCc--cccccCCCCccccchhhhcc
Q 042555 102 QARCVMRLMEVFC----VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEE--NDMEEGLFPVTDIDEAANIL 175 (322)
Q Consensus 102 ~~~~~~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 175 (322)
+.+|+..+++... ..+++++||||||.+++.++.+++.+|+++|+.+|...... ...................+
T Consensus 89 ~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~ 168 (298)
T COG2267 89 YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKL 168 (298)
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccccccccc
Confidence 9999999998874 47899999999999999999999999999999999886653 00000000000000000000
Q ss_pred cCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhh-hh---hhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCC
Q 042555 176 VPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMC-TE---YVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQD 251 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D 251 (322)
.... . . . .... .....-.....+.+.+.-. .. ............. .........+++|+|+++|++|
T Consensus 169 ~~~~-~--~---~-~~~~-~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-~~~~~~~~~~~~PvLll~g~~D 239 (298)
T COG2267 169 PVDS-N--L---L-EGVL-TDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-VPALRDAPAIALPVLLLQGGDD 239 (298)
T ss_pred ccCc-c--c---c-cCcC-cchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc-ccchhccccccCCEEEEecCCC
Confidence 0000 0 0 0 0000 0000000111111111000 00 0000111111111 1133446678999999999999
Q ss_pred CCCC-hHHHHHHHHHhc-CCcEEEEEcCCCccccccC-h--HHHHHHHHHHHhccCC
Q 042555 252 QIFP-LELGHRLKRHIG-ESARLVIIENTGHAVNLEK-P--KELLKHLKSFLIVDSS 303 (322)
Q Consensus 252 ~~~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~--~~~~~~i~~fl~~~~~ 303 (322)
.+++ .+...++.+..+ +++++++++|+.|.++.|. . +++.+.+.+|+.+..+
T Consensus 240 ~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 240 RVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred ccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999 688888877775 6689999999999998874 4 7899999999987654
No 43
>PLN02511 hydrolase
Probab=99.97 E-value=3.7e-30 Score=210.76 Aligned_cols=272 Identities=14% Similarity=0.058 Sum_probs=165.0
Q ss_pred CCCceEEEEEeCCceEEEEEecC----CCCCCCCeEEEEcCCCCchhhcH-HHHHhhh-cCCceEEeecCCCCCCCCCCC
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPK----FPKILKPNLLLLHGFGANAMWQY-GEFLRHF-TPRFNVYVPDLVFFGESYTTR 94 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~----~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l-~~~~~v~~~d~~G~G~s~~~~ 94 (322)
....++..+.++||..+.+.... ..+..+|+||++||+++++...| ..++..+ .++|+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 34456788899999888764332 12356789999999987763224 4455544 445999999999999997653
Q ss_pred CCCCHHHHHHHHHHHHHHhcc----ccEEEEEEchhHHHHHHHHHhcccc--cceeeeeccCCCCCccccccCCCCcccc
Q 042555 95 ADRTESFQARCVMRLMEVFCV----KRMSLVGISYGGFVGYSLAAQFPKV--LEKVVLCCSGVCLEENDMEEGLFPVTDI 168 (322)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~l~~----~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~ 168 (322)
........++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++...... ...+... .
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~--~~~~~~~--~ 223 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA--DEDFHKG--F 223 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH--HHHHhcc--H
Confidence 333345667888888888754 5899999999999999999999987 8888888776543110 0000000 0
Q ss_pred chhhhcccCCChHHHHHHHHh---hhcCCCCCCCCCc------hhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCC
Q 042555 169 DEAANILVPQTPDKLRDLIRF---SFVNSKPVRGVPS------CFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKI 239 (322)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 239 (322)
... ........+.+.... .+. ........ ....++.+..... ..........+...+....+.+|
T Consensus 224 ~~~---y~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~fd~~~t~~-~~gf~~~~~yy~~~s~~~~L~~I 297 (388)
T PLN02511 224 NNV---YDKALAKALRKIFAKHALLFE--GLGGEYNIPLVANAKTVRDFDDGLTRV-SFGFKSVDAYYSNSSSSDSIKHV 297 (388)
T ss_pred HHH---HHHHHHHHHHHHHHHHHHHHh--hCCCccCHHHHHhCCCHHHHHHhhhhh-cCCCCCHHHHHHHcCchhhhccC
Confidence 000 000000001111110 000 00000000 0011111100000 00000000111122245678899
Q ss_pred CCcEEEEEeCCCCCCChHHH-HHHHHHhcCCcEEEEEcCCCccccccChHH------HHHHHHHHHhccCC
Q 042555 240 AQQTLIIWGEQDQIFPLELG-HRLKRHIGESARLVIIENTGHAVNLEKPKE------LLKHLKSFLIVDSS 303 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~------~~~~i~~fl~~~~~ 303 (322)
++|+|+|+|++|+++|.+.. ....+.. +++++++++++||..++|.|+. +.+.+.+||+....
T Consensus 298 ~vPtLiI~g~dDpi~p~~~~~~~~~~~~-p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 298 RVPLLCIQAANDPIAPARGIPREDIKAN-PNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCCeEEEEcCCCCcCCcccCcHhHHhcC-CCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999998754 4455666 8999999999999999999875 47889999976543
No 44
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=1.6e-29 Score=175.95 Aligned_cols=253 Identities=17% Similarity=0.156 Sum_probs=176.3
Q ss_pred CCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCH
Q 042555 22 AGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTE 99 (322)
Q Consensus 22 ~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~ 99 (322)
....+..+.+ +|.+++|..++ .....|++++|.-++..-+|.+.+..|.+. +.++++|.||+|.|.+|......
T Consensus 19 ~~~te~kv~v-ng~ql~y~~~G---~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~ 94 (277)
T KOG2984|consen 19 SDYTESKVHV-NGTQLGYCKYG---HGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV 94 (277)
T ss_pred chhhhheeee-cCceeeeeecC---CCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH
Confidence 3445666777 89999999983 333479999998777756898888777665 99999999999999988666655
Q ss_pred HH---HHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhccc
Q 042555 100 SF---QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 100 ~~---~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (322)
+. .+++...+++.|..+++.++|+|-||..|+..|+++++.|..+|+.++........ ...+.... ....+.
T Consensus 95 ~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~-~ma~kgiR---dv~kWs- 169 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLG-AMAFKGIR---DVNKWS- 169 (277)
T ss_pred HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchh-HHHHhchH---HHhhhh-
Confidence 44 46677788899999999999999999999999999999999999998876554321 00000000 000000
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCCh
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPL 256 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~ 256 (322)
...++-+...+ -++.+...+ ........++............+++++||+++++|++|++++.
T Consensus 170 ----~r~R~P~e~~Y--------g~e~f~~~w-----a~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~ 232 (277)
T KOG2984|consen 170 ----ARGRQPYEDHY--------GPETFRTQW-----AAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGD 232 (277)
T ss_pred ----hhhcchHHHhc--------CHHHHHHHH-----HHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCC
Confidence 00000000000 011111111 1111111111111111115567899999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 257 ELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
..+..+.... +.+++.+.|.++|.+++..+++|...+.+||+++
T Consensus 233 ~hv~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 233 PHVCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CCccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 9888888888 8999999999999999999999999999999864
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=1.2e-28 Score=215.36 Aligned_cols=263 Identities=15% Similarity=0.118 Sum_probs=161.3
Q ss_pred eCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCC--CCCCCHHHHHHHHHH
Q 042555 31 LGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTT--RADRTESFQARCVMR 108 (322)
Q Consensus 31 ~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~--~~~~~~~~~~~~~~~ 108 (322)
..+|.+++|+..+ ++++|+|||+||++++.. .|..+.+.|.+.|+|+++|+||||.|+.+ ...++.+++++|+..
T Consensus 9 ~~~g~~l~~~~~g--~~~~~~ivllHG~~~~~~-~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~ 85 (582)
T PRK05855 9 SSDGVRLAVYEWG--DPDRPTVVLVHGYPDNHE-VWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAA 85 (582)
T ss_pred eeCCEEEEEEEcC--CCCCCeEEEEcCCCchHH-HHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHH
Confidence 3489999999883 456789999999999996 59999999977799999999999999865 346789999999999
Q ss_pred HHHHhcccc-EEEEEEchhHHHHHHHHHhc--ccccceeeeeccCCCCCccccccC-CCC--ccccchhhhcccC-----
Q 042555 109 LMEVFCVKR-MSLVGISYGGFVGYSLAAQF--PKVLEKVVLCCSGVCLEENDMEEG-LFP--VTDIDEAANILVP----- 177 (322)
Q Consensus 109 ~l~~l~~~~-~~lvGhS~Gg~~a~~~a~~~--p~~v~~lil~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~----- 177 (322)
++++++..+ ++|+||||||.+++.++.+. ++++..++.++++.......+... ... .............
T Consensus 86 ~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (582)
T PRK05855 86 VIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIY 165 (582)
T ss_pred HHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHH
Confidence 999998765 99999999999999888762 445555554443221100000000 000 0000000000000
Q ss_pred -----CChHH-----HHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEE
Q 042555 178 -----QTPDK-----LRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIW 247 (322)
Q Consensus 178 -----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 247 (322)
..... .......... ......... ................+...............+++|+++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~ 240 (582)
T PRK05855 166 LFHLPVLPELLWRLGLGRAWPRLLR---RVEGTPVDP--IPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIV 240 (582)
T ss_pred HHhCCCCcHHHhccchhhHHHHhhh---hccCCCcch--hhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEE
Confidence 00000 0000000000 000000000 00000000000000111111111112223556899999999
Q ss_pred eCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCC
Q 042555 248 GEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 248 g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 303 (322)
|++|.++|.+..+.+.+.+ ++.++++++ +||+++.|+|+++.+.|.+|+.+...
T Consensus 241 G~~D~~v~~~~~~~~~~~~-~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 241 PTGDPYVRPALYDDLSRWV-PRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred eCCCcccCHHHhccccccC-CcceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 9999999999999988888 788888886 69999999999999999999987543
No 46
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=5.9e-27 Score=192.59 Aligned_cols=242 Identities=15% Similarity=0.116 Sum_probs=158.2
Q ss_pred CCCceEEEEEeCCceEEEEEecCC-CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCC
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPKF-PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRT 98 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~~-~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~ 98 (322)
...++...+...+|.++..+...| ++++.|+||++||+++..+..|..+++.|++. |.|+++|+||+|.|.......+
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d 244 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQD 244 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcccc
Confidence 445777788887886777655433 33456677777777665433488888888877 9999999999999975432234
Q ss_pred HHHHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcc
Q 042555 99 ESFQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANIL 175 (322)
Q Consensus 99 ~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (322)
......++.+++... +.++++++|||+||.+++.+|..+|++|+++|+++++....... . . ..
T Consensus 245 ~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~-~-------~---~~--- 310 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD-P-------K---RQ--- 310 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc-h-------h---hh---
Confidence 444455566666554 55789999999999999999999999999999998875321000 0 0 00
Q ss_pred cCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCC-CCCCCCcEEEEEeCCCCCC
Q 042555 176 VPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCN-LPKIAQQTLIIWGEQDQIF 254 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~i~~Pvl~i~g~~D~~~ 254 (322)
...+......+...+. . ...... .+ ...+..+... .... ..++++|+|+|+|++|.++
T Consensus 311 -~~~p~~~~~~la~~lg--~--~~~~~~---~l------------~~~l~~~sl~-~~~~l~~~i~~PvLiI~G~~D~iv 369 (414)
T PRK05077 311 -QQVPEMYLDVLASRLG--M--HDASDE---AL------------RVELNRYSLK-VQGLLGRRCPTPMLSGYWKNDPFS 369 (414)
T ss_pred -hhchHHHHHHHHHHhC--C--CCCChH---HH------------HHHhhhccch-hhhhhccCCCCcEEEEecCCCCCC
Confidence 0001111111111111 0 000000 00 0001111000 0111 1578999999999999999
Q ss_pred ChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 255 PLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
|.+..+.+.+.. ++.+++++|++ ++.+.++++.+.|.+||+++
T Consensus 370 P~~~a~~l~~~~-~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 370 PEEDSRLIASSS-ADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred CHHHHHHHHHhC-CCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 999999998888 89999999986 45579999999999999864
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1e-26 Score=188.70 Aligned_cols=265 Identities=14% Similarity=0.111 Sum_probs=166.5
Q ss_pred eEEEEEecCCCC-CCCCeEEEEcCCCCchhh------------cHHHHH---hhhcCC-ceEEeecCCCCCCCCC-----
Q 042555 35 TVMQCWVPKFPK-ILKPNLLLLHGFGANAMW------------QYGEFL---RHFTPR-FNVYVPDLVFFGESYT----- 92 (322)
Q Consensus 35 ~~l~~~~~~~~~-~~~~~vv~~hG~~~~~~~------------~~~~~~---~~l~~~-~~v~~~d~~G~G~s~~----- 92 (322)
.++.|..++..+ .+..+||++|++++++.. .|..++ ..|..+ |.||++|..|-|.|+.
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 578899986533 345799999999885411 166665 235555 9999999998765321
Q ss_pred -------C---------CCCCCHHHHHHHHHHHHHHhccccEE-EEEEchhHHHHHHHHHhcccccceeeeeccCCCCCc
Q 042555 93 -------T---------RADRTESFQARCVMRLMEVFCVKRMS-LVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEE 155 (322)
Q Consensus 93 -------~---------~~~~~~~~~~~~~~~~l~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 155 (322)
+ .+.+++.++++++.++++++++++++ ++||||||++++.+|.++|++|+++|++++......
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~ 200 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDA 200 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCCh
Confidence 1 23478999999999999999999986 999999999999999999999999999987654432
Q ss_pred cc---ccc----CCCCccccchhhhcccCCCh-HHHH---H----------HHHhhhcCCCCCCC------CCchhHHhh
Q 042555 156 ND---MEE----GLFPVTDIDEAANILVPQTP-DKLR---D----------LIRFSFVNSKPVRG------VPSCFLTDF 208 (322)
Q Consensus 156 ~~---~~~----~~~~~~~~~~~~~~~~~~~~-~~~~---~----------~~~~~~~~~~~~~~------~~~~~~~~~ 208 (322)
.. +.. ....-..+..-... ....+ ..+. . .+...+........ ......+.+
T Consensus 201 ~~~~~~~~~~~~ai~~dp~~~~G~y~-~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~y 279 (389)
T PRK06765 201 WTSVNVLQNWAEAIRLDPNWKGGKYY-GEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKE 279 (389)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCC-CCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHH
Confidence 21 000 00000000000000 00000 0000 0 00111110000000 000111222
Q ss_pred HHHhh-----hhhhhhHHHHHHHHhcc-------cccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc---CCcEEE
Q 042555 209 IDVMC-----TEYVQEKRELIETILKD-------RKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG---ESARLV 273 (322)
Q Consensus 209 ~~~~~-----~~~~~~~~~~~~~~~~~-------~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~ 273 (322)
+.... .........+...+... +....+.++++|+++|+|++|.++|++..+++.+.++ ++++++
T Consensus 280 l~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~ 359 (389)
T PRK06765 280 INKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVY 359 (389)
T ss_pred HHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEE
Confidence 22211 11112222233333222 1344577899999999999999999999999999883 268999
Q ss_pred EEcC-CCccccccChHHHHHHHHHHHhc
Q 042555 274 IIEN-TGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 274 ~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
++++ +||+.++++|+++.+.|.+||++
T Consensus 360 ~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 360 EIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9985 89999999999999999999975
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=1.4e-26 Score=186.10 Aligned_cols=256 Identities=16% Similarity=0.179 Sum_probs=158.0
Q ss_pred EEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcH-------------------------HHHHhhhcCC-ceEEee
Q 042555 29 TDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQY-------------------------GEFLRHFTPR-FNVYVP 82 (322)
Q Consensus 29 i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-------------------------~~~~~~l~~~-~~v~~~ 82 (322)
+...||.+|+++.+.+. ..+.+|+++||++.+..+.| ..+++.|.+. |.|+++
T Consensus 2 ~~~~~g~~l~~~~~~~~-~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~ 80 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGL 80 (332)
T ss_pred ccCCCCCeEEEeeeecc-CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEe
Confidence 34468999998887643 34559999999999885222 4578888776 999999
Q ss_pred cCCCCCCCCCCC--C--CCCHHHHHHHHHHHHHHhc------------------------cccEEEEEEchhHHHHHHHH
Q 042555 83 DLVFFGESYTTR--A--DRTESFQARCVMRLMEVFC------------------------VKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 83 d~~G~G~s~~~~--~--~~~~~~~~~~~~~~l~~l~------------------------~~~~~lvGhS~Gg~~a~~~a 134 (322)
|+||||.|.... . ..+++++++|+..+++... ..+++++||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999999998541 1 2478889999999987642 34799999999999999998
Q ss_pred Hhccc--------ccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCC--CCCCC--Cc
Q 042555 135 AQFPK--------VLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSK--PVRGV--PS 202 (322)
Q Consensus 135 ~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~ 202 (322)
..+++ .++++|+++|........ ......... . ...+...+........ ..... ..
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~-~~~~~~~~~---~--------~~~l~~~~~~~~p~~~~~~~~~~~~~~ 228 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISIKSVG-SDDSFKFKY---F--------YLPVMNFMSRVFPTFRISKKIRYEKSP 228 (332)
T ss_pred HHhccccccccccccceEEEeccceEEeccc-CCCcchhhh---h--------HHHHHHHHHHHCCcccccCccccccCh
Confidence 76542 589999888876322100 000000000 0 0000000000000000 00000 00
Q ss_pred hhHHhhHHHhh----hhhhhhHHHHHHHHhcccccCCCCCC--CCcEEEEEeCCCCCCChHHHHHHHHHhc-CCcEEEEE
Q 042555 203 CFLTDFIDVMC----TEYVQEKRELIETILKDRKFCNLPKI--AQQTLIIWGEQDQIFPLELGHRLKRHIG-ESARLVII 275 (322)
Q Consensus 203 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~ 275 (322)
...+.+..... .........++..... ....+..+ ++|+|+++|++|.+++++..+.+++... ++++++++
T Consensus 229 ~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~ 306 (332)
T TIGR01607 229 YVNDIIKFDKFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTL 306 (332)
T ss_pred hhhhHHhcCccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEE
Confidence 00111100000 0011111122221111 11233344 7899999999999999999999887763 57899999
Q ss_pred cCCCccccccC-hHHHHHHHHHHHh
Q 042555 276 ENTGHAVNLEK-PKELLKHLKSFLI 299 (322)
Q Consensus 276 ~~~gH~~~~~~-~~~~~~~i~~fl~ 299 (322)
++++|.++.|. .+++.+.|.+||+
T Consensus 307 ~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 307 EDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999999885 6889999999985
No 49
>PRK13604 luxD acyl transferase; Provisional
Probab=99.95 E-value=3.9e-26 Score=175.60 Aligned_cols=221 Identities=14% Similarity=0.219 Sum_probs=148.1
Q ss_pred eEEEEEeCCceEEEEEecCCC---CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCC-CCCCCCCCCCCH
Q 042555 25 RSTSTDLGDGTVMQCWVPKFP---KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFF-GESYTTRADRTE 99 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~ 99 (322)
..+.+.+.||.+|+.+...|. ..+.++||++||+++... .+..+++.|.++ |.|+.+|+||+ |.|++.....+.
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~-~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMD-HFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChH-HHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 456788899999998887664 245579999999999885 499999999988 99999999988 999876544454
Q ss_pred HHHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhccc
Q 042555 100 SFQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 100 ~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (322)
.....|+.++++.+ +.+++.|+||||||.+++..|... .++++|+.+|.......
T Consensus 89 s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~-------------------- 146 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDT-------------------- 146 (307)
T ss_pred cccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHH--------------------
Confidence 44567776666655 557899999999999997777643 39999999987653311
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchh--------HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEe
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCF--------LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWG 248 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g 248 (322)
++..+...+. ..+....+... ...+............ ......+.++++|+|+|||
T Consensus 147 ------l~~~~~~~~~-~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~---------~s~i~~~~~l~~PvLiIHG 210 (307)
T PRK13604 147 ------LERALGYDYL-SLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTL---------DSTINKMKGLDIPFIAFTA 210 (307)
T ss_pred ------HHHhhhcccc-cCcccccccccccccccccHHHHHHHHHhcCcccc---------ccHHHHHhhcCCCEEEEEc
Confidence 1111110000 00000000000 0011110000000000 0012335567899999999
Q ss_pred CCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccc
Q 042555 249 EQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNL 284 (322)
Q Consensus 249 ~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~ 284 (322)
++|.++|.+.++++++.+. .+++++++||++|.+..
T Consensus 211 ~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 211 NNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred CCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 9999999999999999884 47999999999998643
No 50
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=2.9e-26 Score=174.09 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=164.7
Q ss_pred CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----cccE
Q 042555 45 PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC----VKRM 118 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~----~~~~ 118 (322)
+....|+++++||+.|+.+ .|+.+...|++. ..|+++|.|.||.|... ...+...+++|+..+++..+ ..++
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~-Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-~~h~~~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKE-NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-TVHNYEAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred ccCCCCceEEecccccCCC-CHHHHHHHhcccccCceEEEecccCCCCccc-cccCHHHHHHHHHHHHHHcccccccCCc
Confidence 3467899999999999997 699999999988 89999999999999755 45669999999999999884 5789
Q ss_pred EEEEEchhH-HHHHHHHHhcccccceeeeeccCCCCCcccccc---CCCCccccchhhhcccCCChHHHHHHHHhhhcCC
Q 042555 119 SLVGISYGG-FVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEE---GLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNS 194 (322)
Q Consensus 119 ~lvGhS~Gg-~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (322)
.++|||||| .+++..+..+|+.+..+|+++..+......... -+............ .....+....+.. ..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~-~~~rke~~~~l~~-~~--- 200 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGV-SRGRKEALKSLIE-VG--- 200 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccc-cccHHHHHHHHHH-Hh---
Confidence 999999999 888888889999999999998665321111000 00000000000000 0111111111111 00
Q ss_pred CCCCCCCchhHHhhHHHhh-----------hhhhhhHHHHHHHHhcccccCCC--CCCCCcEEEEEeCCCCCCChHHHHH
Q 042555 195 KPVRGVPSCFLTDFIDVMC-----------TEYVQEKRELIETILKDRKFCNL--PKIAQQTLIIWGEQDQIFPLELGHR 261 (322)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~g~~D~~~~~~~~~~ 261 (322)
.+.....++.... ..+......++..+........+ .....||+++.|.++..++.+.-..
T Consensus 201 ------~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~ 274 (315)
T KOG2382|consen 201 ------FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPR 274 (315)
T ss_pred ------cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHH
Confidence 0001111111000 11122233333332111123333 5668899999999999999999999
Q ss_pred HHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 262 LKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 262 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+.+.+ ++++++.++++||+++.|+|+++.+.|.+|+.++
T Consensus 275 ~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 275 MEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999 9999999999999999999999999999999765
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=4.2e-26 Score=183.46 Aligned_cols=270 Identities=17% Similarity=0.089 Sum_probs=153.0
Q ss_pred CceEEEEEeCCceEEEEEecC--CCCCCCCeEEEEcCCCCchhh-cHHHHHhhhcCC-ceEEeecCCCCCCCCCCC-CCC
Q 042555 23 GLRSTSTDLGDGTVMQCWVPK--FPKILKPNLLLLHGFGANAMW-QYGEFLRHFTPR-FNVYVPDLVFFGESYTTR-ADR 97 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~--~~~~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~-~~~ 97 (322)
..+.+.++++||..+.+.... +....+|+||++||++++... .+..++..|.+. |+|+++|+||||.+.... ..+
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 445677888999776544321 123457899999999887432 245677888777 999999999999875431 111
Q ss_pred ---CHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccc--cceeeeeccCCCCCccccccCCCCccccchhh
Q 042555 98 ---TESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKV--LEKVVLCCSGVCLEENDMEEGLFPVTDIDEAA 172 (322)
Q Consensus 98 ---~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (322)
..++....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++....... ..+..... ....
T Consensus 110 ~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~--~~~~~~~~-~~~~ 186 (324)
T PRK10985 110 HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACS--YRMEQGFS-RVYQ 186 (324)
T ss_pred CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHH--HHHhhhHH-HHHH
Confidence 2233222222233345667899999999999988888887543 89999999876533211 00000000 0000
Q ss_pred hcccCCChHHHHHHHHhhhcCCCCCCCCCchh------HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEE
Q 042555 173 NILVPQTPDKLRDLIRFSFVNSKPVRGVPSCF------LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLII 246 (322)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 246 (322)
..+ ...+..................... ..++-+.. .............+........+.++++|+++|
T Consensus 187 ~~l----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~-~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii 261 (324)
T PRK10985 187 RYL----LNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLI-TARIHGFADAIDYYRQCSALPLLNQIRKPTLII 261 (324)
T ss_pred HHH----HHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhh-eeccCCCCCHHHHHHHCChHHHHhCCCCCEEEE
Confidence 000 0001111100000000000001000 01110011 111111111112222222445678899999999
Q ss_pred EeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccCh-----HHHHHHHHHHHhcc
Q 042555 247 WGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKP-----KELLKHLKSFLIVD 301 (322)
Q Consensus 247 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 301 (322)
+|++|++++.+....+.+.. ++.++++++++||+.+++.. .-.-+.+.+|+...
T Consensus 262 ~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPESLP-PNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred ecCCCCCCChhhChHHHHhC-CCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 99999999988888776666 88999999999999998742 23456677777543
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=1.7e-24 Score=169.92 Aligned_cols=243 Identities=14% Similarity=0.076 Sum_probs=143.6
Q ss_pred CceEEEEEecCCCCCCCCeEEEEcCCCC----chhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHH
Q 042555 33 DGTVMQCWVPKFPKILKPNLLLLHGFGA----NAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVM 107 (322)
Q Consensus 33 ~g~~l~~~~~~~~~~~~~~vv~~hG~~~----~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 107 (322)
+|.++.-....|.+.++++||++||++. +.. .|..+++.|++. |.|+++|+||||.|... ..+..++.+|+.
T Consensus 10 ~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~-~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~--~~~~~~~~~d~~ 86 (274)
T TIGR03100 10 EGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHR-QFVLLARRLAEAGFPVLRFDYRGMGDSEGE--NLGFEGIDADIA 86 (274)
T ss_pred CCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchh-HHHHHHHHHHHCCCEEEEeCCCCCCCCCCC--CCCHHHHHHHHH
Confidence 5655655444444445678888888653 232 366788899876 99999999999999754 246777788888
Q ss_pred HHHHHh-----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHH
Q 042555 108 RLMEVF-----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDK 182 (322)
Q Consensus 108 ~~l~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (322)
++++.+ +.++++++|||+||.+++.+|.. +.+|+++|+++|........... .. . ....... .....
T Consensus 87 ~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~-~~---~-~~~~~~~--~~~~~ 158 (274)
T TIGR03100 87 AAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS-RI---R-HYYLGQL--LSADF 158 (274)
T ss_pred HHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH-HH---H-HHHHHHH--hChHH
Confidence 888877 45779999999999999999865 46899999999864322110000 00 0 0000000 00000
Q ss_pred HHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-hh---hhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHH
Q 042555 183 LRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-YV---QEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLEL 258 (322)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~ 258 (322)
+ ...+. . .................. .. ....... ......+..+++|+++++|..|...+ ..
T Consensus 159 ~----~~~~~--g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~P~ll~~g~~D~~~~-~~ 224 (274)
T TIGR03100 159 W----RKLLS--G--EVNLGSSLRGLGDALLKARQKGDEVAHGGLA-----ERMKAGLERFQGPVLFILSGNDLTAQ-EF 224 (274)
T ss_pred H----HHhcC--C--CccHHHHHHHHHHHHHhhhhcCCCcccchHH-----HHHHHHHHhcCCcEEEEEcCcchhHH-HH
Confidence 0 00000 0 000000001110000000 00 0000000 01223345678999999999998863 22
Q ss_pred H------HHHHHHhc-CCcEEEEEcCCCccccccC-hHHHHHHHHHHHhc
Q 042555 259 G------HRLKRHIG-ESARLVIIENTGHAVNLEK-PKELLKHLKSFLIV 300 (322)
Q Consensus 259 ~------~~~~~~~~-~~~~~~~~~~~gH~~~~~~-~~~~~~~i~~fl~~ 300 (322)
. ..+.+.+. ++++++.+++++|++..+. ++++.+.|.+||++
T Consensus 225 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 225 ADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 2 44444443 7899999999999985654 58999999999953
No 53
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=2.4e-24 Score=174.89 Aligned_cols=277 Identities=16% Similarity=0.175 Sum_probs=168.8
Q ss_pred CCCceEEEEEeCCceEEEEEecCCC-----CCCCCeEEEEcCCCCchhhcHH------HHHhhhcCC-ceEEeecCCCCC
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPKFP-----KILKPNLLLLHGFGANAMWQYG------EFLRHFTPR-FNVYVPDLVFFG 88 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~~~-----~~~~~~vv~~hG~~~~~~~~~~------~~~~~l~~~-~~v~~~d~~G~G 88 (322)
..+.+++.|+++||..|...+.++. ...+|+|+++||+++++. .|. .++..|++. |+|+++|+||++
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~-~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGD-AWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccccc-ceeecCcccchHHHHHhCCCCcccccccccc
Confidence 6778999999999998988775422 134689999999988875 463 355567766 999999999987
Q ss_pred CCCC-------CC--CCCCHHHHH-HHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhccc---ccceeeeeccCCC
Q 042555 89 ESYT-------TR--ADRTESFQA-RCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPK---VLEKVVLCCSGVC 152 (322)
Q Consensus 89 ~s~~-------~~--~~~~~~~~~-~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~~ 152 (322)
.|.+ +. ..+++++++ .|+.++++.+ ..++++++|||+||.+++.++ .+|+ +|+++++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 6532 11 146788888 7999999986 347999999999999998555 5675 6888899988765
Q ss_pred CCccc--cccCCCCccccchhh-----hcccCCChHHHHHHHH-------------hhhcCCCCCCCCCchhHHhhHHHh
Q 042555 153 LEEND--MEEGLFPVTDIDEAA-----NILVPQTPDKLRDLIR-------------FSFVNSKPVRGVPSCFLTDFIDVM 212 (322)
Q Consensus 153 ~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 212 (322)
..... +...+.. ....... ..+.+. ...+..+.. ..+.+.. ..+.......+....
T Consensus 199 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~C~~~~~c~~~~~~~~g~~--~~~n~~~~~~~~~~~ 274 (395)
T PLN02872 199 LDHVTAPLVLRMVF-MHLDQMVVAMGIHQLNFR-SDVLVKLLDSICEGHMDCNDLLTSITGTN--CCFNASRIDYYLEYE 274 (395)
T ss_pred hccCCCHHHHHHHH-HhHHHHHHHhcCceecCC-cHHHHHHHHHHccCchhHHHHHHHHhCCC--cccchhhhhHHHhcC
Confidence 43211 0000000 0000000 000011 011111111 0011000 011111111111100
Q ss_pred -hhhhhhhHHHHHHHHh-------------------ccc-ccCCCCCC--CCcEEEEEeCCCCCCChHHHHHHHHHhcCC
Q 042555 213 -CTEYVQEKRELIETIL-------------------KDR-KFCNLPKI--AQQTLIIWGEQDQIFPLELGHRLKRHIGES 269 (322)
Q Consensus 213 -~~~~~~~~~~~~~~~~-------------------~~~-~~~~l~~i--~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~ 269 (322)
...+.+....+.+... ... +.-.+.++ ++|+++++|++|.+++++.++.+.+.+ ++
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~L-p~ 353 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAEL-PS 353 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHC-CC
Confidence 0001111111111111 101 33456677 579999999999999999999999999 55
Q ss_pred -cEEEEEcCCCccc---cccChHHHHHHHHHHHhccCCC
Q 042555 270 -ARLVIIENTGHAV---NLEKPKELLKHLKSFLIVDSSL 304 (322)
Q Consensus 270 -~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~~~~ 304 (322)
.+++.+++++|.. ..+.++++.+.|.+|+++..+.
T Consensus 354 ~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 354 KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 6888999999964 4478999999999999865543
No 54
>PRK10566 esterase; Provisional
Probab=99.93 E-value=3.6e-23 Score=161.22 Aligned_cols=214 Identities=19% Similarity=0.272 Sum_probs=131.4
Q ss_pred EEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCH-------HHHHHHHHH
Q 042555 37 MQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTE-------SFQARCVMR 108 (322)
Q Consensus 37 l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-------~~~~~~~~~ 108 (322)
++|...+.++++.|+||++||++++.. .|..+++.|++. |.|+++|+||||.+......... ....+++.+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKL-VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPT 93 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccc-hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHH
Confidence 444443222345789999999999885 599999999887 99999999999986432111111 122344444
Q ss_pred HHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHH
Q 042555 109 LMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDK 182 (322)
Q Consensus 109 ~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (322)
+++.+ +.++++++|||+||.+++.++.++|+....++++++.... .
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 145 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFT----------------------------S 145 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHH----------------------------H
Confidence 44443 3478999999999999999999988643344444332100 0
Q ss_pred HHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCC-CCcEEEEEeCCCCCCChHHHHH
Q 042555 183 LRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKI-AQQTLIIWGEQDQIFPLELGHR 261 (322)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~g~~D~~~~~~~~~~ 261 (322)
... ..+. ......+.. .. ........+...+....+.++ ++|+|+++|++|.++|.+..+.
T Consensus 146 ~~~---~~~~--~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~ 207 (249)
T PRK10566 146 LAR---TLFP--PLIPETAAQ-QA------------EFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLR 207 (249)
T ss_pred HHH---Hhcc--ccccccccc-HH------------HHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHH
Confidence 000 0000 000000000 00 000011111111122234455 6899999999999999999999
Q ss_pred HHHHhcC-----CcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 262 LKRHIGE-----SARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 262 ~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+.+.+.. +++++.++++||.+. + ...+.+.+||+++
T Consensus 208 l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 208 LQQALRERGLDKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHhcCCCcceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 9988842 357788999999863 3 4568889999754
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.93 E-value=5e-26 Score=175.54 Aligned_cols=216 Identities=27% Similarity=0.279 Sum_probs=133.8
Q ss_pred ceEEeecCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 77 FNVYVPDLVFFGESYT----TRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~----~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
|+|+++|+||+|.|++ ....++.+++++++..+++.++.++++++||||||.+++.+|..+|++|+++|+++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999995 267789999999999999999999999999999999999999999999999999998630
Q ss_pred ----CCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhh-hhhhHH----HH
Q 042555 153 ----LEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTE-YVQEKR----EL 223 (322)
Q Consensus 153 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~ 223 (322)
......................................... .. .................. ...... ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAY-DR-EFVEDFLKQFQSQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHTHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeec-cC-ccccchhhccchhhhhHHHHHHHHhhhcccc
Confidence 00000000000000000000000000000000000000000 00 000000000000000000 000000 01
Q ss_pred HHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHH
Q 042555 224 IETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLK 295 (322)
Q Consensus 224 ~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 295 (322)
.......+....+.++++|+++++|++|.++|++....+.+.+ ++.++++++++||+.++++|+++.+.|.
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 1122222244566779999999999999999999999999999 9999999999999999999999998875
No 56
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.92 E-value=3.9e-25 Score=162.19 Aligned_cols=268 Identities=16% Similarity=0.153 Sum_probs=160.4
Q ss_pred EEEEEeCCce-EEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCC-CCCCCHHH
Q 042555 26 STSTDLGDGT-VMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTT-RADRTESF 101 (322)
Q Consensus 26 ~~~i~~~~g~-~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~-~~~~~~~~ 101 (322)
...|.++++. ++..+...+....+|.++++||+|.+. .+|..++..|... .+|+++|+||||++.-. ....+.+.
T Consensus 50 kedv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~-LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT 128 (343)
T KOG2564|consen 50 KEDVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSA-LSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLET 128 (343)
T ss_pred ccccccCCCcceEEEEEecCCCCCccEEEEeecCcccc-hhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHH
Confidence 3445553332 455555544567889999999999998 5899999999887 88899999999999754 56789999
Q ss_pred HHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhc--ccccceeeeeccCCCCCccccccCCCCccccchhhhccc
Q 042555 102 QARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQF--PKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 102 ~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (322)
+++|+.++++.+ ...+++||||||||.+|.+.|... |. +.+++.++..-..... .......+..-.....
T Consensus 129 ~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAme----AL~~m~~fL~~rP~~F 203 (343)
T KOG2564|consen 129 MSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAME----ALNSMQHFLRNRPKSF 203 (343)
T ss_pred HHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHH----HHHHHHHHHhcCCccc
Confidence 999999999987 346899999999999999887654 65 8899888753211100 0000000000000111
Q ss_pred CCChHHHHHHHHhhhcCCCCC--CCCCchhHHhhH--HHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCC
Q 042555 177 PQTPDKLRDLIRFSFVNSKPV--RGVPSCFLTDFI--DVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQ 252 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~ 252 (322)
......+..-++....+.... -.++..+...-. ....+........++..+... ....+-...+|-++|.+..|.
T Consensus 204 ~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~g-LS~~Fl~~p~~klLilAg~d~ 282 (343)
T KOG2564|consen 204 KSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKG-LSDKFLGLPVPKLLILAGVDR 282 (343)
T ss_pred cchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhh-hhhHhhCCCccceeEEecccc
Confidence 111111111111111100000 001111110000 001111222233334443333 333444567887888777776
Q ss_pred CCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCCC
Q 042555 253 IFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSSL 304 (322)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 304 (322)
+-..-..-++ ....++.+++.+||+.+.+.|..++..+..|+.++.-.
T Consensus 283 LDkdLtiGQM----QGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~~~ 330 (343)
T KOG2564|consen 283 LDKDLTIGQM----QGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNRFA 330 (343)
T ss_pred cCcceeeeee----ccceeeeeecccCceeccCCcchHHHHHHHHHhhhccc
Confidence 5322111111 15678999999999999999999999999999887633
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.92 E-value=4.1e-23 Score=152.18 Aligned_cols=183 Identities=19% Similarity=0.201 Sum_probs=125.8
Q ss_pred CeEEEEcCCCCchhhcHHH--HHhhhcC---CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEc
Q 042555 50 PNLLLLHGFGANAMWQYGE--FLRHFTP---RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGIS 124 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~--~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS 124 (322)
|+||++||++++.. +|.. +...+.+ +|+|+++|+|||| ++.++++.+++++++.++++++|||
T Consensus 2 p~illlHGf~ss~~-~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~~~~~~~lvG~S 69 (190)
T PRK11071 2 STLLYLHGFNSSPR-SAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEHGGDPLGLVGSS 69 (190)
T ss_pred CeEEEECCCCCCcc-hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHcCCCCeEEEEEC
Confidence 68999999999996 5763 4455543 5999999999985 4678899999999999999999999
Q ss_pred hhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchh
Q 042555 125 YGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCF 204 (322)
Q Consensus 125 ~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (322)
+||.+++.+|.++|. ++|+++|+..... ......... . .......-..
T Consensus 70 ~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~--------------------------~~~~~~~~~-~--~~~~~~~~~~ 117 (190)
T PRK11071 70 LGGYYATWLSQCFML---PAVVVNPAVRPFE--------------------------LLTDYLGEN-E--NPYTGQQYVL 117 (190)
T ss_pred HHHHHHHHHHHHcCC---CEEEECCCCCHHH--------------------------HHHHhcCCc-c--cccCCCcEEE
Confidence 999999999999983 4688888653110 011110000 0 0000000000
Q ss_pred HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccc
Q 042555 205 LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNL 284 (322)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 284 (322)
.. ..+......+. ..+. ..+|+++++|++|.++|.+.+.++++.. +.++++|++|.+
T Consensus 118 ~~---------------~~~~d~~~~~~-~~i~-~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f-- 174 (190)
T PRK11071 118 ES---------------RHIYDLKVMQI-DPLE-SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAF-- 174 (190)
T ss_pred cH---------------HHHHHHHhcCC-ccCC-ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcch--
Confidence 01 11111111111 2233 6778999999999999999999998754 677889999988
Q ss_pred cChHHHHHHHHHHHh
Q 042555 285 EKPKELLKHLKSFLI 299 (322)
Q Consensus 285 ~~~~~~~~~i~~fl~ 299 (322)
++.+++.+.+.+|+.
T Consensus 175 ~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 175 VGFERYFNQIVDFLG 189 (190)
T ss_pred hhHHHhHHHHHHHhc
Confidence 555888999999975
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.92 E-value=8.1e-23 Score=170.44 Aligned_cols=233 Identities=14% Similarity=0.096 Sum_probs=145.4
Q ss_pred CCCeEEEEcCCCCchhhcHH-----HHHhhhcCC-ceEEeecCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhccccEE
Q 042555 48 LKPNLLLLHGFGANAMWQYG-----EFLRHFTPR-FNVYVPDLVFFGESYTT--RADRTESFQARCVMRLMEVFCVKRMS 119 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~-----~~~~~l~~~-~~v~~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~l~~l~~~~~~ 119 (322)
.++|||++||+.... +.++ .+++.|.++ |+|+++|++|+|.+... ...+..+.+.+.+..+++.++.++++
T Consensus 187 ~~~PlLiVp~~i~k~-yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKY-YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVN 265 (532)
T ss_pred CCCcEEEECcccccc-eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeE
Confidence 578999999997666 4454 688888877 99999999999988654 22344445566677777778889999
Q ss_pred EEEEchhHHHHH----HHHHhc-ccccceeeeeccCCCCCccccccCCCCccccchh------------------hhccc
Q 042555 120 LVGISYGGFVGY----SLAAQF-PKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEA------------------ANILV 176 (322)
Q Consensus 120 lvGhS~Gg~~a~----~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~ 176 (322)
++|||+||.++. .+++.+ +++|++++++++..++........+.....+... ...+.
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 345555 7899999999998877643322111111111000 00110
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcc-----------cccCCCCCCCCcEEE
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKD-----------RKFCNLPKIAQQTLI 245 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~Pvl~ 245 (322)
.....+...+........+. ......+.....+-.......++..+... +....+.+|++|+++
T Consensus 346 -p~~l~w~~~v~~yl~g~~~~----~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLv 420 (532)
T TIGR01838 346 -ENDLIWNYYVDNYLKGKSPV----PFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYI 420 (532)
T ss_pred -hhhHHHHHHHHHHhcCCCcc----chhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEE
Confidence 00011111121111111110 01111111111111222222233222222 145678899999999
Q ss_pred EEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccCh
Q 042555 246 IWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKP 287 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 287 (322)
++|++|.++|++.+..+.+.+ ++.+.++++++||..++++|
T Consensus 421 V~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 421 IATREDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred EeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCC
Confidence 999999999999999999999 78888999999999887764
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=3e-23 Score=168.91 Aligned_cols=262 Identities=18% Similarity=0.216 Sum_probs=152.7
Q ss_pred EeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcH-----HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH
Q 042555 30 DLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQY-----GEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQA 103 (322)
Q Consensus 30 ~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 103 (322)
-..++..+..+....+...+++||++||+..+. +.+ ..+++.|.++ |+|+++|++|+|.+.. ..++++++
T Consensus 43 ~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~-~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~---~~~~~d~~ 118 (350)
T TIGR01836 43 YREDKVVLYRYTPVKDNTHKTPLLIVYALVNRP-YMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR---YLTLDDYI 118 (350)
T ss_pred EEcCcEEEEEecCCCCcCCCCcEEEeccccccc-eeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh---cCCHHHHH
Confidence 333555665554321223456899999986544 333 5788888887 9999999999998753 34666665
Q ss_pred HH-HHH----HHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccc-ccCCCCccccchhhhcccC
Q 042555 104 RC-VMR----LMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDM-EEGLFPVTDIDEAANILVP 177 (322)
Q Consensus 104 ~~-~~~----~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 177 (322)
.+ +.+ +.+..+.++++++||||||.+++.++..+|++|+++|+++++........ ...................
T Consensus 119 ~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGN 198 (350)
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCC
Confidence 33 444 44445778999999999999999999999999999999999886543210 0011111111111111100
Q ss_pred CChHHHHHHHHhhhcCCCCC------------CCCCchhHHhhHH--H-hh---hhhhhhHHHHHHHHhccc--------
Q 042555 178 QTPDKLRDLIRFSFVNSKPV------------RGVPSCFLTDFID--V-MC---TEYVQEKRELIETILKDR-------- 231 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~-------- 231 (322)
.........+. .. .+. ..........+.. . .. .........++..+....
T Consensus 199 ~p~~~~~~~f~-~l---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~ 274 (350)
T TIGR01836 199 IPGELLNLTFL-ML---KPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVE 274 (350)
T ss_pred CCHHHHHHHHH-hc---CcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeE
Confidence 00000000000 00 000 0001111111110 0 00 001111112222111111
Q ss_pred ---ccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccccC---hHHHHHHHHHHHhc
Q 042555 232 ---KFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLEK---PKELLKHLKSFLIV 300 (322)
Q Consensus 232 ---~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~ 300 (322)
....+.++++|+++++|++|.++|++..+.+.+.++ .+.++++++ +||..++.. ++++.+.|.+||.+
T Consensus 275 ~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 275 IGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred ECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 123467889999999999999999999999999884 245677776 689887654 47899999999975
No 60
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=9.1e-23 Score=149.57 Aligned_cols=217 Identities=23% Similarity=0.293 Sum_probs=155.9
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHH
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTES 100 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~ 100 (322)
..+-..+++..|..+......+.....+++++.||...+.. ....+...|+.. ++++++|++|+|.|.+.......-
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y 112 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLY 112 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH-HHHHHHHHHhhcccceEEEEecccccccCCCcccccch
Confidence 45566677777766654444334445689999999977765 455666667664 999999999999999876666555
Q ss_pred HHHHHHHHHHHHhc--cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCC
Q 042555 101 FQARCVMRLMEVFC--VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQ 178 (322)
Q Consensus 101 ~~~~~~~~~l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (322)
+.++.+.++++.-. .++++|+|+|+|+..++.+|++.| ++++||.+|......-
T Consensus 113 ~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv---------------------- 168 (258)
T KOG1552|consen 113 ADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRV---------------------- 168 (258)
T ss_pred hhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhh----------------------
Confidence 55555555555443 588999999999999999999998 9999999986532211
Q ss_pred ChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHH
Q 042555 179 TPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLEL 258 (322)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~ 258 (322)
.+..... . .....+ ...+.++.|+||+|++||++|.+++...
T Consensus 169 -----------~~~~~~~----~-~~~d~f----------------------~~i~kI~~i~~PVLiiHgtdDevv~~sH 210 (258)
T KOG1552|consen 169 -----------AFPDTKT----T-YCFDAF----------------------PNIEKISKITCPVLIIHGTDDEVVDFSH 210 (258)
T ss_pred -----------hccCcce----E-Eeeccc----------------------cccCcceeccCCEEEEecccCceecccc
Confidence 0000000 0 000000 0245677889999999999999999999
Q ss_pred HHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhccCC
Q 042555 259 GHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~ 303 (322)
..++++......+-.++.|+||.-..-. .++.+.+.+|+....+
T Consensus 211 g~~Lye~~k~~~epl~v~g~gH~~~~~~-~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 211 GKALYERCKEKVEPLWVKGAGHNDIELY-PEYIEHLRRFISSVLP 254 (258)
T ss_pred cHHHHHhccccCCCcEEecCCCcccccC-HHHHHHHHHHHHHhcc
Confidence 9999999944458888999999865554 4577889999876544
No 61
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=8e-23 Score=144.45 Aligned_cols=230 Identities=16% Similarity=0.196 Sum_probs=158.8
Q ss_pred cCCCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCC
Q 042555 20 SNAGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADR 97 (322)
Q Consensus 20 ~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~ 97 (322)
...+.++..+.+.|..+++-+... ...+.|+++++||..|+..+ .-+++.-+-.+ .+|+.+++||+|.|.+.+...
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~-~E~S~pTlLyfh~NAGNmGh-r~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~ 127 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLML-SESSRPTLLYFHANAGNMGH-RLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEE 127 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeec-ccCCCceEEEEccCCCcccc-hhhHHHHHHHHcCceEEEEEeeccccCCCCcccc
Confidence 344567778888999999866654 34588999999999998864 55666555444 899999999999998775544
Q ss_pred CHHHHHHHHHHHHHH---hccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 98 TESFQARCVMRLMEV---FCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 98 ~~~~~~~~~~~~l~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
.+.-.++.+.+.+.. ++..++++.|-|.||.+|..+|++..+++.++|+-++....+... ...
T Consensus 128 GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~--------------i~~ 193 (300)
T KOG4391|consen 128 GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA--------------IPL 193 (300)
T ss_pred ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhh--------------hhe
Confidence 443333333333322 244689999999999999999999999999999988766443211 000
Q ss_pred ccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCC
Q 042555 175 LVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIF 254 (322)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~ 254 (322)
..+... +.+....+ + + .+. ....+...+.|.|+|.|.+|.++
T Consensus 194 v~p~~~----k~i~~lc~-------------k---------n---------~~~---S~~ki~~~~~P~LFiSGlkDelV 235 (300)
T KOG4391|consen 194 VFPFPM----KYIPLLCY-------------K---------N---------KWL---SYRKIGQCRMPFLFISGLKDELV 235 (300)
T ss_pred eccchh----hHHHHHHH-------------H---------h---------hhc---chhhhccccCceEEeecCccccC
Confidence 000000 00000000 0 0 000 11223356889999999999999
Q ss_pred ChHHHHHHHHHhc-CCcEEEEEcCCCccccccChHHHHHHHHHHHhccCCC
Q 042555 255 PLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDSSL 304 (322)
Q Consensus 255 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~~~ 304 (322)
|+.+++.+++..+ ...++..+|++.|.-.+-. +.+.+.|.+||.+....
T Consensus 236 PP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 236 PPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAEVVKS 285 (300)
T ss_pred CcHHHHHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHHhccC
Confidence 9999999999985 4578999999999865543 56789999999876553
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=3.4e-21 Score=152.19 Aligned_cols=259 Identities=24% Similarity=0.307 Sum_probs=151.8
Q ss_pred CceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC---ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 042555 33 DGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR---FNVYVPDLVFFGESYTTRADRTESFQARCVMRL 109 (322)
Q Consensus 33 ~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 109 (322)
.+..+.|...+.. +|+++++||++++.. .|......+... |+++.+|+||||.|. .. .......++++..+
T Consensus 8 ~~~~~~~~~~~~~---~~~i~~~hg~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~ 81 (282)
T COG0596 8 DGVRLAYREAGGG---GPPLVLLHGFPGSSS-VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAAL 81 (282)
T ss_pred CCeEEEEeecCCC---CCeEEEeCCCCCchh-hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHH
Confidence 4455566665322 669999999999885 477633333222 899999999999997 22 34555559999999
Q ss_pred HHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCC-CCccccchhhhcccCCC-hHHHHHHH
Q 042555 110 MEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGL-FPVTDIDEAANILVPQT-PDKLRDLI 187 (322)
Q Consensus 110 l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 187 (322)
++.++..+++++|||+||.+++.++.++|+++++++++++............. ........... ..... ........
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALAD-LLLGLDAAAFAALL 160 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhh-hhhccchhhhhhhh
Confidence 99999888999999999999999999999999999999987652111000000 00000000000 00000 00000000
Q ss_pred Hhhh-cCCCC-------CCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHH
Q 042555 188 RFSF-VNSKP-------VRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELG 259 (322)
Q Consensus 188 ~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~ 259 (322)
.... ..... .......................................+..+++|+++++|++|.+.|....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~ 240 (282)
T COG0596 161 AALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELA 240 (282)
T ss_pred hcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHH
Confidence 0000 00000 000000000000000000000000000000000012345667889999999999977776666
Q ss_pred HHHHHHhcCC-cEEEEEcCCCccccccChHHHHHHHHHHHh
Q 042555 260 HRLKRHIGES-ARLVIIENTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 260 ~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
..+.+.+ ++ .++++++++||+++.++|+.+.+.+.+|+.
T Consensus 241 ~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 241 RRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred HHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 6677777 64 899999999999999999999988888553
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=3.4e-21 Score=175.98 Aligned_cols=251 Identities=18% Similarity=0.183 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCCCchhhcHHHH-----HhhhcCC-ceEEeecCCCCCCCCCCCC--CCCHHHHHHHHHHHHHH---hcc
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEF-----LRHFTPR-FNVYVPDLVFFGESYTTRA--DRTESFQARCVMRLMEV---FCV 115 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~-~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~l~~---l~~ 115 (322)
..+++|||+||++.+. +.|+.. ++.|.+. |+|+++|+ |.++.+.. ..++.+++..+.+.++. +..
T Consensus 65 ~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 65 PVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 3668999999999998 468864 7888776 99999995 66655422 35777777666666654 345
Q ss_pred ccEEEEEEchhHHHHHHHHHhc-ccccceeeeeccCCCCCccc---cccCC-CCccccc--hhhh--------------c
Q 042555 116 KRMSLVGISYGGFVGYSLAAQF-PKVLEKVVLCCSGVCLEEND---MEEGL-FPVTDID--EAAN--------------I 174 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~~---~~~~~-~~~~~~~--~~~~--------------~ 174 (322)
++++++||||||.+++.+++.+ +++|+++|+++++.+..... +.... .....+. .+.. .
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 7899999999999999998755 56899999999887653221 00000 0000000 0000 0
Q ss_pred ccCCC-hHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHh-h-hhhhhhHHHHHHHHhccc-----------ccCCCCCCC
Q 042555 175 LVPQT-PDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVM-C-TEYVQEKRELIETILKDR-----------KFCNLPKIA 240 (322)
Q Consensus 175 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-----------~~~~l~~i~ 240 (322)
+.+.. ......++.... .+....+++....+.... . .........+...+...+ ....+.+|+
T Consensus 221 l~p~~~~~~~~~~~~~l~---~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLH---DREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred cChhHHHHHHHHHHHhcC---chhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 00000 000111111111 111112222222222111 0 111112222333332110 113588999
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhcCCcEE-EEEcCCCcccccc---ChHHHHHHHHHHHhccCCCc
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIGESARL-VIIENTGHAVNLE---KPKELLKHLKSFLIVDSSLS 305 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~~~~~ 305 (322)
+|+|+|+|++|.++|++..+.+.+.+ ++.++ .+++++||+.++- .++++...|.+||.++....
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~~ 365 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGDG 365 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccCC
Confidence 99999999999999999999999999 88887 6789999998763 47889999999999876443
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.88 E-value=9.7e-22 Score=140.19 Aligned_cols=142 Identities=28% Similarity=0.352 Sum_probs=111.7
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHH-H-HhccccEEEEEEchhH
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLM-E-VFCVKRMSLVGISYGG 127 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l-~-~l~~~~~~lvGhS~Gg 127 (322)
+||++||++++.. .|..+++.|++. |.|+.+|+||+|.+.... .++++.+.+ . ..+.++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRR-DYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-------AVERVLADIRAGYPDPDRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTH-HHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-------HHHHHHHHHHHHHCTCCEEEEEEETHHH
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHHCCCEEEEEecCCCCccchhH-------HHHHHHHHHHhhcCCCCcEEEEEEccCc
Confidence 6899999999986 699999999988 999999999999883221 222222222 1 1266899999999999
Q ss_pred HHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHh
Q 042555 128 FVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTD 207 (322)
Q Consensus 128 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (322)
.+++.++.+. .+++++|++++...
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------------- 96 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG-------------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCccc-------------------------------------------------------
Confidence 9999999998 68999999987210
Q ss_pred hHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcc
Q 042555 208 FIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHA 281 (322)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 281 (322)
...+...++|+++++|++|.+++.+..+++.+.++.+.++++++|++|+
T Consensus 97 -------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0012244669999999999999999999999999557899999999995
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.88 E-value=7.9e-22 Score=149.64 Aligned_cols=272 Identities=18% Similarity=0.193 Sum_probs=159.4
Q ss_pred CCCceEEEEEeCCceEE-EEEecCCCCCCCCeEEEEcCCCCchhhcH-HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCC
Q 042555 21 NAGLRSTSTDLGDGTVM-QCWVPKFPKILKPNLLLLHGFGANAMWQY-GEFLRHFTPR-FNVYVPDLVFFGESYTTRADR 97 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l-~~~~~~~~~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~ 97 (322)
......+.+.++||..+ ..+...+....+|.||++||+.|+++..| +.+++.+.++ |.|+++++|||+.+....+..
T Consensus 46 ~~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~ 125 (345)
T COG0429 46 KVAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRL 125 (345)
T ss_pred ccccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcce
Confidence 34456678888877544 34444455667789999999988775433 5567777777 999999999999987543332
Q ss_pred CHHHHHHHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhccc--ccceeeeeccCCCCCccccccCCCCccccchh
Q 042555 98 TESFQARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK--VLEKVVLCCSGVCLEENDMEEGLFPVTDIDEA 171 (322)
Q Consensus 98 ~~~~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (322)
.-....+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+.+.... ...+.........
T Consensus 126 yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~--~~~l~~~~s~~ly 203 (345)
T COG0429 126 YHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEAC--AYRLDSGFSLRLY 203 (345)
T ss_pred ecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHH--HHHhcCchhhhhh
Confidence 2222335665555554 55789999999999554444444322 46677776665544211 0000000000000
Q ss_pred hhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhH--------HHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcE
Q 042555 172 ANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFI--------DVMCTEYVQEKRELIETILKDRKFCNLPKIAQQT 243 (322)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 243 (322)
...+...........+... ....+........ +..............+.+........+++|.+|+
T Consensus 204 ~r~l~~~L~~~~~~kl~~l------~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~Pt 277 (345)
T COG0429 204 SRYLLRNLKRNAARKLKEL------EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPT 277 (345)
T ss_pred HHHHHHHHHHHHHHHHHhc------CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccce
Confidence 0111000011111111111 0111111111110 1111122223334444555555778899999999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcccccc----ChH-HHHHHHHHHHhc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLE----KPK-ELLKHLKSFLIV 300 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~ 300 (322)
|+|++.+|++++++...+.....++++.+..-+.+||..++. +|. -..+.+.+|++.
T Consensus 278 Lii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 278 LIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred EEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 999999999999988887777555899999999999999887 333 345667777764
No 66
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=3e-20 Score=135.53 Aligned_cols=227 Identities=12% Similarity=0.111 Sum_probs=156.9
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhccccEEEEEEc
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLME-VFCVKRMSLVGIS 124 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~-~l~~~~~~lvGhS 124 (322)
.+..+.++++|-.|+++. .|+.+...|...+.++++++||+|..-......+++.+++.+..-+. ....+++.++|||
T Consensus 4 ~~~~~~L~cfP~AGGsa~-~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 4 PGARLRLFCFPHAGGSAS-LFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCCceEEEecCCCCCHH-HHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 456678999998888886 59999999988899999999999998777788899999999998888 4555799999999
Q ss_pred hhHHHHHHHHHhccc---ccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCC
Q 042555 125 YGGFVGYSLAAQFPK---VLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVP 201 (322)
Q Consensus 125 ~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (322)
|||++|.++|.+... ...++.+.+...+.... .. .+.......+.+.+..... .+
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~-------------~i~~~~D~~~l~~l~~lgG-------~p 140 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GK-------------QIHHLDDADFLADLVDLGG-------TP 140 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cC-------------CccCCCHHHHHHHHHHhCC-------CC
Confidence 999999999987532 25666666554431111 01 1111222222222222222 22
Q ss_pred chhHHhh-HHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCc
Q 042555 202 SCFLTDF-IDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGH 280 (322)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 280 (322)
..+.++- +..+.-...+.-......+ ....-..++||+.++.|++|..+..+....+.+..+...++.+++| ||
T Consensus 141 ~e~led~El~~l~LPilRAD~~~~e~Y----~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gH 215 (244)
T COG3208 141 PELLEDPELMALFLPILRADFRALESY----RYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GH 215 (244)
T ss_pred hHHhcCHHHHHHHHHHHHHHHHHhccc----ccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cc
Confidence 2222111 1111111111111122211 1222367899999999999999999999999999866899999986 99
Q ss_pred cccccChHHHHHHHHHHHhc
Q 042555 281 AVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 281 ~~~~~~~~~~~~~i~~fl~~ 300 (322)
+...++.+++.+.|.+.+..
T Consensus 216 Ffl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 216 FFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred eehhhhHHHHHHHHHHHhhh
Confidence 99999999999999988863
No 67
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.88 E-value=5.5e-20 Score=136.80 Aligned_cols=244 Identities=14% Similarity=0.135 Sum_probs=152.6
Q ss_pred EEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhcc
Q 042555 38 QCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT-RADRTESFQARCVMRLMEVFCV 115 (322)
Q Consensus 38 ~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~l~~ 115 (322)
.|.+..|.++...+||-+||.+|+.. +|..+.+.|.+. .++|.+++||+|.++.+ ...++..+....+.++++.+++
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~-DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHN-DFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI 102 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCcc-chhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC
Confidence 45565444445558999999999995 899999999988 99999999999999876 5678899999999999999987
Q ss_pred c-cEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCC
Q 042555 116 K-RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNS 194 (322)
Q Consensus 116 ~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (322)
+ +++++|||.||-.|+.+|..+| +.++++++|+.......+.+ ......+..+... .+..+...+...+++.
T Consensus 103 ~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~HkgIrp-~~r~~~i~~l~~~----lp~~~~~~i~~~~y~~ 175 (297)
T PF06342_consen 103 KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHKGIRP-LSRMETINYLYDL----LPRFIINAIMYFYYRM 175 (297)
T ss_pred CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccccCcCH-HHHHHHHHHHHHH----hhHHHHHHHHHHHHHH
Confidence 5 6788999999999999999996 77999999877655333111 1111111111111 1111111111111100
Q ss_pred CCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc-------
Q 042555 195 KPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG------- 267 (322)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~------- 267 (322)
-..+....+.....++.+..-....... ..+.+.+-++|+++++|.+|.++..+...+++..+.
T Consensus 176 iG~KV~~GeeA~na~r~m~~~df~~q~~---------~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~ 246 (297)
T PF06342_consen 176 IGFKVSDGEEAINAMRSMQNCDFEEQKE---------YIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNI 246 (297)
T ss_pred hCeeecChHHHHHHHHHHHhcCHHHHHH---------HHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceee
Confidence 0001111111112222222222222222 222344456899999999999998887777765551
Q ss_pred -------------------CCcEEEEEcCCCccccccChHHHHHHHHHHH
Q 042555 268 -------------------ESARLVIIENTGHAVNLEKPKELLKHLKSFL 298 (322)
Q Consensus 268 -------------------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 298 (322)
.....+.+.+.||+.+-.+++-+++.+...|
T Consensus 247 ~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 247 EKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred ecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 0122344555677766666666666666554
No 68
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.87 E-value=7.3e-21 Score=146.06 Aligned_cols=126 Identities=17% Similarity=0.117 Sum_probs=98.7
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchh---hcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAM---WQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQ 102 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~---~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~ 102 (322)
.+++.+.|....++..+++.+..++||++||+++... ..|..+++.|++. |.|+++|+||||.|.......+...+
T Consensus 3 ~~l~~~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~ 82 (266)
T TIGR03101 3 FFLDAPHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVW 82 (266)
T ss_pred EEecCCCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHH
Confidence 4566667776655554433334678999999986421 2477788899866 99999999999999876555678888
Q ss_pred HHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 103 ARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 103 ~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
++|+..+++.+ +.++++++||||||.+++.+|.++|++++++|+++|...
T Consensus 83 ~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 83 KEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 88877765544 568999999999999999999999999999999998653
No 69
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=3.6e-20 Score=160.59 Aligned_cols=238 Identities=18% Similarity=0.215 Sum_probs=157.2
Q ss_pred ecCCCceEEEEEeCCceEEEEEecCCCCCC----CCeEEEEcCCCCchh-hcHHHHHhhhcCC-ceEEeecCCCCCC---
Q 042555 19 FSNAGLRSTSTDLGDGTVMQCWVPKFPKIL----KPNLLLLHGFGANAM-WQYGEFLRHFTPR-FNVYVPDLVFFGE--- 89 (322)
Q Consensus 19 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~----~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~--- 89 (322)
......+..+++..||.+++.+...|.+.. -|+||++||.+.... +.|....+.|+.. |.|+.+|+||.+.
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 445566788888889999998887654333 389999999975442 2466677778777 9999999997543
Q ss_pred C--CC---CCCCCCHHHHHHHHHHHHHHhc---cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccC
Q 042555 90 S--YT---TRADRTESFQARCVMRLMEVFC---VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEG 161 (322)
Q Consensus 90 s--~~---~~~~~~~~~~~~~~~~~l~~l~---~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~ 161 (322)
. .. .......+++.+.+. ++...+ .+++.|+|||+||++++..+.+.| ++++.+...++.......
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~---- 513 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYF---- 513 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhc----
Confidence 2 11 123345555555555 554443 368999999999999999999988 677777776654322110
Q ss_pred CCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCC
Q 042555 162 LFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQ 241 (322)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 241 (322)
.... ..+......... .+.. ....+..........++++
T Consensus 514 --------------~~~~-~~~~~~~~~~~~-------~~~~-------------------~~~~~~~~sp~~~~~~i~~ 552 (620)
T COG1506 514 --------------GEST-EGLRFDPEENGG-------GPPE-------------------DREKYEDRSPIFYADNIKT 552 (620)
T ss_pred --------------cccc-hhhcCCHHHhCC-------Cccc-------------------ChHHHHhcChhhhhcccCC
Confidence 0000 000000000000 0000 0000111113445678999
Q ss_pred cEEEEEeCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCccccc-cChHHHHHHHHHHHhccCC
Q 042555 242 QTLIIWGEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNL-EKPKELLKHLKSFLIVDSS 303 (322)
Q Consensus 242 Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~~~~ 303 (322)
|+|+|||++|..+|.+++..+.+.+. .+++++++|+.+|.+.. ++...+.+.+.+|++++..
T Consensus 553 P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 553 PLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred CEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988873 56899999999999876 4566788889999987654
No 70
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=1.6e-19 Score=142.41 Aligned_cols=278 Identities=17% Similarity=0.081 Sum_probs=154.4
Q ss_pred eecCCCceEEEEEeCCceEEEEEecCCC-------CCCCCeEEEEcCCCCchhhcH-HHHHhhhcCC-ceEEeecCCCCC
Q 042555 18 SFSNAGLRSTSTDLGDGTVMQCWVPKFP-------KILKPNLLLLHGFGANAMWQY-GEFLRHFTPR-FNVYVPDLVFFG 88 (322)
Q Consensus 18 ~~~~~~~~~~~i~~~~g~~l~~~~~~~~-------~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G 88 (322)
.......+++.++++||..+.+....+. .+..|.||++||+.+++...| +.++..+.++ |+|++++.||+|
T Consensus 87 ~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~ 166 (409)
T KOG1838|consen 87 SKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLG 166 (409)
T ss_pred CCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCC
Confidence 3455567888999999977766544222 246799999999987775334 4455555555 999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhccc--ccceeeeeccCCCCCccccccCC
Q 042555 89 ESYTTRADRTESFQARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK--VLEKVVLCCSGVCLEENDMEEGL 162 (322)
Q Consensus 89 ~s~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~~~~~~~~~~ 162 (322)
.+.-..+..-...+.+|+.++++++ ...++..+|.||||.+...|..+..+ .+.+.+.++.+.+.-.. ...
T Consensus 167 g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~---~~~ 243 (409)
T KOG1838|consen 167 GSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAA---SRS 243 (409)
T ss_pred CCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhh---hhH
Confidence 9975543332333456666666655 45689999999999999999988643 24555555544432100 000
Q ss_pred CCccccchhhh-cccCCChHHHHHHHHhhhcCC-CCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCC
Q 042555 163 FPVTDIDEAAN-ILVPQTPDKLRDLIRFSFVNS-KPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIA 240 (322)
Q Consensus 163 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 240 (322)
........+.. .+.......+.......+.+. +..........+++ +.............-+.+........+.+|+
T Consensus 244 ~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreF-D~~~t~~~~gf~~~deYY~~aSs~~~v~~I~ 322 (409)
T KOG1838|consen 244 IETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREF-DEALTRPMFGFKSVDEYYKKASSSNYVDKIK 322 (409)
T ss_pred HhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHH-HhhhhhhhcCCCcHHHHHhhcchhhhccccc
Confidence 00000000000 000000000000000000000 00000001111111 1111111122222333344444677889999
Q ss_pred CcEEEEEeCCCCCCChHHHH-HHHHHhcCCcEEEEEcCCCccccccC----hHHHHHH-HHHHHhc
Q 042555 241 QQTLIIWGEQDQIFPLELGH-RLKRHIGESARLVIIENTGHAVNLEK----PKELLKH-LKSFLIV 300 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~~ 300 (322)
+|+++|++.+|+++|.+..- ...+.. +++-+++-..+||..++|. +....+. +.+|+..
T Consensus 323 VP~L~ina~DDPv~p~~~ip~~~~~~n-p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 323 VPLLCINAADDPVVPEEAIPIDDIKSN-PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred ccEEEEecCCCCCCCcccCCHHHHhcC-CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 99999999999999985433 333333 7888888888999999876 2333333 6666653
No 71
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=5.4e-19 Score=136.69 Aligned_cols=266 Identities=16% Similarity=0.203 Sum_probs=171.1
Q ss_pred CceEEEEEecCCCCC-CCCeEEEEcCCCCchhh----------cHHHHH---hhhcCC-ceEEeecCCCCC-CCCCC---
Q 042555 33 DGTVMQCWVPKFPKI-LKPNLLLLHGFGANAMW----------QYGEFL---RHFTPR-FNVYVPDLVFFG-ESYTT--- 93 (322)
Q Consensus 33 ~g~~l~~~~~~~~~~-~~~~vv~~hG~~~~~~~----------~~~~~~---~~l~~~-~~v~~~d~~G~G-~s~~~--- 93 (322)
+...+.|..++..+. ....|+++||+.++... .|+.++ +.+... |.||+.|-.|.. .|+.|
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 345778888864333 34589999999885421 266555 234444 999999999865 33332
Q ss_pred --C--------CCCCHHHHHHHHHHHHHHhccccEE-EEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccccc--
Q 042555 94 --R--------ADRTESFQARCVMRLMEVFCVKRMS-LVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEE-- 160 (322)
Q Consensus 94 --~--------~~~~~~~~~~~~~~~l~~l~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~-- 160 (322)
. +..++.++++.-..++++||++++. +||-||||+.+++++..||++|++++.+++..........-
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~ 193 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNE 193 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHH
Confidence 2 3468889998889999999999986 89999999999999999999999999999877665332110
Q ss_pred ----CCCCccc-----------------cchhhhcccCCChHHHHHHHHhhhcCCCCCC-CCCchhHHhhHHHhhhh---
Q 042555 161 ----GLFPVTD-----------------IDEAANILVPQTPDKLRDLIRFSFVNSKPVR-GVPSCFLTDFIDVMCTE--- 215 (322)
Q Consensus 161 ----~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--- 215 (322)
.+..-.. ..+....+.......+.+.+..... ..+.. .......+.+++.....
T Consensus 194 ~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~-~~~~~~~~~~f~vESYL~~qg~kf~~ 272 (368)
T COG2021 194 VQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQ-ADPLRGGGVRFAVESYLDYQGDKFVA 272 (368)
T ss_pred HHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccc-ccccCCCchhHHHHHHHHHHHHHHHh
Confidence 0000000 1111122222222222222221110 00000 01122333333332221
Q ss_pred --hhhhHHHHHHHHhcccccCC-------CCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcE-EEEEc-CCCccccc
Q 042555 216 --YVQEKRELIETILKDRKFCN-------LPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESAR-LVIIE-NTGHAVNL 284 (322)
Q Consensus 216 --~~~~~~~~~~~~~~~~~~~~-------l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~ 284 (322)
.......+.+.+...+.... +.++++|++++.-+.|.+.|++..+++.+.+ +.+. +++++ ..||..++
T Consensus 273 rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L-~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 273 RFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL-PAAGALREIDSPYGHDAFL 351 (368)
T ss_pred ccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc-cccCceEEecCCCCchhhh
Confidence 22234444555555553333 8889999999999999999999999999999 5544 65553 57999999
Q ss_pred cChHHHHHHHHHHHhc
Q 042555 285 EKPKELLKHLKSFLIV 300 (322)
Q Consensus 285 ~~~~~~~~~i~~fl~~ 300 (322)
...+.+...|.+||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 9888899999999974
No 72
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.85 E-value=4.5e-19 Score=133.85 Aligned_cols=267 Identities=16% Similarity=0.139 Sum_probs=157.6
Q ss_pred EEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHH-----hhhcCCceEEeecCCCCCCCCCC--C--CC
Q 042555 26 STSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFL-----RHFTPRFNVYVPDLVFFGESYTT--R--AD 96 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~-----~~l~~~~~v~~~d~~G~G~s~~~--~--~~ 96 (322)
++.|+++-|. +++...+..++++|++|-.|-.|.+....|..+. +.+.+++.++-+|.||+..-... . ..
T Consensus 1 eh~v~t~~G~-v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 1 EHDVETPYGS-VHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp -EEEEETTEE-EEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT---
T ss_pred CceeccCceE-EEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccc
Confidence 3567887775 7777775445569999999999988864466654 56777899999999999775543 2 24
Q ss_pred CCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhccc
Q 042555 97 RTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 97 ~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (322)
.+++++++++..++++++++.++-+|--.||.+..++|.++|++|.|+||+++....... .+..........+.. .
T Consensus 80 Psmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw--~Ew~~~K~~~~~L~~--~ 155 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGW--MEWFYQKLSSWLLYS--Y 155 (283)
T ss_dssp --HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---H--HHHHHHHHH---------
T ss_pred cCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccH--HHHHHHHHhcccccc--c
Confidence 589999999999999999999999999999999999999999999999999987654321 111100000000000 0
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhh-hhhhhHHHHHHHHhcc-cccCCCCCCCCcEEEEEeCCCCCC
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCT-EYVQEKRELIETILKD-RKFCNLPKIAQQTLIIWGEQDQIF 254 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~l~~i~~Pvl~i~g~~D~~~ 254 (322)
.........++...|. ........+..+.+.+.+.. .+......++..+... +.....+...||+|++.|+..+..
T Consensus 156 gmt~~~~d~Ll~h~Fg--~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~ 233 (283)
T PF03096_consen 156 GMTSSVKDYLLWHYFG--KEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV 233 (283)
T ss_dssp CTTS-HHHHHHHHHS---HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH
T ss_pred ccccchHHhhhhcccc--cccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch
Confidence 1111111222222222 00011133344444444433 2334555555555443 345556777899999999998764
Q ss_pred ChHHHHHHHHHhc-CCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 255 PLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 255 ~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+.+.++..++. .+.++..++++|=.+..|+|+.+++.+.=|+...
T Consensus 234 --~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 234 --DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp --HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred --hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 56667777775 5578999999999999999999999999999753
No 73
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=1.7e-19 Score=137.64 Aligned_cols=174 Identities=20% Similarity=0.240 Sum_probs=115.5
Q ss_pred CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC-----------CCCCC---HHHHHHHHHHH
Q 042555 45 PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT-----------RADRT---ESFQARCVMRL 109 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-----------~~~~~---~~~~~~~~~~~ 109 (322)
.....++||++||++++.. .|..+++.|.+. +.+..++.+|...+... ..... .....+.+.++
T Consensus 12 ~~~~~~~vIlLHG~G~~~~-~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 12 DKPAQQLLLLFHGVGDNPV-AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCCcEEEEEeCCCCChH-HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 4556789999999999996 699999999765 44455555554322100 00111 12222333333
Q ss_pred HHH----hc--cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHH
Q 042555 110 MEV----FC--VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKL 183 (322)
Q Consensus 110 l~~----l~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (322)
++. .+ .++++++|||+||.+++.++.++|+.+.+++.+++....
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~------------------------------ 140 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS------------------------------ 140 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc------------------------------
Confidence 333 23 357999999999999999999999877877766542100
Q ss_pred HHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHH
Q 042555 184 RDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLK 263 (322)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~ 263 (322)
.+. ......|++++||++|.++|.+..+++.
T Consensus 141 ----------------~~~---------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~ 171 (232)
T PRK11460 141 ----------------LPE---------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQ 171 (232)
T ss_pred ----------------ccc---------------------------------cccCCCcEEEEecCCCCccCHHHHHHHH
Confidence 000 0113679999999999999999999888
Q ss_pred HHhc---CCcEEEEEcCCCccccccChHHHHHHHHHHH
Q 042555 264 RHIG---ESARLVIIENTGHAVNLEKPKELLKHLKSFL 298 (322)
Q Consensus 264 ~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 298 (322)
+.+. .++++++++++||.+..+.-+.+.+.+.++|
T Consensus 172 ~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 172 EALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 8773 3578899999999986544444444444444
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.85 E-value=2.9e-19 Score=126.47 Aligned_cols=220 Identities=18% Similarity=0.199 Sum_probs=145.1
Q ss_pred CCCCCeEEEEcCCCCchhhcH-HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccc-c--EEE
Q 042555 46 KILKPNLLLLHGFGANAMWQY-GEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVK-R--MSL 120 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~-~--~~l 120 (322)
.++...+|++||+-++....+ ..++..|.+. +.++.+|++|.|+|......-.....++|+..+++++... + -++
T Consensus 30 tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 30 TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEE
Confidence 356679999999998875433 4567778777 9999999999999987744444455569999999998543 3 258
Q ss_pred EEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCC-CC
Q 042555 121 VGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPV-RG 199 (322)
Q Consensus 121 vGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 199 (322)
+|||-||.+++.+|.++++ ++-+|.+++-......- ... ..+..+.+.....+.+..+. ..
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I--------------~eR---lg~~~l~~ike~Gfid~~~rkG~ 171 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGI--------------NER---LGEDYLERIKEQGFIDVGPRKGK 171 (269)
T ss_pred EeecCccHHHHHHHHhhcC-chheEEcccccchhcch--------------hhh---hcccHHHHHHhCCceecCcccCC
Confidence 9999999999999999987 78888777655332110 000 11122233333333311111 11
Q ss_pred CCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCC--CCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcC
Q 042555 200 VPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLP--KIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIEN 277 (322)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (322)
....+..+- .+..+. .+..+... ..+||||-+||..|.++|.+.+.++++.+ ++.++.++||
T Consensus 172 y~~rvt~eS--------------lmdrLn-td~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i-~nH~L~iIEg 235 (269)
T KOG4667|consen 172 YGYRVTEES--------------LMDRLN-TDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKII-PNHKLEIIEG 235 (269)
T ss_pred cCceecHHH--------------HHHHHh-chhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhc-cCCceEEecC
Confidence 111111111 111111 11111122 34799999999999999999999999999 8999999999
Q ss_pred CCccccccChHHHHHHHHHHHhc
Q 042555 278 TGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 278 ~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+.|..... ..+.......|...
T Consensus 236 ADHnyt~~-q~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 236 ADHNYTGH-QSQLVSLGLEFIKT 257 (269)
T ss_pred CCcCccch-hhhHhhhcceeEEe
Confidence 99987554 34556666677653
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.84 E-value=5.8e-18 Score=125.86 Aligned_cols=269 Identities=16% Similarity=0.189 Sum_probs=183.8
Q ss_pred ceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHH-----HhhhcCCceEEeecCCCCCCCCCC--C--
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEF-----LRHFTPRFNVYVPDLVFFGESYTT--R-- 94 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~-----~~~l~~~~~v~~~d~~G~G~s~~~--~-- 94 (322)
..++.|.+..|. +++...+..++++|++|-.|..+.+....|..+ +..+.++|.++-+|.|||-.-.+. .
T Consensus 22 ~~e~~V~T~~G~-v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y 100 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGY 100 (326)
T ss_pred ceeeeecccccc-EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCC
Confidence 577888887776 677777545557889999999999886446654 345666799999999999665433 2
Q ss_pred CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 95 ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
...+.+++++++..++++++.+.++-+|--.||+|..++|..||++|.++||+++....... .++......... +
T Consensus 101 ~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw--iew~~~K~~s~~---l 175 (326)
T KOG2931|consen 101 PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW--IEWAYNKVSSNL---L 175 (326)
T ss_pred CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH--HHHHHHHHHHHH---H
Confidence 35589999999999999999999999999999999999999999999999999986644321 111100000000 0
Q ss_pred ccCCChHHH-HHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhh-hhhHHHHHHHHhccc-ccCCCC----CCCCcEEEEE
Q 042555 175 LVPQTPDKL-RDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEY-VQEKRELIETILKDR-KFCNLP----KIAQQTLIIW 247 (322)
Q Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~----~i~~Pvl~i~ 247 (322)
......... ..++...|. +..........+++.+.+.... ......++..+.... ...... .++||+|++.
T Consensus 176 ~~~Gmt~~~~d~ll~H~Fg--~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvv 253 (326)
T KOG2931|consen 176 YYYGMTQGVKDYLLAHHFG--KEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVV 253 (326)
T ss_pred HhhchhhhHHHHHHHHHhc--cccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEe
Confidence 000111122 222333333 2223335555666655554443 345555666655543 222222 5569999999
Q ss_pred eCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccccChHHHHHHHHHHHhccC
Q 042555 248 GEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 248 g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~~ 302 (322)
|+..+.+ +.+-++..++. .+..+..+.++|-.+..++|..+++.+.=|+....
T Consensus 254 Gd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 254 GDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred cCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 9998775 45555666663 56788899999999999999999999999998654
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.82 E-value=3.3e-18 Score=136.13 Aligned_cols=240 Identities=18% Similarity=0.148 Sum_probs=135.9
Q ss_pred ecCCCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCC
Q 042555 19 FSNAGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADR 97 (322)
Q Consensus 19 ~~~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~ 97 (322)
.....+++..|+..++....|...+++++..|+||++.|+.+..+..|..+.+.|.+. +.++++|.||.|.|.......
T Consensus 160 l~~~~i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~ 239 (411)
T PF06500_consen 160 LSDYPIEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQ 239 (411)
T ss_dssp HSSSEEEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S
T ss_pred hCCCCcEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCc
Confidence 3455678888888664433444455455556778888888877764455566777655 999999999999986432222
Q ss_pred CHHHHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhc
Q 042555 98 TESFQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANI 174 (322)
Q Consensus 98 ~~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (322)
+.+.+...+.+.+... +..+|.++|.|+||++|.++|..++.|++++|..+++...--.. ..
T Consensus 240 D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~---------------~~ 304 (411)
T PF06500_consen 240 DSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTD---------------PE 304 (411)
T ss_dssp -CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH----------------HH
T ss_pred CHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhcc---------------HH
Confidence 2334455555555544 45789999999999999999999889999999999876432110 00
Q ss_pred ccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccc--cCCC--CCCCCcEEEEEeCC
Q 042555 175 LVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRK--FCNL--PKIAQQTLIIWGEQ 250 (322)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l--~~i~~Pvl~i~g~~ 250 (322)
.....+..+...+...+. .. ......+...+..... ...+ .+..+|+|.+.|++
T Consensus 305 ~~~~~P~my~d~LA~rlG---------------------~~-~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~ 362 (411)
T PF06500_consen 305 WQQRVPDMYLDVLASRLG---------------------MA-AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGED 362 (411)
T ss_dssp HHTTS-HHHHHHHHHHCT----------------------S-CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT
T ss_pred HHhcCCHHHHHHHHHHhC---------------------Cc-cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCC
Confidence 001112222222222211 00 0011111122222221 2234 67788999999999
Q ss_pred CCCCChHHHHHHHHHhcCCcEEEEEcCCC-ccccccChHHHHHHHHHHHhc
Q 042555 251 DQIFPLELGHRLKRHIGESARLVIIENTG-HAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 251 D~~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~~~~~~~~~~i~~fl~~ 300 (322)
|+++|.+..+-++..- .+.+...++... |..+ +.-...+.+||++
T Consensus 363 D~v~P~eD~~lia~~s-~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 363 DPVSPIEDSRLIAESS-TDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp -SSS-HHHHHHHHHTB-TT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhcC-CCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 9999999999888877 677788887644 4332 3455677788765
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.81 E-value=1.4e-17 Score=130.97 Aligned_cols=119 Identities=18% Similarity=0.128 Sum_probs=82.5
Q ss_pred CceEEEEEecCCC---CCCCCeEEEEcCCCCchhhcHHH--HHhhhcC-C-ceEEeecC--CCCCCCCCC----------
Q 042555 33 DGTVMQCWVPKFP---KILKPNLLLLHGFGANAMWQYGE--FLRHFTP-R-FNVYVPDL--VFFGESYTT---------- 93 (322)
Q Consensus 33 ~g~~l~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~-~-~~v~~~d~--~G~G~s~~~---------- 93 (322)
.+..+.|..+.|. ..+.|+|+++||++++.. .|.. .+..++. . +.|+++|. +|+|.+...
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~ 101 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAG 101 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcc
Confidence 4455555554332 345789999999998885 4643 2334443 3 99999998 555533210
Q ss_pred ----------CCCCCHHH-HHHHHHHHHHH---hccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 94 ----------RADRTESF-QARCVMRLMEV---FCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 94 ----------~~~~~~~~-~~~~~~~~l~~---l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
...+.... .++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++...
T Consensus 102 ~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 102 FYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred ccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 00123333 46778777776 3557899999999999999999999999999999988754
No 78
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.81 E-value=1e-18 Score=132.58 Aligned_cols=192 Identities=18% Similarity=0.218 Sum_probs=119.8
Q ss_pred HHHHHhhhcCC-ceEEeecCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHh------ccccEEEEEEchhHHHHHHHH
Q 042555 66 YGEFLRHFTPR-FNVYVPDLVFFGESYTT----RADRTESFQARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 66 ~~~~~~~l~~~-~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a 134 (322)
|......|++. |.|+.+|+||.+..... .....-...++|+.++++.+ +.+++.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44566778666 99999999998753211 11112223466666666655 457899999999999999999
Q ss_pred HhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhh
Q 042555 135 AQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCT 214 (322)
Q Consensus 135 ~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (322)
.++|+++++++..++........... .. +......... .+ ......
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~-----------------~~---~~~~~~~~~~--~~--~~~~~~---------- 128 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTT-----------------DI---YTKAEYLEYG--DP--WDNPEF---------- 128 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHT-----------------CC---HHHGHHHHHS--ST--TTSHHH----------
T ss_pred cccceeeeeeeccceecchhcccccc-----------------cc---cccccccccC--cc--chhhhh----------
Confidence 99999999999999876544221000 00 0000000000 00 000000
Q ss_pred hhhhhHHHHHHHHhcccccCCCCC--CCCcEEEEEeCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCcccc-ccChH
Q 042555 215 EYVQEKRELIETILKDRKFCNLPK--IAQQTLIIWGEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVN-LEKPK 288 (322)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~-~~~~~ 288 (322)
..... ....+.+ +++|+|+++|++|..+|++.+.++.+.+. .+++++++|++||.+. .+...
T Consensus 129 ------~~~~s------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 129 ------YRELS------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp ------HHHHH------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred ------hhhhc------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 00011 1112223 78999999999999999999999888773 4589999999999654 34455
Q ss_pred HHHHHHHHHHhccCC
Q 042555 289 ELLKHLKSFLIVDSS 303 (322)
Q Consensus 289 ~~~~~i~~fl~~~~~ 303 (322)
...+.+.+|+++...
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 778889999987653
No 79
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=8.6e-18 Score=132.31 Aligned_cols=199 Identities=16% Similarity=0.126 Sum_probs=117.6
Q ss_pred ceEEEEEecCCC---CCCCCeEEEEcCCCCchhhcHHH---HHhhhcCC-ceEEeecCCCCCC-----CCC---------
Q 042555 34 GTVMQCWVPKFP---KILKPNLLLLHGFGANAMWQYGE---FLRHFTPR-FNVYVPDLVFFGE-----SYT--------- 92 (322)
Q Consensus 34 g~~l~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~---~~~~l~~~-~~v~~~d~~G~G~-----s~~--------- 92 (322)
|..+.|..+-|. +.+.|+|+++||++++.. .|.. +...+... +.|+.+|..++|. +..
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~-~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDE-NFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChH-HHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 444555443222 345789999999998875 3543 33455554 9999999887662 110
Q ss_pred ----CCC--------CCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCcccccc
Q 042555 93 ----TRA--------DRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEE 160 (322)
Q Consensus 93 ----~~~--------~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~ 160 (322)
... .+-.++..+.+....+.++.++++++||||||..++.++.++|+++++++.+++........
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~--- 184 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP--- 184 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc---
Confidence 000 01122333334444444577889999999999999999999999999999998865422100
Q ss_pred CCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCC
Q 042555 161 GLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIA 240 (322)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 240 (322)
.. ...+...+. . +...... .........+...+
T Consensus 185 ------------------~~---~~~~~~~~g--~-----~~~~~~~-------------------~d~~~~~~~~~~~~ 217 (283)
T PLN02442 185 ------------------WG---QKAFTNYLG--S-----DKADWEE-------------------YDATELVSKFNDVS 217 (283)
T ss_pred ------------------hh---hHHHHHHcC--C-----ChhhHHH-------------------cChhhhhhhccccC
Confidence 00 000111111 0 0000000 00000122334568
Q ss_pred CcEEEEEeCCCCCCChH-HHHHHHHH---hcCCcEEEEEcCCCcccc
Q 042555 241 QQTLIIWGEQDQIFPLE-LGHRLKRH---IGESARLVIIENTGHAVN 283 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~-~~~~~~~~---~~~~~~~~~~~~~gH~~~ 283 (322)
+|+++++|++|.+++.. ..+.+.+. .+.+++++++++.+|...
T Consensus 218 ~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 218 ATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 89999999999998853 23334333 335689999999999865
No 80
>PLN00021 chlorophyllase
Probab=99.80 E-value=5.7e-18 Score=133.82 Aligned_cols=182 Identities=18% Similarity=0.171 Sum_probs=118.7
Q ss_pred ceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHH-
Q 042555 34 GTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLME- 111 (322)
Q Consensus 34 g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~- 111 (322)
+..+..+... ..+..|+|||+||++.+.. .|..+++.|++. |.|+++|++|++.+.. ....++ +.++..++.
T Consensus 38 ~~p~~v~~P~-~~g~~PvVv~lHG~~~~~~-~y~~l~~~Las~G~~VvapD~~g~~~~~~---~~~i~d-~~~~~~~l~~ 111 (313)
T PLN00021 38 PKPLLVATPS-EAGTYPVLLFLHGYLLYNS-FYSQLLQHIASHGFIVVAPQLYTLAGPDG---TDEIKD-AAAVINWLSS 111 (313)
T ss_pred CceEEEEeCC-CCCCCCEEEEECCCCCCcc-cHHHHHHHHHhCCCEEEEecCCCcCCCCc---hhhHHH-HHHHHHHHHh
Confidence 3444443332 3566799999999999886 599999999987 9999999998653321 112222 222222222
Q ss_pred ---H-------hccccEEEEEEchhHHHHHHHHHhccc-----ccceeeeeccCCCCCccccccCCCCccccchhhhccc
Q 042555 112 ---V-------FCVKRMSLVGISYGGFVGYSLAAQFPK-----VLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 112 ---~-------l~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (322)
. .+.++++++|||+||.+++.+|..+++ +++++|+++|........
T Consensus 112 ~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~------------------- 172 (313)
T PLN00021 112 GLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGK------------------- 172 (313)
T ss_pred hhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccccccc-------------------
Confidence 2 234689999999999999999998874 578999888754321100
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCC----
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQ---- 252 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~---- 252 (322)
...+ .... ......++.+|++++.+..|.
T Consensus 173 ---------------------~~~p-~il~-------------------------~~~~s~~~~~P~liig~g~~~~~~~ 205 (313)
T PLN00021 173 ---------------------QTPP-PVLT-------------------------YAPHSFNLDIPVLVIGTGLGGEPRN 205 (313)
T ss_pred ---------------------CCCC-cccc-------------------------cCcccccCCCCeEEEecCCCccccc
Confidence 0000 0000 111122478999999999763
Q ss_pred -C----CChH-HHHHHHHHhcCCcEEEEEcCCCccccccCh
Q 042555 253 -I----FPLE-LGHRLKRHIGESARLVIIENTGHAVNLEKP 287 (322)
Q Consensus 253 -~----~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 287 (322)
. .|.. ...++++.+.+.+...+++++||+-++++.
T Consensus 206 ~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 206 PLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred ccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 2 2233 447777777678889999999999886543
No 81
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.79 E-value=6.2e-17 Score=130.23 Aligned_cols=248 Identities=12% Similarity=0.085 Sum_probs=154.9
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGF 128 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ 128 (322)
.|+||++..+.+.....-+.+.+.|-+.+.|+..||..-+..+......+++++++.+.++++++|.+ ++++|+|+||.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~ 180 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAV 180 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhH
Confidence 37999999988766333456777777799999999987665544467789999999999999999877 99999999999
Q ss_pred HHHHHHHhc-----ccccceeeeeccCCCCCcc-ccccCCCCccccchhhhcc---------------------------
Q 042555 129 VGYSLAAQF-----PKVLEKVVLCCSGVCLEEN-DMEEGLFPVTDIDEAANIL--------------------------- 175 (322)
Q Consensus 129 ~a~~~a~~~-----p~~v~~lil~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------------------- 175 (322)
.++.+++.. |.+++++++++++.+.... .....+.....+..+....
T Consensus 181 ~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~ 260 (406)
T TIGR01849 181 PVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFIS 260 (406)
T ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHH
Confidence 977666654 6679999999999987653 2122221111111111110
Q ss_pred -cCCC-hHHHHHHHHhhhcCCCCCCCCCchhHHhhH---HHhhhhhhhhHHHHHHHHhccc-----------ccCCCCCC
Q 042555 176 -VPQT-PDKLRDLIRFSFVNSKPVRGVPSCFLTDFI---DVMCTEYVQEKRELIETILKDR-----------KFCNLPKI 239 (322)
Q Consensus 176 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~i 239 (322)
.+.. ......++..... . ..........+. .....-......+.++.+...+ ..-++.+|
T Consensus 261 mnp~r~~~~~~~~~~~l~~---g-d~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 261 MNLDRHTKAHSDFFLHLVK---G-DGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred cCcchHHHHHHHHHHHHhc---C-CcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 0000 0001111111100 0 000000001011 1111111122222332222221 44567789
Q ss_pred C-CcEEEEEeCCCCCCChHHHHHHHHHh---c-CCcEEEEEcCCCcccccc---ChHHHHHHHHHHHhcc
Q 042555 240 A-QQTLIIWGEQDQIFPLELGHRLKRHI---G-ESARLVIIENTGHAVNLE---KPKELLKHLKSFLIVD 301 (322)
Q Consensus 240 ~-~Pvl~i~g~~D~~~~~~~~~~~~~~~---~-~~~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~ 301 (322)
+ +|++.+.|++|.++|+.+...+.+.+ + .+.+.++.+++||+.... ..+++...|.+||.++
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 9 99999999999999999999998874 2 345677787899998764 3577899999999753
No 82
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.78 E-value=1.9e-16 Score=125.35 Aligned_cols=234 Identities=19% Similarity=0.155 Sum_probs=133.3
Q ss_pred EEEEEeCCceEEEEEecCCC--CCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCC-CCCC---------
Q 042555 26 STSTDLGDGTVMQCWVPKFP--KILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGE-SYTT--------- 93 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~-s~~~--------- 93 (322)
..+++..+|..++-+...|. .++-|.||.+||.++... .|......-...+.|+.+|.||+|. +...
T Consensus 58 ~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~-~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~ 136 (320)
T PF05448_consen 58 DVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG-DPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLK 136 (320)
T ss_dssp EEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG-GHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SS
T ss_pred EEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC-CcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCc
Confidence 44555568888886665443 456689999999999875 4766665555569999999999993 2110
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccc
Q 042555 94 ----------RADRTESFQARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEEND 157 (322)
Q Consensus 94 ----------~~~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~ 157 (322)
...+-+..+..|....++.+ +.++|.+.|.|+||.+++.+|+..+ +|++++...|.......
T Consensus 137 g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~- 214 (320)
T PF05448_consen 137 GHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRR- 214 (320)
T ss_dssp SSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHH-
T ss_pred cHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhh-
Confidence 00111223445666656554 3478999999999999999999886 69999998876543211
Q ss_pred cccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCC
Q 042555 158 MEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLP 237 (322)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (322)
.+.... ...+-.....+.+.. ..........+..+...+......
T Consensus 215 ----------------------------~~~~~~------~~~~y~~~~~~~~~~-d~~~~~~~~v~~~L~Y~D~~nfA~ 259 (320)
T PF05448_consen 215 ----------------------------ALELRA------DEGPYPEIRRYFRWR-DPHHEREPEVFETLSYFDAVNFAR 259 (320)
T ss_dssp ----------------------------HHHHT--------STTTHHHHHHHHHH-SCTHCHHHHHHHHHHTT-HHHHGG
T ss_pred ----------------------------hhhcCC------ccccHHHHHHHHhcc-CCCcccHHHHHHHHhhhhHHHHHH
Confidence 000000 000111111111100 011112222233333333344456
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHH-HHHHHHHHhcc
Q 042555 238 KIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKEL-LKHLKSFLIVD 301 (322)
Q Consensus 238 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 301 (322)
.|+||+++-.|-.|.++|+...-..++.++..+++.+++..||.. ...+ .+...+||.++
T Consensus 260 ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~----~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 260 RIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEY----GPEFQEDKQLNFLKEH 320 (320)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SST----THHHHHHHHHHHHHH-
T ss_pred HcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCc----hhhHHHHHHHHHHhcC
Confidence 889999999999999999999999999997678999999999964 3334 66677787653
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.77 E-value=2e-16 Score=131.02 Aligned_cols=225 Identities=12% Similarity=0.106 Sum_probs=138.6
Q ss_pred CCCCeEEEEcCCCCchhhcH-----HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----ccc
Q 042555 47 ILKPNLLLLHGFGANAMWQY-----GEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF----CVK 116 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l----~~~ 116 (322)
..++|||+++.+-... +.+ ..+++.|.++ +.|+.+|+++-+... ...+++++++.+.+.++.. |.+
T Consensus 213 v~~~PLLIVPp~INK~-YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 213 QHARPLLVVPPQINKF-YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred cCCCcEEEechhhhhh-heeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 4567999999988544 334 4678888777 999999999866553 5578888888777777765 678
Q ss_pred cEEEEEEchhHHHHHH----HHHhccc-ccceeeeeccCCCCCccccccCCCCcccc------------------chhhh
Q 042555 117 RMSLVGISYGGFVGYS----LAAQFPK-VLEKVVLCCSGVCLEENDMEEGLFPVTDI------------------DEAAN 173 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lil~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~ 173 (322)
++.++|+|+||.++.. +++++++ +|++++++.++.++........+.....+ .....
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~ 368 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFA 368 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHH
Confidence 9999999999999987 7888885 89999999998887643211111110011 00111
Q ss_pred cccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhccc-----------ccCCCCCCCCc
Q 042555 174 ILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDR-----------KFCNLPKIAQQ 242 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~i~~P 242 (322)
.+.+... .+.......... +...... ...+.....+-.......++..+.... ..-.+.+|+||
T Consensus 369 ~LrP~dl-iw~y~v~~yllg-~~p~~fd---ll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l~v~G~~idL~~I~~P 443 (560)
T TIGR01839 369 WMRPNDL-IWNYWVNNYLLG-NEPPAFD---ILYWNNDTTRLPAAFHGDLLDMFKSNPLTRPDALEVCGTPIDLKKVKCD 443 (560)
T ss_pred hcCchhh-hHHHHHHHhhcC-CCcchhh---HHHHhCcCccchHHHHHHHHHHHhcCCCCCCCCEEECCEEechhcCCCC
Confidence 1111111 111111111110 0000000 222222222222222223332222211 34467899999
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcc
Q 042555 243 TLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHA 281 (322)
Q Consensus 243 vl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 281 (322)
++++.|++|.++|++.+..+.+.++.+.+++..+ +||.
T Consensus 444 vl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHI 481 (560)
T TIGR01839 444 SFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHI 481 (560)
T ss_pred eEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCcc
Confidence 9999999999999999999999996567777775 5885
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=4.8e-17 Score=123.34 Aligned_cols=178 Identities=22% Similarity=0.305 Sum_probs=108.5
Q ss_pred CCCCCCeEEEEcCCCCchhhcHHHHHh-hhc-CCceEEeecCCC------CCC---CCCC------CC---CCCHHHHHH
Q 042555 45 PKILKPNLLLLHGFGANAMWQYGEFLR-HFT-PRFNVYVPDLVF------FGE---SYTT------RA---DRTESFQAR 104 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~~~~~~~~-~l~-~~~~v~~~d~~G------~G~---s~~~------~~---~~~~~~~~~ 104 (322)
.++..++||++||+|.+.. .+..+.. .+. .+..++.++-|- .|. +..+ .. ...+...++
T Consensus 10 ~~~~~~lvi~LHG~G~~~~-~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSED-LFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp SST-SEEEEEE--TTS-HH-HHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcc-hhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 4667889999999999995 4666655 222 236677665442 233 2111 01 112233344
Q ss_pred HHHHHHHHh-----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCC
Q 042555 105 CVMRLMEVF-----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQT 179 (322)
Q Consensus 105 ~~~~~l~~l-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (322)
.+.++++.. ..+++++.|+|.||.+++.++.++|+.+.++|.+++........
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~---------------------- 146 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL---------------------- 146 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC----------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc----------------------
Confidence 555555543 45789999999999999999999999999999999865332110
Q ss_pred hHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHH
Q 042555 180 PDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELG 259 (322)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~ 259 (322)
.. ...... ++|++++||++|+++|.+..
T Consensus 147 ---------------------~~-----------------------------~~~~~~--~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 147 ---------------------ED-----------------------------RPEALA--KTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp ---------------------HC-----------------------------CHCCCC--TS-EEEEEETT-SSSTHHHH
T ss_pred ---------------------cc-----------------------------cccccC--CCcEEEEecCCCCcccHHHH
Confidence 00 000111 67999999999999999988
Q ss_pred HHHHHHhc---CCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 260 HRLKRHIG---ESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 260 ~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+...+.+. .+++++.+++.||.+. .+..+.+.+||+++
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 88877773 4689999999999874 34556788888753
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=5.7e-17 Score=122.64 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCCCCchhhcHH---HHHhhhcCC-ceEEeecCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHh--
Q 042555 46 KILKPNLLLLHGFGANAMWQYG---EFLRHFTPR-FNVYVPDLVFFGESYTTRADR------TESFQARCVMRLMEVF-- 113 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~------~~~~~~~~~~~~l~~l-- 113 (322)
+++.|+||++||.+++.. .+. .+...+.+. |.|+++|++|++.+......+ .......++..+++.+
T Consensus 10 ~~~~P~vv~lHG~~~~~~-~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (212)
T TIGR01840 10 TGPRALVLALHGCGQTAS-AYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKA 88 (212)
T ss_pred CCCCCEEEEeCCCCCCHH-HHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHH
Confidence 356789999999998775 354 233444344 999999999987543211000 0011233333333332
Q ss_pred ----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 114 ----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 114 ----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
+.++++|+|||+||.+++.++.++|+++.+++.+++...
T Consensus 89 ~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 89 NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred hcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 336899999999999999999999999999988887653
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.75 E-value=6.5e-17 Score=123.09 Aligned_cols=177 Identities=19% Similarity=0.263 Sum_probs=116.7
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCC-CCCC--CCCC--------CHHHHHHHHHHHHHHh-
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGE-SYTT--RADR--------TESFQARCVMRLMEVF- 113 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~-s~~~--~~~~--------~~~~~~~~~~~~l~~l- 113 (322)
++.|.||++|++.|-.. ..+.+++.|++. |.|+++|+-+-.. .... .... ..+...+++.+.++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 46789999999888765 478899999988 9999999864333 1111 0000 1334556776666665
Q ss_pred -----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHH
Q 042555 114 -----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIR 188 (322)
Q Consensus 114 -----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (322)
+.+++.++|+|+||.+++.+|.+. ..+++++...|......
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--------------------------------- 136 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--------------------------------- 136 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG---------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc---------------------------------
Confidence 246899999999999999999887 57898888766110000
Q ss_pred hhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHh--
Q 042555 189 FSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHI-- 266 (322)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~-- 266 (322)
......++++|+++++|++|+.++.+..+.+.+.+
T Consensus 137 -------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 137 -------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp -------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred -------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 00112367899999999999999999888777776
Q ss_pred -cCCcEEEEEcCCCccccccC--------hHHHHHHHHHHHhcc
Q 042555 267 -GESARLVIIENTGHAVNLEK--------PKELLKHLKSFLIVD 301 (322)
Q Consensus 267 -~~~~~~~~~~~~gH~~~~~~--------~~~~~~~i~~fl~~~ 301 (322)
+...++++++|++|.+.... .++..+.+.+||+++
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 36789999999999887643 245667788888765
No 87
>PRK10162 acetyl esterase; Provisional
Probab=99.75 E-value=7e-16 Score=123.63 Aligned_cols=235 Identities=14% Similarity=0.076 Sum_probs=131.1
Q ss_pred ceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCC---CchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCC
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFG---ANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRT 98 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~ 98 (322)
.+...|...+|. +..+.+.|.....|+||++||.+ ++.+ .|..+...|++. +.|+++|+|.......+ ..
T Consensus 57 ~~~~~i~~~~g~-i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p---~~ 131 (318)
T PRK10162 57 TRAYMVPTPYGQ-VETRLYYPQPDSQATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFP---QA 131 (318)
T ss_pred EEEEEEecCCCc-eEEEEECCCCCCCCEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCC---Cc
Confidence 445566666662 44444433444568999999976 4443 477888888763 99999999965443222 23
Q ss_pred HHHHH---HHHHHHHHHhc--cccEEEEEEchhHHHHHHHHHhc------ccccceeeeeccCCCCCccccccCCCCccc
Q 042555 99 ESFQA---RCVMRLMEVFC--VKRMSLVGISYGGFVGYSLAAQF------PKVLEKVVLCCSGVCLEENDMEEGLFPVTD 167 (322)
Q Consensus 99 ~~~~~---~~~~~~l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~ 167 (322)
.++.. +.+.+..+.++ .++++|+|+|+||.+++.++... +.++.+++++.|........ .
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~---------s 202 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSV---------S 202 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCCh---------h
Confidence 33322 23333333454 36899999999999999998753 35789999998866432110 0
Q ss_pred cchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEE
Q 042555 168 IDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIW 247 (322)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~ 247 (322)
...............+..+...... ....... . + ... ....+..--.|+++++
T Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~y~~--~~~~~~~-p----~---------------~~p-----~~~~l~~~lPp~~i~~ 255 (318)
T PRK10162 203 RRLLGGVWDGLTQQDLQMYEEAYLS--NDADRES-P----Y---------------YCL-----FNNDLTRDVPPCFIAG 255 (318)
T ss_pred HHHhCCCccccCHHHHHHHHHHhCC--CccccCC-c----c---------------cCc-----chhhhhcCCCCeEEEe
Confidence 0000000000011111111111111 0000000 0 0 000 0011211235999999
Q ss_pred eCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCcccccc-----ChHHHHHHHHHHHhcc
Q 042555 248 GEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNLE-----KPKELLKHLKSFLIVD 301 (322)
Q Consensus 248 g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~-----~~~~~~~~i~~fl~~~ 301 (322)
|+.|.+.+ ....+++.+. ..+++++++|..|.+..- ..++..+.+.+||++.
T Consensus 256 g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 256 AEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred cCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 99999875 4555555552 568999999999976532 2356677788888764
No 88
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.74 E-value=1.3e-15 Score=117.23 Aligned_cols=220 Identities=14% Similarity=0.177 Sum_probs=136.3
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccc-cEEEEEEchhH
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVK-RMSLVGISYGG 127 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~lvGhS~Gg 127 (322)
++|+++|+.+|+.. .|..+++.|... +.|+.++.+|.+.. .....+++++++...+.|.....+ ++.|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~-~y~~la~~l~~~~~~v~~i~~~~~~~~--~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS-SYRPLARALPDDVIGVYGIEYPGRGDD--EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGG-GGHHHHHHHTTTEEEEEEECSTTSCTT--SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHH-HHHHHHHhCCCCeEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999985 699999999998 99999999999832 234679999999999888887665 99999999999
Q ss_pred HHHHHHHHhc---ccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchh
Q 042555 128 FVGYSLAAQF---PKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCF 204 (322)
Q Consensus 128 ~~a~~~a~~~---p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (322)
.+|.++|.+- ...+..++++++..+....... ... .........+..... .+...
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~-----------~~~----~~~~~~~~~~~~~~~-------~~~~~ 135 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPR-----------SRE----PSDEQFIEELRRIGG-------TPDAS 135 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHH-----------HHH----CHHHHHHHHHHHHCH-------HHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchh-----------hhh----hhHHHHHHHHHHhcC-------Cchhh
Confidence 9999999875 3458999999976543211000 000 000001111111110 00000
Q ss_pred HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChH---HHHHHHHHhcCCcEEEEEcCCCcc
Q 042555 205 LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLE---LGHRLKRHIGESARLVIIENTGHA 281 (322)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~~~~~~~~~~~~gH~ 281 (322)
... ...................... ......-.+|.++.....|+..... ....+.+......+++.++| +|+
T Consensus 136 ~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~ 211 (229)
T PF00975_consen 136 LED--EELLARLLRALRDDFQALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHF 211 (229)
T ss_dssp CHH--HHHHHHHHHHHHHHHHHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETT
T ss_pred hcC--HHHHHHHHHHHHHHHHHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCc
Confidence 000 0000111111111111111110 1111111467889999999888766 34446776645678889975 999
Q ss_pred cccc-ChHHHHHHHHHHH
Q 042555 282 VNLE-KPKELLKHLKSFL 298 (322)
Q Consensus 282 ~~~~-~~~~~~~~i~~fl 298 (322)
.++. +..++++.|.++|
T Consensus 212 ~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 212 SMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp GHHSTTHHHHHHHHHHHH
T ss_pred EecchHHHHHHHHHhccC
Confidence 9987 6778888888875
No 89
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.73 E-value=1.4e-16 Score=137.16 Aligned_cols=125 Identities=19% Similarity=0.112 Sum_probs=94.3
Q ss_pred EEeCCceEEEEEecCCC-CCCCCeEEEEcCCCCchh--hcH-HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH
Q 042555 29 TDLGDGTVMQCWVPKFP-KILKPNLLLLHGFGANAM--WQY-GEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQA 103 (322)
Q Consensus 29 i~~~~g~~l~~~~~~~~-~~~~~~vv~~hG~~~~~~--~~~-~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 103 (322)
|+..||.+|++..+.|. .++.|+||++||++.+.. ..+ ......|.++ |.|+++|+||+|.|.......+ ...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccc
Confidence 34568999987666443 346789999999987652 011 2234455555 9999999999999987643333 4567
Q ss_pred HHHHHHHHHhc-----cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 104 RCVMRLMEVFC-----VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 104 ~~~~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
+|+.++++.+. ..++.++|||+||.+++.+|..+|+++++++..++.....
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 78888887763 2589999999999999999999999999999988766543
No 90
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=4.1e-15 Score=113.02 Aligned_cols=197 Identities=16% Similarity=0.225 Sum_probs=142.7
Q ss_pred EEEEEeCCceEEEEEe-cCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCC-CCCCCCC-------C
Q 042555 26 STSTDLGDGTVMQCWV-PKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFF-GESYTTR-------A 95 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~-~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~-------~ 95 (322)
...+..++ ..+.-+. .+.+.+..|.||++|++.+-.. ..+.+++.|++. |.|+++|+-+. |.+.... .
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~-~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~ 81 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNP-HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELET 81 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCch-HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhh
Confidence 45566666 4455444 4333344489999999888876 499999999998 99999998763 3332111 0
Q ss_pred ----CCCHHHHHHHHHHHHHHhc------cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCc
Q 042555 96 ----DRTESFQARCVMRLMEVFC------VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPV 165 (322)
Q Consensus 96 ----~~~~~~~~~~~~~~l~~l~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~ 165 (322)
..+......|+.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 82 ~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~---------- 150 (236)
T COG0412 82 GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD---------- 150 (236)
T ss_pred hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc----------
Confidence 1233566778888887773 467999999999999999999988 6888887766442111
Q ss_pred cccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEE
Q 042555 166 TDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLI 245 (322)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~ 245 (322)
.....++++|+++
T Consensus 151 -------------------------------------------------------------------~~~~~~~~~pvl~ 163 (236)
T COG0412 151 -------------------------------------------------------------------TADAPKIKVPVLL 163 (236)
T ss_pred -------------------------------------------------------------------ccccccccCcEEE
Confidence 0113478999999
Q ss_pred EEeCCCCCCChHHHHHHHHHhcC---CcEEEEEcCCCccccccC-----------hHHHHHHHHHHHhccC
Q 042555 246 IWGEQDQIFPLELGHRLKRHIGE---SARLVIIENTGHAVNLEK-----------PKELLKHLKSFLIVDS 302 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~-----------~~~~~~~i~~fl~~~~ 302 (322)
++|+.|..+|......+.+.+.. ..++.+++++.|.++.+. .+.-.+.+.+|+++..
T Consensus 164 ~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 164 HLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred EecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999988888877742 578899999989887442 2456677888887654
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.73 E-value=9.1e-17 Score=115.39 Aligned_cols=156 Identities=18% Similarity=0.255 Sum_probs=104.1
Q ss_pred EEEEcCCCCchhhcHHHH-HhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHH
Q 042555 52 LLLLHGFGANAMWQYGEF-LRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVG 130 (322)
Q Consensus 52 vv~~hG~~~~~~~~~~~~-~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a 130 (322)
|+++||++++....|... .+.|...++|-.+|+ ...+.+++.+.+.+.+.... +++++||||+||..+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----------~~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~ 69 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----------DNPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTA 69 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------------TS--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----------CCCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHH
Confidence 689999998876556654 455655577777776 23367778888887777664 679999999999999
Q ss_pred HHHH-HhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhH
Q 042555 131 YSLA-AQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFI 209 (322)
Q Consensus 131 ~~~a-~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
++++ .....+|.+++|++|+....... .. .... .+
T Consensus 70 l~~l~~~~~~~v~g~lLVAp~~~~~~~~-------------------------------------~~-~~~~-----~f- 105 (171)
T PF06821_consen 70 LRWLAEQSQKKVAGALLVAPFDPDDPEP-------------------------------------FP-PELD-----GF- 105 (171)
T ss_dssp HHHHHHTCCSSEEEEEEES--SCGCHHC-------------------------------------CT-CGGC-----CC-
T ss_pred HHHHhhcccccccEEEEEcCCCcccccc-------------------------------------hh-hhcc-----cc-
Confidence 9999 77788999999999875320000 00 0000 00
Q ss_pred HHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccC
Q 042555 210 DVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEK 286 (322)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 286 (322)
.......+.+|.++|.+++|+++|.+.++++++.+ +++++.++++||+.-.+.
T Consensus 106 ----------------------~~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 106 ----------------------TPLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp ----------------------TTSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred ----------------------ccCcccccCCCeEEEEcCCCCccCHHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 00011234567799999999999999999999999 789999999999976543
No 92
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.73 E-value=1.1e-16 Score=130.27 Aligned_cols=108 Identities=12% Similarity=0.120 Sum_probs=84.5
Q ss_pred CCCCCeEEEEcCCCCchh-hcHHH-HHhhhc--C-CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------c
Q 042555 46 KILKPNLLLLHGFGANAM-WQYGE-FLRHFT--P-RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF------C 114 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~-~~~~~-~~~~l~--~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l------~ 114 (322)
+..+|++|++||++++.. ..|.. +.+.|. . +++|+++|++|+|.+..+.........++++.++++.+ +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 456789999999987541 13554 555553 2 49999999999998876543344566677777777765 3
Q ss_pred cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
.++++|+||||||.+|..++...|++|.++++++|+.+.
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 689999999999999999999999999999999997543
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.72 E-value=1.6e-15 Score=106.04 Aligned_cols=174 Identities=18% Similarity=0.217 Sum_probs=121.6
Q ss_pred CCCCCCeEEEEcCC---CCchhh-cHHHHHhhhcCC-ceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhccc--
Q 042555 45 PKILKPNLLLLHGF---GANAMW-QYGEFLRHFTPR-FNVYVPDLVFFGESYTT-RADRTESFQARCVMRLMEVFCVK-- 116 (322)
Q Consensus 45 ~~~~~~~vv~~hG~---~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~l~~~-- 116 (322)
.....|..|++|.- +|+... .-..++..|.+. |.++.+|+||-|.|.+. .......+.+..+.++++....+
T Consensus 24 ~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 24 KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCch
Confidence 34667788888853 222211 245566777777 99999999999999877 23333333344444555544332
Q ss_pred cEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKP 196 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (322)
...+.|+|+|+++++.+|.+.|+ ....+.+.+.....
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~------------------------------------------ 140 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY------------------------------------------ 140 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCch------------------------------------------
Confidence 24689999999999999999886 55555554433100
Q ss_pred CCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEc
Q 042555 197 VRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIE 276 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (322)
....+....+|.++|+|+.|.+++....-++++.. ..++++++
T Consensus 141 -----------------------------------dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~ 183 (210)
T COG2945 141 -----------------------------------DFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIP 183 (210)
T ss_pred -----------------------------------hhhhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEec
Confidence 11123456789999999999999998888888774 57889999
Q ss_pred CCCccccccChHHHHHHHHHHHh
Q 042555 277 NTGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 277 ~~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
+++|+++-. -..+.+.|.+|+.
T Consensus 184 ~a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred CCCceeccc-HHHHHHHHHHHhh
Confidence 999997754 5678899999995
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=99.72 E-value=5.7e-16 Score=113.67 Aligned_cols=176 Identities=22% Similarity=0.289 Sum_probs=120.8
Q ss_pred CCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCC--CCC----CCCCCCCCCHHHH-------HHHHHHH
Q 042555 43 KFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVF--FGE----SYTTRADRTESFQ-------ARCVMRL 109 (322)
Q Consensus 43 ~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G--~G~----s~~~~~~~~~~~~-------~~~~~~~ 109 (322)
.++++..|+||++||+|++. .++.++...+..++.++.+.=+= .|. +......++.++. ++-+..+
T Consensus 12 ~~~~p~~~~iilLHG~Ggde-~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDE-LDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCCCCcEEEEEecCCCCh-hhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 34566778999999999888 46888777777776666653221 010 0011122333333 3334444
Q ss_pred HHHhcc--ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHH
Q 042555 110 MEVFCV--KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLI 187 (322)
Q Consensus 110 l~~l~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (322)
.+..+. ++++++|+|.||.+++.+..++|..+++++++++........
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~------------------------------ 140 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL------------------------------ 140 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc------------------------------
Confidence 444454 799999999999999999999999999999998866433110
Q ss_pred HhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc
Q 042555 188 RFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG 267 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 267 (322)
.-..-..|+++++|+.|+++|...+.++.+.+.
T Consensus 141 -----------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~ 173 (207)
T COG0400 141 -----------------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLT 173 (207)
T ss_pred -----------------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHH
Confidence 001225799999999999999998888877763
Q ss_pred ---CCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 268 ---ESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 268 ---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
.+++...++ .||....+ -.+.+.+|+.+.
T Consensus 174 ~~g~~v~~~~~~-~GH~i~~e----~~~~~~~wl~~~ 205 (207)
T COG0400 174 ASGADVEVRWHE-GGHEIPPE----ELEAARSWLANT 205 (207)
T ss_pred HcCCCEEEEEec-CCCcCCHH----HHHHHHHHHHhc
Confidence 567888888 79987443 445666677653
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.68 E-value=2.3e-16 Score=123.13 Aligned_cols=124 Identities=13% Similarity=0.134 Sum_probs=87.8
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHH-HHhh-hcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGE-FLRH-FTPR-FNVYVPDLVFFGESYTTRADRTESFQA 103 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~-~~~~-l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~ 103 (322)
..+...++..+.+... ++++|++|++||++++....|.. +.+. |.+. ++|+++|++|++.+..+....+....+
T Consensus 17 ~~~~~~~~~~~~~~~f---~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~ 93 (275)
T cd00707 17 QLLFADDPSSLKNSNF---NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVG 93 (275)
T ss_pred eEecCCChhhhhhcCC---CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHH
Confidence 3444444555555554 46688999999999887324544 4443 4434 999999999884432222223445555
Q ss_pred HHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 104 RCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 104 ~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
+++..+++.+ +.+++++||||+||.+|..++.++|++|.++++++|+.+.
T Consensus 94 ~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 94 AELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred HHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 6666666654 3578999999999999999999999999999999987644
No 96
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.67 E-value=4.7e-15 Score=109.31 Aligned_cols=237 Identities=17% Similarity=0.158 Sum_probs=149.4
Q ss_pred ecCCCceEE--EEEeCCceEEEEEecCC--CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCC-
Q 042555 19 FSNAGLRST--STDLGDGTVMQCWVPKF--PKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTT- 93 (322)
Q Consensus 19 ~~~~~~~~~--~i~~~~g~~l~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~- 93 (322)
+....++-. +++-.+|.+|+-|..-| ..++.|.||-.||+++... .|..+...-...|.|+.+|.||.|.|+..
T Consensus 49 ~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g-~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt 127 (321)
T COG3458 49 FTLPRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG-EWHDMLHWAVAGYAVFVMDVRGQGSSSQDT 127 (321)
T ss_pred ccCCceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC-CccccccccccceeEEEEecccCCCccccC
Confidence 334444433 34445788888666543 2356789999999999985 58777776667799999999999988431
Q ss_pred ---C-C----------------CCCHHHHHHHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeee
Q 042555 94 ---R-A----------------DRTESFQARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLC 147 (322)
Q Consensus 94 ---~-~----------------~~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~ 147 (322)
. . .+-+.....|+..+++.+ +-++|.+.|.|.||.+++.+++..| +|++++..
T Consensus 128 ~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~ 206 (321)
T COG3458 128 ADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVAD 206 (321)
T ss_pred CCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhccccc
Confidence 1 0 011112234444444443 4578999999999999999998877 79999988
Q ss_pred ccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHH
Q 042555 148 CSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETI 227 (322)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (322)
-|..+.-+.. ........-..+..+++. ........+..+
T Consensus 207 ~Pfl~df~r~--------------i~~~~~~~ydei~~y~k~--------------------------h~~~e~~v~~TL 246 (321)
T COG3458 207 YPFLSDFPRA--------------IELATEGPYDEIQTYFKR--------------------------HDPKEAEVFETL 246 (321)
T ss_pred ccccccchhh--------------eeecccCcHHHHHHHHHh--------------------------cCchHHHHHHHH
Confidence 8766433211 000000111111111110 000112222222
Q ss_pred hcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 228 LKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 228 ~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
...+.......+++|+|+..|-.|+++|+...-..++.+...+++.+++.-+|.- -|.-..+.+..|+..
T Consensus 247 ~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~---~p~~~~~~~~~~l~~ 316 (321)
T COG3458 247 SYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEG---GPGFQSRQQVHFLKI 316 (321)
T ss_pred hhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccccc---CcchhHHHHHHHHHh
Confidence 2233344456789999999999999999999999999997777888888767764 343344555666654
No 97
>PRK10115 protease 2; Provisional
Probab=99.67 E-value=1.1e-14 Score=127.50 Aligned_cols=217 Identities=15% Similarity=0.064 Sum_probs=136.9
Q ss_pred CceEEEEEeCCceEEEEE-ecCC---CCCCCCeEEEEcCCCCchh-hcHHHHHhhhcCC-ceEEeecCCCCCCCCCC---
Q 042555 23 GLRSTSTDLGDGTVMQCW-VPKF---PKILKPNLLLLHGFGANAM-WQYGEFLRHFTPR-FNVYVPDLVFFGESYTT--- 93 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~-~~~~---~~~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~--- 93 (322)
..+..+++..||.++.++ ..++ .+++.|+||++||..+... ..|......|..+ |.|+.++.||-|.-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~ 494 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYE 494 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHH
Confidence 345666777899999863 3332 2455699999999776652 1355545555555 99999999986544321
Q ss_pred -----CCCCCHHHHHHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCcc
Q 042555 94 -----RADRTESFQARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVT 166 (322)
Q Consensus 94 -----~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (322)
....+++++++.+..+++.- ..+++.+.|.|.||+++..++.++|++++++|...|..+....-...
T Consensus 495 ~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~------ 568 (686)
T PRK10115 495 DGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE------ 568 (686)
T ss_pred hhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC------
Confidence 22345555555555444431 35789999999999999999999999999999998876433110000
Q ss_pred ccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCc-EEE
Q 042555 167 DIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQ-TLI 245 (322)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vl~ 245 (322)
..+..... . ..+. .+ . . ......+....+...+.+++.| +|+
T Consensus 569 -----------~~p~~~~~-~-~e~G--~p-----~--------------~---~~~~~~l~~~SP~~~v~~~~~P~lLi 611 (686)
T PRK10115 569 -----------SIPLTTGE-F-EEWG--NP-----Q--------------D---PQYYEYMKSYSPYDNVTAQAYPHLLV 611 (686)
T ss_pred -----------CCCCChhH-H-HHhC--CC-----C--------------C---HHHHHHHHHcCchhccCccCCCceeE
Confidence 00000000 0 0001 00 0 0 0011111222255566778889 567
Q ss_pred EEeCCCCCCChHHHHHHHHHhc---CCcEEEEE---cCCCccc
Q 042555 246 IWGEQDQIFPLELGHRLKRHIG---ESARLVII---ENTGHAV 282 (322)
Q Consensus 246 i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~---~~~gH~~ 282 (322)
++|.+|..||+....++...+. .+.+.+++ +++||..
T Consensus 612 ~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 612 TTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred EecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 7999999999999999888873 34566777 8999984
No 98
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=2.2e-15 Score=108.35 Aligned_cols=256 Identities=15% Similarity=0.092 Sum_probs=146.6
Q ss_pred EEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC---CCCCHHHH
Q 042555 27 TSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR---ADRTESFQ 102 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~---~~~~~~~~ 102 (322)
..+...||..+....++..++....|+.-.+.+... ..|+.++..+++. |.|+.+|+||.|.|.... ..+.+.++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 456778999998888764333333444444445454 5699999999888 999999999999998763 34666666
Q ss_pred H-HHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccc-cccCCCCccccchhhhccc
Q 042555 103 A-RCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEEND-MEEGLFPVTDIDEAANILV 176 (322)
Q Consensus 103 ~-~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 176 (322)
+ .|+.+.++.+ ...+...||||+||.+.-.+. +++ +..+....+........- ....+.... ......
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~----l~~lv~ 160 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVL----LWNLVG 160 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccchhhhhccccee----eccccc
Confidence 5 3666666655 346899999999998766554 344 455555444433322110 000000000 000000
Q ss_pred CCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCCh
Q 042555 177 PQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPL 256 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~ 256 (322)
+. ...+...+...+. .-....+....+++...............+.. ..+....+++|++.+...+|+.+|+
T Consensus 161 p~-lt~w~g~~p~~l~--G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~-----~~q~yaaVrtPi~~~~~~DD~w~P~ 232 (281)
T COG4757 161 PP-LTFWKGYMPKDLL--GLGSDLPGTVMRDWARWCRHPRYYFDDPAMRN-----YRQVYAAVRTPITFSRALDDPWAPP 232 (281)
T ss_pred cc-hhhccccCcHhhc--CCCccCcchHHHHHHHHhcCccccccChhHhH-----HHHHHHHhcCceeeeccCCCCcCCH
Confidence 00 0011111111111 01113444444444332221100000000000 2223457799999999999999999
Q ss_pred HHHHHHHHHhcCCcEE--EEEcC----CCccccccCh-HHHHHHHHHHH
Q 042555 257 ELGHRLKRHIGESARL--VIIEN----TGHAVNLEKP-KELLKHLKSFL 298 (322)
Q Consensus 257 ~~~~~~~~~~~~~~~~--~~~~~----~gH~~~~~~~-~~~~~~i~~fl 298 (322)
...+.+.+.. .|+.+ ..++. -||+-...++ |.+.+.+.+|+
T Consensus 233 As~d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 233 ASRDAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9999999888 66543 33433 5899888877 77888887776
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.65 E-value=2e-14 Score=104.46 Aligned_cols=219 Identities=15% Similarity=0.273 Sum_probs=119.3
Q ss_pred EEEEEeCCceEEEEEecCCCC---CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCC-CCCCCCCCCCCHH
Q 042555 26 STSTDLGDGTVMQCWVPKFPK---ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFF-GESYTTRADRTES 100 (322)
Q Consensus 26 ~~~i~~~~g~~l~~~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~-G~s~~~~~~~~~~ 100 (322)
.+.+.+.+|..|++|...|.. ...++||+.+|++...+ .|..++.+|+.+ |+|+.+|--.| |.|++....+++.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmd-h~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMD-HFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGG-GGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred cceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHH-HHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 467888999999999876543 34579999999999996 599999999998 99999998876 9999888889999
Q ss_pred HHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccC
Q 042555 101 FQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVP 177 (322)
Q Consensus 101 ~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (322)
...+++..+++++ |..++.++.-|+.|.+|+..|++- .+.-+|..-+.....
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnlr----------------------- 137 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNLR----------------------- 137 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-HH-----------------------
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeHH-----------------------
Confidence 9889988888776 678899999999999999999854 377777666544222
Q ss_pred CChHHHHHHHHhhhcCCCCCCCCCchh--------HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeC
Q 042555 178 QTPDKLRDLIRFSFVNSKPVRGVPSCF--------LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGE 249 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 249 (322)
..+.+.+...+.. .+....+... .+.+.............. ....++.+.+|++.++++
T Consensus 138 ---~TLe~al~~Dyl~-~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~S---------T~~~~k~l~iP~iaF~A~ 204 (294)
T PF02273_consen 138 ---DTLEKALGYDYLQ-LPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDS---------TINDMKRLSIPFIAFTAN 204 (294)
T ss_dssp ---HHHHHHHSS-GGG-S-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHH---------HHHHHTT--S-EEEEEET
T ss_pred ---HHHHHHhccchhh-cchhhCCCcccccccccchHHHHHHHHHcCCccchh---------HHHHHhhCCCCEEEEEeC
Confidence 1111221111110 0001111000 011111111111111111 223456779999999999
Q ss_pred CCCCCChHHHHHHHHHhc-CCcEEEEEcCCCcccc
Q 042555 250 QDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVN 283 (322)
Q Consensus 250 ~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 283 (322)
+|.++......++...+. +.+++..++|++|..-
T Consensus 205 ~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 205 DDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp T-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred CCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 999999999999888764 5678999999999853
No 100
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.65 E-value=4.9e-14 Score=102.31 Aligned_cols=180 Identities=22% Similarity=0.298 Sum_probs=110.8
Q ss_pred EEEEcCCCCchhhcHH--HHHhhhcCC---ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchh
Q 042555 52 LLLLHGFGANAMWQYG--EFLRHFTPR---FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYG 126 (322)
Q Consensus 52 vv~~hG~~~~~~~~~~--~~~~~l~~~---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~G 126 (322)
|+++||+.++.. +.. .+.+.+++. ..+.++|++ .......+.+.++++....+.+.|+|.|+|
T Consensus 2 ilYlHGF~Ssp~-S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~~~~~~~liGSSlG 69 (187)
T PF05728_consen 2 ILYLHGFNSSPQ-SFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEELKPENVVLIGSSLG 69 (187)
T ss_pred eEEecCCCCCCC-CHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhCCCCCeEEEEEChH
Confidence 799999999874 343 233445443 567777765 456777888889999888777999999999
Q ss_pred HHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHH
Q 042555 127 GFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLT 206 (322)
Q Consensus 127 g~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (322)
|..|..+|.+++ +++ |+++|+..+... +...+..... ....+.+.
T Consensus 70 G~~A~~La~~~~--~~a-vLiNPav~p~~~--------------------------l~~~iG~~~~-----~~~~e~~~- 114 (187)
T PF05728_consen 70 GFYATYLAERYG--LPA-VLINPAVRPYEL--------------------------LQDYIGEQTN-----PYTGESYE- 114 (187)
T ss_pred HHHHHHHHHHhC--CCE-EEEcCCCCHHHH--------------------------HHHhhCcccc-----CCCCccce-
Confidence 999999999986 444 889987754321 1111111000 00000000
Q ss_pred hhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccC
Q 042555 207 DFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEK 286 (322)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 286 (322)
+ .......+.. .......-..+++++.++.|.+++...+. +.. .++..++.+|++|-+ ++
T Consensus 115 -~-----------~~~~~~~l~~--l~~~~~~~~~~~lvll~~~DEvLd~~~a~---~~~-~~~~~~i~~ggdH~f--~~ 174 (187)
T PF05728_consen 115 -L-----------TEEHIEELKA--LEVPYPTNPERYLVLLQTGDEVLDYREAV---AKY-RGCAQIIEEGGDHSF--QD 174 (187)
T ss_pred -e-----------chHhhhhcce--EeccccCCCccEEEEEecCCcccCHHHHH---HHh-cCceEEEEeCCCCCC--cc
Confidence 0 0000000000 01111233568999999999999985443 444 445566778889986 45
Q ss_pred hHHHHHHHHHHH
Q 042555 287 PKELLKHLKSFL 298 (322)
Q Consensus 287 ~~~~~~~i~~fl 298 (322)
-++....|.+|+
T Consensus 175 f~~~l~~i~~f~ 186 (187)
T PF05728_consen 175 FEEYLPQIIAFL 186 (187)
T ss_pred HHHHHHHHHHhh
Confidence 567777888886
No 101
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.63 E-value=2e-14 Score=110.60 Aligned_cols=116 Identities=25% Similarity=0.378 Sum_probs=97.3
Q ss_pred CceEEEEEecCCC----CCCCCeEEEEcCCCCchhhcHHHHHhhhcC--------C--ceEEeecCCCCCCCCCC-CCCC
Q 042555 33 DGTVMQCWVPKFP----KILKPNLLLLHGFGANAMWQYGEFLRHFTP--------R--FNVYVPDLVFFGESYTT-RADR 97 (322)
Q Consensus 33 ~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~--------~--~~v~~~d~~G~G~s~~~-~~~~ 97 (322)
.|.++|+....+. .+.-.|++++|||+|+-. .|..+++.|.. . |.||++.+||+|-|+.+ ....
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~-EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GF 210 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVR-EFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGF 210 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHH-HHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCc
Confidence 7888998776432 122348999999999994 68888887753 2 78999999999999987 5678
Q ss_pred CHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 98 TESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 98 ~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
+....|.-+..++=.+|.+++.|-|-.||+.++..+|..+|+.|.|+=+--+
T Consensus 211 n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 211 NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 8888899999999999999999999999999999999999999988755433
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.62 E-value=1e-13 Score=107.62 Aligned_cols=105 Identities=17% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhc----CCceEEeecCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhc----
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFT----PRFNVYVPDLVFFGESYTT------RADRTESFQARCVMRLMEVFC---- 114 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~----~~~~v~~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~l~~l~---- 114 (322)
+..+||++|.+|-.++ |..++..|. .++.|+++.+.||-.++.. ...++++++++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 3579999999999986 988887765 3499999999999777653 457899999988888887652
Q ss_pred --cccEEEEEEchhHHHHHHHHHhcc---cccceeeeeccCCCCC
Q 042555 115 --VKRMSLVGISYGGFVGYSLAAQFP---KVLEKVVLCCSGVCLE 154 (322)
Q Consensus 115 --~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~ 154 (322)
..+++++|||.|++++++++.+.+ .+|.+++++-|....-
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 357999999999999999999999 7899999998876443
No 103
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.62 E-value=8.2e-14 Score=112.15 Aligned_cols=279 Identities=12% Similarity=0.081 Sum_probs=161.6
Q ss_pred CCCceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHH------HHhhhcCC-ceEEeecCCCCCCCCCC
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGE------FLRHFTPR-FNVYVPDLVFFGESYTT 93 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~------~~~~l~~~-~~v~~~d~~G~G~s~~~ 93 (322)
..+.|++.|++.||..+...+.+.+++++|+|++.||+.+++. .|-. ++-.|+.+ |+|+.-+.||.-.|...
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~-~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h 123 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSS-SWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKH 123 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccc-cceecCccccHHHHHHHcCCceeeecCcCcccchhh
Confidence 4567899999999987777666544588899999999998885 4643 34456666 99999999997666422
Q ss_pred ----------CCCCCHHHHH-HHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhccc---ccceeeeeccCCCCCc
Q 042555 94 ----------RADRTESFQA-RCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK---VLEKVVLCCSGVCLEE 155 (322)
Q Consensus 94 ----------~~~~~~~~~~-~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~~~~~ 155 (322)
.-.+++.+++ -|+-+.++.. +.++++.+|||.|+.....++...|+ +|+..++++|......
T Consensus 124 ~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~ 203 (403)
T KOG2624|consen 124 KKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKH 203 (403)
T ss_pred cccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcc
Confidence 1234566654 3666666554 67899999999999999999988865 7999999999885441
Q ss_pred cc-cccCCCCcc-ccchhhhcccCC----------------------ChHHHHHHHHhhhcCCCC---------------
Q 042555 156 ND-MEEGLFPVT-DIDEAANILVPQ----------------------TPDKLRDLIRFSFVNSKP--------------- 196 (322)
Q Consensus 156 ~~-~~~~~~~~~-~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~--------------- 196 (322)
.. ......... ........+... ....+.........+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~ 283 (403)
T KOG2624|consen 204 IKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHL 283 (403)
T ss_pred cccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccC
Confidence 10 000000000 000000000000 000010000000000000
Q ss_pred CCCCCchhHHhhHHHhhhhhhhh----HHHHHHHHhc-ccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcE
Q 042555 197 VRGVPSCFLTDFIDVMCTEYVQE----KRELIETILK-DRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESAR 271 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 271 (322)
+..........+.+......... .......+.. ..+...+.++++|+.+.+|++|.++.++.+..+...+ +++.
T Consensus 284 pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~-~~~~ 362 (403)
T KOG2624|consen 284 PAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVL-PNSV 362 (403)
T ss_pred CCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhc-cccc
Confidence 00001111111111110000000 0000000000 1145567788999999999999999999999888777 5544
Q ss_pred EEE---EcCCCccccc---cChHHHHHHHHHHHhcc
Q 042555 272 LVI---IENTGHAVNL---EKPKELLKHLKSFLIVD 301 (322)
Q Consensus 272 ~~~---~~~~gH~~~~---~~~~~~~~~i~~fl~~~ 301 (322)
... +++-.|.-++ +.++++.+.|.+.++..
T Consensus 363 ~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred ccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 322 6888887654 45788888888888754
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.60 E-value=3.1e-14 Score=109.00 Aligned_cols=232 Identities=15% Similarity=0.160 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCCchhh--cHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------ccc
Q 042555 48 LKPNLLLLHGFGANAMW--QYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF--------CVK 116 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l--------~~~ 116 (322)
....||||.|++.+... ....+++.|.+. |.++-+-++. |.......+++..++||.++++.+ +.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS---Sy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~ 108 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS---SYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGRE 108 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG---GBTTS-S--HHHHHHHHHHHHHHHHHHS------S
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC---ccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCc
Confidence 45589999998775421 367788889765 9998888752 111123347788888888888765 246
Q ss_pred cEEEEEEchhHHHHHHHHHhcc-----cccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhh
Q 042555 117 RMSLVGISYGGFVGYSLAAQFP-----KVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSF 191 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (322)
+|+|+|||.|+.-+++|+.... ..|+++|+-+|..+.......... ........+..+...
T Consensus 109 kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~--------------~~~~~~~v~~A~~~i 174 (303)
T PF08538_consen 109 KIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE--------------REAYEELVALAKELI 174 (303)
T ss_dssp -EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH-----------------HHHHHHHHHHHH
T ss_pred cEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc--------------hHHHHHHHHHHHHHH
Confidence 8999999999999999998753 569999999997765432210000 001111111111111
Q ss_pred cCCCCCCCCCchhH-----------HhhHHHhhhhhhhhHHHHHH-HHhcccccCCCCCCCCcEEEEEeCCCCCCChHH-
Q 042555 192 VNSKPVRGVPSCFL-----------TDFIDVMCTEYVQEKRELIE-TILKDRKFCNLPKIAQQTLIIWGEQDQIFPLEL- 258 (322)
Q Consensus 192 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~- 258 (322)
...+....++.... ..+..-.. ......++. .+........+..+.+|+|++.+++|..+|...
T Consensus 175 ~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s---~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vd 251 (303)
T PF08538_consen 175 AEGKGDEILPREFTPLVFYDTPITAYRFLSLAS---PGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVD 251 (303)
T ss_dssp HCT-TT-GG----GGTTT-SS---HHHHHT-S----SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-------
T ss_pred HcCCCCceeeccccccccCCCcccHHHHHhccC---CCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccc
Confidence 11111111111111 11111000 011111121 222222445677888899999999999998752
Q ss_pred HHHHHHHhc---C----CcEEEEEcCCCccccccCh----HHHHHHHHHHHh
Q 042555 259 GHRLKRHIG---E----SARLVIIENTGHAVNLEKP----KELLKHLKSFLI 299 (322)
Q Consensus 259 ~~~~~~~~~---~----~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl~ 299 (322)
.+.+.+++. + ...-.++||++|.+--+.. +.+.+.|.+||+
T Consensus 252 k~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 252 KEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 223333331 1 1234589999999865432 346777777774
No 105
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.58 E-value=1.5e-14 Score=89.28 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=65.9
Q ss_pred ceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHH
Q 042555 34 GTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT-RADRTESFQARCVMRLME 111 (322)
Q Consensus 34 g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~ 111 (322)
|.+|+++.+.|.++.+.+|+++||++..+.. |..+++.|+++ |.|+++|+||||.|... ....+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~r-y~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGR-YAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHH-HHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 5678888887655557799999999999974 99999999998 99999999999999865 344688999999998764
No 106
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.53 E-value=2.7e-12 Score=87.02 Aligned_cols=181 Identities=16% Similarity=0.181 Sum_probs=127.0
Q ss_pred CCCeEEEEcCCCCchhh-cHHHHHhhhcCC-ceEEeecCCCC-----CCCCCC-CCCCCHHHHHHHHHHHHHHhccccEE
Q 042555 48 LKPNLLLLHGFGANAMW-QYGEFLRHFTPR-FNVYVPDLVFF-----GESYTT-RADRTESFQARCVMRLMEVFCVKRMS 119 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~-----G~s~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~ 119 (322)
..-+||+-||.+.+.+. .....+..|+.. +.|..|+++-. |...++ ....-..++...+.++...+.-.+++
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi 92 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLI 92 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCcee
Confidence 34478888998876643 356777888887 99999998753 322222 23334456677777777777767999
Q ss_pred EEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCC
Q 042555 120 LVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRG 199 (322)
Q Consensus 120 lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (322)
+-|+||||.++..++..-...|+++++++-++.....
T Consensus 93 ~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGK------------------------------------------- 129 (213)
T COG3571 93 IGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGK------------------------------------------- 129 (213)
T ss_pred eccccccchHHHHHHHhhcCCcceEEEecCccCCCCC-------------------------------------------
Confidence 9999999999999988766669999998765533211
Q ss_pred CCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCC
Q 042555 200 VPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTG 279 (322)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~g 279 (322)
++.. ....+..+++|++|.+|+.|.+-..+.+.... +.+..+++.++++.
T Consensus 130 -Pe~~---------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~ad 179 (213)
T COG3571 130 -PEQL---------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDAD 179 (213)
T ss_pred -cccc---------------------------hhhhccCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCc
Confidence 1111 12346688999999999999998777664332 33778999999999
Q ss_pred ccccc----------cChHHHHHHHHHHHhcc
Q 042555 280 HAVNL----------EKPKELLKHLKSFLIVD 301 (322)
Q Consensus 280 H~~~~----------~~~~~~~~~i~~fl~~~ 301 (322)
|..-- ++-...++.|..|+.+.
T Consensus 180 HDLkp~k~vsgls~~~hL~~~A~~va~~~~~l 211 (213)
T COG3571 180 HDLKPRKLVSGLSTADHLKTLAEQVAGWARRL 211 (213)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHhhc
Confidence 97532 12344667777787653
No 107
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.53 E-value=6.5e-13 Score=104.49 Aligned_cols=122 Identities=23% Similarity=0.189 Sum_probs=81.5
Q ss_pred CceEEEEEecCC---CCCCCCeEEEEcCCCCchhhcHHHH---Hh------hhcCC-ceEEeecCCCCCCCCCCCCCCCH
Q 042555 33 DGTVMQCWVPKF---PKILKPNLLLLHGFGANAMWQYGEF---LR------HFTPR-FNVYVPDLVFFGESYTTRADRTE 99 (322)
Q Consensus 33 ~g~~l~~~~~~~---~~~~~~~vv~~hG~~~~~~~~~~~~---~~------~l~~~-~~v~~~d~~G~G~s~~~~~~~~~ 99 (322)
||.+|....+.| ..++.|+||..|+++.......... .. .+.++ |.|+..|.||.|.|....... .
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-S 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-S
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-C
Confidence 678888766654 4556788999999986541111111 01 15555 999999999999999774433 3
Q ss_pred HHHHHHHHHHHHHhc-----cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCc
Q 042555 100 SFQARCVMRLMEVFC-----VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEE 155 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 155 (322)
..-++|..++|+.+. ..+|.++|.|++|..++.+|...|..+++++...+..+...
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 344666666666652 25899999999999999999988889999999887665543
No 108
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.53 E-value=5.1e-13 Score=100.54 Aligned_cols=172 Identities=19% Similarity=0.225 Sum_probs=113.2
Q ss_pred CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----h-----
Q 042555 45 PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV-----F----- 113 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-----l----- 113 (322)
..++-|+|||+||+.....+ |..+.++++.. |-|+++|+...+.... ..... .+..+.+++.. +
T Consensus 13 ~~g~yPVv~f~~G~~~~~s~-Ys~ll~hvAShGyIVV~~d~~~~~~~~~---~~~~~-~~~~vi~Wl~~~L~~~l~~~v~ 87 (259)
T PF12740_consen 13 SAGTYPVVLFLHGFLLINSW-YSQLLEHVASHGYIVVAPDLYSIGGPDD---TDEVA-SAAEVIDWLAKGLESKLPLGVK 87 (259)
T ss_pred CCCCcCEEEEeCCcCCCHHH-HHHHHHHHHhCceEEEEecccccCCCCc---chhHH-HHHHHHHHHHhcchhhcccccc
Confidence 45778999999999977764 99999999999 9999999765333211 11111 12222222211 1
Q ss_pred -ccccEEEEEEchhHHHHHHHHHhc-----ccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHH
Q 042555 114 -CVKRMSLVGISYGGFVGYSLAAQF-----PKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLI 187 (322)
Q Consensus 114 -~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (322)
+..++.|.|||-||-+|..++..+ +.+++++++++|.-......
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~------------------------------ 137 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGS------------------------------ 137 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccccccc------------------------------
Confidence 346899999999999999999887 55899999999865322110
Q ss_pred HhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCC---------CCCh-H
Q 042555 188 RFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQ---------IFPL-E 257 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~---------~~~~-~ 257 (322)
........ ....--+.++|+++|....+. ..|. .
T Consensus 138 -----------~~~P~v~~-------------------------~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~ 181 (259)
T PF12740_consen 138 -----------QTEPPVLT-------------------------YTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGV 181 (259)
T ss_pred -----------CCCCcccc-------------------------CcccccCCCCCeEEEecccCcccccccCCCCCCCCC
Confidence 00000000 001111346899999877764 2232 2
Q ss_pred HHHHHHHHhcCCcEEEEEcCCCccccccCh
Q 042555 258 LGHRLKRHIGESARLVIIENTGHAVNLEKP 287 (322)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~ 287 (322)
..+++++...+.+-..+..+.||+-+++..
T Consensus 182 n~~~Ff~~~~~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 182 NYREFFDECKPPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CHHHHHHhcCCCEEEEEeCCCCchHhhcCC
Confidence 667777777666677778899999988765
No 109
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.52 E-value=1.5e-12 Score=124.38 Aligned_cols=101 Identities=16% Similarity=0.120 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcc-ccEEEEEEchh
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCV-KRMSLVGISYG 126 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~lvGhS~G 126 (322)
.+++++++||++++.. .|..+.+.|...+.|++++.||+|.+. ...++++++++++.+.++.+.. .+++++|||+|
T Consensus 1067 ~~~~l~~lh~~~g~~~-~~~~l~~~l~~~~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~G 1143 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAW-QFSVLSRYLDPQWSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLG 1143 (1296)
T ss_pred CCCCeEEecCCCCchH-HHHHHHHhcCCCCcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechh
Confidence 3578999999999985 699999999888999999999998663 3468999999999999988754 58999999999
Q ss_pred HHHHHHHHHh---cccccceeeeeccCC
Q 042555 127 GFVGYSLAAQ---FPKVLEKVVLCCSGV 151 (322)
Q Consensus 127 g~~a~~~a~~---~p~~v~~lil~~~~~ 151 (322)
|.+|.++|.+ .++++..++++++..
T Consensus 1144 g~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1144 GTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 9999999986 477899999998643
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.52 E-value=2.1e-13 Score=118.26 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=85.3
Q ss_pred EEEeCCceEEEEEecCCC-------CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC------
Q 042555 28 STDLGDGTVMQCWVPKFP-------KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT------ 93 (322)
Q Consensus 28 ~i~~~~g~~l~~~~~~~~-------~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~------ 93 (322)
.+..+++.++.|...+.+ ....|+|||+||++++.+ .|..+++.|.+. |+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~-~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKE-NALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHH-HHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 455568887877765322 123468999999999996 599999999865 99999999999999432
Q ss_pred ----CC-------------CCCHHHHHHHHHHHHHHhc----------------cccEEEEEEchhHHHHHHHHHhc
Q 042555 94 ----RA-------------DRTESFQARCVMRLMEVFC----------------VKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 94 ----~~-------------~~~~~~~~~~~~~~l~~l~----------------~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.. ..++...+.|+..+...+. ..+++++||||||.++..++...
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 01 1267888899988887775 35899999999999999999764
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.51 E-value=6e-12 Score=87.31 Aligned_cols=173 Identities=12% Similarity=0.045 Sum_probs=117.0
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHH
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFV 129 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~ 129 (322)
+.+|++||+.++....|....+.=. -.+-.+++. ....-..+++++.+...+... .++++||+||+|+..
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l--~~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~ 72 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESAL--PNARRVEQD-------DWEAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCAT 72 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhC--ccchhcccC-------CCCCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHH
Confidence 5689999998887655665433211 223333332 124457888888888888887 467999999999999
Q ss_pred HHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhH
Q 042555 130 GYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFI 209 (322)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
+++++.+....|+|+++++|+-...+... ......+
T Consensus 73 v~h~~~~~~~~V~GalLVAppd~~~~~~~--------------------------~~~~~tf------------------ 108 (181)
T COG3545 73 VAHWAEHIQRQVAGALLVAPPDVSRPEIR--------------------------PKHLMTF------------------ 108 (181)
T ss_pred HHHHHHhhhhccceEEEecCCCccccccc--------------------------hhhcccc------------------
Confidence 99999988779999999998653221100 0000000
Q ss_pred HHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcccccc---C
Q 042555 210 DVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLE---K 286 (322)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~---~ 286 (322)
.........-|.+++.+++|++++.+.++.+++.+ ...++.+..+||+--.+ .
T Consensus 109 ----------------------~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~ 164 (181)
T COG3545 109 ----------------------DPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGP 164 (181)
T ss_pred ----------------------CCCccccCCCceeEEEecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCC
Confidence 11112234568999999999999999999999998 56778888889975432 2
Q ss_pred hHHHHHHHHHHHhc
Q 042555 287 PKELLKHLKSFLIV 300 (322)
Q Consensus 287 ~~~~~~~i~~fl~~ 300 (322)
-.+....+.+|+.+
T Consensus 165 wpeg~~~l~~~~s~ 178 (181)
T COG3545 165 WPEGYALLAQLLSR 178 (181)
T ss_pred cHHHHHHHHHHhhh
Confidence 23455666666654
No 112
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.50 E-value=2.5e-12 Score=113.62 Aligned_cols=225 Identities=12% Similarity=0.065 Sum_probs=121.3
Q ss_pred HHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--------------------cccEEEEEEchhH
Q 042555 69 FLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC--------------------VKRMSLVGISYGG 127 (322)
Q Consensus 69 ~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~--------------------~~~~~lvGhS~Gg 127 (322)
+.+.+.++ |.|+.+|.||+|.|++........ -.+|..++|+.+. ..+|.++|.|+||
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~-E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQ-EIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHH-HHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 34556666 999999999999998764433333 3566666666663 3689999999999
Q ss_pred HHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHh
Q 042555 128 FVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTD 207 (322)
Q Consensus 128 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (322)
.+++.+|...|..++++|..++...........+...... .........+................. ......
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~------g~~ged~d~l~~~~~~r~~~~~~~~~~-~~~~~~ 422 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPG------GYQGEDLDVLAELTYSRNLLAGDYLRH-NEACEK 422 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccC------CcCCcchhhHHHHhhhcccCcchhhcc-hHHHHH
Confidence 9999999998889999999877643221100000000000 000001111111110000000000000 000011
Q ss_pred hHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCccccc
Q 042555 208 FIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNL 284 (322)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~ 284 (322)
....+...........-..+...+....+.+|++|+|+++|..|..++.....++++.+. ...++.+.+ ++|....
T Consensus 423 ~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~ 501 (767)
T PRK05371 423 LLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPN 501 (767)
T ss_pred HHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCC
Confidence 100000000000000000111122345567899999999999999999888877777762 245665554 5786433
Q ss_pred -cChHHHHHHHHHHHhccC
Q 042555 285 -EKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 285 -~~~~~~~~~i~~fl~~~~ 302 (322)
..+.++.+.+.+|+....
T Consensus 502 ~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 502 NWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred chhHHHHHHHHHHHHHhcc
Confidence 344566777788886653
No 113
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.49 E-value=8.6e-13 Score=104.11 Aligned_cols=228 Identities=15% Similarity=0.141 Sum_probs=133.0
Q ss_pred CCCeEEEEcCCCCchhhcH-----HHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH-H----HHHHHHHHhccc
Q 042555 48 LKPNLLLLHGFGANAMWQY-----GEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQA-R----CVMRLMEVFCVK 116 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-~----~~~~~l~~l~~~ 116 (322)
-++|++++|-+-... +.+ ..++..|.++ +.|+.+++++-..+.. ..++++++ + .+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~-yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKF-YILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCce-eEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 367899999977654 223 3466666666 9999999987555543 45566655 3 444444555779
Q ss_pred cEEEEEEchhHHHHHHHHHhcccc-cceeeeeccCCCCCccccccCCCCccc------------------cchhhhcccC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFPKV-LEKVVLCCSGVCLEENDMEEGLFPVTD------------------IDEAANILVP 177 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lil~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~ 177 (322)
+|.++|+|.||.++..+++.++.+ |++++++.+..++........+..... +......+.+
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999999887 999999998888765331111111100 0001111111
Q ss_pred CChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcc-----------cccCCCCCCCCcEEEE
Q 042555 178 QTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKD-----------RKFCNLPKIAQQTLII 246 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~i~~Pvl~i 246 (322)
.. -.+..+.........+ .+ .-...+.....+........+++.+... ...-++.+|+||++.+
T Consensus 262 nd-liw~~fV~nyl~ge~p---l~-fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~ 336 (445)
T COG3243 262 ND-LIWNYFVNNYLDGEQP---LP-FDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNL 336 (445)
T ss_pred cc-cchHHHHHHhcCCCCC---Cc-hhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEE
Confidence 10 0011111111111011 11 1111111111111111222222222211 1556788999999999
Q ss_pred EeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcccccc
Q 042555 247 WGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLE 285 (322)
Q Consensus 247 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 285 (322)
.|++|.++|++.+....+.++.+++++.. ++||...+-
T Consensus 337 a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~vV 374 (445)
T COG3243 337 AAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGVV 374 (445)
T ss_pred eecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEEe
Confidence 99999999999999999999443565555 679986553
No 114
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.48 E-value=1.4e-11 Score=96.02 Aligned_cols=235 Identities=14% Similarity=0.156 Sum_probs=130.4
Q ss_pred CCCCeEEEEcCCCCchhhcHHH--H-HhhhcCC-ceEEeecCCCCCCCCCCC----CCCCHHHH----------HHHHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGE--F-LRHFTPR-FNVYVPDLVFFGESYTTR----ADRTESFQ----------ARCVMR 108 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~--~-~~~l~~~-~~v~~~d~~G~G~s~~~~----~~~~~~~~----------~~~~~~ 108 (322)
+.+|.+|.++|.|... + |+. + +..|.+. +..+.+..|-||...+.. ...+..++ +..+..
T Consensus 90 ~~rp~~IhLagTGDh~-f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~ 167 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG-F-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLH 167 (348)
T ss_pred CCCceEEEecCCCccc-h-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHH
Confidence 4578889999988876 4 543 3 5555555 999999999999886542 12222222 223444
Q ss_pred HHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCC-ccccchhhhcccCCChHHHHHHH
Q 042555 109 LMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFP-VTDIDEAANILVPQTPDKLRDLI 187 (322)
Q Consensus 109 ~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 187 (322)
+++..|..++.+.|.||||.+|...|...|..+..+-++++...... +..+... ...|..+...+.... +.+..
T Consensus 168 Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~v--Ft~Gvls~~i~W~~L~~q~~~~~---~~~~~ 242 (348)
T PF09752_consen 168 WLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVV--FTEGVLSNSINWDALEKQFEDTV---YEEEI 242 (348)
T ss_pred HHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcc--hhhhhhhcCCCHHHHHHHhcccc---hhhhh
Confidence 45555888999999999999999999999987776666654332211 1111111 111111111100000 00000
Q ss_pred HhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHH-HhcccccCCCC--CCCCcEEEEEeCCCCCCChHHHHHHHH
Q 042555 188 RFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIET-ILKDRKFCNLP--KIAQQTLIIWGEQDQIFPLELGHRLKR 264 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~--~i~~Pvl~i~g~~D~~~~~~~~~~~~~ 264 (322)
..... ........... ...........+.. +........++ .-.-.+.++.+++|.++|...+..+.+
T Consensus 243 ~~~~~-----~~~~~~~~~~~----~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~ 313 (348)
T PF09752_consen 243 SDIPA-----QNKSLPLDSME----ERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQE 313 (348)
T ss_pred ccccc-----Ccccccchhhc----cccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHH
Confidence 00000 00000000000 00000111111111 11111111111 112248899999999999999999999
Q ss_pred HhcCCcEEEEEcCCCccc-cccChHHHHHHHHHHHh
Q 042555 265 HIGESARLVIIENTGHAV-NLEKPKELLKHLKSFLI 299 (322)
Q Consensus 265 ~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~ 299 (322)
.. |++++..+++ ||.. ++-+.+.+.+.|.+-++
T Consensus 314 ~W-PGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 314 IW-PGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred hC-CCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 99 9999999987 9975 45667888888887664
No 115
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.48 E-value=2.2e-11 Score=88.94 Aligned_cols=255 Identities=14% Similarity=0.167 Sum_probs=150.1
Q ss_pred EEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC----ceEEeecCCCCCCCC---C------CCCCCCHHHHH
Q 042555 37 MQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPR----FNVYVPDLVFFGESY---T------TRADRTESFQA 103 (322)
Q Consensus 37 l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~----~~v~~~d~~G~G~s~---~------~~~~~~~~~~~ 103 (322)
+.++... ....++.+++++|.+|...+ |..++..|.++ ..++.+...||-.-+ . ..+.+++++++
T Consensus 18 ~~~~v~~-~~~~~~li~~IpGNPG~~gF-Y~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV 95 (301)
T KOG3975|consen 18 LKPWVTK-SGEDKPLIVWIPGNPGLLGF-YTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQV 95 (301)
T ss_pred eeeeecc-CCCCceEEEEecCCCCchhH-HHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHH
Confidence 4444432 23567889999999999975 98888877654 558888888886543 1 13567889999
Q ss_pred HHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhcc--cccceeeeeccCCCCCccc-----cccCCCCccccchhh-h
Q 042555 104 RCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFP--KVLEKVVLCCSGVCLEEND-----MEEGLFPVTDIDEAA-N 173 (322)
Q Consensus 104 ~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~ 173 (322)
+.-.++++.. ...+++++|||.|+++.+....... -.|.+++++-|..-....+ +.............. .
T Consensus 96 ~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~y 175 (301)
T KOG3975|consen 96 DHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSY 175 (301)
T ss_pred HHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeee
Confidence 9999999887 3478999999999999999887432 2577888876644222110 011111111111111 1
Q ss_pred cccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhH----HHHHHHHhcccccCCCCCCCCcEEEEEeC
Q 042555 174 ILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEK----RELIETILKDRKFCNLPKIAQQTLIIWGE 249 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 249 (322)
.+....+..++.++..... .....+.++....+........+.. ..-+..... .....+++-.+-+.+.+|.
T Consensus 176 i~~~~lp~~ir~~Li~~~l---~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~-~d~e~~een~d~l~Fyygt 251 (301)
T KOG3975|consen 176 IYWILLPGFIRFILIKFML---CGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTT-RDIEYCEENLDSLWFYYGT 251 (301)
T ss_pred eeeecChHHHHHHHHHHhc---ccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHH-hHHHHHHhcCcEEEEEccC
Confidence 1222334444444443332 1112233333222111111100000 000000000 0222233435568899999
Q ss_pred CCCCCChHHHHHHHHHhcCCcEEEEE-cCCCccccccChHHHHHHHHHHH
Q 042555 250 QDQIFPLELGHRLKRHIGESARLVII-ENTGHAVNLEKPKELLKHLKSFL 298 (322)
Q Consensus 250 ~D~~~~~~~~~~~~~~~~~~~~~~~~-~~~gH~~~~~~~~~~~~~i~~fl 298 (322)
.|.++|.+..+.+.+.+ +..++..- ++..|.+...+.+..+..+.+.+
T Consensus 252 ~DgW~p~~~~d~~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 252 NDGWVPSHYYDYYKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CCCCcchHHHHHHhhhc-chhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 99999999999999999 55443332 67999999999988888887765
No 116
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.42 E-value=1.2e-10 Score=92.21 Aligned_cols=241 Identities=15% Similarity=0.131 Sum_probs=132.4
Q ss_pred EEEEeC--CceEEEEEecCCC-C-CCCCeEEEEcCCCCchh----hcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCC
Q 042555 27 TSTDLG--DGTVMQCWVPKFP-K-ILKPNLLLLHGFGANAM----WQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRAD 96 (322)
Q Consensus 27 ~~i~~~--~g~~l~~~~~~~~-~-~~~~~vv~~hG~~~~~~----~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~ 96 (322)
..|... ++..++.+..... . ...|.|||+||+|.... ..|..+...++.. ..|+++|||=--+. ...
T Consensus 64 ~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh---~~P 140 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH---PFP 140 (336)
T ss_pred eeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC---CCC
Confidence 444443 4455555544322 2 46789999999763221 2578888888666 88999999832222 333
Q ss_pred CCHHHHHHHHHHHHHH------hccccEEEEEEchhHHHHHHHHHhc------ccccceeeeeccCCCCCccccccCCCC
Q 042555 97 RTESFQARCVMRLMEV------FCVKRMSLVGISYGGFVGYSLAAQF------PKVLEKVVLCCSGVCLEENDMEEGLFP 164 (322)
Q Consensus 97 ~~~~~~~~~~~~~l~~------l~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (322)
..+++..+.+..+.+. .+.++++|+|-|.||.+|..+|.+. +-++++.|++.|.............
T Consensus 141 a~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~-- 218 (336)
T KOG1515|consen 141 AAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQ-- 218 (336)
T ss_pred ccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHH--
Confidence 4555555555555553 2567899999999999999888763 3579999999987755433200000
Q ss_pred ccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCC-cE
Q 042555 165 VTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQ-QT 243 (322)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~-Pv 243 (322)
.................+..... .............. .. ..........+ |+
T Consensus 219 -----~~~~~~~~~~~~~~~~~w~~~lP--~~~~~~~~p~~np~-------------------~~-~~~~d~~~~~lp~t 271 (336)
T KOG1515|consen 219 -----QNLNGSPELARPKIDKWWRLLLP--NGKTDLDHPFINPV-------------------GN-SLAKDLSGLGLPPT 271 (336)
T ss_pred -----HhhcCCcchhHHHHHHHHHHhCC--CCCCCcCCcccccc-------------------cc-ccccCccccCCCce
Confidence 00000000111112222221111 00000000000000 00 01112233344 59
Q ss_pred EEEEeCCCCCCChHHHHHHHHHh---cCCcEEEEEcCCCccccccCh-----HHHHHHHHHHHhcc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHI---GESARLVIIENTGHAVNLEKP-----KELLKHLKSFLIVD 301 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~~~~-----~~~~~~i~~fl~~~ 301 (322)
+++.++.|.+.. ....+++++ +-.+++..++++.|.+++-.+ .++.+.+.+|+.+.
T Consensus 272 lv~~ag~D~L~D--~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 272 LVVVAGYDVLRD--EGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEEEeCchhhhh--hhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999998874 333333333 245677789999998876444 46778888888653
No 117
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.42 E-value=7e-12 Score=95.54 Aligned_cols=203 Identities=19% Similarity=0.265 Sum_probs=119.0
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhc-CC---ce--EEeecCCCC----CCC----CCC-------CCC-CCHHHHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFT-PR---FN--VYVPDLVFF----GES----YTT-------RAD-RTESFQAR 104 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~---~~--v~~~d~~G~----G~s----~~~-------~~~-~~~~~~~~ 104 (322)
....|.||+||++++.. .+..++..+. +. -. ++.++.-|+ |.= ..| ... .+....++
T Consensus 9 ~~~tPTifihG~~gt~~-s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTAN-SFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -S-EEEEEE--TTGGCC-CCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cCCCcEEEECCCCCChh-HHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 34568999999999985 7999999996 43 23 333444442 221 111 112 36777888
Q ss_pred HHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhccc-----ccceeeeeccCCCCCccccccCCCCccccchhhhcc
Q 042555 105 CVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK-----VLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANIL 175 (322)
Q Consensus 105 ~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (322)
.+..++..| +.+++.+|||||||..++.++..+.. ++.++|.+++++.......... . ..
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~-----~---~~--- 156 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ-----N---QN--- 156 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T-----T---TT---
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc-----h---hh---
Confidence 888888777 67899999999999999999988522 5899999998775442210000 0 00
Q ss_pred cCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeC------
Q 042555 176 VPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGE------ 249 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~------ 249 (322)
... . .. |.. ....+..+... ....++ -.+.||-|.|.
T Consensus 157 --------------~~~---~-~g-p~~----------------~~~~y~~l~~~-~~~~~p-~~i~VLnI~G~~~~g~~ 199 (255)
T PF06028_consen 157 --------------DLN---K-NG-PKS----------------MTPMYQDLLKN-RRKNFP-KNIQVLNIYGDLEDGSN 199 (255)
T ss_dssp ---------------CS---T-T--BSS------------------HHHHHHHHT-HGGGST-TT-EEEEEEEESBTTCS
T ss_pred --------------hhc---c-cC-Ccc----------------cCHHHHHHHHH-HHhhCC-CCeEEEEEecccCCCCC
Confidence 000 0 00 000 00011111110 011222 26679999998
Q ss_pred CCCCCChHHHHHHHHHhc---CCcEEEEEcC--CCccccccChHHHHHHHHHHHh
Q 042555 250 QDQIFPLELGHRLKRHIG---ESARLVIIEN--TGHAVNLEKPKELLKHLKSFLI 299 (322)
Q Consensus 250 ~D~~~~~~~~~~~~~~~~---~~~~~~~~~~--~gH~~~~~~~~~~~~~i~~fl~ 299 (322)
.|..||...+..+...+. ...+-.++.| +.|.-..|++ ++.+.|.+||=
T Consensus 200 sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 200 SDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp BTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 789999998888877773 2345566655 6898888876 57799999984
No 118
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.41 E-value=8.9e-12 Score=91.96 Aligned_cols=104 Identities=21% Similarity=0.307 Sum_probs=74.3
Q ss_pred CCCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh------
Q 042555 45 PKILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQAR----CVMRLMEVF------ 113 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~----~~~~~l~~l------ 113 (322)
..+.-|+|+|+||+....++ |..++.+++.+ |-|+++++-.. . .+ .....-+.+. ++..-+.++
T Consensus 42 ~~G~yPVilF~HG~~l~ns~-Ys~lL~HIASHGfIVVAPQl~~~--~-~p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~ 116 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYNSF-YSQLLAHIASHGFIVVAPQLYTL--F-PP-DGQDEIKSAASVINWLPEGLQHVLPENVE 116 (307)
T ss_pred cCCCccEEEEeechhhhhHH-HHHHHHHHhhcCeEEEechhhcc--c-CC-CchHHHHHHHHHHHHHHhhhhhhCCCCcc
Confidence 45778999999999988865 99999999999 99999998642 1 12 1111112222 222223322
Q ss_pred -ccccEEEEEEchhHHHHHHHHHhcc--cccceeeeeccCCCC
Q 042555 114 -CVKRMSLVGISYGGFVGYSLAAQFP--KVLEKVVLCCSGVCL 153 (322)
Q Consensus 114 -~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~ 153 (322)
+..++.++|||.||-.|..+|..+. -.+.++|.++|....
T Consensus 117 ~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 117 ANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred cccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 3478999999999999999998773 258888888886543
No 119
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=5.3e-11 Score=105.04 Aligned_cols=230 Identities=17% Similarity=0.160 Sum_probs=147.9
Q ss_pred cCCCceEEEEEeCCceEEEEEecCCC----CCCCCeEEEEcCCCCchh------hcHHHHHhhhcCC-ceEEeecCCCCC
Q 042555 20 SNAGLRSTSTDLGDGTVMQCWVPKFP----KILKPNLLLLHGFGANAM------WQYGEFLRHFTPR-FNVYVPDLVFFG 88 (322)
Q Consensus 20 ~~~~~~~~~i~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~~~------~~~~~~~~~l~~~-~~v~~~d~~G~G 88 (322)
.....+...+.. +|....+....|. .++-|.+|.+||.+++.. ..|... ..... +.|+.+|.||.|
T Consensus 494 ~~p~~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 494 ALPIVEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred cCCcceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC
Confidence 344556667777 8888888776542 235578888899987331 133333 23333 999999999987
Q ss_pred CCCCC--------CCCCCHHHHHHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhccccc-ceeeeeccCCCCCccc
Q 042555 89 ESYTT--------RADRTESFQARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFPKVL-EKVVLCCSGVCLEEND 157 (322)
Q Consensus 89 ~s~~~--------~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v-~~lil~~~~~~~~~~~ 157 (322)
..... -.....+++...+..+++.. +.+++.|+|+|+||.+++.++...|+.+ +..+.++|.....-..
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yd 650 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYD 650 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeec
Confidence 76533 22345566666666666544 5578999999999999999999998554 5548988876543111
Q ss_pred cccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCC
Q 042555 158 MEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLP 237 (322)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (322)
... ..+. +. .+......+ ........+.
T Consensus 651 ---s~~-------------------tery----mg-------~p~~~~~~y-------------------~e~~~~~~~~ 678 (755)
T KOG2100|consen 651 ---STY-------------------TERY----MG-------LPSENDKGY-------------------EESSVSSPAN 678 (755)
T ss_pred ---ccc-------------------cHhh----cC-------CCccccchh-------------------hhccccchhh
Confidence 000 0000 00 000000000 0001223344
Q ss_pred CCCCcE-EEEEeCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCccccccCh-HHHHHHHHHHHhccCCC
Q 042555 238 KIAQQT-LIIWGEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNLEKP-KELLKHLKSFLIVDSSL 304 (322)
Q Consensus 238 ~i~~Pv-l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~~~~~ 304 (322)
.++.|. |++||+.|..++.+....+.+.+. -..+..++|+.+|.+..... ..+...+..|+..+...
T Consensus 679 ~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 679 NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCc
Confidence 555565 999999999999998888888773 23789999999999876543 56788899999865543
No 120
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.38 E-value=2.4e-11 Score=92.21 Aligned_cols=94 Identities=21% Similarity=0.200 Sum_probs=61.2
Q ss_pred EEEEcCCCC---chhhcHHHHHhhhcC-C-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---------hcccc
Q 042555 52 LLLLHGFGA---NAMWQYGEFLRHFTP-R-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV---------FCVKR 117 (322)
Q Consensus 52 vv~~hG~~~---~~~~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---------l~~~~ 117 (322)
||++||.+- +.+ ....+...+++ . +.|+.+|+|=. +...+.+..+|+.+.++. .+.++
T Consensus 1 v~~~HGGg~~~g~~~-~~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKE-SHWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTT-THHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChH-HHHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccc
Confidence 799999764 333 34556666665 3 99999999932 223334445555444433 24578
Q ss_pred EEEEEEchhHHHHHHHHHhccc----ccceeeeeccCCCC
Q 042555 118 MSLVGISYGGFVGYSLAAQFPK----VLEKVVLCCSGVCL 153 (322)
Q Consensus 118 ~~lvGhS~Gg~~a~~~a~~~p~----~v~~lil~~~~~~~ 153 (322)
++++|+|.||.+++.++....+ .++++++++|....
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999999986543 38999999996544
No 121
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.38 E-value=2.6e-11 Score=87.43 Aligned_cols=170 Identities=15% Similarity=0.244 Sum_probs=116.7
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC----------CCCCHHHHHHHHHHHHHHh---c-
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR----------ADRTESFQARCVMRLMEVF---C- 114 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~~~l~~l---~- 114 (322)
..||.+--+.|.....-+..++.++.+ |.|+.+|+-+ |....+. ...+....-.++..+++.+ +
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~-Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFR-GDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhc-CCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 467777665554422367788888888 9999999742 3211111 1122223345555555555 4
Q ss_pred cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCC
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNS 194 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (322)
.++|.++|.||||.++..+....| .+.+++.+-|....
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d----------------------------------------- 156 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD----------------------------------------- 156 (242)
T ss_pred cceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC-----------------------------------------
Confidence 578999999999999999999888 57777776553311
Q ss_pred CCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCC----c
Q 042555 195 KPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGES----A 270 (322)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~----~ 270 (322)
......+++|++++.|+.|.++|+.....+.+.+..+ .
T Consensus 157 --------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~ 198 (242)
T KOG3043|consen 157 --------------------------------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGS 198 (242)
T ss_pred --------------------------------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccce
Confidence 1123467899999999999999999999888888422 3
Q ss_pred EEEEEcCCCccccc-----cCh------HHHHHHHHHHHhc
Q 042555 271 RLVIIENTGHAVNL-----EKP------KELLKHLKSFLIV 300 (322)
Q Consensus 271 ~~~~~~~~gH~~~~-----~~~------~~~~~~i~~fl~~ 300 (322)
++.+++|.+|.++. +.| ++..+.+.+|++.
T Consensus 199 ~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 199 QVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred eEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 69999999998773 233 4556667777764
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.38 E-value=6.1e-11 Score=88.36 Aligned_cols=104 Identities=22% Similarity=0.333 Sum_probs=66.8
Q ss_pred CCCeEEEEcCCCCchhhcHHHH--HhhhcCC--ceEEeecCCCCCCCCC--C-------CCCCCHHHHHHHHHHHHHHh-
Q 042555 48 LKPNLLLLHGFGANAMWQYGEF--LRHFTPR--FNVYVPDLVFFGESYT--T-------RADRTESFQARCVMRLMEVF- 113 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~--~~~l~~~--~~v~~~d~~G~G~s~~--~-------~~~~~~~~~~~~~~~~l~~l- 113 (322)
+.|.||++||.+++.+ .+... +..|++. |-|+.++......... . ........++.-+..+....
T Consensus 15 ~~PLVv~LHG~~~~a~-~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~ 93 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAE-DFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYN 93 (220)
T ss_pred CCCEEEEeCCCCCCHH-HHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcc
Confidence 4689999999999986 35442 2345555 7888888542111110 0 00111111222233333333
Q ss_pred -ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 114 -CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 114 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
+.++|++.|+|.||.++..++..+|+.+.++..+++...
T Consensus 94 iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 94 IDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred cCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 457899999999999999999999999999988877553
No 123
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.36 E-value=1.2e-10 Score=97.52 Aligned_cols=129 Identities=19% Similarity=0.141 Sum_probs=90.6
Q ss_pred eEEEEEeCC---ceEEEEEecCC--CCCCCCeEEEEcCCCCchhhcHHHHHh------------------hhcCCceEEe
Q 042555 25 RSTSTDLGD---GTVMQCWVPKF--PKILKPNLLLLHGFGANAMWQYGEFLR------------------HFTPRFNVYV 81 (322)
Q Consensus 25 ~~~~i~~~~---g~~l~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~~------------------~l~~~~~v~~ 81 (322)
...++.+.+ +..+.|+..++ .+.+.|+||+++|.+|++. .+..+.+ .+.+...++.
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~ 126 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS-MFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIY 126 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHH-HHhhhccCCCeEEeCCCCceeECCcccccccCeEE
Confidence 345677743 57788877643 3456799999999999885 3433221 1223378999
Q ss_pred ecCC-CCCCCCCCC--CCCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHhc----------cccc
Q 042555 82 PDLV-FFGESYTTR--ADRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQF----------PKVL 141 (322)
Q Consensus 82 ~d~~-G~G~s~~~~--~~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v 141 (322)
+|.| |+|.|.... ...+.++.++|+.++++.+ ...+++|+|||+||.++..+|.+. .-.+
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 9975 888886542 2345678889998888753 457899999999999988887763 1247
Q ss_pred ceeeeeccCCCCC
Q 042555 142 EKVVLCCSGVCLE 154 (322)
Q Consensus 142 ~~lil~~~~~~~~ 154 (322)
+++++.++.....
T Consensus 207 kGi~IGNg~~dp~ 219 (462)
T PTZ00472 207 AGLAVGNGLTDPY 219 (462)
T ss_pred EEEEEeccccChh
Confidence 8888888876554
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.34 E-value=1.6e-11 Score=92.49 Aligned_cols=162 Identities=22% Similarity=0.248 Sum_probs=86.1
Q ss_pred CCCeEEEEcCCCCchhhcHHH----HHhhhcC-CceEEeecCCC-----CCCC------------CCC------C-----
Q 042555 48 LKPNLLLLHGFGANAMWQYGE----FLRHFTP-RFNVYVPDLVF-----FGES------------YTT------R----- 94 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~----~~~~l~~-~~~v~~~d~~G-----~G~s------------~~~------~----- 94 (322)
+++.||++||++.+.+. ++. +...|.+ .+..+.+|-|- -|-. ..+ .
T Consensus 3 ~k~riLcLHG~~~na~i-f~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEI-FRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT--HHH-HHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcCHHH-HHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 56789999999999974 654 5556666 57777777542 1111 000 0
Q ss_pred CCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcc--------cccceeeeeccCCCCCccccccCCCCcc
Q 042555 95 ADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP--------KVLEKVVLCCSGVCLEENDMEEGLFPVT 166 (322)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p--------~~v~~lil~~~~~~~~~~~~~~~~~~~~ 166 (322)
....+++..+.+.+.++..+. =..|+|+|.||.+|..++.... ..++-+|++++.......
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp GG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred cccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 123345556666666666542 3479999999999998886431 247888888775432110
Q ss_pred ccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEE
Q 042555 167 DIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLII 246 (322)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i 246 (322)
. . ....-..|++|+|.|
T Consensus 151 -------------------------~-------------~-------------------------~~~~~~~i~iPtlHv 167 (212)
T PF03959_consen 151 -------------------------Y-------------Q-------------------------ELYDEPKISIPTLHV 167 (212)
T ss_dssp -------------------------G-------------T-------------------------TTT--TT---EEEEE
T ss_pred -------------------------h-------------h-------------------------hhhccccCCCCeEEE
Confidence 0 0 000234679999999
Q ss_pred EeCCCCCCChHHHHHHHHHhcCC-cEEEEEcCCCccccccC
Q 042555 247 WGEQDQIFPLELGHRLKRHIGES-ARLVIIENTGHAVNLEK 286 (322)
Q Consensus 247 ~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~ 286 (322)
+|++|.+++++..+.+.+.+ .+ .+++..+ +||.+....
T Consensus 168 ~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~-gGH~vP~~~ 206 (212)
T PF03959_consen 168 IGENDPVVPPERSEALAEMF-DPDARVIEHD-GGHHVPRKK 206 (212)
T ss_dssp EETT-SSS-HHHHHHHHHHH-HHHEEEEEES-SSSS----H
T ss_pred EeCCCCCcchHHHHHHHHhc-cCCcEEEEEC-CCCcCcCCh
Confidence 99999999999999999999 55 6777776 589876643
No 125
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.34 E-value=1.5e-10 Score=88.09 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=86.2
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-cccEEEEEEchhHH
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC-VKRMSLVGISYGGF 128 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~lvGhS~Gg~ 128 (322)
|+|.++|+.+|... .|..+...|.....|+..+.||+|.-. ....+++++++...+.|.... -.+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~-~~~~L~~~l~~~~~v~~l~a~g~~~~~--~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVL-AYAPLAAALGPLLPVYGLQAPGYGAGE--QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHH-HHHHHHHHhccCceeeccccCcccccc--cccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 58999999999984 699999999998999999999998632 346789999998888888774 46999999999999
Q ss_pred HHHHHHHhc---ccccceeeeeccCCC
Q 042555 129 VGYSLAAQF---PKVLEKVVLCCSGVC 152 (322)
Q Consensus 129 ~a~~~a~~~---p~~v~~lil~~~~~~ 152 (322)
+|...|.+- .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999874 457999999998876
No 126
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.34 E-value=5.3e-12 Score=94.86 Aligned_cols=147 Identities=18% Similarity=0.236 Sum_probs=69.4
Q ss_pred HHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCC--CccccchhhhcccC
Q 042555 103 ARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLF--PVTDIDEAANILVP 177 (322)
Q Consensus 103 ~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 177 (322)
.+...+++... ..++|.|+|.|.||.+|+.+|..+| .|+++|.++|+............. ....+........
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~- 83 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS- 83 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E-
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce-
Confidence 44444555544 2368999999999999999999999 699999999876554322111100 0000000000000
Q ss_pred CChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChH
Q 042555 178 QTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLE 257 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~ 257 (322)
.. .+....... .......-......-.+.++++|+|+|.|++|.++|..
T Consensus 84 -------------~~-------~~~~~~~~~-----------~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~ 132 (213)
T PF08840_consen 84 -------------WN-------EPGLLRSRY-----------AFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSS 132 (213)
T ss_dssp -------------E--------TTS-EE-TT------------B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HH
T ss_pred -------------ec-------CCcceehhh-----------hhhcccccccccccccHHHcCCCEEEEEeCCCCccchH
Confidence 00 000000000 00000000000123346788999999999999999876
Q ss_pred HH-HHHHHHhc----C-CcEEEEEcCCCccc
Q 042555 258 LG-HRLKRHIG----E-SARLVIIENTGHAV 282 (322)
Q Consensus 258 ~~-~~~~~~~~----~-~~~~~~~~~~gH~~ 282 (322)
.. +.+.+++. + +.+.+.++++||.+
T Consensus 133 ~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 133 EMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp HHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred HHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 44 34444442 2 46889999999985
No 127
>PRK04940 hypothetical protein; Provisional
Probab=99.31 E-value=1e-09 Score=78.17 Aligned_cols=170 Identities=16% Similarity=0.244 Sum_probs=97.5
Q ss_pred EEEEcCCCCchhhc-HH-HHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----cccEEEEEEch
Q 042555 52 LLLLHGFGANAMWQ-YG-EFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC----VKRMSLVGISY 125 (322)
Q Consensus 52 vv~~hG~~~~~~~~-~~-~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~lvGhS~ 125 (322)
||++||+.+++... .. .....+....+++ +++ ........+.+.+.+..+. .+++.|||+|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 79999999988521 21 1122221223333 221 1334444445555554321 15799999999
Q ss_pred hHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhH
Q 042555 126 GGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFL 205 (322)
Q Consensus 126 Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (322)
||+.|..+|.++. + ..|+++|...+... +...+ . .+.. .. .+.
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P~~~--------------------------L~~~i----g--~~~~-y~-~~~ 112 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFPEEN--------------------------MEGKI----D--RPEE-YA-DIA 112 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCChHHH--------------------------HHHHh----C--CCcc-hh-hhh
Confidence 9999999999986 3 56788987754211 11111 1 0000 00 111
Q ss_pred HhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCc-EEEEEcCCCccccc
Q 042555 206 TDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESA-RLVIIENTGHAVNL 284 (322)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 284 (322)
...++.+. .+-.-..+++..+.|.+.+...+.+.. .++ +..+.+|++|-+
T Consensus 113 ~~h~~eL~-----------------------~~~p~r~~vllq~gDEvLDyr~a~~~y----~~~y~~~v~~GGdH~f-- 163 (180)
T PRK04940 113 TKCVTNFR-----------------------EKNRDRCLVILSRNDEVLDSQRTAEEL----HPYYEIVWDEEQTHKF-- 163 (180)
T ss_pred HHHHHHhh-----------------------hcCcccEEEEEeCCCcccCHHHHHHHh----ccCceEEEECCCCCCC--
Confidence 11111110 011234689999999999877665443 344 788899988876
Q ss_pred cChHHHHHHHHHHHh
Q 042555 285 EKPKELLKHLKSFLI 299 (322)
Q Consensus 285 ~~~~~~~~~i~~fl~ 299 (322)
++-++....|.+|+.
T Consensus 164 ~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 164 KNISPHLQRIKAFKT 178 (180)
T ss_pred CCHHHHHHHHHHHHh
Confidence 455667888899984
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.31 E-value=3.8e-11 Score=90.77 Aligned_cols=103 Identities=18% Similarity=0.225 Sum_probs=71.3
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhc--------C-CceEEeecCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh-
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFT--------P-RFNVYVPDLVFFGESYTTRADRTESFQAR----CVMRLMEVF- 113 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~--------~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~----~~~~~l~~l- 113 (322)
++.+|||+||.+++.. +++.+...+. . .++++++|+......- ....+.+.++ .+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~-q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~---~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK-QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF---HGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHh-HHHHHHHHHhhhhhhccCccceeEEEeccCcccccc---ccccHHHHHHHHHHHHHHHHHhhh
Confidence 5779999999999886 5777765552 1 2789999987543221 1223333333 344444444
Q ss_pred ----ccccEEEEEEchhHHHHHHHHHhcc---cccceeeeeccCCCCC
Q 042555 114 ----CVKRMSLVGISYGGFVGYSLAAQFP---KVLEKVVLCCSGVCLE 154 (322)
Q Consensus 114 ----~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lil~~~~~~~~ 154 (322)
+.+++++|||||||.+|..++...+ +.|+.+|.++++....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 4578999999999999998887643 4799999999876544
No 129
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.30 E-value=2.1e-09 Score=86.59 Aligned_cols=105 Identities=19% Similarity=0.125 Sum_probs=68.0
Q ss_pred CCCCCeEEEEcCCCC---chhhcHHHHHhhhcC-C-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hc--c
Q 042555 46 KILKPNLLLLHGFGA---NAMWQYGEFLRHFTP-R-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV---FC--V 115 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~---~~~~~~~~~~~~l~~-~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~---l~--~ 115 (322)
..+.|+||++||.+- +.+ ....+...+.. . +.|+.+|||-.-+- .....+++..+.+..+.++ ++ .
T Consensus 76 ~~~~p~vly~HGGg~~~g~~~-~~~~~~~~~~~~~g~~vv~vdYrlaPe~---~~p~~~~d~~~a~~~l~~~~~~~g~dp 151 (312)
T COG0657 76 AATAPVVLYLHGGGWVLGSLR-THDALVARLAAAAGAVVVSVDYRLAPEH---PFPAALEDAYAAYRWLRANAAELGIDP 151 (312)
T ss_pred CCCCcEEEEEeCCeeeecChh-hhHHHHHHHHHHcCCEEEecCCCCCCCC---CCCchHHHHHHHHHHHHhhhHhhCCCc
Confidence 345799999999763 332 34344444433 3 99999999843222 2223344433333333333 22 5
Q ss_pred ccEEEEEEchhHHHHHHHHHhccc----ccceeeeeccCCCCC
Q 042555 116 KRMSLVGISYGGFVGYSLAAQFPK----VLEKVVLCCSGVCLE 154 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lil~~~~~~~~ 154 (322)
++|.++|+|.||.+++.++..-.+ ...+.+++.|.....
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 789999999999999999887543 478889998877655
No 130
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.25 E-value=3e-10 Score=80.66 Aligned_cols=199 Identities=11% Similarity=0.043 Sum_probs=120.1
Q ss_pred EEEecCCCCCCCCeEEEEcCCC---CchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHH---
Q 042555 38 QCWVPKFPKILKPNLLLLHGFG---ANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLME--- 111 (322)
Q Consensus 38 ~~~~~~~~~~~~~~vv~~hG~~---~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~--- 111 (322)
.+..+++ ....+..||+||.- ++........-..+...|+|..+++ +.+. ...+++....++...++
T Consensus 57 ~VDIwg~-~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~---q~htL~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 57 LVDIWGS-TNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCP---QVHTLEQTMTQFTHGVNFIL 129 (270)
T ss_pred EEEEecC-CCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCc---ccccHHHHHHHHHHHHHHHH
Confidence 3344432 45677999999952 2222223333444545599888865 4442 33455555555444443
Q ss_pred -Hh-ccccEEEEEEchhHHHHHHHHHhc-ccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHH
Q 042555 112 -VF-CVKRMSLVGISYGGFVGYSLAAQF-PKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIR 188 (322)
Q Consensus 112 -~l-~~~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (322)
.. ..+.+.+-|||.|+.+|+.+..+. ..+|.++++.++....... ..
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL------------------------------~~ 179 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLREL------------------------------SN 179 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHH------------------------------hC
Confidence 33 345678899999999999887663 4589999999886643211 11
Q ss_pred hhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcC
Q 042555 189 FSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGE 268 (322)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 268 (322)
.... .. ........+.. ......+..++.|++++.|++|.---.++.+.+...+ .
T Consensus 180 te~g--~d-lgLt~~~ae~~---------------------Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~ 234 (270)
T KOG4627|consen 180 TESG--ND-LGLTERNAESV---------------------SCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-R 234 (270)
T ss_pred Cccc--cc-cCcccchhhhc---------------------CccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-h
Confidence 1110 00 00000000000 0022335678899999999999766678888899888 7
Q ss_pred CcEEEEEcCCCccccccCh----HHHHHHHHHHH
Q 042555 269 SARLVIIENTGHAVNLEKP----KELLKHLKSFL 298 (322)
Q Consensus 269 ~~~~~~~~~~gH~~~~~~~----~~~~~~i~~fl 298 (322)
.+++..+++.+|+-.+++. ..+...+.+|+
T Consensus 235 ~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 235 KASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred hcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 8999999999999877642 33445555554
No 131
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.24 E-value=1e-09 Score=79.34 Aligned_cols=174 Identities=18% Similarity=0.203 Sum_probs=108.4
Q ss_pred CCCCeEEEEcCCCCchhhcHHH----HHhhhcCCceEEeecCCC------CCCCCC-------C----------------
Q 042555 47 ILKPNLLLLHGFGANAMWQYGE----FLRHFTPRFNVYVPDLVF------FGESYT-------T---------------- 93 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~G------~G~s~~-------~---------------- 93 (322)
..++-|||+||+-.+.+. |.. +...|.+.+..+.+|-|- .-.+.. +
T Consensus 3 ~~k~rvLcLHGfrQsg~~-F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKV-FSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCCceEEEecchhhccHH-HHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 356789999999988863 543 334444446667766661 111100 0
Q ss_pred -CCCCCHHHHHHHHHHHHHHhccccE-EEEEEchhHHHHHHHHHhccc--------ccceeeeeccCCCCCccccccCCC
Q 042555 94 -RADRTESFQARCVMRLMEVFCVKRM-SLVGISYGGFVGYSLAAQFPK--------VLEKVVLCCSGVCLEENDMEEGLF 163 (322)
Q Consensus 94 -~~~~~~~~~~~~~~~~l~~l~~~~~-~lvGhS~Gg~~a~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~ 163 (322)
......+...+.+.+.+.+.| |+ .|+|+|.|+.++..++..... .++-+|++++.......
T Consensus 82 ~~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~------- 152 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK------- 152 (230)
T ss_pred cccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch-------
Confidence 011233444555566666553 44 699999999999998872110 25666666654321100
Q ss_pred CccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcE
Q 042555 164 PVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQT 243 (322)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv 243 (322)
. . .......+++|.
T Consensus 153 ----------------------------------------~-~-------------------------~~~~~~~i~~PS 166 (230)
T KOG2551|consen 153 ----------------------------------------L-D-------------------------ESAYKRPLSTPS 166 (230)
T ss_pred ----------------------------------------h-h-------------------------hhhhccCCCCCe
Confidence 0 0 011234789999
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
|.|.|+.|.++|...+..+++.+ ++..++.-+ +||++.-.+ ...+.|.+|+.+
T Consensus 167 LHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 167 LHIFGETDTIVPSERSEQLAESF-KDATVLEHP-GGHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred eEEecccceeecchHHHHHHHhc-CCCeEEecC-CCccCCCch--HHHHHHHHHHHH
Confidence 99999999999999999999999 788655555 599987665 344555555543
No 132
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.23 E-value=9.2e-10 Score=83.57 Aligned_cols=95 Identities=18% Similarity=0.130 Sum_probs=71.1
Q ss_pred EEcCCC--CchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hccccEEEEEEchhHHHH
Q 042555 54 LLHGFG--ANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV-FCVKRMSLVGISYGGFVG 130 (322)
Q Consensus 54 ~~hG~~--~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~lvGhS~Gg~~a 130 (322)
++|+.+ ++. ..|..+...|...+.++++|.+|++.+... ..+.+.+++.+...+.. ....+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGP-HEYARLAAALRGRRDVSALPLPGFGPGEPL--PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcH-HHHHHHHHhcCCCccEEEecCCCCCCCCCC--CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445533 454 369999999988899999999999876543 34667777666555443 345789999999999999
Q ss_pred HHHHHhc---ccccceeeeeccCC
Q 042555 131 YSLAAQF---PKVLEKVVLCCSGV 151 (322)
Q Consensus 131 ~~~a~~~---p~~v~~lil~~~~~ 151 (322)
...+.+. +..+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 9888863 45689998887644
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.20 E-value=4.3e-10 Score=91.72 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=59.0
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCC-C-C--C------C--------------CCC---C
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGES-Y-T--T------R--------------ADR---T 98 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s-~-~--~------~--------------~~~---~ 98 (322)
++-|+|||-||++++.. .|..++..|+.+ |-|+++|.|..-.+ . . . . ... .
T Consensus 98 ~~~PvvIFSHGlgg~R~-~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT-SYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TT-TTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchh-hHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 56789999999999996 699999999998 99999999943111 0 0 0 0 000 0
Q ss_pred -HH-------HHHHHHHHHHHHh--------------------------ccccEEEEEEchhHHHHHHHHHhccccccee
Q 042555 99 -ES-------FQARCVMRLMEVF--------------------------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKV 144 (322)
Q Consensus 99 -~~-------~~~~~~~~~l~~l--------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 144 (322)
.+ .-++++..+++.+ +.+++.++|||+||..++..+.+. .++++.
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 00 1123343343322 235799999999999999988876 579999
Q ss_pred eeeccCC
Q 042555 145 VLCCSGV 151 (322)
Q Consensus 145 il~~~~~ 151 (322)
|++++..
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999864
No 134
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.20 E-value=1e-08 Score=83.61 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=73.6
Q ss_pred CCCCeEEEE-----cC--CCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----c
Q 042555 47 ILKPNLLLL-----HG--FGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF-----C 114 (322)
Q Consensus 47 ~~~~~vv~~-----hG--~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l-----~ 114 (322)
..++|+|++ || .|+-+. =..+...|...+.|+.+.+. ..+.+..++++......+++++. +
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~--dSevG~AL~~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~ 138 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKP--DSEVGVALRAGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPD 138 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCc--ccHHHHHHHcCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 345566666 33 344332 23556667777777776654 23456778888887777777765 2
Q ss_pred cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCc
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEE 155 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~ 155 (322)
..+.+++|-|.||+.++.+|+.+|+.+..+|+-+++.+...
T Consensus 139 ~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 139 APKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred CCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 34889999999999999999999999999999988877654
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.19 E-value=3.5e-10 Score=80.61 Aligned_cols=96 Identities=20% Similarity=0.212 Sum_probs=75.7
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----ccccEEEEEEch
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF----CVKRMSLVGISY 125 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvGhS~ 125 (322)
.+||+-|=+|-... =..+++.|+++ +.|+.+|-+-|=. ...+.++.+.|+.+++++. +.++++|+|+|+
T Consensus 4 ~~v~~SGDgGw~~~-d~~~a~~l~~~G~~VvGvdsl~Yfw-----~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSF 77 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL-DKQIAEALAKQGVPVVGVDSLRYFW-----SERTPEQTAADLARIIRHYRARWGRKRVVLIGYSF 77 (192)
T ss_pred EEEEEeCCCCchhh-hHHHHHHHHHCCCeEEEechHHHHh-----hhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecC
Confidence 57888887776643 46788899888 9999999653322 3567788899999888876 568999999999
Q ss_pred hHHHHHHHHHhccc----ccceeeeeccCCC
Q 042555 126 GGFVGYSLAAQFPK----VLEKVVLCCSGVC 152 (322)
Q Consensus 126 Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 152 (322)
|+-+......+.|. +|..++|+++...
T Consensus 78 GADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 78 GADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 99988888877764 7999999988653
No 136
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.18 E-value=1.3e-09 Score=78.31 Aligned_cols=173 Identities=18% Similarity=0.304 Sum_probs=114.4
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCC------------------CCCCCCCHHHHHHHHHHHH
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESY------------------TTRADRTESFQARCVMRLM 110 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~------------------~~~~~~~~~~~~~~~~~~l 110 (322)
.+||++||.+.+.. .|.+++..|.-. ...+++.-|-.-.+. ...........++.+..++
T Consensus 4 atIi~LHglGDsg~-~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGS-GWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred EEEEEEecCCCCCc-cHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 47999999999995 698888887655 667776544221111 0112233444556666666
Q ss_pred HHh---c--cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHH
Q 042555 111 EVF---C--VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRD 185 (322)
Q Consensus 111 ~~l---~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (322)
+.. + ..++.+-|.|+||.+++..+..+|..+.+++...+........
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~---------------------------- 134 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG---------------------------- 134 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------------------------
Confidence 654 2 3679999999999999999999988888877766543211100
Q ss_pred HHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHH
Q 042555 186 LIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRH 265 (322)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~ 265 (322)
.+. ..... + ..|++..||+.|+++|....+...+.
T Consensus 135 --------------~~~-----------------------------~~~~~-~-~~~i~~~Hg~~d~~vp~~~g~~s~~~ 169 (206)
T KOG2112|consen 135 --------------LPG-----------------------------WLPGV-N-YTPILLCHGTADPLVPFRFGEKSAQF 169 (206)
T ss_pred --------------ccC-----------------------------Ccccc-C-cchhheecccCCceeehHHHHHHHHH
Confidence 000 00000 1 67999999999999998877666665
Q ss_pred hc---CCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 266 IG---ESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 266 ~~---~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
+. ..++++.++|.+|...-+ ++ +.+..|+.+
T Consensus 170 l~~~~~~~~f~~y~g~~h~~~~~---e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 170 LKSLGVRVTFKPYPGLGHSTSPQ---EL-DDLKSWIKT 203 (206)
T ss_pred HHHcCCceeeeecCCccccccHH---HH-HHHHHHHHH
Confidence 52 448899999999986543 33 445566654
No 137
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.14 E-value=2.7e-09 Score=80.47 Aligned_cols=119 Identities=19% Similarity=0.270 Sum_probs=72.4
Q ss_pred CCceEEEEEecCCC----CCCC-CeEEEEcCCCCchhhcHHHHHhhh-------cCC-ceEEeecCCC-CCCCCCCCCCC
Q 042555 32 GDGTVMQCWVPKFP----KILK-PNLLLLHGFGANAMWQYGEFLRHF-------TPR-FNVYVPDLVF-FGESYTTRADR 97 (322)
Q Consensus 32 ~~g~~l~~~~~~~~----~~~~-~~vv~~hG~~~~~~~~~~~~~~~l-------~~~-~~v~~~d~~G-~G~s~~~~~~~ 97 (322)
.-|.++.|..+-|. +++- |.|||+||.|..+......+...+ .+. +-|+++.+-- +-.++. ....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~ 247 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLL 247 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc-ccch
Confidence 45788888887542 2334 899999999877653333332221 111 4455555311 111211 0111
Q ss_pred CHHHHHHHHHHHH-HHh--ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 98 TESFQARCVMRLM-EVF--CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 98 ~~~~~~~~~~~~l-~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
-.....+.+.+++ ++. +-.+|+++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 1222233333222 333 44689999999999999999999999999999998754
No 138
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=3.3e-09 Score=88.11 Aligned_cols=225 Identities=17% Similarity=0.147 Sum_probs=140.5
Q ss_pred EEEEeCCceEEEEEecCCC----CCCCCeEEEEcCCCCchhh--cHH--HH--HhhhcCC-ceEEeecCCCCCCCCCC--
Q 042555 27 TSTDLGDGTVMQCWVPKFP----KILKPNLLLLHGFGANAMW--QYG--EF--LRHFTPR-FNVYVPDLVFFGESYTT-- 93 (322)
Q Consensus 27 ~~i~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~~~~--~~~--~~--~~~l~~~-~~v~~~d~~G~G~s~~~-- 93 (322)
..++...|.++....+.|. +++-|+++++-|.++-.-. .|. .. ...|+.. |.|+.+|-||.-.....
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 3446666777766555442 3457899999998864311 121 11 2345555 99999999986544321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCC
Q 042555 94 ------RADRTESFQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFP 164 (322)
Q Consensus 94 ------~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~ 164 (322)
-....++++++-+.-+.+.. +.++|.+-|+|+||++++....++|+.++..|.-+|......-+ .
T Consensus 696 ~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YD---T--- 769 (867)
T KOG2281|consen 696 SHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYD---T--- 769 (867)
T ss_pred HHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeec---c---
Confidence 24557788888888888876 45899999999999999999999999777777666544322110 0
Q ss_pred ccccchhhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEE
Q 042555 165 VTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTL 244 (322)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 244 (322)
....+ . ...|+..-..+.. ..... ....++.-....|
T Consensus 770 ----------------gYTER----Y-------Mg~P~~nE~gY~a-------gSV~~---------~VeklpdepnRLl 806 (867)
T KOG2281|consen 770 ----------------GYTER----Y-------MGYPDNNEHGYGA-------GSVAG---------HVEKLPDEPNRLL 806 (867)
T ss_pred ----------------cchhh----h-------cCCCccchhcccc-------hhHHH---------HHhhCCCCCceEE
Confidence 00000 0 0011000000000 00011 1122333345689
Q ss_pred EEEeCCCCCCChHHHHHHHHHh---cCCcEEEEEcCCCccccc-cChHHHHHHHHHHHhc
Q 042555 245 IIWGEQDQIFPLELGHRLKRHI---GESARLVIIENTGHAVNL-EKPKELLKHLKSFLIV 300 (322)
Q Consensus 245 ~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 300 (322)
++||--|.-|.......+...+ ++..++++||+.-|.+-. |...-+-..+..|+.+
T Consensus 807 LvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 807 LVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 9999999998887777666655 256799999999998854 3445566778888865
No 139
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.11 E-value=7.5e-08 Score=74.78 Aligned_cols=111 Identities=16% Similarity=0.123 Sum_probs=77.7
Q ss_pred ceEEEEEeCCceEEEEEecC-CCCCCCCeEEEEcCCCCchhhcH-----HHHHhhhcCC--ceEEeecCCCCCCCCCCCC
Q 042555 24 LRSTSTDLGDGTVMQCWVPK-FPKILKPNLLLLHGFGANAMWQY-----GEFLRHFTPR--FNVYVPDLVFFGESYTTRA 95 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~-~~~~~~~~vv~~hG~~~~~~~~~-----~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~ 95 (322)
+.+..|+. |+..+...... +.......||+.-|.++.-+.-+ ...+..+++. .+|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~- 189 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP- 189 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC-
Confidence 45556666 88877654432 34456779999999887765300 1123333333 899999999999998664
Q ss_pred CCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHhcc
Q 042555 96 DRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 96 ~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.++++.|-.+.++.+ +.+++++.|||+||.++..++.++.
T Consensus 190 --s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 --SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred --CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 4577777777666665 2368999999999999998776653
No 140
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.06 E-value=1.6e-09 Score=85.09 Aligned_cols=91 Identities=23% Similarity=0.307 Sum_probs=65.7
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCC--CCCCCCCCC---CC---HHHHHHHHHHHHHHh-----
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFF--GESYTTRAD---RT---ESFQARCVMRLMEVF----- 113 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~--G~s~~~~~~---~~---~~~~~~~~~~~l~~l----- 113 (322)
..|.||+-||.|+..+ .|..+++.+++. |-|.++|.+|. |........ +. +.+...|+..+|+.+
T Consensus 70 ~~PlvvlshG~Gs~~~-~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVT-GFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCcc-chhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 5689999999999986 799999999998 99999999983 333322111 22 122334444444433
Q ss_pred --------ccccEEEEEEchhHHHHHHHHHhccc
Q 042555 114 --------CVKRMSLVGISYGGFVGYSLAAQFPK 139 (322)
Q Consensus 114 --------~~~~~~lvGhS~Gg~~a~~~a~~~p~ 139 (322)
+..+|.++|||+||+.++.++....+
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhcccccc
Confidence 34689999999999999999876543
No 141
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.05 E-value=1.6e-08 Score=85.22 Aligned_cols=129 Identities=18% Similarity=0.162 Sum_probs=86.4
Q ss_pred eEEEEEeC--CceEEEEEecCCC--CCCCCeEEEEcCCCCchhhcHHHHHhh-------------------hcCCceEEe
Q 042555 25 RSTSTDLG--DGTVMQCWVPKFP--KILKPNLLLLHGFGANAMWQYGEFLRH-------------------FTPRFNVYV 81 (322)
Q Consensus 25 ~~~~i~~~--~g~~l~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~-------------------l~~~~~v~~ 81 (322)
..-++++. .+..++|+..+.. ..+.|.||++.|.+|++. .+..+.+. +.+..+++-
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~ 90 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSS-MWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLF 90 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-T-HHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecc-ccccccccCceEEeecccccccccccccccccceEE
Confidence 44566765 6788998877543 366899999999999986 36443211 112367999
Q ss_pred ecCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHh----c------ccc
Q 042555 82 PDLV-FFGESYTTRA---DRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQ----F------PKV 140 (322)
Q Consensus 82 ~d~~-G~G~s~~~~~---~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~ 140 (322)
+|.| |.|.|..... ..+.++.++++..+|+.+ ...+++|.|-|+||..+..+|.. . +-.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 9955 9999975533 347888899998888765 34589999999999987777654 2 234
Q ss_pred cceeeeeccCCCCC
Q 042555 141 LEKVVLCCSGVCLE 154 (322)
Q Consensus 141 v~~lil~~~~~~~~ 154 (322)
++++++.++.....
T Consensus 171 LkGi~IGng~~dp~ 184 (415)
T PF00450_consen 171 LKGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEEESE-SBHH
T ss_pred cccceecCcccccc
Confidence 88999998877654
No 142
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.05 E-value=1.1e-08 Score=84.52 Aligned_cols=181 Identities=16% Similarity=0.175 Sum_probs=120.6
Q ss_pred CCCeEEEEcCCC-C--chhh--cHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------Hhc
Q 042555 48 LKPNLLLLHGFG-A--NAMW--QYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLME--------VFC 114 (322)
Q Consensus 48 ~~~~vv~~hG~~-~--~~~~--~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~--------~l~ 114 (322)
..|.++++||.+ . ++++ .|........+...+..+|++. +....++...++.+..+.+ ++.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n------~igG~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNN------PIGGANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccC------CCCCcchHHHHHHHHHHhhhhhhhhhccCC
Confidence 457889999987 1 2222 3344444444447888888872 1222556666666655554 224
Q ss_pred cccEEEEEEchhHHHHHHHHHhcc-cccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcC
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQFP-KVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVN 193 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (322)
..+|+|+|.|+|+.++.+...... ..|+++|+++-+......
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------------------------------------- 291 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------------------------------------- 291 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc-------------------------------------
Confidence 578999999999888877765543 348888888755433211
Q ss_pred CCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEE
Q 042555 194 SKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLV 273 (322)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
.+...+ +.+-.++.|+||+.|.+|..+++...+++.++.....+++
T Consensus 292 ---prgirD-------------------------------E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 292 ---PRGIRD-------------------------------EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred ---ccCCcc-------------------------------hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 111111 2233568899999999999999999999999987778999
Q ss_pred EEcCCCccccccC-------------hHHHHHHHHHHHhccCCCc
Q 042555 274 IIENTGHAVNLEK-------------PKELLKHLKSFLIVDSSLS 305 (322)
Q Consensus 274 ~~~~~gH~~~~~~-------------~~~~~~~i~~fl~~~~~~~ 305 (322)
++.+++|.+-... -..+.++|.+|+.......
T Consensus 338 VI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~~l~c~ 382 (784)
T KOG3253|consen 338 VIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTIALNCT 382 (784)
T ss_pred EecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999875432 1345667777776554443
No 143
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.01 E-value=2.9e-09 Score=81.95 Aligned_cols=124 Identities=17% Similarity=0.102 Sum_probs=84.8
Q ss_pred ceEEEEEeCCceEEEEEe---cCCCCC-CCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCH
Q 042555 24 LRSTSTDLGDGTVMQCWV---PKFPKI-LKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTE 99 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~---~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~ 99 (322)
-.+-.+...||..+.-.. .+...+ .+..|||+-|..|--+ -.-+...+.-.|.|+.+++||++.|.+.+.....
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYE--vG~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~ 291 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYE--VGVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNT 291 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceE--eeeecChHHhCceeeccCCCCccccCCCCCcccc
Confidence 345667777776654322 211122 2457788888766443 2233344445699999999999999877555555
Q ss_pred HHHHHHHHHH-HHHhc--cccEEEEEEchhHHHHHHHHHhcccccceeeeeccC
Q 042555 100 SFQARCVMRL-MEVFC--VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSG 150 (322)
Q Consensus 100 ~~~~~~~~~~-l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 150 (322)
...++.+.++ |..++ .+.|++.|+|.||.-+..+|..||+ |+++|+-++.
T Consensus 292 ~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 292 LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 4545555444 55565 4789999999999999999999997 9999987654
No 144
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.01 E-value=1.4e-07 Score=74.62 Aligned_cols=62 Identities=18% Similarity=0.159 Sum_probs=45.1
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHHHhc----CCcEEEEEcCCCccccc-cChHHHHHHHHHHHh
Q 042555 238 KIAQQTLIIWGEQDQIFPLELGHRLKRHIG----ESARLVIIENTGHAVNL-EKPKELLKHLKSFLI 299 (322)
Q Consensus 238 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~ 299 (322)
..+.|+++.+|..|.++|....+.+.+.++ .+++++.+++.+|.... .......++|.+-++
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFA 283 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHC
Confidence 347899999999999999999988887774 35788888999998643 222333344444443
No 145
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.00 E-value=4.8e-10 Score=89.48 Aligned_cols=108 Identities=15% Similarity=0.222 Sum_probs=64.5
Q ss_pred CCCCCeEEEEcCCCCch-hhcH-HHHHh-hhcC--C-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 042555 46 KILKPNLLLLHGFGANA-MWQY-GEFLR-HFTP--R-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF------ 113 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~-~~~~-~~~~~-~l~~--~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l------ 113 (322)
+.++|++|++|||.++. ...| ..+.. .|.. . +.|+++||...-...-...........+.+..+|..|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 46789999999998887 3234 34444 4555 4 9999999953211100000011222333444444433
Q ss_pred ccccEEEEEEchhHHHHHHHHHhccc--ccceeeeeccCCCC
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQFPK--VLEKVVLCCSGVCL 153 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~~ 153 (322)
..++++|||||+||.+|-.++..... +|..++.++|+.+.
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 45899999999999999999988877 89999999987654
No 146
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.00 E-value=6.1e-09 Score=82.49 Aligned_cols=126 Identities=22% Similarity=0.267 Sum_probs=70.5
Q ss_pred ceEEEEEeCCceEEEEEe-cCCC-CCCCCeEEEEcCCCCchhh---c----------H----HHHHhhhcCC-ceEEeec
Q 042555 24 LRSTSTDLGDGTVMQCWV-PKFP-KILKPNLLLLHGFGANAMW---Q----------Y----GEFLRHFTPR-FNVYVPD 83 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~-~~~~-~~~~~~vv~~hG~~~~~~~---~----------~----~~~~~~l~~~-~~v~~~d 83 (322)
.++..+.+..+..+..+. .+.+ .+..|.||++||-++..+. . + ..+...|+++ |.|+++|
T Consensus 88 ~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D 167 (390)
T PF12715_consen 88 REKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPD 167 (390)
T ss_dssp EEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE-
T ss_pred EEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEc
Confidence 344555556676665443 3333 4567899999997765531 0 1 1246678888 9999999
Q ss_pred CCCCCCCCCCCC-----CCCHHHH---------------HHHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhc
Q 042555 84 LVFFGESYTTRA-----DRTESFQ---------------ARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 84 ~~G~G~s~~~~~-----~~~~~~~---------------~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+|+|+...... .++...+ +-|....++.+ +.++|.++|+|+||..++.+|+..
T Consensus 168 ~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD 247 (390)
T PF12715_consen 168 ALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD 247 (390)
T ss_dssp -TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-
T ss_pred cccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc
Confidence 999999865421 1122222 12233345554 457899999999999999999986
Q ss_pred ccccceeeeeccC
Q 042555 138 PKVLEKVVLCCSG 150 (322)
Q Consensus 138 p~~v~~lil~~~~ 150 (322)
+ +|++.|..+..
T Consensus 248 d-RIka~v~~~~l 259 (390)
T PF12715_consen 248 D-RIKATVANGYL 259 (390)
T ss_dssp T-T--EEEEES-B
T ss_pred h-hhHhHhhhhhh
Confidence 5 78888776543
No 147
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.99 E-value=3.6e-10 Score=84.14 Aligned_cols=87 Identities=16% Similarity=0.183 Sum_probs=51.5
Q ss_pred CeEEEEcCCCCchhhcHHHHHhhhcCC-ce---EEeecCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHhccccEEEE
Q 042555 50 PNLLLLHGFGANAMWQYGEFLRHFTPR-FN---VYVPDLVFFGESYTTRA----DRTESFQARCVMRLMEVFCVKRMSLV 121 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~lv 121 (322)
.||||+||.+++....|..+.+.|.++ |. ++++++-....+..... ..+..++++-+.++++.-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 489999999985545799999999888 87 89999843332211100 11112334444445555587 99999
Q ss_pred EEchhHHHHHHHHHhc
Q 042555 122 GISYGGFVGYSLAAQF 137 (322)
Q Consensus 122 GhS~Gg~~a~~~a~~~ 137 (322)
|||+||.++..+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999999888654
No 148
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.97 E-value=3.2e-09 Score=87.71 Aligned_cols=90 Identities=9% Similarity=0.091 Sum_probs=68.4
Q ss_pred hcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHH----HHHhccccEEEEEEchhHHHHHHHHHhccc
Q 042555 64 WQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRL----MEVFCVKRMSLVGISYGGFVGYSLAAQFPK 139 (322)
Q Consensus 64 ~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~ 139 (322)
..|..+++.|.+...+...|++|+|.+.... ...++..+++.++ .+..+.++++|+||||||.++..++..+|+
T Consensus 108 ~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKEGKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred HHHHHHHHHHHHcCCccCCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCH
Confidence 3599999999988445589999999987652 2233444444444 445567899999999999999999998876
Q ss_pred c----cceeeeeccCCCCCc
Q 042555 140 V----LEKVVLCCSGVCLEE 155 (322)
Q Consensus 140 ~----v~~lil~~~~~~~~~ 155 (322)
. |+++|.++++.....
T Consensus 186 ~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 186 VFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred hHHhHhccEEEECCCCCCCc
Confidence 3 789999988766554
No 149
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.97 E-value=1.2e-08 Score=77.52 Aligned_cols=104 Identities=13% Similarity=0.210 Sum_probs=70.1
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCC------CC-CC--------------CC------
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESY------TT-RA--------------DR------ 97 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~------~~-~~--------------~~------ 97 (322)
+++-|.|||-||++++... |..+.-.|+.+ |-|.+++.|-+..+. .+ .+ ..
T Consensus 115 ~~k~PvvvFSHGLggsRt~-YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ir 193 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTL-YSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIR 193 (399)
T ss_pred CCCccEEEEecccccchhh-HHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEee
Confidence 4567999999999999975 99999999998 999999998654431 00 00 00
Q ss_pred --CHHHHHHHHHHHH---HHh------------------------ccccEEEEEEchhHHHHHHHHHhcccccceeeeec
Q 042555 98 --TESFQARCVMRLM---EVF------------------------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCC 148 (322)
Q Consensus 98 --~~~~~~~~~~~~l---~~l------------------------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~ 148 (322)
....-++.+..++ +.+ ...++.++|||+||..++...+.+. .++..|+++
T Consensus 194 Neqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD 272 (399)
T KOG3847|consen 194 NEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALD 272 (399)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeee
Confidence 0111122222222 221 1246889999999999988877765 488888887
Q ss_pred cCC
Q 042555 149 SGV 151 (322)
Q Consensus 149 ~~~ 151 (322)
+..
T Consensus 273 ~WM 275 (399)
T KOG3847|consen 273 AWM 275 (399)
T ss_pred eee
Confidence 654
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.95 E-value=3.5e-07 Score=67.76 Aligned_cols=103 Identities=17% Similarity=0.216 Sum_probs=74.7
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCc------eEEeecCCCC----CCCCCC-----------CCCCCHHHHHHHHH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRF------NVYVPDLVFF----GESYTT-----------RADRTESFQARCVM 107 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~------~v~~~d~~G~----G~s~~~-----------~~~~~~~~~~~~~~ 107 (322)
.-|.||+||.+|+.. +...++..|.+.+ -++.+|--|. |.=+.. ....+..++...+.
T Consensus 45 ~iPTIfIhGsgG~as-S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 45 AIPTIFIHGSGGTAS-SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred ccceEEEecCCCChh-HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 448899999999996 6889988887664 3566666552 111111 12345666677777
Q ss_pred HHHHHh----ccccEEEEEEchhHHHHHHHHHhccc-----ccceeeeeccCCC
Q 042555 108 RLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK-----VLEKVVLCCSGVC 152 (322)
Q Consensus 108 ~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~ 152 (322)
.++..| +..++.+|||||||.-...|+..+.. .++++|.++++..
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 777665 67899999999999999999987632 4899999988765
No 151
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.93 E-value=5.1e-08 Score=81.57 Aligned_cols=130 Identities=18% Similarity=0.110 Sum_probs=91.6
Q ss_pred ceEEEEEeCCceEEEEEecCCC-CCCCCeEEEEcCCCCchh---h-cHHHHHh---hhcCC-ceEEeecCCCCCCCCCCC
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFP-KILKPNLLLLHGFGANAM---W-QYGEFLR---HFTPR-FNVYVPDLVFFGESYTTR 94 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~-~~~~~~vv~~hG~~~~~~---~-~~~~~~~---~l~~~-~~v~~~d~~G~G~s~~~~ 94 (322)
.....|+..||++|+...+.|. .++.|+++..+-++-... . .-....+ .++.+ |.|+..|.||.|.|++..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 3457888899999998777554 456778888882221111 1 0112223 45555 999999999999999873
Q ss_pred CC-CC-HHHHHHHHHHHHHHhc--cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 95 AD-RT-ESFQARCVMRLMEVFC--VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 95 ~~-~~-~~~~~~~~~~~l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
.. .+ ..+..-|+.+++.... ..+|..+|.|++|...+.+|+..|.-+++++...+..+.
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 33 33 2333556666666653 368999999999999999999998889999888877664
No 152
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.91 E-value=2.4e-08 Score=76.06 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCCeEEEEcCCCCchhhcHH---HHHhhhcCCceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh----ccccE
Q 042555 47 ILKPNLLLLHGFGANAMWQYG---EFLRHFTPRFNVYVPDLVFFGESYTT-RADRTESFQARCVMRLMEVF----CVKRM 118 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~---~~~~~l~~~~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~l----~~~~~ 118 (322)
+.+..+||+||+..+.+..-. .+...+.-...++.+.||+.|.-..- ....+.......+.++|+.+ +.++|
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467799999999988643222 23333333358999999988763221 12223334455666666665 56799
Q ss_pred EEEEEchhHHHHHHHHHhc----c-----cccceeeeeccCCCC
Q 042555 119 SLVGISYGGFVGYSLAAQF----P-----KVLEKVVLCCSGVCL 153 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~----p-----~~v~~lil~~~~~~~ 153 (322)
+|++||||+.+.+...... + .++..+++++|-.+.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999998886542 1 367888999876543
No 153
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.84 E-value=5.2e-07 Score=74.75 Aligned_cols=105 Identities=14% Similarity=0.081 Sum_probs=63.4
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhc-CC----ceEEeecCCCCC-CCCCCCCC-CCHHHHHHHHHHHHHHh-----c
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFT-PR----FNVYVPDLVFFG-ESYTTRAD-RTESFQARCVMRLMEVF-----C 114 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~-~~----~~v~~~d~~G~G-~s~~~~~~-~~~~~~~~~~~~~l~~l-----~ 114 (322)
.+.|+|+++||..-.........++.|. ++ ..++.+|-.+.. ++...... .-...+++++.-++++. +
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999954221111222333332 22 446777753211 11100111 11223456666666654 3
Q ss_pred cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
.++.+|+|+||||..|+.++.++|+++.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 4578999999999999999999999999999999754
No 154
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.82 E-value=2.4e-07 Score=68.96 Aligned_cols=234 Identities=13% Similarity=0.121 Sum_probs=128.4
Q ss_pred CCCCeEEEEcCCCCchhhcHHH--HHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHH--------HHHH----
Q 042555 47 ILKPNLLLLHGFGANAMWQYGE--FLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVM--------RLME---- 111 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~--~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~--------~~l~---- 111 (322)
+.++..+++.|-|.+. + .+. +...+.++ ...+.++-|-+|...++......-+.+.|+. +...
T Consensus 111 K~~~KOG~~a~tgdh~-y-~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~W 188 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHV-Y-TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTW 188 (371)
T ss_pred CcCCeeEEEeecCCce-e-EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 3345566666655554 4 333 23334444 7888899999998865533222222333322 1111
Q ss_pred --HhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHh
Q 042555 112 --VFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRF 189 (322)
Q Consensus 112 --~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (322)
+.|..++.++|-||||.+|...-..++..|.-+=++++....... .+.. +.+ ....+.++...
T Consensus 189 s~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~--teg~------------l~~-~~s~~~~~~~~ 253 (371)
T KOG1551|consen 189 SSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSA--TEGL------------LLQ-DTSKMKRFNQT 253 (371)
T ss_pred ccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhh--hhhh------------hhh-hhHHHHhhccC
Confidence 236789999999999999999999887666655444432211100 0000 000 00111111110
Q ss_pred hhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCc-----EEEEEeCCCCCCChHHHHHHHH
Q 042555 190 SFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQ-----TLIIWGEQDQIFPLELGHRLKR 264 (322)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vl~i~g~~D~~~~~~~~~~~~~ 264 (322)
..+ .......+...+....+...++.......++...... ...+....+| +.++.+++|.++|......+.+
T Consensus 254 t~~-~~~~~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~--~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~ 330 (371)
T KOG1551|consen 254 TNK-SGYTSRNPAQSYHLLSKEQSRNSRKESLIFMRGVMDE--CTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQE 330 (371)
T ss_pred cch-hhhhhhCchhhHHHHHHHhhhcchHHHHHHHHHHHHh--hchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHH
Confidence 000 0001112222222222222223333444444444331 1222333333 6788999999999999999999
Q ss_pred HhcCCcEEEEEcCCCccc-cccChHHHHHHHHHHHhccC
Q 042555 265 HIGESARLVIIENTGHAV-NLEKPKELLKHLKSFLIVDS 302 (322)
Q Consensus 265 ~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~~ 302 (322)
.. |++++..++ +||.. ++-+.+.+.+.|.+-|++..
T Consensus 331 ~W-Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 331 IW-PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred hC-CCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 99 999999998 58975 55677889999999887654
No 155
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.81 E-value=1.5e-06 Score=69.22 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=79.3
Q ss_pred ceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhh--cHHHHHhhhcCC-ceEEeecCCC--CCCCC-------
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMW--QYGEFLRHFTPR-FNVYVPDLVF--FGESY------- 91 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G--~G~s~------- 91 (322)
-+-.++...+..-+..+.....+...-.||++||.+.+.++ ....+...|.+. +.++++.+|. .....
T Consensus 62 ~e~~~L~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~ 141 (310)
T PF12048_consen 62 DEVQWLQAGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAE 141 (310)
T ss_pred hhcEEeecCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCC
Confidence 34556666555555555544344445599999999998842 223455666666 9999988886 11000
Q ss_pred -------CCCCC-------------CCHHH----HHHHHHHHH---HHhccccEEEEEEchhHHHHHHHHHhccc-ccce
Q 042555 92 -------TTRAD-------------RTESF----QARCVMRLM---EVFCVKRMSLVGISYGGFVGYSLAAQFPK-VLEK 143 (322)
Q Consensus 92 -------~~~~~-------------~~~~~----~~~~~~~~l---~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~ 143 (322)
..... ..... +..-+.+.+ ...+..+++|+||+.|+.++..+....+. .+++
T Consensus 142 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~da 221 (310)
T PF12048_consen 142 EVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDA 221 (310)
T ss_pred CCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCe
Confidence 00000 01111 222222333 33355679999999999999999998864 5899
Q ss_pred eeeeccCC
Q 042555 144 VVLCCSGV 151 (322)
Q Consensus 144 lil~~~~~ 151 (322)
+|++++..
T Consensus 222 LV~I~a~~ 229 (310)
T PF12048_consen 222 LVLINAYW 229 (310)
T ss_pred EEEEeCCC
Confidence 99999854
No 156
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=7.2e-08 Score=73.23 Aligned_cols=126 Identities=21% Similarity=0.270 Sum_probs=82.4
Q ss_pred ceEEEEEeCCceEEEEEecCCC--CCCCCeEEEEcCCCCchhhcHHHHH--hhhcCC--ceEEeecC-C------CCCCC
Q 042555 24 LRSTSTDLGDGTVMQCWVPKFP--KILKPNLLLLHGFGANAMWQYGEFL--RHFTPR--FNVYVPDL-V------FFGES 90 (322)
Q Consensus 24 ~~~~~i~~~~g~~l~~~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~--~~l~~~--~~v~~~d~-~------G~G~s 90 (322)
.+...+.. +|.+..|+.+.|. +++.|.||.+||..++.. .+.... +.|++. |-|+.+|- + +.+.+
T Consensus 35 ~~~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sga-g~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~ 112 (312)
T COG3509 35 SSVASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGA-GQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNW 112 (312)
T ss_pred CCcccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChH-HhhcccchhhhhcccCcEEECcCccccccCCCccccc
Confidence 34455555 6666676665432 344579999999999885 355443 556555 88988852 2 22333
Q ss_pred CCCCC----CCCHHHHHHHHHHHHHHhccc--cEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 91 YTTRA----DRTESFQARCVMRLMEVFCVK--RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 91 ~~~~~----~~~~~~~~~~~~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
..+.. ......+++-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 113 ~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 113 FGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 22211 122233344444445555554 89999999999999999999999999998887755
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.77 E-value=9.3e-07 Score=68.40 Aligned_cols=62 Identities=15% Similarity=0.250 Sum_probs=52.0
Q ss_pred CCCCCcEEEEEeCCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCccccc-cChHHHHHHHHHHH
Q 042555 237 PKIAQQTLIIWGEQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNL-EKPKELLKHLKSFL 298 (322)
Q Consensus 237 ~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 298 (322)
....+|-++++++.|.+++.+..++.++... -+++...++++.|..++ ++|+++.+.+.+|+
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 3456899999999999999998888776652 34788889999999987 57999999999885
No 158
>COG3150 Predicted esterase [General function prediction only]
Probab=98.76 E-value=2e-07 Score=64.28 Aligned_cols=90 Identities=16% Similarity=0.156 Sum_probs=64.3
Q ss_pred EEEEcCCCCchhhcHHHH--HhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHH
Q 042555 52 LLLLHGFGANAMWQYGEF--LRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFV 129 (322)
Q Consensus 52 vv~~hG~~~~~~~~~~~~--~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~ 129 (322)
||++||+.++.. +.... .+.+.+..+-+.+--| .....+...++.+..++...+.+...|+|-|+||+.
T Consensus 2 ilYlHGFnSSP~-shka~l~~q~~~~~~~~i~y~~p--------~l~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~ 72 (191)
T COG3150 2 ILYLHGFNSSPG-SHKAVLLLQFIDEDVRDIEYSTP--------HLPHDPQQALKELEKAVQELGDESPLIVGSSLGGYY 72 (191)
T ss_pred eEEEecCCCCcc-cHHHHHHHHHHhccccceeeecC--------CCCCCHHHHHHHHHHHHHHcCCCCceEEeecchHHH
Confidence 899999998875 35432 3444443333333222 345678888999999999998888999999999999
Q ss_pred HHHHHHhcccccceeeeeccCCCC
Q 042555 130 GYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
|.+++.++. +++ |+++|...+
T Consensus 73 At~l~~~~G--ira-v~~NPav~P 93 (191)
T COG3150 73 ATWLGFLCG--IRA-VVFNPAVRP 93 (191)
T ss_pred HHHHHHHhC--Chh-hhcCCCcCc
Confidence 999999875 444 455666543
No 159
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.74 E-value=9.1e-07 Score=65.30 Aligned_cols=190 Identities=17% Similarity=0.229 Sum_probs=98.5
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCCce-EEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPRFN-VYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGG 127 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg 127 (322)
+..|||..|||.+... +..+. +..++. ++++|+|-. +.+. | .-+.+.+.|||+|||-
T Consensus 11 ~~LilfF~GWg~d~~~-f~hL~--~~~~~D~l~~yDYr~l----------~~d~---~------~~~y~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSP-FSHLI--LPENYDVLICYDYRDL----------DFDF---D------LSGYREIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHH-hhhcc--CCCCccEEEEecCccc----------cccc---c------cccCceEEEEEEeHHH
Confidence 4699999999999863 55442 233443 577898722 1110 1 1246899999999999
Q ss_pred HHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcCCCCCCC---CCchh
Q 042555 128 FVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVNSKPVRG---VPSCF 204 (322)
Q Consensus 128 ~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 204 (322)
.+|..+....| ++..|.+++...+.... .++ ....+...+.....+...++.+..+........ .+..-
T Consensus 69 w~A~~~l~~~~--~~~aiAINGT~~Pid~~--~GI----pp~iF~~Tl~~l~ee~~~kF~rrmcg~~~~~~~f~~~~~r~ 140 (213)
T PF04301_consen 69 WAANRVLQGIP--FKRAIAINGTPYPIDDE--YGI----PPAIFAGTLENLSEENLQKFNRRMCGDKELLEKFQSFPPRR 140 (213)
T ss_pred HHHHHHhccCC--cceeEEEECCCCCcCCC--CCC----CHHHHHHHHHhCCHHHHHHHHHHhcCCchhhHHhhcCCcCC
Confidence 99988876654 66666676654332211 000 011122233333444455555555441111000 00000
Q ss_pred -HHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCcccc
Q 042555 205 -LTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVN 283 (322)
Q Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 283 (322)
.++. ......+....... .... .+. =...+.|++|.++|++..+...+.. +.+..++ ++|+++
T Consensus 141 ~~~el--------k~EL~~l~~~~~~~-~~~~--~~~-wd~aiIg~~D~IFpp~nQ~~~W~~~---~~~~~~~-~~Hy~F 204 (213)
T PF04301_consen 141 SFEEL--------KEELAALYEFIKKN-PPAD--LFH-WDKAIIGKKDRIFPPENQKRAWQGR---CTIVEID-APHYPF 204 (213)
T ss_pred CHHHH--------HHHHHHHHHHHhcc-CCCC--Ccc-ccEEEEcCCCEEeCHHHHHHHHhCc---CcEEEec-CCCcCc
Confidence 0000 11111111111110 0000 000 1347889999999999888887653 3566664 799986
Q ss_pred c
Q 042555 284 L 284 (322)
Q Consensus 284 ~ 284 (322)
.
T Consensus 205 ~ 205 (213)
T PF04301_consen 205 F 205 (213)
T ss_pred h
Confidence 4
No 160
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.73 E-value=4.2e-07 Score=65.87 Aligned_cols=103 Identities=15% Similarity=0.109 Sum_probs=75.0
Q ss_pred CCeEEEEcCCCCchhh--cHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcc----ccEEEE
Q 042555 49 KPNLLLLHGFGANAMW--QYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCV----KRMSLV 121 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~----~~~~lv 121 (322)
...|||+-|++..--. .-..+...|.+. |.++.+-++.+ .......++.+.++|+..++++++. ..++++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss---y~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS---YNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc---ccccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 4579999998765421 245667777777 99998887622 1112345677779999999998853 479999
Q ss_pred EEchhHHHHHHHHHh--cccccceeeeeccCCCCC
Q 042555 122 GISYGGFVGYSLAAQ--FPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 122 GhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~~~ 154 (322)
|||.|+.-.+.|..+ .+..+++.|+.+|..+..
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999988888743 366788888888876543
No 161
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.65 E-value=1.1e-05 Score=67.44 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=80.9
Q ss_pred ceEEEEEeCC--ceEEEEEecCC--CCCCCCeEEEEcCCCCchhhcHHHHH---h-------------hh-------cCC
Q 042555 24 LRSTSTDLGD--GTVMQCWVPKF--PKILKPNLLLLHGFGANAMWQYGEFL---R-------------HF-------TPR 76 (322)
Q Consensus 24 ~~~~~i~~~~--g~~l~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~---~-------------~l-------~~~ 76 (322)
...-++++.+ +..++|+..++ ...+.|.|+.+.|.+|++.. +..+. + .| .+.
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~ 115 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM 115 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCceeeCCCchhhc
Confidence 3456677743 57788877543 33467999999999988752 32211 1 11 122
Q ss_pred ceEEeec-CCCCCCCCCCCC-C-CCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHhc---------
Q 042555 77 FNVYVPD-LVFFGESYTTRA-D-RTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQF--------- 137 (322)
Q Consensus 77 ~~v~~~d-~~G~G~s~~~~~-~-~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~--------- 137 (322)
.+++-+| .-|.|.|..... . .+-.+.++++..++... ...+++|.|.|+||..+-.+|..-
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~ 195 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 195 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccC
Confidence 6799999 558999864421 1 12223345666555542 346899999999998777666542
Q ss_pred -ccccceeeeeccCCCC
Q 042555 138 -PKVLEKVVLCCSGVCL 153 (322)
Q Consensus 138 -p~~v~~lil~~~~~~~ 153 (322)
+-.++|+++.++....
T Consensus 196 ~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 196 PPINLQGYMLGNPVTYM 212 (433)
T ss_pred CcccceeeEecCCCcCc
Confidence 1247788888876544
No 162
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.63 E-value=1.1e-05 Score=64.86 Aligned_cols=107 Identities=20% Similarity=0.123 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCCCCchhh---c---HHHHHhhhcCCceEEeecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhccccEE
Q 042555 47 ILKPNLLLLHGFGANAMW---Q---YGEFLRHFTPRFNVYVPDLVFFGESY-TTRADRTESFQARCVMRLMEVFCVKRMS 119 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~---~---~~~~~~~l~~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 119 (322)
+..|+||++||+|-.-.. + ...+...|. ...+++.|+.-...-. ...-...+.+.++-...+++..|.++|+
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 356999999998754321 1 122333444 5688889986432100 1122344556666667777677889999
Q ss_pred EEEEchhHHHHHHHHHhcc-----cccceeeeeccCCCCC
Q 042555 120 LVGISYGGFVGYSLAAQFP-----KVLEKVVLCCSGVCLE 154 (322)
Q Consensus 120 lvGhS~Gg~~a~~~a~~~p-----~~v~~lil~~~~~~~~ 154 (322)
|+|-|.||.+++.+..... ..-+++|+++|.....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999988765421 1357999999988765
No 163
>PLN02606 palmitoyl-protein thioesterase
Probab=98.63 E-value=4.7e-06 Score=64.55 Aligned_cols=101 Identities=15% Similarity=0.121 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCC--CchhhcHHHHHhhhc--CCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--cccEEEE
Q 042555 48 LKPNLLLLHGFG--ANAMWQYGEFLRHFT--PRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC--VKRMSLV 121 (322)
Q Consensus 48 ~~~~vv~~hG~~--~~~~~~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~lv 121 (322)
...|||+.||+| .+.. ....+.+.+. ..+.+..+. .|-+. ...-.....++++.+.+.+.... .+-++++
T Consensus 25 ~~~PvViwHGlgD~~~~~-~~~~~~~~i~~~~~~pg~~v~-ig~~~--~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNG-KVSNLTQFLINHSGYPGTCVE-IGNGV--QDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCc-hHHHHHHHHHhCCCCCeEEEE-ECCCc--ccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 456899999999 4443 4667776664 133333333 22221 11122455666666665555421 1459999
Q ss_pred EEchhHHHHHHHHHhccc--ccceeeeeccCCC
Q 042555 122 GISYGGFVGYSLAAQFPK--VLEKVVLCCSGVC 152 (322)
Q Consensus 122 GhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~~ 152 (322)
|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 999999999999999977 5999999987543
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.63 E-value=9.4e-08 Score=72.30 Aligned_cols=86 Identities=10% Similarity=0.157 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcC---CceEEeecCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHhcc--ccE
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTP---RFNVYVPDLVFFGESYTTRADRTESFQAR----CVMRLMEVFCV--KRM 118 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~---~~~v~~~d~~G~G~s~~~~~~~~~~~~~~----~~~~~l~~l~~--~~~ 118 (322)
+...|||+||+.++.. +|..+...+.. .+.--.+...++.... .....+++..++ .+.+.++.... .++
T Consensus 3 ~~hLvV~vHGL~G~~~-d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHH-HHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 3458999999999985 68887776655 2221122222221111 112234444444 44444443333 489
Q ss_pred EEEEEchhHHHHHHHHH
Q 042555 119 SLVGISYGGFVGYSLAA 135 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~ 135 (322)
.+||||+||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876655
No 165
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=1.9e-07 Score=75.33 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=79.3
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCC-ce---EEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEc
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPR-FN---VYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGIS 124 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS 124 (322)
.-++|++||++.+.. .|..+...+... +. ++.+++++- +.........+.+..-+.+++...+.+++.++|||
T Consensus 59 ~~pivlVhG~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYG-NFLPLDYRLAILGWLTNGVYAFELSGG--DGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcc-hhhhhhhhhcchHHHhccccccccccc--CCCccccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 448999999977775 588877777665 55 888888855 21122344555666777777777788999999999
Q ss_pred hhHHHHHHHHHhcc--cccceeeeeccCCCCC
Q 042555 125 YGGFVGYSLAAQFP--KVLEKVVLCCSGVCLE 154 (322)
Q Consensus 125 ~Gg~~a~~~a~~~p--~~v~~lil~~~~~~~~ 154 (322)
+||.++..++...+ .+|+.++.++++-...
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 99999999999988 8899999998876554
No 166
>PLN02209 serine carboxypeptidase
Probab=98.51 E-value=6.4e-05 Score=62.86 Aligned_cols=128 Identities=18% Similarity=0.241 Sum_probs=81.8
Q ss_pred eEEEEEeCC--ceEEEEEecCC--CCCCCCeEEEEcCCCCchhhcHHHHHh----------------hhc-------CCc
Q 042555 25 RSTSTDLGD--GTVMQCWVPKF--PKILKPNLLLLHGFGANAMWQYGEFLR----------------HFT-------PRF 77 (322)
Q Consensus 25 ~~~~i~~~~--g~~l~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~~----------------~l~-------~~~ 77 (322)
...++++.+ +..+.|+..++ ...+.|.|+++.|.+|++. .+..+.+ .|. +..
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS-~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 118 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC-LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTA 118 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH-hhhHHHhcCCceeccCCCCCCcccceeCCCchhhcC
Confidence 345666643 57788777543 2345799999999998885 3433210 111 226
Q ss_pred eEEeec-CCCCCCCCCCC--CCCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHhc----------
Q 042555 78 NVYVPD-LVFFGESYTTR--ADRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQF---------- 137 (322)
Q Consensus 78 ~v~~~d-~~G~G~s~~~~--~~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~---------- 137 (322)
+++-+| ..|.|.|.... ...+.++.++++..++..+ ...+++|.|.|+||..+-.+|..-
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 799999 55889886432 2223334567777766653 235899999999998776666532
Q ss_pred ccccceeeeeccCCCC
Q 042555 138 PKVLEKVVLCCSGVCL 153 (322)
Q Consensus 138 p~~v~~lil~~~~~~~ 153 (322)
+-.++++++.++....
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 1246788888876654
No 167
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.49 E-value=4.8e-07 Score=70.69 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHh-cc--ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 102 QARCVMRLMEVF-CV--KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 102 ~~~~~~~~l~~l-~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
+.+++..+++.- .. ++..|+|+||||..|+.++.++|+.+.+++.+++....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 455666666654 22 23799999999999999999999999999999986544
No 168
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.49 E-value=1.1e-06 Score=69.00 Aligned_cols=107 Identities=18% Similarity=0.174 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHH---hhhcCCceEEeecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh----ccccE
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFL---RHFTPRFNVYVPDLVFFGESYTTR-ADRTESFQARCVMRLMEVF----CVKRM 118 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~---~~l~~~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~l~~l----~~~~~ 118 (322)
..+..+||+||+..+-+..-...+ .........+.+.||..|.--.-. ...+...-..++..+|+.+ ..++|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 456799999999876543233333 333333788999999766543221 1112222344555555554 56889
Q ss_pred EEEEEchhHHHHHHHHHhc--------ccccceeeeeccCCCC
Q 042555 119 SLVGISYGGFVGYSLAAQF--------PKVLEKVVLCCSGVCL 153 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~--------p~~v~~lil~~~~~~~ 153 (322)
+|++||||.+++++...+- +.+++-+|+.+|-.+.
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 9999999999999887642 3467888888775543
No 169
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.48 E-value=4.3e-05 Score=58.18 Aligned_cols=106 Identities=10% Similarity=0.087 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhH
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGG 127 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg 127 (322)
..|.|+++-.+.|+.....+.-.+.|-....|+..||-.--.-+-....++++++++.+.+.+..+|.+ +++++-|.-+
T Consensus 102 pdPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~ 180 (415)
T COG4553 102 PDPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPT 180 (415)
T ss_pred CCCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCC
Confidence 356788887777765444667777887888999999864333333356789999999999999999955 8889988875
Q ss_pred H-----HHHHHHHhcccccceeeeeccCCCCC
Q 042555 128 F-----VGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 128 ~-----~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
. +++..+...|..-.++++++++.+..
T Consensus 181 vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 181 VPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred chHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 4 44444445677789999999888765
No 170
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.47 E-value=6.4e-05 Score=62.44 Aligned_cols=128 Identities=16% Similarity=0.127 Sum_probs=85.2
Q ss_pred eEEEEEeC--CceEEEEEecCC--CCCCCCeEEEEcCCCCchhhcHHHHHhhhc-------------------CCceEEe
Q 042555 25 RSTSTDLG--DGTVMQCWVPKF--PKILKPNLLLLHGFGANAMWQYGEFLRHFT-------------------PRFNVYV 81 (322)
Q Consensus 25 ~~~~i~~~--~g~~l~~~~~~~--~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~-------------------~~~~v~~ 81 (322)
..-+|.+. .+..++|+..+. .+...|.||.+.|++|.+.. - .+...+. +...++-
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl-~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLf 122 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSL-G-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILF 122 (454)
T ss_pred ccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccch-h-hhhhhcCCeEEcCCCCcceeCCccccccccEEE
Confidence 44677775 588999988653 33457899999999998853 2 3332221 1246888
Q ss_pred ecCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHh----c------ccc
Q 042555 82 PDLV-FFGESYTTRA---DRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQ----F------PKV 140 (322)
Q Consensus 82 ~d~~-G~G~s~~~~~---~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~ 140 (322)
+|.| |.|.|-.... ..+.+..++|...++... ..++++|.|-|++|...-.+|.+ . +-.
T Consensus 123 Ld~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iN 202 (454)
T KOG1282|consen 123 LDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNIN 202 (454)
T ss_pred EecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCccc
Confidence 8887 7888764321 234555667766666432 34789999999999877766653 2 124
Q ss_pred cceeeeeccCCCCC
Q 042555 141 LEKVVLCCSGVCLE 154 (322)
Q Consensus 141 v~~lil~~~~~~~~ 154 (322)
++|+++-++.....
T Consensus 203 LkG~~IGNg~td~~ 216 (454)
T KOG1282|consen 203 LKGYAIGNGLTDPE 216 (454)
T ss_pred ceEEEecCcccCcc
Confidence 78888888766654
No 171
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.42 E-value=5.4e-06 Score=66.80 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=95.5
Q ss_pred ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcC
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVN 193 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (322)
.++++++.|.|==|..++..|+. ..||++++-+.-.... ....+...++....
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN-------------------------~~~~l~h~y~~yG~- 222 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLN-------------------------MKANLEHQYRSYGG- 222 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCC-------------------------cHHHHHHHHHHhCC-
Confidence 56899999999999999999994 4689998876543311 11222222222220
Q ss_pred CCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEE
Q 042555 194 SKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLV 273 (322)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 273 (322)
.-...+.+...+...+.+............. +.....++++|.++|.|..|.+..++...-+...++....+.
T Consensus 223 -~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivD------P~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 223 -NWSFAFQDYYNEGITQQLDTPEFDKLMQIVD------PYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred -CCccchhhhhHhCchhhcCCHHHHHHHHhcC------HHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 0011112222222222222222222222211 222335679999999999999999999999999996677899
Q ss_pred EEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 274 IIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 274 ~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
.+|+++|.... ..+.+.|..|+...
T Consensus 296 ~vPN~~H~~~~---~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 296 YVPNAGHSLIG---SDVVQSLRAFYNRI 320 (367)
T ss_pred eCCCCCcccch---HHHHHHHHHHHHHH
Confidence 99999999866 56677788888764
No 172
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.42 E-value=5.2e-06 Score=70.23 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=73.9
Q ss_pred EEEEEecCC-CCCCCCeEEEEcCCCCchhh--cHHHHHhhhcCC--ceEEeecCCCCCCCCCC-------CCCCCHHHHH
Q 042555 36 VMQCWVPKF-PKILKPNLLLLHGFGANAMW--QYGEFLRHFTPR--FNVYVPDLVFFGESYTT-------RADRTESFQA 103 (322)
Q Consensus 36 ~l~~~~~~~-~~~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~-------~~~~~~~~~~ 103 (322)
..+|+.... -++++|++|++-| -+..+. ....++..|+++ -.++++++|-+|.|.+- -...+.+...
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QAL 93 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQAL 93 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHH
Confidence 345554321 1233665566544 343321 122355667766 68999999999999753 2456889999
Q ss_pred HHHHHHHHHhc-------cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 104 RCVMRLMEVFC-------VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 104 ~~~~~~l~~l~-------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
+|+..+++++. ..|++++|-|+||.+|..+-.+||+.|.+.+..++++..
T Consensus 94 aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 94 ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 99999998763 247999999999999999999999999999998887754
No 173
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.40 E-value=1.7e-06 Score=56.76 Aligned_cols=60 Identities=23% Similarity=0.407 Sum_probs=54.5
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
..|+|++.++.|+..|.+.++.+.+.+ ++++++++++.||..+.....-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999999999999999 889999999999999875556788899999974
No 174
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.40 E-value=3.8e-06 Score=72.48 Aligned_cols=120 Identities=15% Similarity=0.081 Sum_probs=71.6
Q ss_pred CCceEEEEEecCCC--CCCCCeEEEEcCCCCc---hhh-cHHHHHhhhcCCceEEeecCC----CCCCCCCC--CCCCCH
Q 042555 32 GDGTVMQCWVPKFP--KILKPNLLLLHGFGAN---AMW-QYGEFLRHFTPRFNVYVPDLV----FFGESYTT--RADRTE 99 (322)
Q Consensus 32 ~~g~~l~~~~~~~~--~~~~~~vv~~hG~~~~---~~~-~~~~~~~~l~~~~~v~~~d~~----G~G~s~~~--~~~~~~ 99 (322)
.|-..+.++..... .++.|+||++||.+-. ... ....++.... .+.|+.+++| |+..+... .....+
T Consensus 76 Edcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~ 154 (493)
T cd00312 76 EDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGL 154 (493)
T ss_pred CcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhH
Confidence 35556666654321 3567999999996422 211 2233333222 3899999999 33333211 222334
Q ss_pred HHHH---HHHHHHHHHhc--cccEEEEEEchhHHHHHHHHHhc--ccccceeeeeccCCC
Q 042555 100 SFQA---RCVMRLMEVFC--VKRMSLVGISYGGFVGYSLAAQF--PKVLEKVVLCCSGVC 152 (322)
Q Consensus 100 ~~~~---~~~~~~l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lil~~~~~~ 152 (322)
.+.. +.+.+-++.++ .++|.|+|+|.||..+..++... +..++++|+.++...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 4433 33444444554 46899999999999988887762 446888888877554
No 175
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.38 E-value=0.00015 Score=61.78 Aligned_cols=130 Identities=15% Similarity=0.023 Sum_probs=83.1
Q ss_pred eEEEEEeCCceEEEEEec----CCCCCCCCeEEEEcCCCCch-hhcHHHHH-hhhcCCceEEeecCCCCCCCCCC-----
Q 042555 25 RSTSTDLGDGTVMQCWVP----KFPKILKPNLLLLHGFGANA-MWQYGEFL-RHFTPRFNVYVPDLVFFGESYTT----- 93 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~----~~~~~~~~~vv~~hG~~~~~-~~~~~~~~-~~l~~~~~v~~~d~~G~G~s~~~----- 93 (322)
++.+++..||.++.+... -+.++++|.+|.--|.-|.. .-.|.... ..|.+.+--...--||=|.-...
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~G 499 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDG 499 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhh
Confidence 345555578876654332 12456778888877744333 11343322 23333344444455775544321
Q ss_pred ---CCCCCHHHHHHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 94 ---RADRTESFQARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 94 ---~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
....++.++++....+++.- ..+.++++|-|.||++....+...|+.++++|+-.|..+.-
T Consensus 500 K~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 500 KLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVL 565 (682)
T ss_pred hhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchh
Confidence 34567777777766666543 34679999999999999999999999999999988876543
No 176
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.36 E-value=1.3e-05 Score=67.14 Aligned_cols=230 Identities=15% Similarity=0.092 Sum_probs=126.9
Q ss_pred eEEEEEeCCceEEEEEecCCC--CCCCCeEEEEcCCCCchh-hcHHHHH-hhhcCCceEEeecCCCCCCCCCCC----CC
Q 042555 25 RSTSTDLGDGTVMQCWVPKFP--KILKPNLLLLHGFGANAM-WQYGEFL-RHFTPRFNVYVPDLVFFGESYTTR----AD 96 (322)
Q Consensus 25 ~~~~i~~~~g~~l~~~~~~~~--~~~~~~vv~~hG~~~~~~-~~~~~~~-~~l~~~~~v~~~d~~G~G~s~~~~----~~ 96 (322)
+..+.+..||.+|.|.....+ ..+.|++|+--|...-+. -.|.... ..|.+....+..+.||=|+=.+.. -.
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 445556679999999887422 225677776655432221 1244433 445555778888999977654221 11
Q ss_pred CCHHHHHHHHHHHHHHh------ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccch
Q 042555 97 RTESFQARCVMRLMEVF------CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDE 170 (322)
Q Consensus 97 ~~~~~~~~~~~~~l~~l------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 170 (322)
.+-....+|..++.+.| ..+++.+.|-|-||.+.-....++|+.+.++|+--|..+.-.-. .-......
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh-----~l~aG~sW 549 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYH-----LLTAGSSW 549 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhc-----ccccchhh
Confidence 12222345555555555 23678999999999999999999999888887766644322100 00000001
Q ss_pred hhhcccCCChHHHHHHHHhhhcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCC--CCCcEEEEEe
Q 042555 171 AANILVPQTPDKLRDLIRFSFVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPK--IAQQTLIIWG 248 (322)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvl~i~g 248 (322)
+...-.+..++... .+..+ .+...++. .--|+||-.+
T Consensus 550 ~~EYG~Pd~P~d~~--------------------------------------~l~~Y---SPy~nl~~g~kYP~~LITTs 588 (648)
T COG1505 550 IAEYGNPDDPEDRA--------------------------------------FLLAY---SPYHNLKPGQKYPPTLITTS 588 (648)
T ss_pred HhhcCCCCCHHHHH--------------------------------------HHHhc---CchhcCCccccCCCeEEEcc
Confidence 11111111111111 11111 12222222 2247999999
Q ss_pred CCCCCCChHHHHHHHHHhc---CCcEEEEEcCCCccccccChH--HHHHHHHHHHhc
Q 042555 249 EQDQIFPLELGHRLKRHIG---ESARLVIIENTGHAVNLEKPK--ELLKHLKSFLIV 300 (322)
Q Consensus 249 ~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~--~~~~~i~~fl~~ 300 (322)
.+|.-|.+..+++++..+. ..+-+.+=-++||..--...+ .-...+..||.+
T Consensus 589 ~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 589 LHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred cccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999988874 122233334689987544332 223445556654
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.29 E-value=1.8e-05 Score=63.49 Aligned_cols=68 Identities=26% Similarity=0.457 Sum_probs=53.9
Q ss_pred CCCCCCC-CcEEEEEeCCCCCCChHHHHHHHHHhcC-CcEEEEEcCCCccccccChH---HHHHHHHHHHhcc
Q 042555 234 CNLPKIA-QQTLIIWGEQDQIFPLELGHRLKRHIGE-SARLVIIENTGHAVNLEKPK---ELLKHLKSFLIVD 301 (322)
Q Consensus 234 ~~l~~i~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~~ 301 (322)
..+..+. +|+++++|.+|..+|......+.+.... ..+...+++++|........ +..+.+.+|+.+.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 3344555 7999999999999999999999988844 46888889999998764433 6788888998764
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.21 E-value=2.3e-05 Score=67.63 Aligned_cols=102 Identities=16% Similarity=0.104 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhc-----------------CCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFT-----------------PRFNVYVPDLVFFGESYTTRADRTESFQARCVMRL 109 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~-----------------~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 109 (322)
-++-||+|++|..|+.. +-+.++..-. .+++.+++|+-+- - ..-...+..++++-+.+.
T Consensus 87 lsGIPVLFIPGNAGSyK-QvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~-tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYK-QVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F-TAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCCCchH-HHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h-hhhccHhHHHHHHHHHHH
Confidence 45779999999998875 4555543322 1267777776420 0 001234566666666665
Q ss_pred HHHh-----c--------cccEEEEEEchhHHHHHHHHHh---cccccceeeeeccCCC
Q 042555 110 MEVF-----C--------VKRMSLVGISYGGFVGYSLAAQ---FPKVLEKVVLCCSGVC 152 (322)
Q Consensus 110 l~~l-----~--------~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lil~~~~~~ 152 (322)
|+.. + ...++++||||||.+|...+.. .+..|.-++..+++..
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 5543 2 2359999999999999877653 2445666676665543
No 179
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=9.9e-05 Score=62.47 Aligned_cols=131 Identities=16% Similarity=0.031 Sum_probs=82.4
Q ss_pred CceEEEEEeCCceEEE----EEecCCCCCCCCeEEEEcCCCCch-hhcHHHHHhhhcCC-ceEEeecCCCCCCCCC---C
Q 042555 23 GLRSTSTDLGDGTVMQ----CWVPKFPKILKPNLLLLHGFGANA-MWQYGEFLRHFTPR-FNVYVPDLVFFGESYT---T 93 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~----~~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~---~ 93 (322)
..+...+...||..+. |.......+++|.+|..+|.-+-+ .-.|..-...|... +.....|.||=|.-.. .
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 5566777778996554 322222345788888888754322 11343322223334 6666678898554432 1
Q ss_pred -----CCCCCHHHHHHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 94 -----RADRTESFQARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 94 -----~~~~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
....+++++......+++.- ..++..+.|.|.||.++..++..+|+.+.++|+-.|..+.
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDv 586 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDV 586 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceeh
Confidence 22345555555544444431 3478999999999999999999999999999887776543
No 180
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.13 E-value=0.00082 Score=54.56 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=31.5
Q ss_pred ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 116 KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
-|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 3899999999999999999999998988876665443
No 181
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.07 E-value=2.7e-05 Score=56.32 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcCCCCchhhcHH--HHHhhhc-CC-ceEEeecC--CCC---CCCCCC-----------------CCCCCH
Q 042555 46 KILKPNLLLLHGFGANAMWQYG--EFLRHFT-PR-FNVYVPDL--VFF---GESYTT-----------------RADRTE 99 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~--~~~~~l~-~~-~~v~~~d~--~G~---G~s~~~-----------------~~~~~~ 99 (322)
++.-|++.++-|+.++.+. +- ...+..+ ++ ..|+.+|- ||. |+++.- ...+.+
T Consensus 41 ~k~~P~lf~LSGLTCT~~N-fi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrM 119 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHEN-FIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRM 119 (283)
T ss_pred CCcCceEEEecCCcccchh-hHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhH
Confidence 3446899999999998763 32 1223333 33 78899985 442 222100 001111
Q ss_pred -HHHHHHHHHHHHH----hccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 100 -SFQARCVMRLMEV----FCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 100 -~~~~~~~~~~l~~----l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
+..++.+.+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|...+
T Consensus 120 YdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 120 YDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 2223445555542 24567899999999999999999999988888777775543
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.05 E-value=7.3e-05 Score=58.19 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=66.7
Q ss_pred CCCCeEEEEcCCCCchhh-cHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--cccEEEE
Q 042555 47 ILKPNLLLLHGFGANAMW-QYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC--VKRMSLV 121 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~lv 121 (322)
+...|+|+.||+|.+... ....+.+.+.+. ..+.++.. |.+..........++++.+.+.+.... .+-++++
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 345689999999876532 233444444222 44444443 333333334456666766666655421 1459999
Q ss_pred EEchhHHHHHHHHHhccc--ccceeeeeccCC
Q 042555 122 GISYGGFVGYSLAAQFPK--VLEKVVLCCSGV 151 (322)
Q Consensus 122 GhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 151 (322)
|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 999999999999999987 599999998754
No 183
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.02 E-value=0.00051 Score=55.45 Aligned_cols=60 Identities=18% Similarity=0.346 Sum_probs=49.4
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhc-----------------------CC-cEEEEEcCCCccccccChHHHHHHHH
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIG-----------------------ES-ARLVIIENTGHAVNLEKPKELLKHLK 295 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~gH~~~~~~~~~~~~~i~ 295 (322)
.++||+..|+.|.+++.-..+.+.+.+. .+ .+++++-+|||++. .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999999999887777776662 12 56677789999996 58999999999
Q ss_pred HHHhc
Q 042555 296 SFLIV 300 (322)
Q Consensus 296 ~fl~~ 300 (322)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 184
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.95 E-value=4e-05 Score=63.50 Aligned_cols=83 Identities=12% Similarity=0.150 Sum_probs=59.6
Q ss_pred cHHHHHhhhcCC-c------eEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---ccccEEEEEEchhHHHHHHHH
Q 042555 65 QYGEFLRHFTPR-F------NVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 65 ~~~~~~~~l~~~-~------~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a 134 (322)
.|..+++.|.+. | ...-+|+|- .....+.+...+...++.. ..++++|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~--------~~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL--------SPAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh--------chhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 488999998763 2 233378881 1113445566666666554 358999999999999999998
Q ss_pred Hhccc------ccceeeeeccCCCCCc
Q 042555 135 AQFPK------VLEKVVLCCSGVCLEE 155 (322)
Q Consensus 135 ~~~p~------~v~~lil~~~~~~~~~ 155 (322)
...+. .|+++|.++++.....
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 88743 5999999998876553
No 185
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.91 E-value=0.00018 Score=57.71 Aligned_cols=101 Identities=16% Similarity=0.328 Sum_probs=76.2
Q ss_pred CeEEEEcCCCCchhhcHHH---HHhhhcCC--ceEEeecCCCCCCCCCCC----------CCCCHHHHHHHHHHHHHHhc
Q 042555 50 PNLLLLHGFGANAMWQYGE---FLRHFTPR--FNVYVPDLVFFGESYTTR----------ADRTESFQARCVMRLMEVFC 114 (322)
Q Consensus 50 ~~vv~~hG~~~~~~~~~~~---~~~~l~~~--~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~~~~~~l~~l~ 114 (322)
.||+|.-|.-|+-++ |.. ++-.++.. --+|-.+.|-+|+|.+-. ...+.+...+|...++.++.
T Consensus 81 gPIffYtGNEGdie~-Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEW-FANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLK 159 (492)
T ss_pred CceEEEeCCcccHHH-HHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHh
Confidence 579999998888753 432 44455554 568889999999996431 23466666778888887773
Q ss_pred ------cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 115 ------VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 115 ------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
..+++.+|-|+||+++..+=.+||..|.|.+..+++.
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 3589999999999999999999999888877766554
No 186
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.88 E-value=5e-05 Score=44.27 Aligned_cols=45 Identities=20% Similarity=0.202 Sum_probs=26.8
Q ss_pred CCCceEEEEEeCCceEEEEEecCCCC------CCCCeEEEEcCCCCchhhcH
Q 042555 21 NAGLRSTSTDLGDGTVMQCWVPKFPK------ILKPNLLLLHGFGANAMWQY 66 (322)
Q Consensus 21 ~~~~~~~~i~~~~g~~l~~~~~~~~~------~~~~~vv~~hG~~~~~~~~~ 66 (322)
....++..|++.||..|...+.+.+. +++|+|++.||+.+++. .|
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~-~w 59 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSD-DW 59 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GG-GG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChH-HH
Confidence 45678999999999988877754332 46789999999999986 46
No 187
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.88 E-value=0.00013 Score=60.16 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=73.2
Q ss_pred CCceEEEEEecCCCCCCCCeEEEEcCCC----CchhhcHHHHHhhhcCC--ceEEeecCCC--CCCCC--------CCCC
Q 042555 32 GDGTVMQCWVPKFPKILKPNLLLLHGFG----ANAMWQYGEFLRHFTPR--FNVYVPDLVF--FGESY--------TTRA 95 (322)
Q Consensus 32 ~~g~~l~~~~~~~~~~~~~~vv~~hG~~----~~~~~~~~~~~~~l~~~--~~v~~~d~~G--~G~s~--------~~~~ 95 (322)
.|...|.++.......+.|++|+|||.+ .+++..|+ -..|+++ +-|+++++|= .|.-+ ....
T Consensus 77 EDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 77 EDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred ccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccc
Confidence 3556667766542344569999999954 22221122 2445544 8889999981 12211 1112
Q ss_pred CCCHHHHH---HHHHHHHHHhcc--ccEEEEEEchhHHHHHHHHHh--cccccceeeeeccCCC
Q 042555 96 DRTESFQA---RCVMRLMEVFCV--KRMSLVGISYGGFVGYSLAAQ--FPKVLEKVVLCCSGVC 152 (322)
Q Consensus 96 ~~~~~~~~---~~~~~~l~~l~~--~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lil~~~~~~ 152 (322)
...+.+++ +.+.+-|+++|. ++|.|+|+|.||+.++.+.+. ....+.++|+.++...
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 23455543 556666777754 679999999999988777654 1235777888887664
No 188
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.84 E-value=8.5e-05 Score=65.00 Aligned_cols=119 Identities=15% Similarity=0.053 Sum_probs=63.7
Q ss_pred CCceEEEEEecCCCCC--CCCeEEEEcCCCCchh----hcHHHHHhhhcC-CceEEeecCC----CCCCCCCC--C-CCC
Q 042555 32 GDGTVMQCWVPKFPKI--LKPNLLLLHGFGANAM----WQYGEFLRHFTP-RFNVYVPDLV----FFGESYTT--R-ADR 97 (322)
Q Consensus 32 ~~g~~l~~~~~~~~~~--~~~~vv~~hG~~~~~~----~~~~~~~~~l~~-~~~v~~~d~~----G~G~s~~~--~-~~~ 97 (322)
.|-..|.++....... +.|++|+|||.+.... ..+.. ...+.+ ..-||.+++| |+-.+... . ..+
T Consensus 106 EDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~-~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 106 EDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG-ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp S---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT-HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred chHHHHhhhhccccccccccceEEEeecccccCCCcccccccc-cccccCCCEEEEEecccccccccccccccccCchhh
Confidence 3556666666542222 4699999999643221 11222 222333 3999999999 33322211 1 445
Q ss_pred CHHHHHHH---HHHHHHHhc--cccEEEEEEchhHHHHHHHHHhc--ccccceeeeeccCC
Q 042555 98 TESFQARC---VMRLMEVFC--VKRMSLVGISYGGFVGYSLAAQF--PKVLEKVVLCCSGV 151 (322)
Q Consensus 98 ~~~~~~~~---~~~~l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lil~~~~~ 151 (322)
.+.|+... +.+-|..+| .++|.|+|||.||..+..++..- ...+.++|+.++..
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 55555443 444444554 46799999999999777666552 24799999998854
No 189
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.83 E-value=0.00058 Score=54.81 Aligned_cols=86 Identities=21% Similarity=0.185 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----ccccEEEEE
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF----CVKRMSLVG 122 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvG 122 (322)
....-||+.|=|+..+. =..+...|.+. +.|+.+|-.-|= ....+.+..++|+..++++. +..++.|+|
T Consensus 259 sd~~av~~SGDGGWr~l-Dk~v~~~l~~~gvpVvGvdsLRYf-----W~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liG 332 (456)
T COG3946 259 SDTVAVFYSGDGGWRDL-DKEVAEALQKQGVPVVGVDSLRYF-----WSERTPEQIAADLSRLIRFYARRWGAKRVLLIG 332 (456)
T ss_pred cceEEEEEecCCchhhh-hHHHHHHHHHCCCceeeeehhhhh-----hccCCHHHHHHHHHHHHHHHHHhhCcceEEEEe
Confidence 34456777776665543 45677888888 999999943221 33568899999999999877 557899999
Q ss_pred EchhHHHHHHHHHhccc
Q 042555 123 ISYGGFVGYSLAAQFPK 139 (322)
Q Consensus 123 hS~Gg~~a~~~a~~~p~ 139 (322)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999887776666553
No 190
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.81 E-value=0.00028 Score=53.33 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=67.9
Q ss_pred CeEEEEcCCCCchh-hcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--cccEEEEEEc
Q 042555 50 PNLLLLHGFGANAM-WQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC--VKRMSLVGIS 124 (322)
Q Consensus 50 ~~vv~~hG~~~~~~-~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~lvGhS 124 (322)
.|+|++||++.+.. .....+.+.+.+. ..|++.|. |-| ..........++++.+.+.+.... .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhccCceEEEEEc
Confidence 68999999998774 1256666666654 77888886 444 222233455566666555555332 2568999999
Q ss_pred hhHHHHHHHHHhccc-ccceeeeeccCC
Q 042555 125 YGGFVGYSLAAQFPK-VLEKVVLCCSGV 151 (322)
Q Consensus 125 ~Gg~~a~~~a~~~p~-~v~~lil~~~~~ 151 (322)
.||.++-.++..-++ .|...|.++++-
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 999999999987643 588888887654
No 191
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.79 E-value=5.1e-05 Score=58.46 Aligned_cols=104 Identities=13% Similarity=0.080 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCCCchh--hcHHHH---HhhhcCCceEEeecCCCCCCCC-CC-CCCCCHHHHHHHHHHHHHHhc--ccc
Q 042555 47 ILKPNLLLLHGFGANAM--WQYGEF---LRHFTPRFNVYVPDLVFFGESY-TT-RADRTESFQARCVMRLMEVFC--VKR 117 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~--~~~~~~---~~~l~~~~~v~~~d~~G~G~s~-~~-~~~~~~~~~~~~~~~~l~~l~--~~~ 117 (322)
++..|||+.||+|.+.. ..+..+ ++..-...-|.+++.- -+.+. .. .-..+..+.++.+.+.+.... .+-
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 45568999999997531 134444 3333334556666652 21110 00 011234445555555555421 156
Q ss_pred EEEEEEchhHHHHHHHHHhccc-ccceeeeeccCC
Q 042555 118 MSLVGISYGGFVGYSLAAQFPK-VLEKVVLCCSGV 151 (322)
Q Consensus 118 ~~lvGhS~Gg~~a~~~a~~~p~-~v~~lil~~~~~ 151 (322)
++++|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999998754
No 192
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.76 E-value=0.0078 Score=45.60 Aligned_cols=90 Identities=20% Similarity=0.202 Sum_probs=58.5
Q ss_pred eEEEEcCC--CCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHH----HHHHHh----cc----
Q 042555 51 NLLLLHGF--GANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVM----RLMEVF----CV---- 115 (322)
Q Consensus 51 ~vv~~hG~--~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~----~~l~~l----~~---- 115 (322)
+|=|+-|. |......|+.+.+.|+++ |.|++.-+. ...+....|+.+. ..++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~---------~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~ 89 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYV---------VTFDHQAIAREVWERFERCLRALQKRGGLDPAY 89 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecC---------CCCcHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 56666663 444555799999999988 999998764 1233333333322 222222 11
Q ss_pred ccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 116 KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
-+++-+|||+||-+-+.+...++..-++-++++-
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2677899999999998888877655566677754
No 193
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.70 E-value=0.0022 Score=49.77 Aligned_cols=104 Identities=14% Similarity=0.066 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCC--CchhhcHHHHHhhhcCC----ceEEeecCCCCCCCCCC-CCCCCHHHH----HHHHHHHHHHh--
Q 042555 47 ILKPNLLLLHGFG--ANAMWQYGEFLRHFTPR----FNVYVPDLVFFGESYTT-RADRTESFQ----ARCVMRLMEVF-- 113 (322)
Q Consensus 47 ~~~~~vv~~hG~~--~~~~~~~~~~~~~l~~~----~~v~~~d~~G~G~s~~~-~~~~~~~~~----~~~~~~~l~~l-- 113 (322)
.+.|++++.||-. .+.. .++.+-..+.+. -.++.+|.- ..... ......+++ ++++.-.++.-
T Consensus 96 ~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEERYP 171 (299)
T ss_pred ccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhccCc
Confidence 4568999999832 2221 133333333333 456666653 11100 111222333 33333333332
Q ss_pred ---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 114 ---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 114 ---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
....-+|+|.|+||.+++..+..+|+++-.++..++.....
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 12446799999999999999999999999999988866443
No 194
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.0007 Score=49.26 Aligned_cols=105 Identities=24% Similarity=0.269 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCCCchhhcHHH----------------HHhhhcCCceEEeecCCC---CCCCC-CC-CCCCCHHHHHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGE----------------FLRHFTPRFNVYVPDLVF---FGESY-TT-RADRTESFQARC 105 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~----------------~~~~l~~~~~v~~~d~~G---~G~s~-~~-~~~~~~~~~~~~ 105 (322)
.....+|++||.|--...+|.. +-+..+..|.|+..+.-- +-.+. .+ ....+..+.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3455899999988655445542 123344458888877531 11111 11 111233333332
Q ss_pred H-HHHHHHhccccEEEEEEchhHHHHHHHHHhccc--ccceeeeeccCC
Q 042555 106 V-MRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPK--VLEKVVLCCSGV 151 (322)
Q Consensus 106 ~-~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~~~~~ 151 (322)
+ ..++.-...+.+.++.||+||...+.+..++|+ +|.++.+.+++.
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2 233333456889999999999999999999874 677777777663
No 195
>COG0627 Predicted esterase [General function prediction only]
Probab=97.59 E-value=0.0005 Score=54.78 Aligned_cols=108 Identities=19% Similarity=0.187 Sum_probs=66.0
Q ss_pred CCCCeEEEEcCCCCchhh--cHHHHHhhhcCC-ceEEeecC--------------CCCCCCCCC---C----C-CCCHHH
Q 042555 47 ILKPNLLLLHGFGANAMW--QYGEFLRHFTPR-FNVYVPDL--------------VFFGESYTT---R----A-DRTESF 101 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~--------------~G~G~s~~~---~----~-~~~~~~ 101 (322)
..-|+++++||..++... ....+-+...+. ..++++|- .|-+.|--. . . .+.++.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 456788888998877421 122222333333 55555422 233332111 1 1 134433
Q ss_pred -HHHHHHHHHHHhcc-----ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 102 -QARCVMRLMEVFCV-----KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 102 -~~~~~~~~l~~l~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
+.+++-+.+++... +...|+||||||.=|+.+|.++|+++..+...++.....
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 34566644443322 268899999999999999999999999999999887665
No 196
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.58 E-value=0.0036 Score=45.32 Aligned_cols=53 Identities=26% Similarity=0.182 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHhc-----cccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 100 SFQARCVMRLMEVFC-----VKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
+.-+.++..+++.+. ..++.++|||+|+.++-..+...+..+..+++++++..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 445667777777763 34789999999999999988886778999999987653
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.55 E-value=0.0067 Score=46.48 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=34.5
Q ss_pred ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
..++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 34668999999999999999999999999999999866
No 198
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.52 E-value=0.00031 Score=50.15 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=35.7
Q ss_pred HHHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHhccc----ccceeeeeccCCC
Q 042555 103 ARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPK----VLEKVVLCCSGVC 152 (322)
Q Consensus 103 ~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lil~~~~~~ 152 (322)
.+.+...++.. ...+++++|||+||.+|..++..... .+..++..+++..
T Consensus 11 ~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 11 ANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 34444444443 46789999999999999999888754 4666777776553
No 199
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.40 E-value=0.0097 Score=54.84 Aligned_cols=97 Identities=14% Similarity=0.211 Sum_probs=71.7
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhcc-ccEEEEEE
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESY-TTRADRTESFQARCVMRLMEVFCV-KRMSLVGI 123 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~l~~l~~-~~~~lvGh 123 (322)
....|++.|+|..-+... .+..++..|. .|-+|.-. ...+..+++..+.....-++.+.. .++.++|+
T Consensus 2120 ~se~~~~Ffv~pIEG~tt-~l~~la~rle---------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTT-ALESLASRLE---------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred cccCCceEEEeccccchH-HHHHHHhhcC---------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 567899999999988775 4777777663 34444332 334566888888888777877754 68999999
Q ss_pred chhHHHHHHHHHhcc--cccceeeeeccCCC
Q 042555 124 SYGGFVGYSLAAQFP--KVLEKVVLCCSGVC 152 (322)
Q Consensus 124 S~Gg~~a~~~a~~~p--~~v~~lil~~~~~~ 152 (322)
|+|+.++..+|.... +....+|++++.+.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999999987643 34566888887654
No 200
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.37 E-value=0.00063 Score=47.76 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
..+.+..+++.....++++.|||+||.+|..++...
T Consensus 50 ~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 50 ILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 345555555555557899999999999999888764
No 201
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.33 E-value=0.00077 Score=44.64 Aligned_cols=45 Identities=20% Similarity=0.274 Sum_probs=28.2
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHH
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEF 69 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~ 69 (322)
.+....+++ +|..+|+....+.+++..|||++||++|+- ..|..+
T Consensus 67 ~~phf~t~I-~g~~iHFih~rs~~~~aiPLll~HGWPgSf-~Ef~~v 111 (112)
T PF06441_consen 67 SFPHFKTEI-DGLDIHFIHVRSKRPNAIPLLLLHGWPGSF-LEFLKV 111 (112)
T ss_dssp TS-EEEEEE-TTEEEEEEEE--S-TT-EEEEEE--SS--G-GGGHHH
T ss_pred cCCCeeEEE-eeEEEEEEEeeCCCCCCeEEEEECCCCccH-HhHHhh
Confidence 455666677 799999988876677788999999999998 456554
No 202
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0042 Score=51.81 Aligned_cols=105 Identities=19% Similarity=0.121 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhh--------------hc-----CCceEEeec-CCCCCCCCC--CCCCCCHHHHH
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRH--------------FT-----PRFNVYVPD-LVFFGESYT--TRADRTESFQA 103 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~--------------l~-----~~~~v~~~d-~~G~G~s~~--~~~~~~~~~~~ 103 (322)
+.+.|.++++.|.+|++. .+..+.+. +. ..-.++-+| .-|.|.|.. .....+.....
T Consensus 98 p~~rPvi~wlNGGPGcSS-~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 98 PANRPVIFWLNGGPGCSS-VTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCCceEEEecCCCChHh-hhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccc
Confidence 346889999999999986 36555321 01 113688999 558888874 34445556666
Q ss_pred HHHHHHHHHh-------c--cccEEEEEEchhHHHHHHHHHhccc---ccceeeeeccCC
Q 042555 104 RCVMRLMEVF-------C--VKRMSLVGISYGGFVGYSLAAQFPK---VLEKVVLCCSGV 151 (322)
Q Consensus 104 ~~~~~~l~~l-------~--~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lil~~~~~ 151 (322)
+|+..+++.+ . ..+.+|+|-|+||.-+..+|..--+ ..++++++.+..
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 6666655543 2 2589999999999988888876544 256666665544
No 203
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.16 E-value=0.0046 Score=51.31 Aligned_cols=106 Identities=16% Similarity=0.232 Sum_probs=77.0
Q ss_pred CCCCCeEEEEcCCCCchh-------hcHHHHHhhhcCCceEEeecCCCCCCCCCCC-------CCCCHHHHHHHHHHHHH
Q 042555 46 KILKPNLLLLHGFGANAM-------WQYGEFLRHFTPRFNVYVPDLVFFGESYTTR-------ADRTESFQARCVMRLME 111 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~-------~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~l~ 111 (322)
..++|.-|+|-|=+.-.. ..|..+++.+. -.|+..++|-+|.|.+.. ...+......|+..+|+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkfg--A~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFG--ATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhC--CeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 456777777777443321 12333333321 689999999999886432 23466777889999998
Q ss_pred Hhcc-------ccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCC
Q 042555 112 VFCV-------KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCL 153 (322)
Q Consensus 112 ~l~~-------~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~ 153 (322)
++.. .+.+.+|.|+-|.++..+=.++|+.+.+.|..++++..
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 8732 38999999999999999999999999999888877654
No 204
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.14 E-value=0.0015 Score=49.45 Aligned_cols=50 Identities=16% Similarity=0.125 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhc----ccccceeeeeccCCCC
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF----PKVLEKVVLCCSGVCL 153 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lil~~~~~~~ 153 (322)
++-+..+++..+ +++.+.|||.||.+|..+|... .++|.++...+++...
T Consensus 72 ~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 72 LAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 444555555554 4699999999999999999874 3578899888876543
No 205
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.03 E-value=0.011 Score=47.23 Aligned_cols=158 Identities=15% Similarity=0.151 Sum_probs=88.4
Q ss_pred HHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhh
Q 042555 111 EVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFS 190 (322)
Q Consensus 111 ~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (322)
..+.++.+.+-|.|--|+.++.-|...| +|.++|-...-.- .....+....+ .
T Consensus 229 ~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~D~L-------------------------ni~a~L~hiyr-s 281 (507)
T COG4287 229 EQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVYDNL-------------------------NIEAQLLHIYR-S 281 (507)
T ss_pred hheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHHhhc-------------------------ccHHHHHHHHH-h
Confidence 3346788999999999999999998887 5776664432110 11111222222 2
Q ss_pred hcCCCCCCCCCchhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCc
Q 042555 191 FVNSKPVRGVPSCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIGESA 270 (322)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~ 270 (322)
+.+ .-+..+.....+...+.+.........+....+... ......++..|-.++.|..|.+.+++.+.-.++.++...
T Consensus 282 YGg-nwpi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~-~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~k 359 (507)
T COG4287 282 YGG-NWPIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYR-NTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEK 359 (507)
T ss_pred hCC-CCCcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHh-hhhhhhhccccceeecccCCcccCCCccceeeccCCCce
Confidence 221 111222222222222222222222222222111110 112234678899999999999999999999999995566
Q ss_pred EEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 271 RLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 271 ~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
-+..+|+..|...- ..+.+.+..|+++
T Consensus 360 aLrmvPN~~H~~~n---~~i~esl~~flnr 386 (507)
T COG4287 360 ALRMVPNDPHNLIN---QFIKESLEPFLNR 386 (507)
T ss_pred eeeeCCCCcchhhH---HHHHHHHHHHHHH
Confidence 78889999998643 2333444555543
No 206
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.00 E-value=0.12 Score=41.83 Aligned_cols=241 Identities=10% Similarity=0.086 Sum_probs=119.7
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhc--cccEEEE
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTT-RADRTESFQARCVMRLMEVFC--VKRMSLV 121 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~-~~~~~~~~~~~~~~~~l~~l~--~~~~~lv 121 (322)
.....+||.+=||.+..+...........+. +.++.+-.|-+-..... ....+......-+..++.... ..++++-
T Consensus 35 ~~s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh 114 (350)
T KOG2521|consen 35 GESEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFH 114 (350)
T ss_pred CCccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEE
Confidence 3444466666677666643234444444444 88888877754333222 223344455566667776664 5678888
Q ss_pred EEchhHHHHHHHH---Hh-c-c---cccceeeeeccCCCCCccccccCCCCccccchhhhcccCCChHHHHHHHHhhhcC
Q 042555 122 GISYGGFVGYSLA---AQ-F-P---KVLEKVVLCCSGVCLEENDMEEGLFPVTDIDEAANILVPQTPDKLRDLIRFSFVN 193 (322)
Q Consensus 122 GhS~Gg~~a~~~a---~~-~-p---~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (322)
-.|+||...+... .. + | +...+++..+.+................ ........+......-
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~-----------~~~~~~~~~~~~~~~i 183 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSS-----------PPDDYVARWARLNYHI 183 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceecccc-----------CchhhHHHHHhcCeEE
Confidence 9999987655433 11 1 2 2456677666555433211000000000 0000000011100000
Q ss_pred CCCCCCCC---chhHHhhHHHhhhhhhhhHHHHHHHHhcccccCCCCCCCCcEEEEEeCCCCCCChHHHHHHHHHhc---
Q 042555 194 SKPVRGVP---SCFLTDFIDVMCTEYVQEKRELIETILKDRKFCNLPKIAQQTLIIWGEQDQIFPLELGHRLKRHIG--- 267 (322)
Q Consensus 194 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--- 267 (322)
..-..... .......... ........++..+. ..-.....+.+.+++..|.++|.+..+++.+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~---~~~~r~~~~~~r~~-----~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g 255 (350)
T KOG2521|consen 184 TLLTMAGNEGGAYLLGPLAEK---ISMSRKYHFLDRYE-----EQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKG 255 (350)
T ss_pred EEEEeeecccchhhhhhhhhc---cccccchHHHHHHH-----hhhhcccccceeecCCccccccHHHHHHHHHHHHhcC
Confidence 00000000 0000000000 00000111111111 1111235678888899999999999988855542
Q ss_pred CCcEEEEEcCCCcccccc-ChHHHHHHHHHHHhccCCCc
Q 042555 268 ESARLVIIENTGHAVNLE-KPKELLKHLKSFLIVDSSLS 305 (322)
Q Consensus 268 ~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~~~~~ 305 (322)
.+++.+-+.++-|..+.. .|..+.+...+|+++.....
T Consensus 256 ~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 256 VNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred ceEEEeeccCccceeeeccCcHHHHHHHHHHHHhccccc
Confidence 345666677888988764 68999999999998765443
No 207
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.94 E-value=0.041 Score=38.41 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=51.3
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCCc-eEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHH
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPRF-NVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFV 129 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~ 129 (322)
.||++-|++..++. ...+. +.+++ -++++|+.... -+.++. ..+.+.+|++|||-.+
T Consensus 13 LIvyFaGwgtpps~-v~HLi--lpeN~dl~lcYDY~dl~------ldfDfs-------------Ay~hirlvAwSMGVwv 70 (214)
T COG2830 13 LIVYFAGWGTPPSA-VNHLI--LPENHDLLLCYDYQDLN------LDFDFS-------------AYRHIRLVAWSMGVWV 70 (214)
T ss_pred EEEEEecCCCCHHH-Hhhcc--CCCCCcEEEEeehhhcC------cccchh-------------hhhhhhhhhhhHHHHH
Confidence 88999999988853 44332 34454 46788986321 112221 1356779999999999
Q ss_pred HHHHHHhcccccceeeeeccCC
Q 042555 130 GYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 130 a~~~a~~~p~~v~~lil~~~~~ 151 (322)
|-++....+ +++.+.+++..
T Consensus 71 AeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 71 AERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred HHHHHhhcc--ccceeeecCCC
Confidence 999988765 66777776543
No 208
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.90 E-value=0.0022 Score=54.71 Aligned_cols=85 Identities=11% Similarity=0.078 Sum_probs=54.4
Q ss_pred cHHHHHhhhcCC-ce-----EEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----ccccEEEEEEchhHHHHHHHH
Q 042555 65 QYGEFLRHFTPR-FN-----VYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 65 ~~~~~~~~l~~~-~~-----v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a 134 (322)
.|..+++.|.+. |. ...+|+|= +. .....-+.+-..+...++.. +.++++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRl---s~--~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRL---SF--QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeeccccccc---Cc--cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 468888888765 43 44566651 11 01112244445555555543 358999999999999999987
Q ss_pred Hhc---------------ccccceeeeeccCCCCC
Q 042555 135 AQF---------------PKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 135 ~~~---------------p~~v~~lil~~~~~~~~ 154 (322)
..- ...|++.|.++++....
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs 266 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGV 266 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheecccccCCc
Confidence 632 12488999998876543
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.84 E-value=0.014 Score=51.28 Aligned_cols=119 Identities=14% Similarity=0.039 Sum_probs=65.8
Q ss_pred CceEEEEEecCCCCCC-CCeEEEEcCCCCchhh--cH--HHHHhhhcC-CceEEeecCC----CCCCCC--CCCCCCCHH
Q 042555 33 DGTVMQCWVPKFPKIL-KPNLLLLHGFGANAMW--QY--GEFLRHFTP-RFNVYVPDLV----FFGESY--TTRADRTES 100 (322)
Q Consensus 33 ~g~~l~~~~~~~~~~~-~~~vv~~hG~~~~~~~--~~--~~~~~~l~~-~~~v~~~d~~----G~G~s~--~~~~~~~~~ 100 (322)
|...+.++........ .|++|++||.+-.... .+ ......+.. +.-|+.+.+| |+.... .....+.+.
T Consensus 95 DCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~ 174 (545)
T KOG1516|consen 95 DCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLF 174 (545)
T ss_pred CCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHH
Confidence 4455655554311111 7999999997543221 12 111222223 2778888887 322221 114556666
Q ss_pred HHHHHHHHH---HHHhc--cccEEEEEEchhHHHHHHHHHhc--ccccceeeeeccCC
Q 042555 101 FQARCVMRL---MEVFC--VKRMSLVGISYGGFVGYSLAAQF--PKVLEKVVLCCSGV 151 (322)
Q Consensus 101 ~~~~~~~~~---l~~l~--~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lil~~~~~ 151 (322)
++...+.-+ |...| .++|.++|||.||..+..++..- ...+.++|..++..
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 655544433 44443 47899999999999887765431 23455666665543
No 210
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.78 E-value=0.0031 Score=48.47 Aligned_cols=24 Identities=25% Similarity=0.293 Sum_probs=20.5
Q ss_pred ccccEEEEEEchhHHHHHHHHHhc
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 456899999999999999888764
No 211
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.76 E-value=0.0013 Score=54.10 Aligned_cols=84 Identities=13% Similarity=0.073 Sum_probs=53.4
Q ss_pred cHHHHHhhhcCC-c------eEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hccccEEEEEEchhHHHHHHH
Q 042555 65 QYGEFLRHFTPR-F------NVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV----FCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 65 ~~~~~~~~l~~~-~------~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~----l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
.|..+++.|..- | .-..+|+|= |..+ ....+.+...+...++. -|.++++|++||||+.+.+.+
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~--~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SYHN--SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---ccCC--hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 477777777643 3 356678771 1111 11223334444444443 366999999999999999999
Q ss_pred HHhccc--------ccceeeeeccCCCC
Q 042555 134 AAQFPK--------VLEKVVLCCSGVCL 153 (322)
Q Consensus 134 a~~~p~--------~v~~lil~~~~~~~ 153 (322)
...+++ .|++.+.++++...
T Consensus 200 l~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 200 LKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HhcccccchhHHHHHHHHHHccCchhcC
Confidence 998876 36777777665543
No 212
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.58 E-value=0.0059 Score=45.22 Aligned_cols=69 Identities=16% Similarity=0.015 Sum_probs=43.6
Q ss_pred HHhhhcCCceEEeecCCCCCCCCC-----C----CCCCCHHHHHHHHHHHHHHh-ccccEEEEEEchhHHHHHHHHHhc
Q 042555 69 FLRHFTPRFNVYVPDLVFFGESYT-----T----RADRTESFQARCVMRLMEVF-CVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 69 ~~~~l~~~~~v~~~d~~G~G~s~~-----~----~~~~~~~~~~~~~~~~l~~l-~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+..+....+|+++=+|=...... . .......+..+....+|++. +.++++|+|||.|+.+..++..++
T Consensus 38 qas~F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344455558899988873221111 0 11123344444555566666 346999999999999999999875
No 213
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.57 E-value=0.38 Score=40.54 Aligned_cols=114 Identities=11% Similarity=0.144 Sum_probs=70.7
Q ss_pred CceEEEEEecCCCCCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 042555 33 DGTVMQCWVPKFPKILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEV 112 (322)
Q Consensus 33 ~g~~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~ 112 (322)
.+..+.|+..+ ++=+.|..|++-|+-..-.+.-..+++.|.. --.+.-|.|=-|.+--.....-.....+-+.+.++.
T Consensus 274 ~reEi~yYFnP-GD~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~-PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~ 351 (511)
T TIGR03712 274 KRQEFIYYFNP-GDFKPPLNVYFSGYRPAEGFEGYFMMKRLGA-PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDY 351 (511)
T ss_pred CCCeeEEecCC-cCCCCCeEEeeccCcccCcchhHHHHHhcCC-CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHH
Confidence 44455555442 5667788899999876443333345666643 334556777555542221111133445666777788
Q ss_pred hcc--ccEEEEEEchhHHHHHHHHHhcccccceeeeeccC
Q 042555 113 FCV--KRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSG 150 (322)
Q Consensus 113 l~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~ 150 (322)
||. +.++|-|-|||..-|+.++++.. -.++|+.-|-
T Consensus 352 LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL 389 (511)
T TIGR03712 352 LGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPL 389 (511)
T ss_pred hCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcc
Confidence 875 56999999999999999998863 3455554443
No 214
>PLN02162 triacylglycerol lipase
Probab=96.53 E-value=0.0082 Score=49.89 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHH
Q 042555 101 FQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
...+.+.+.+......++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34445555665555578999999999999998765
No 215
>PLN00413 triacylglycerol lipase
Probab=96.43 E-value=0.011 Score=49.31 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHH
Q 042555 101 FQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
...+.+.++++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 44566677777766678999999999999998875
No 216
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.39 E-value=0.011 Score=43.32 Aligned_cols=74 Identities=16% Similarity=0.076 Sum_probs=44.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----ccccEEEEEEchhHHHHHHHHHh------cccccceeee
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQ------FPKVLEKVVL 146 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~------~p~~v~~lil 146 (322)
..+..+++|-..... ....+...=++++...++.. ...+++|+|+|.||.++..++.. ..++|.++++
T Consensus 40 ~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvl 117 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVL 117 (179)
T ss_dssp EEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEE
T ss_pred eEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEE
Confidence 777778887322111 01112333344455554433 45689999999999999999877 2457999999
Q ss_pred eccCCC
Q 042555 147 CCSGVC 152 (322)
Q Consensus 147 ~~~~~~ 152 (322)
++-+..
T Consensus 118 fGdP~~ 123 (179)
T PF01083_consen 118 FGDPRR 123 (179)
T ss_dssp ES-TTT
T ss_pred ecCCcc
Confidence 987654
No 217
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.32 E-value=0.08 Score=45.40 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=74.8
Q ss_pred EEEEEecCCCCCCCCeEEEEcCCCCchhhcHHH----HHhhhcCCceEEeecCCCCCCCCC---CCCCCCHHHH------
Q 042555 36 VMQCWVPKFPKILKPNLLLLHGFGANAMWQYGE----FLRHFTPRFNVYVPDLVFFGESYT---TRADRTESFQ------ 102 (322)
Q Consensus 36 ~l~~~~~~~~~~~~~~vv~~hG~~~~~~~~~~~----~~~~l~~~~~v~~~d~~G~G~s~~---~~~~~~~~~~------ 102 (322)
.|.+..+-|..=++ -.+.+-|.|-.....+.. +...+.+.|.+++-|- ||..+.. .....+.+.+
T Consensus 16 ~i~fev~LP~~WNg-R~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~r 93 (474)
T PF07519_consen 16 NIRFEVWLPDNWNG-RFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYR 93 (474)
T ss_pred eEEEEEECChhhcc-CeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhh
Confidence 56655554443233 466665544444333444 5667777799999996 7766643 1112333222
Q ss_pred -----HHHHHHHHHHh---ccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 103 -----ARCVMRLMEVF---CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 103 -----~~~~~~~l~~l---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
+..-.++++.+ ..+.-+..|.|.||.-++..|.+||+..++++.-+|.....
T Consensus 94 a~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 94 ALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 22223334433 34567899999999999999999999999999999887553
No 218
>PLN02571 triacylglycerol lipase
Probab=96.12 E-value=0.01 Score=48.93 Aligned_cols=37 Identities=22% Similarity=0.199 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHhccc--cEEEEEEchhHHHHHHHHHh
Q 042555 100 SFQARCVMRLMEVFCVK--RMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 136 (322)
++..+++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 34556666666665433 68999999999999998875
No 219
>PLN02454 triacylglycerol lipase
Probab=96.09 E-value=0.012 Score=48.54 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=22.8
Q ss_pred HHHHHHHHhccc--cEEEEEEchhHHHHHHHHHh
Q 042555 105 CVMRLMEVFCVK--RMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 105 ~~~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.+..+++..... +|++.|||+||.+|...|..
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334444444333 39999999999999999865
No 220
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.03 E-value=0.018 Score=47.01 Aligned_cols=105 Identities=18% Similarity=0.157 Sum_probs=80.8
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHhc---cccEE
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTT---RADRTESFQARCVMRLMEVFC---VKRMS 119 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~---~~~~~~~~~~~~~~~~l~~l~---~~~~~ 119 (322)
+...|+|++.-|++.+..-........|. -+-+.+++|-+|.|.+. ....+++..+.|..++++.+. .++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 45678999999988765322233333342 46788999999999765 345688889999999888873 36788
Q ss_pred EEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 120 LVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 120 lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
--|.|-||+.++.+=.-||+-|++.|...++..
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 899999999999988889999999988776654
No 221
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.02 E-value=0.017 Score=46.66 Aligned_cols=41 Identities=29% Similarity=0.337 Sum_probs=32.9
Q ss_pred ccccEEEEEEchhHHHHHHHHHhccc-----ccceeeeeccCCCCC
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQFPK-----VLEKVVLCCSGVCLE 154 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lil~~~~~~~~ 154 (322)
+.+|+.|+|||+|+.+.........+ .|+.+++++.+....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 66789999999999998887766544 389999998877554
No 222
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.89 E-value=0.024 Score=46.08 Aligned_cols=88 Identities=19% Similarity=0.158 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCCCC-chhhcHHHHHhhhcCCceEEeecCCCCC-CCCCCCC--CCCHHHHHHHHHHHHHHhccccEEEEE
Q 042555 47 ILKPNLLLLHGFGA-NAMWQYGEFLRHFTPRFNVYVPDLVFFG-ESYTTRA--DRTESFQARCVMRLMEVFCVKRMSLVG 122 (322)
Q Consensus 47 ~~~~~vv~~hG~~~-~~~~~~~~~~~~l~~~~~v~~~d~~G~G-~s~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~lvG 122 (322)
+.+-.||+.||+-+ +.. .|..-+......+.=..+..+|+- ....... ..-=...++++.+.+....++++-.+|
T Consensus 78 k~~HLvVlthGi~~~~~~-~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvg 156 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADME-YWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVG 156 (405)
T ss_pred CCceEEEeccccccccHH-HHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeee
Confidence 34458999999877 454 466666666655222233333332 2211111 111122345555555555578999999
Q ss_pred EchhHHHHHHHHH
Q 042555 123 ISYGGFVGYSLAA 135 (322)
Q Consensus 123 hS~Gg~~a~~~a~ 135 (322)
||+||.++..+..
T Consensus 157 hSLGGLvar~AIg 169 (405)
T KOG4372|consen 157 HSLGGLVARYAIG 169 (405)
T ss_pred eecCCeeeeEEEE
Confidence 9999988765543
No 223
>PLN02408 phospholipase A1
Probab=95.80 E-value=0.018 Score=46.81 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhccc--cEEEEEEchhHHHHHHHHHhc
Q 042555 103 ARCVMRLMEVFCVK--RMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 103 ~~~~~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+.+..+++..... +|++.|||+||.+|..+|...
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 45556666655433 589999999999999988764
No 224
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.58 E-value=0.11 Score=40.94 Aligned_cols=127 Identities=21% Similarity=0.182 Sum_probs=82.6
Q ss_pred EEEeCCceEEEEEecC---CCCCCCCeEEEEcCCCCchhhcHHHHHhh------hc-------CCceEEeecCC-CCCCC
Q 042555 28 STDLGDGTVMQCWVPK---FPKILKPNLLLLHGFGANAMWQYGEFLRH------FT-------PRFNVYVPDLV-FFGES 90 (322)
Q Consensus 28 ~i~~~~g~~l~~~~~~---~~~~~~~~vv~~hG~~~~~~~~~~~~~~~------l~-------~~~~v~~~d~~-G~G~s 90 (322)
++.+.++..+.++.+. ......|..+.+.|.++.+...|..+-+. +. +...++.+|-| |.|.|
T Consensus 7 ~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfS 86 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFS 86 (414)
T ss_pred ceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCcee
Confidence 3444456666665542 12345678889999877664334333211 11 22467777766 78888
Q ss_pred CCC-CC--CCCHHHHHHHHHHHHHHh-------ccccEEEEEEchhHHHHHHHHHhcc---------cccceeeeeccCC
Q 042555 91 YTT-RA--DRTESFQARCVMRLMEVF-------CVKRMSLVGISYGGFVGYSLAAQFP---------KVLEKVVLCCSGV 151 (322)
Q Consensus 91 ~~~-~~--~~~~~~~~~~~~~~l~~l-------~~~~~~lvGhS~Gg~~a~~~a~~~p---------~~v~~lil~~~~~ 151 (322)
.-. .. ..+....+.|+..+++.+ ...|++|+.-|+||-+|..++...- ..+.+++|-++..
T Consensus 87 yVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 87 YVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred eecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 644 22 235677889999999876 3468999999999999998886532 2366788877766
Q ss_pred CCC
Q 042555 152 CLE 154 (322)
Q Consensus 152 ~~~ 154 (322)
.+.
T Consensus 167 SP~ 169 (414)
T KOG1283|consen 167 SPE 169 (414)
T ss_pred Chh
Confidence 553
No 225
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.50 E-value=0.029 Score=40.79 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=47.6
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhc----CCcEEEEEcCCCccccccC---hHHHHHHHHHHHhcc
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIG----ESARLVIIENTGHAVNLEK---PKELLKHLKSFLIVD 301 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~---~~~~~~~i~~fl~~~ 301 (322)
+++.+-|-|+.|.++.+.+.......+. .....++.+|+||+....- .+++.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 4577889999999999887776666552 2356778899999987754 477889999998753
No 226
>PLN02934 triacylglycerol lipase
Probab=95.50 E-value=0.026 Score=47.58 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 101 FQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.....+.++++.....++++.|||+||.+|..+|..
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 345556666666666789999999999999998753
No 227
>PLN02310 triacylglycerol lipase
Probab=95.48 E-value=0.047 Score=45.03 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHhc----cccEEEEEEchhHHHHHHHHHh
Q 042555 101 FQARCVMRLMEVFC----VKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 101 ~~~~~~~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
...+.+..+++.+. ..++.+.|||+||.+|...|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34455666666552 2368999999999999988854
No 228
>PLN02324 triacylglycerol lipase
Probab=95.26 E-value=0.034 Score=45.89 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcc--ccEEEEEEchhHHHHHHHHHh
Q 042555 103 ARCVMRLMEVFCV--KRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 103 ~~~~~~~l~~l~~--~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.+.+..+++.... .+|.+.|||+||.+|...|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3455666665543 368999999999999998864
No 229
>PLN02802 triacylglycerol lipase
Probab=95.07 E-value=0.04 Score=46.50 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHhcc--ccEEEEEEchhHHHHHHHHHhc
Q 042555 102 QARCVMRLMEVFCV--KRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 102 ~~~~~~~~l~~l~~--~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
..+.+..+++.... .+|++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 34455566665533 3689999999999999888754
No 230
>PLN02753 triacylglycerol lipase
Probab=94.80 E-value=0.049 Score=46.19 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhc-----cccEEEEEEchhHHHHHHHHHh
Q 042555 103 ARCVMRLMEVFC-----VKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 103 ~~~~~~~l~~l~-----~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.+.+..+++... ..+|.+.|||+||.+|...|..
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 444555565543 2479999999999999998854
No 231
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.63 E-value=0.061 Score=45.58 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhc----cccEEEEEEchhHHHHHHHHHh
Q 042555 102 QARCVMRLMEVFC----VKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 102 ~~~~~~~~l~~l~----~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
..+++..+++.+. ..++.+.|||+||.+|...|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456667776553 2369999999999999988854
No 232
>PLN02719 triacylglycerol lipase
Probab=94.56 E-value=0.065 Score=45.35 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcc-----ccEEEEEEchhHHHHHHHHHh
Q 042555 103 ARCVMRLMEVFCV-----KRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 103 ~~~~~~~l~~l~~-----~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.+.+..+++.... .+|.+.|||+||.+|...|..
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3445555555432 379999999999999998864
No 233
>PLN02761 lipase class 3 family protein
Probab=94.49 E-value=0.065 Score=45.46 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhc------cccEEEEEEchhHHHHHHHHHh
Q 042555 102 QARCVMRLMEVFC------VKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 102 ~~~~~~~~l~~l~------~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
..+.+..+++... .-+|.+.|||+||.+|...|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455566665552 1369999999999999988853
No 234
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.25 E-value=0.064 Score=38.02 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=36.2
Q ss_pred HHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 109 LMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 109 ~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
++++.-....++-|.||||..|..+.-++|+...++|.+++..+
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 34443345577899999999999999999999999999988664
No 235
>PLN02847 triacylglycerol lipase
Probab=93.86 E-value=0.12 Score=44.70 Aligned_cols=23 Identities=26% Similarity=0.197 Sum_probs=19.3
Q ss_pred ccccEEEEEEchhHHHHHHHHHh
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
..-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 33589999999999999988765
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.55 E-value=0.13 Score=42.06 Aligned_cols=37 Identities=24% Similarity=0.212 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 100 SFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
..+.+++..+++....-++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5667778888888877789999999999999988865
No 237
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=91.34 E-value=2.6 Score=27.43 Aligned_cols=82 Identities=16% Similarity=0.154 Sum_probs=55.8
Q ss_pred cHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHhccccEEEEEEchhH--HHHHHHHHhcccc
Q 042555 65 QYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTE-SFQARCVMRLMEVFCVKRMSLVGISYGG--FVGYSLAAQFPKV 140 (322)
Q Consensus 65 ~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~lvGhS~Gg--~~a~~~a~~~p~~ 140 (322)
.|..+.+.+..+ +..=.+.++..|.+......... +.-...+..+++.+...++++||-|--. -+-..+|.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 355666666655 66666666666555433111122 3556778888899888999999998664 4556678899999
Q ss_pred cceeee
Q 042555 141 LEKVVL 146 (322)
Q Consensus 141 v~~lil 146 (322)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 998764
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.26 E-value=1.3 Score=33.91 Aligned_cols=41 Identities=10% Similarity=0.078 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhc
Q 042555 97 RTESFQARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 97 ~~~~~~~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+..+=++.+.+.++.. ..++++++|+|+|+.++...+.+.
T Consensus 27 ~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 27 ESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred hHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 44555556666666652 347899999999999999887764
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.81 E-value=0.63 Score=36.22 Aligned_cols=38 Identities=26% Similarity=0.360 Sum_probs=26.7
Q ss_pred HHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 110 MEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 110 l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
.+.....++.+-|||+||.+|..+-.++. +-.+.+-+|
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33345578999999999999998887764 334444443
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.81 E-value=0.63 Score=36.22 Aligned_cols=38 Identities=26% Similarity=0.360 Sum_probs=26.7
Q ss_pred HHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 110 MEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 110 l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
.+.....++.+-|||+||.+|..+-.++. +-.+.+-+|
T Consensus 270 ~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 270 RRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred HHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33345578999999999999998887764 334444443
No 241
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=90.74 E-value=0.35 Score=41.61 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCCCCchh--hcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHH---Hhc--ccc
Q 042555 47 ILKPNLLLLHGFGANAM--WQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLME---VFC--VKR 117 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~--~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~---~l~--~~~ 117 (322)
.++-.|+-+||.|.-.. -+-+...+.+++. ..|+.+|+-=--+. +.....++..-...-+|+ .+| .++
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa---PFPRaleEv~fAYcW~inn~allG~TgEr 470 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA---PFPRALEEVFFAYCWAINNCALLGSTGER 470 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC---CCCcHHHHHHHHHHHHhcCHHHhCcccce
Confidence 34557888999874321 1233444444444 89999998422111 222233332222222232 233 379
Q ss_pred EEEEEEchhHHHHHHHHHh----cccccceeeeeccCC
Q 042555 118 MSLVGISYGGFVGYSLAAQ----FPKVLEKVVLCCSGV 151 (322)
Q Consensus 118 ~~lvGhS~Gg~~a~~~a~~----~p~~v~~lil~~~~~ 151 (322)
|+++|-|.||.+.+-.|.+ .=..-+|+++.-++.
T Consensus 471 iv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 471 IVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred EEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 9999999999876555543 222346777766544
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.59 E-value=0.44 Score=41.09 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=26.6
Q ss_pred cccEEEEEEchhHHHHHHHHHhc-----cc------ccceeeeeccCC
Q 042555 115 VKRMSLVGISYGGFVGYSLAAQF-----PK------VLEKVVLCCSGV 151 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~~~-----p~------~v~~lil~~~~~ 151 (322)
.++++.+||||||.++-.+...- |+ ..+|+|+++.+.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 46899999999998887765432 32 356778777664
No 243
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.21 E-value=1.5 Score=37.29 Aligned_cols=44 Identities=23% Similarity=0.295 Sum_probs=33.8
Q ss_pred hccccEEEEEEchhHHHHHHHHHhc-----ccccceeeeeccCCCCCcc
Q 042555 113 FCVKRMSLVGISYGGFVGYSLAAQF-----PKVLEKVVLCCSGVCLEEN 156 (322)
Q Consensus 113 l~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lil~~~~~~~~~~ 156 (322)
+|.+||.+||+|+|+.+.......- -..|..+++++++......
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 3779999999999999887655422 2358899999988866543
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=86.40 E-value=1.8 Score=37.39 Aligned_cols=63 Identities=16% Similarity=0.204 Sum_probs=48.3
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhc----C-------CcEEEEEcCCCcccccc--ChHHHHHHHHHHHhccC
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIG----E-------SARLVIIENTGHAVNLE--KPKELLKHLKSFLIVDS 302 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~~ 302 (322)
.-.+++.||..|.++|+.....+++++. . -.++..+||.+|+.--. .+-.....|.+|+++-.
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGK 428 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCC
Confidence 4689999999999999987777666552 1 25889999999987543 34467889999998643
No 245
>PRK12467 peptide synthase; Provisional
Probab=84.90 E-value=5.6 Score=44.42 Aligned_cols=98 Identities=14% Similarity=-0.012 Sum_probs=68.6
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-cccEEEEEEchh
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC-VKRMSLVGISYG 126 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~lvGhS~G 126 (322)
..+.+++.|...++. +.+..+...+.....++.+..++.-... ....+++.++....+.+.... ..+..+.|+|+|
T Consensus 3691 ~~~~l~~~h~~~r~~-~~~~~l~~~l~~~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3691 GFPALFCRHEGLGTV-FDYEPLAVILEGDRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cccceeeechhhcch-hhhHHHHHHhCCCCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 345699999988887 4688888888777888888776543222 234466677777777776653 357899999999
Q ss_pred HHHHHHHHHhc---ccccceeeeec
Q 042555 127 GFVGYSLAAQF---PKVLEKVVLCC 148 (322)
Q Consensus 127 g~~a~~~a~~~---p~~v~~lil~~ 148 (322)
|.++..++... .+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 99999887653 34455555554
No 246
>PF03283 PAE: Pectinacetylesterase
Probab=84.32 E-value=3.1 Score=34.47 Aligned_cols=40 Identities=30% Similarity=0.410 Sum_probs=26.8
Q ss_pred cccEEEEEEchhHHHHHHHHH----hcccccceeeeeccCCCCC
Q 042555 115 VKRMSLVGISYGGFVGYSLAA----QFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 115 ~~~~~lvGhS~Gg~~a~~~a~----~~p~~v~~lil~~~~~~~~ 154 (322)
.++++|.|.|.||.-++..+- ..|..++-..+.+++....
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLD 198 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccccc
Confidence 478999999999998776553 3465455555555555443
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=80.82 E-value=19 Score=28.67 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=19.9
Q ss_pred ccccEEEEEEchhHHHHHHHHHh
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
..++|.++|+|-||..|-.+|..
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CcceEEEEecCccHHHHHHHHHH
Confidence 34679999999999999999865
No 248
>COG3933 Transcriptional antiterminator [Transcription]
Probab=77.34 E-value=21 Score=30.30 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchh
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYG 126 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~G 126 (322)
+.-..||..||....+ +....+..|-..--+.++|+| -..++.+..+.+.+.+++.+..+=.++=-.||
T Consensus 107 ~~v~vIiiAHG~sTAS--SmaevanrLL~~~~~~aiDMP---------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 107 PRVKVIIIAHGYSTAS--SMAEVANRLLGEEIFIAIDMP---------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred CceeEEEEecCcchHH--HHHHHHHHHhhccceeeecCC---------CcCCHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 3445889999988777 377888888777788999998 56788999999999999988777566777899
Q ss_pred HHHHHHH
Q 042555 127 GFVGYSL 133 (322)
Q Consensus 127 g~~a~~~ 133 (322)
......=
T Consensus 176 SL~~f~~ 182 (470)
T COG3933 176 SLTSFGS 182 (470)
T ss_pred hHHHHHH
Confidence 8766543
No 249
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=76.14 E-value=2.2 Score=34.74 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=24.3
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
+.++++..|.++-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 4455677788999999999998888866543
No 250
>PRK10279 hypothetical protein; Provisional
Probab=75.99 E-value=4 Score=32.89 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=26.7
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhcc
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.+.+++.++..-.++|.|+|+.++..+|....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 455566668888899999999999999997653
No 251
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=75.54 E-value=4.7 Score=33.62 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=37.6
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccC-----hHHHHHHHHHHHh
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEK-----PKELLKHLKSFLI 299 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~-----~~~~~~~i~~fl~ 299 (322)
.-.+++|+|++|++.-.. . .+-+.- .+..+.+.||++|...+.. .++....|.+|-.
T Consensus 351 ~~rmlFVYG~nDPW~A~~-f-~l~~g~-~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEP-F-RLGKGK-RDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCc-c-ccCCCC-cceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 446999999999876321 1 111111 5678888899999876643 3456677777764
No 252
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=75.29 E-value=3.7 Score=33.05 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=24.3
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
+.++++.+|.++-.++|||+|-+.|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3345567788999999999999888877643
No 253
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=75.13 E-value=5 Score=29.19 Aligned_cols=33 Identities=21% Similarity=0.087 Sum_probs=25.8
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhcc
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.+.+++.+...-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 444555557777789999999999999998654
No 254
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=74.39 E-value=4 Score=32.80 Aligned_cols=31 Identities=16% Similarity=0.252 Sum_probs=24.2
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
+.++++..+.++..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3445566688899999999999888877653
No 255
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=74.06 E-value=5 Score=32.46 Aligned_cols=61 Identities=18% Similarity=0.146 Sum_probs=39.8
Q ss_pred cHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 65 QYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTES-FQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 65 ~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
+++.+++.|...-.-++++= -... -..--+.+.+++.++..-.++|-|+|+.++..+|..+
T Consensus 3 d~~rl~r~l~~~~~gLvL~G------------GG~RG~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNSIALVLGG------------GGARGCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCCEEEEECC------------hHHHHHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 46777777776643444431 1111 1223455566666877778999999999999999874
No 256
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=72.19 E-value=5.2 Score=32.39 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=27.2
Q ss_pred HHHHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 105 CVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 105 ~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
-+.+.|++.++..-.|.|.|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345566667888889999999999999999864
No 257
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.94 E-value=7.6 Score=29.71 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=23.7
Q ss_pred HHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 107 MRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+.+++.+.+.-.++|-|.|+.++..+|...
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3344445666668999999999999999754
No 258
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=70.45 E-value=7.1 Score=29.02 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=23.8
Q ss_pred HHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 107 MRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+.+++.+...=.++|-|.||.++..++...
T Consensus 18 l~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 18 LKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 3344455666678999999999999999754
No 259
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=69.72 E-value=7.1 Score=30.89 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=25.6
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
+.+.+++.++..=.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44555666777668999999999999999864
No 260
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=69.09 E-value=5.8 Score=31.76 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.1
Q ss_pred HHHHHhc-cccEEEEEEchhHHHHHHHHHhc
Q 042555 108 RLMEVFC-VKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 108 ~~l~~l~-~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
..+...+ ..+-.++|||+|=+.|+.++...
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445556 88999999999998888777543
No 261
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=68.75 E-value=21 Score=26.93 Aligned_cols=63 Identities=16% Similarity=0.023 Sum_probs=45.7
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEch----hHHHHHHHHHhcc-cccceeeee
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISY----GGFVGYSLAAQFP-KVLEKVVLC 147 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~lil~ 147 (322)
-+|+..|-++ ...++.+.+++.+.++++..+ -.++++|+|. |..++.++|.+.. ..+..++-+
T Consensus 78 d~V~~~~~~~-------~~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 78 DRAILVSDRA-------FAGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CEEEEEeccc-------ccCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4677776543 245678899999999998877 6789999998 8889999988752 134444433
No 262
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=67.91 E-value=29 Score=29.97 Aligned_cols=113 Identities=17% Similarity=0.139 Sum_probs=57.1
Q ss_pred eEEEEEecCCCCCCCCeEEEEcCCCCc---hhh-cHHHHHhhhcCC--ceEEeecCC----C---C-CCCCCCCCCCCHH
Q 042555 35 TVMQCWVPKFPKILKPNLLLLHGFGAN---AMW-QYGEFLRHFTPR--FNVYVPDLV----F---F-GESYTTRADRTES 100 (322)
Q Consensus 35 ~~l~~~~~~~~~~~~~~vv~~hG~~~~---~~~-~~~~~~~~l~~~--~~v~~~d~~----G---~-G~s~~~~~~~~~~ 100 (322)
.-+.++...+.+.+..++|.+-|.|.- +.. .|+ .+.|+.. .-|+.+++| | . |..+. +....+-
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~ea-PGNmGl~ 197 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEA-PGNMGLL 197 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCC-CCccchH
Confidence 344455543334445577888775532 211 122 2334443 566677776 2 1 22222 2333443
Q ss_pred HH---HHHHHHHHHHhcc--ccEEEEEEchhHH-HHHHHHHhc-ccccceeeeeccC
Q 042555 101 FQ---ARCVMRLMEVFCV--KRMSLVGISYGGF-VGYSLAAQF-PKVLEKVVLCCSG 150 (322)
Q Consensus 101 ~~---~~~~~~~l~~l~~--~~~~lvGhS~Gg~-~a~~~a~~~-p~~v~~lil~~~~ 150 (322)
++ .+.+.+-+..+|. +++.|+|-|.|+. +.+++.+=. ...++..|+-++.
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS 254 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGS 254 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCC
Confidence 33 3555666666654 6799999999986 444433211 1234555554443
No 263
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=65.55 E-value=10 Score=27.68 Aligned_cols=31 Identities=29% Similarity=0.266 Sum_probs=23.7
Q ss_pred HHHHHhccccEEEEEEchhHHHHHHHHHhcc
Q 042555 108 RLMEVFCVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 108 ~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.+++.+...=.++|-|.|+.++..++...+
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3444556666689999999999999988754
No 264
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=65.35 E-value=10 Score=28.87 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=25.6
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhcc
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.+.+.+.+...-.+.|.|.|+.++..+|...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 344455556666689999999999999998765
No 265
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=64.09 E-value=5 Score=28.74 Aligned_cols=44 Identities=25% Similarity=0.211 Sum_probs=26.4
Q ss_pred CCCCCCCCC---CCCCCHHHHHHHH----HHHHHHh----ccccEEEEEEchhHH
Q 042555 85 VFFGESYTT---RADRTESFQARCV----MRLMEVF----CVKRMSLVGISYGGF 128 (322)
Q Consensus 85 ~G~G~s~~~---~~~~~~~~~~~~~----~~~l~~l----~~~~~~lvGhS~Gg~ 128 (322)
-|||..... ...++..+++.-+ ..+.+.. .+++|.|+|+|++..
T Consensus 62 VGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 62 VGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp E--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 378777222 3467888888888 3444443 357899999999987
No 266
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=63.86 E-value=80 Score=25.79 Aligned_cols=90 Identities=13% Similarity=-0.007 Sum_probs=49.2
Q ss_pred CCCCeEEEEcCCC----CchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCC--------C--------CCCHHHHHH
Q 042555 47 ILKPNLLLLHGFG----ANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTR--------A--------DRTESFQAR 104 (322)
Q Consensus 47 ~~~~~vv~~hG~~----~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~--------~--------~~~~~~~~~ 104 (322)
..+..|+|+-|.. ...-..--.+...|.+. .+++++=-+|.|.-.-.. . ..++...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 3455777777732 22201233455666663 677777667877652110 0 011111111
Q ss_pred HH-HHHHHHh-ccccEEEEEEchhHHHHHHHHHh
Q 042555 105 CV-MRLMEVF-CVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 105 ~~-~~~l~~l-~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.. .-++.++ ..++|+++|+|-|+..|--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 11 1222333 34789999999999999888864
No 267
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=63.70 E-value=36 Score=24.20 Aligned_cols=57 Identities=16% Similarity=-0.014 Sum_probs=38.2
Q ss_pred HHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccc-EEEEEEchhHHHHHHH
Q 042555 67 GEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKR-MSLVGISYGGFVGYSL 133 (322)
Q Consensus 67 ~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~lvGhS~Gg~~a~~~ 133 (322)
..+...+.++-.|++.|.+|- ..+-+++++.+..+-+. | +. .+++|-|.|=.-++..
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk--------~~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGK--------ALSSEEFADFLERLRDD-G-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCC--------cCChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHHHH
Confidence 456677777788999999863 45556666666555443 4 44 4679999986555544
No 268
>COG3621 Patatin [General function prediction only]
Probab=62.08 E-value=87 Score=25.65 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=34.5
Q ss_pred hcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhcccc----E-EEEEEchhHHHHHHHHHhcc
Q 042555 73 FTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKR----M-SLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 73 l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~----~-~lvGhS~Gg~~a~~~a~~~p 138 (322)
+..+|++..+|=-|. . ......+...+++....+ + .+-|.|.||.+++.+|.-.+
T Consensus 5 ~msk~rIlsldGGGv--r---------G~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 5 LMSKYRILSLDGGGV--R---------GAILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred cccceeEEEecCCcc--c---------cHHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 334577787774321 1 144555666666653333 3 36799999999999987654
No 269
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=61.48 E-value=5.3 Score=33.97 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=26.6
Q ss_pred HHHHHHhccccEEEEEEchhHHHHHHHHHhcccccc
Q 042555 107 MRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLE 142 (322)
Q Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~ 142 (322)
...+.+.+..+=++.|-|.|+.+|..++...++.+.
T Consensus 92 LkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~ 127 (421)
T cd07230 92 LKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIP 127 (421)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHH
Confidence 334444466666899999999999999987665543
No 270
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=60.78 E-value=64 Score=24.45 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCCCeEEEEcCCCCchhhcHHHHHhhhcCC-c-eEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEE
Q 042555 46 KILKPNLLLLHGFGANAMWQYGEFLRHFTPR-F-NVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLV 121 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lv 121 (322)
+.+..+|++.||....+...|..+-..|.+. | .|+....-|+- .++++.+.++.-+.+.++|+
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP-------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP-------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC-------------cHHHHHHHHHHcCCceEEEe
Confidence 3445566677777666543344333334333 4 44444333221 14455555555555555443
No 271
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=60.60 E-value=15 Score=25.12 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=16.4
Q ss_pred CCCCCCeEEEEcCCCCchhh
Q 042555 45 PKILKPNLLLLHGFGANAMW 64 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~ 64 (322)
.++.+|.|+-+||+.|+...
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn 67 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKN 67 (127)
T ss_pred CCCCCCEEEEeecCCCCcHH
Confidence 36788899999999998753
No 272
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=60.57 E-value=50 Score=27.57 Aligned_cols=87 Identities=20% Similarity=0.179 Sum_probs=58.3
Q ss_pred CCeEEEEcCCCCchh------hcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEE
Q 042555 49 KPNLLLLHGFGANAM------WQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVG 122 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~------~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvG 122 (322)
...||++||...++. .+|..+++.+.++-.+-.+|..-.|.-+ .+++.+..+..++... +-.+|.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~------GleeDa~~lR~~a~~~---~~~lva 241 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD------GLEEDAYALRLFAEVG---PELLVA 241 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc------chHHHHHHHHHHHHhC---CcEEEE
Confidence 346999999655431 2699999998887666667766555432 2455555565555543 227888
Q ss_pred EchhHHHHHHHHHhcccccceeeeecc
Q 042555 123 ISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 123 hS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
.|+.=..++ |.+||-++.+++.
T Consensus 242 ~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 242 SSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred ehhhhhhhh-----hhhccceeEEEeC
Confidence 888766554 5789999998865
No 273
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=60.48 E-value=17 Score=26.52 Aligned_cols=30 Identities=27% Similarity=0.296 Sum_probs=22.6
Q ss_pred HHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 108 RLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 108 ~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
+.+++.+...-.++|-|.|+.++..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334444555568999999999999998654
No 274
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=59.84 E-value=67 Score=26.38 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=28.6
Q ss_pred CceEEEEEecCCC---CCCCCeEEEEcCCCCchhhcHHHHHhhhc---CCceEEeecCCC
Q 042555 33 DGTVMQCWVPKFP---KILKPNLLLLHGFGANAMWQYGEFLRHFT---PRFNVYVPDLVF 86 (322)
Q Consensus 33 ~g~~l~~~~~~~~---~~~~~~vv~~hG~~~~~~~~~~~~~~~l~---~~~~v~~~d~~G 86 (322)
.....||....+. .-.+++=+|+||.|.... -..+.++|. ....|+.+|.-+
T Consensus 192 ~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGT--itgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 192 GNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGT--ITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred CCcccccccccHHHHHHhcCCCCEEEeccCCCce--eechhHHHHHhCCCCEEEEeCCCc
Confidence 3334566554321 224556678888766553 233444443 348888888754
No 275
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=57.74 E-value=7.3 Score=32.62 Aligned_cols=38 Identities=8% Similarity=0.124 Sum_probs=28.0
Q ss_pred HHHHHHhccccEEEEEEchhHHHHHHHHHhccccccee
Q 042555 107 MRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKV 144 (322)
Q Consensus 107 ~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 144 (322)
...+.+.+..+=++.|-|.|+.+|..+|...++.+..+
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 33444556777789999999999999999655544444
No 276
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=57.10 E-value=7.1 Score=33.04 Aligned_cols=39 Identities=18% Similarity=0.171 Sum_probs=28.5
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhccccccee
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKV 144 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 144 (322)
+...+.+.+..+=++.|-|.|+.+|..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333444446667789999999999999998766655444
No 277
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=56.95 E-value=21 Score=28.29 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=28.4
Q ss_pred ccEEEEEEchhHHHHHHHHH---hcccccceeeeeccCCCCC
Q 042555 116 KRMSLVGISYGGFVGYSLAA---QFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~---~~p~~v~~lil~~~~~~~~ 154 (322)
.++++.|-|+|++-+..... ..-+++.+.+..+++....
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~ 150 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSP 150 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCCh
Confidence 46999999999876655432 2335799999999876543
No 278
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=56.92 E-value=7.4 Score=31.46 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=26.0
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHHhccccc
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVL 141 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 141 (322)
+.+.+.+.+..+-++.|-|.|+.+|..++...++.+
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334444447777789999999999999987654433
No 279
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=55.76 E-value=14 Score=32.63 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=25.1
Q ss_pred HHHH-HHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 107 MRLM-EVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 107 ~~~l-~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 467899999999999999998888755
No 280
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.64 E-value=0.43 Score=38.04 Aligned_cols=89 Identities=21% Similarity=0.213 Sum_probs=49.6
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecC----------CCCCCCCCCCCCCCHHHH--------HHHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDL----------VFFGESYTTRADRTESFQ--------ARCVM 107 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~----------~G~G~s~~~~~~~~~~~~--------~~~~~ 107 (322)
..-|.+++.||+++..+. .......++.. +.++..+. +|++.+............ ..+..
T Consensus 47 ~~~p~v~~~h~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQ-SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred ccCceEEeccCccccccC-cchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 578899999999998864 44466666666 77666654 344333221111111110 11111
Q ss_pred HHHHHhccccEEEEEEchhHHHHHHHHHhcc
Q 042555 108 RLMEVFCVKRMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 108 ~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
.... ...+....|++.|+..+..++...+
T Consensus 126 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 126 LLGA--SLGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHhh--hcCcceEEEEEeeccchHHHhhcch
Confidence 1111 1256777777777777777776665
No 281
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=54.40 E-value=13 Score=32.87 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=29.5
Q ss_pred EEEEEEchhHHHHHHHHHhcc-cccceeeeeccCCCCC
Q 042555 118 MSLVGISYGGFVGYSLAAQFP-KVLEKVVLCCSGVCLE 154 (322)
Q Consensus 118 ~~lvGhS~Gg~~a~~~a~~~p-~~v~~lil~~~~~~~~ 154 (322)
++-.+.|-||..++..|.+.- ..|++++...|.....
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~ 324 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLP 324 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCC
Confidence 455788999999999998864 4689999888876554
No 282
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=53.55 E-value=22 Score=28.13 Aligned_cols=33 Identities=12% Similarity=0.080 Sum_probs=23.9
Q ss_pred HHHHHHhccc-cEEEEEEchhHHHHHHHHHhccc
Q 042555 107 MRLMEVFCVK-RMSLVGISYGGFVGYSLAAQFPK 139 (322)
Q Consensus 107 ~~~l~~l~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 139 (322)
.+.+.+.+.. .=.++|.|.||.++..++...+.
T Consensus 17 l~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 17 LDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 3344444555 34899999999999999887654
No 283
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=52.17 E-value=26 Score=21.46 Aligned_cols=24 Identities=29% Similarity=0.343 Sum_probs=18.7
Q ss_pred ccccEEEEEEchhHHHHHHHHHhc
Q 042555 114 CVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
+.+++.++|-|.|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 557899999999988888877765
No 284
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=52.02 E-value=25 Score=27.23 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=24.0
Q ss_pred HHHHHHHhccc--cEEEEEEchhHHHHHHHHHhcc
Q 042555 106 VMRLMEVFCVK--RMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 106 ~~~~l~~l~~~--~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
+.+.+.+.++. .-.++|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444445554 3479999999999999998754
No 285
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=51.76 E-value=22 Score=30.73 Aligned_cols=59 Identities=20% Similarity=0.218 Sum_probs=38.1
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhc------CCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIG------ESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
.+++..+|-.|..+|......-.+.++ ....+.++ .+||++..++|+...+.+..|+..
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 355666666666665544433333331 22344555 479999999999999999998864
No 286
>PRK02399 hypothetical protein; Provisional
Probab=51.44 E-value=1.5e+02 Score=25.19 Aligned_cols=97 Identities=13% Similarity=0.053 Sum_probs=59.6
Q ss_pred EEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCC----------CCC-------------CHHHHHHHHHH
Q 042555 53 LLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTR----------ADR-------------TESFQARCVMR 108 (322)
Q Consensus 53 v~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~----------~~~-------------~~~~~~~~~~~ 108 (322)
|++=|...++...+..+.+.+.+. ..|+.+|.-..|....+. ... .++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 445565555544566677777665 899999984333221110 001 11223334444
Q ss_pred HHHHh----ccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 109 LMEVF----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 109 ~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
++..+ .+.-++-+|-|.|..++...+...|--+-+++...-
T Consensus 86 ~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTm 130 (406)
T PRK02399 86 FVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVSTM 130 (406)
T ss_pred HHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEcc
Confidence 54443 345678899999999999999998877777776543
No 287
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=51.35 E-value=34 Score=24.52 Aligned_cols=54 Identities=17% Similarity=0.015 Sum_probs=32.4
Q ss_pred HHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHH
Q 042555 67 GEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGF 128 (322)
Q Consensus 67 ~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ 128 (322)
..+...+.++-.+++.|-.|- ..+-+++++.+..+...-..+=+.++|-+.|=.
T Consensus 58 ~~il~~i~~~~~~i~Ld~~Gk--------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~ 111 (155)
T PF02590_consen 58 ERILKKIPPNDYVILLDERGK--------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGLS 111 (155)
T ss_dssp HHHHCTSHTTSEEEEE-TTSE--------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--
T ss_pred HHHHhhccCCCEEEEEcCCCc--------cCChHHHHHHHHHHHhcCCceEEEEEecCCCCC
Confidence 345555656677899998863 456677777777776653223457899999843
No 288
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=51.33 E-value=1.2e+02 Score=25.78 Aligned_cols=97 Identities=14% Similarity=0.120 Sum_probs=60.4
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCC------------------------HHHHHHH
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRT------------------------ESFQARC 105 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~------------------------~~~~~~~ 105 (322)
+|+++ |...++...+..+.+.+.+. ..++.+|.-=.|....+ ...+ ++.+++-
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~-~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFP-PDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCC-CCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 44444 44444434577777777777 99999997434333221 1111 1222333
Q ss_pred HHHHHHHh----ccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 106 VMRLMEVF----CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 106 ~~~~l~~l----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
+..++..+ .+.-++-+|-|.|..++...+...|--+-+++...-
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST~ 128 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVSTM 128 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEcc
Confidence 44444444 245677899999999999999998877777776543
No 289
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=50.36 E-value=72 Score=24.25 Aligned_cols=38 Identities=5% Similarity=-0.051 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCCCchhh--cHHHHHhhhcCC-ceEEeecC
Q 042555 47 ILKPNLLLLHGFGANAMW--QYGEFLRHFTPR-FNVYVPDL 84 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~--~~~~~~~~l~~~-~~v~~~d~ 84 (322)
+..+.|.|++-.+.+.++ .-......|.+. ..+..+++
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 346789999988888753 123344455554 66665554
No 290
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.88 E-value=31 Score=26.90 Aligned_cols=20 Identities=20% Similarity=0.300 Sum_probs=18.0
Q ss_pred EEEEEchhHHHHHHHHHhcc
Q 042555 119 SLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~p 138 (322)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998754
No 291
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=48.71 E-value=78 Score=22.84 Aligned_cols=47 Identities=15% Similarity=0.023 Sum_probs=25.6
Q ss_pred HHHHHHHHHHh--ccccEEEEEEchhHHHHHHHHHhcccccceeeeecc
Q 042555 103 ARCVMRLMEVF--CVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 103 ~~~~~~~l~~l--~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
.+.+.++++.+ ..++|.++|-|..|...+.++...++.|..++=.+|
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34455555444 347899999999999999988876766776665543
No 292
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=48.41 E-value=82 Score=22.65 Aligned_cols=55 Identities=13% Similarity=-0.110 Sum_probs=34.1
Q ss_pred HHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHH
Q 042555 68 EFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVG 130 (322)
Q Consensus 68 ~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a 130 (322)
.+...+..+-.+|+.|-+|- ..+-+++++.+..+...-..+-++++|-+.|=.-.
T Consensus 59 ~il~~l~~~~~~i~LDe~Gk--------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~~ 113 (157)
T PRK00103 59 RILAALPKGARVIALDERGK--------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLSPA 113 (157)
T ss_pred HHHhhCCCCCEEEEEcCCCC--------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccCHH
Confidence 45556665556899998863 45567777777766333222445788888774333
No 293
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=48.14 E-value=86 Score=22.63 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=47.6
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccccChHHHHHHHHHHHhcc
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNLEKPKELLKHLKSFLIVD 301 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 301 (322)
+..++++...-|.-.+...++++.+.+ .+.++.+|--+|....-++...+.+.+..++.+.
T Consensus 39 ~yD~i~lG~w~d~G~~d~~~~~fl~~l-~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~~ 99 (160)
T PF12641_consen 39 DYDLIFLGFWIDKGTPDKDMKEFLKKL-KGKKVALFGTAGAGPDSEYAKKILKNVEALLPKG 99 (160)
T ss_pred CCCEEEEEcCccCCCCCHHHHHHHHHc-cCCeEEEEEecCCCCchHHHHHHHHHHHHhhccC
Confidence 446888888889888888999999999 7888888877777665566667777777777654
No 294
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=46.01 E-value=1.1e+02 Score=26.32 Aligned_cols=64 Identities=17% Similarity=0.080 Sum_probs=47.8
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccc--cceeeeec
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKV--LEKVVLCC 148 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~~ 148 (322)
|.|+.+|-.|. ...-+++.+.+.++-+.+.+..+.+|--++=|.-|...|..+.+. +.++|+.-
T Consensus 183 ~DvvIvDTAGR--------l~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 183 YDVVIVDTAGR--------LHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred CCEEEEeCCCc--------ccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 56666665542 123456677788888888889999999999999999999987653 67888763
No 295
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=45.31 E-value=29 Score=27.98 Aligned_cols=30 Identities=20% Similarity=0.107 Sum_probs=22.9
Q ss_pred HhccccEEEEEEchhHHHHHHHHHhccccc
Q 042555 112 VFCVKRMSLVGISYGGFVGYSLAAQFPKVL 141 (322)
Q Consensus 112 ~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 141 (322)
+.+..+-++.|.|.|+.+|..++....+.+
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 345566679999999999999998654433
No 296
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=44.10 E-value=27 Score=28.88 Aligned_cols=59 Identities=20% Similarity=0.161 Sum_probs=35.6
Q ss_pred eeeeeeecccccceeecCCCceEEEEEeCCceEEEEEecCCCC---------CCCCeEEEEcCCCCch
Q 042555 4 CFSFTASGDWFFRYSFSNAGLRSTSTDLGDGTVMQCWVPKFPK---------ILKPNLLLLHGFGANA 62 (322)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~l~~~~~~~~~---------~~~~~vv~~hG~~~~~ 62 (322)
.|++..--....+..+-..++++.....+||.++-|..++... -.+|.|.++|.+-..+
T Consensus 431 Gfsl~~~~~g~a~~vL~q~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSAK 498 (506)
T KOG3551|consen 431 GFSLLSEETGAAREVLWQHPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSAK 498 (506)
T ss_pred CeEEEecCCCcchhhhhhChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhhh
Confidence 3444333222233334445566667777899999998886322 2466777779876654
No 297
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=43.78 E-value=26 Score=27.71 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=12.6
Q ss_pred ccccEEEEEEchhHH
Q 042555 114 CVKRMSLVGISYGGF 128 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~ 128 (322)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 457899999999975
No 298
>COG0218 Predicted GTPase [General function prediction only]
Probab=43.76 E-value=38 Score=25.35 Aligned_cols=59 Identities=10% Similarity=0.201 Sum_probs=34.1
Q ss_pred CCCCcEEEEEeCCCCCCChHHH---HHHHHHhc--CCcE--EEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 238 KIAQQTLIIWGEQDQIFPLELG---HRLKRHIG--ESAR--LVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 238 ~i~~Pvl~i~g~~D~~~~~~~~---~~~~~~~~--~~~~--~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
...+|++++.-.-|.+-..+.. ...++.+. +... ++.++-..... -+++.+.|.+++..
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~~ 198 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLKE 198 (200)
T ss_pred HcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhhc
Confidence 4578999999999998765543 33443332 2222 44444322221 36677777777653
No 299
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=42.72 E-value=43 Score=28.83 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=25.0
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccc
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNL 284 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 284 (322)
..+++..|+.|++...... +........++++|++|+.-+
T Consensus 377 tnviFtNG~~DPW~~lgv~----~~~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVT----SDSSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCcccccCC----CCCCCCcccEEECCCeeeccc
Confidence 4799999999998765522 223355667889999998644
No 300
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=42.64 E-value=45 Score=23.76 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=19.5
Q ss_pred HHHHhcc--ccEEEEEEchhHHHHHHHH
Q 042555 109 LMEVFCV--KRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 109 ~l~~l~~--~~~~lvGhS~Gg~~a~~~a 134 (322)
.+.+.+. ..-.+.|.|.|+.++..++
T Consensus 19 ~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 19 ALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 3344444 4457899999999999998
No 301
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=42.63 E-value=48 Score=27.08 Aligned_cols=19 Identities=26% Similarity=0.373 Sum_probs=16.8
Q ss_pred EEEEEchhHHHHHHHHHhc
Q 042555 119 SLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+.|.|.||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5899999999999999754
No 302
>PRK06490 glutamine amidotransferase; Provisional
Probab=42.28 E-value=1.6e+02 Score=22.90 Aligned_cols=86 Identities=15% Similarity=0.142 Sum_probs=45.6
Q ss_pred CCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeec----CC-CCCC------CCCCCCCCCHHHHHHHHHHHHHHhccc
Q 042555 48 LKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPD----LV-FFGE------SYTTRADRTESFQARCVMRLMEVFCVK 116 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d----~~-G~G~------s~~~~~~~~~~~~~~~~~~~l~~l~~~ 116 (322)
+...+|+.|--..... ....++......+.++.+. .| .... +..+...++...+...+.++++..-..
T Consensus 7 ~~~vlvi~h~~~~~~g-~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~~~ 85 (239)
T PRK06490 7 KRPVLIVLHQERSTPG-RVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPLKE 85 (239)
T ss_pred CceEEEEecCCCCCCh-HHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHHHHC
Confidence 4456777787655553 3556555554445555432 11 0000 001111223334556666667654334
Q ss_pred cEEEEEEchhHHHHHHHH
Q 042555 117 RMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a 134 (322)
.+=++|.|+|..+...+.
T Consensus 86 ~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 86 NKPFLGICLGAQMLARHL 103 (239)
T ss_pred CCCEEEECHhHHHHHHHc
Confidence 556999999999877764
No 303
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=41.97 E-value=45 Score=26.06 Aligned_cols=20 Identities=25% Similarity=0.514 Sum_probs=17.5
Q ss_pred EEEEEchhHHHHHHHHHhcc
Q 042555 119 SLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~p 138 (322)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998654
No 304
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.83 E-value=49 Score=26.00 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=18.6
Q ss_pred cEEEEEEchhHHHHHHHHHhcc
Q 042555 117 RMSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p 138 (322)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999988654
No 305
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.27 E-value=47 Score=26.07 Aligned_cols=21 Identities=19% Similarity=0.246 Sum_probs=18.0
Q ss_pred EEEEEEchhHHHHHHHHHhcc
Q 042555 118 MSLVGISYGGFVGYSLAAQFP 138 (322)
Q Consensus 118 ~~lvGhS~Gg~~a~~~a~~~p 138 (322)
-.+.|-|.|+.++..++...+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468999999999999988654
No 306
>PLN03019 carbonic anhydrase
Probab=40.21 E-value=45 Score=27.25 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 34567777888999999999999877666544
No 307
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=40.18 E-value=54 Score=19.77 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=9.0
Q ss_pred CCCeEEEEcCCC
Q 042555 48 LKPNLLLLHGFG 59 (322)
Q Consensus 48 ~~~~vv~~hG~~ 59 (322)
..|.++++||..
T Consensus 30 ~~~~~~lvhGga 41 (71)
T PF10686_consen 30 RHPDMVLVHGGA 41 (71)
T ss_pred hCCCEEEEECCC
Confidence 346788999976
No 308
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=39.88 E-value=83 Score=25.16 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=42.8
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCC-ceEEeecCCC---------------CCCCCCCCCCCCHHHHHHHHHHHHHH
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPR-FNVYVPDLVF---------------FGESYTTRADRTESFQARCVMRLMEV 112 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~-~~v~~~d~~G---------------~G~s~~~~~~~~~~~~~~~~~~~l~~ 112 (322)
-|.|+|.-|.++. .+.|+.. |.|+..||-= .|.-++..-..+.+...+.+.+.++.
T Consensus 252 vPmi~fakG~g~~--------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~ 323 (359)
T KOG2872|consen 252 VPMILFAKGSGGA--------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKD 323 (359)
T ss_pred CceEEEEcCcchH--------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHH
Confidence 4778888775443 2345555 9999999841 12222222234667778888889999
Q ss_pred hccccEEE-EEEc
Q 042555 113 FCVKRMSL-VGIS 124 (322)
Q Consensus 113 l~~~~~~l-vGhS 124 (322)
.|.++.++ .||.
T Consensus 324 fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 324 FGKSRYIANLGHG 336 (359)
T ss_pred hCccceEEecCCC
Confidence 88666544 6774
No 309
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=37.72 E-value=27 Score=28.13 Aligned_cols=20 Identities=30% Similarity=0.479 Sum_probs=16.8
Q ss_pred CCCCCCeEEEEcCCCCchhh
Q 042555 45 PKILKPNLLLLHGFGANAMW 64 (322)
Q Consensus 45 ~~~~~~~vv~~hG~~~~~~~ 64 (322)
+++++|.++=+||+.|+...
T Consensus 105 ~~p~KPLvLSfHG~tGTGKN 124 (344)
T KOG2170|consen 105 PNPRKPLVLSFHGWTGTGKN 124 (344)
T ss_pred CCCCCCeEEEecCCCCCchh
Confidence 46789999999999998853
No 310
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=37.40 E-value=1.8e+02 Score=21.93 Aligned_cols=39 Identities=15% Similarity=-0.031 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 96 DRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 96 ~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
.+..+.++.....+|..++....-++|.|+|..+....+
T Consensus 58 v~~~~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 58 VYDEDPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred CccccccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 344444688888888888766667999999998777654
No 311
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=37.09 E-value=40 Score=27.44 Aligned_cols=22 Identities=27% Similarity=0.299 Sum_probs=18.6
Q ss_pred ccccEEEEEEchhHHHHHHHHH
Q 042555 114 CVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
+.++..+.|||+|=+-|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999988887765
No 312
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=36.63 E-value=92 Score=24.16 Aligned_cols=86 Identities=9% Similarity=-0.059 Sum_probs=41.2
Q ss_pred CCCeEEEEcCCCCc--hhhcHHHHHhhhcCC-ceEEeecCCCCCC---CCCC---CCCCCHHHHHH-----HHHHHHHHh
Q 042555 48 LKPNLLLLHGFGAN--AMWQYGEFLRHFTPR-FNVYVPDLVFFGE---SYTT---RADRTESFQAR-----CVMRLMEVF 113 (322)
Q Consensus 48 ~~~~vv~~hG~~~~--~~~~~~~~~~~l~~~-~~v~~~d~~G~G~---s~~~---~~~~~~~~~~~-----~~~~~l~~l 113 (322)
.+|.|+|++-.... .+.....+...+.+- +.+..++...--. .... ...-+...+.+ .+.+.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 46789999987643 222123344445444 7777776542100 0000 00011111111 122333322
Q ss_pred ccccEEEEEEchhHHHHHHH
Q 042555 114 CVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~ 133 (322)
-.+-..++|.|.|+.++..-
T Consensus 110 ~~~G~~~~G~SAGAii~~~~ 129 (233)
T PRK05282 110 VKNGTPYIGWSAGANVAGPT 129 (233)
T ss_pred HHCCCEEEEECHHHHhhhcc
Confidence 12347799999999886543
No 313
>PRK05665 amidotransferase; Provisional
Probab=36.47 E-value=74 Score=24.82 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 98 TESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 98 ~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
....+...+.++++..-...+=++|.|+|..+...++
T Consensus 72 ~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 3445667777777765333455999999998877665
No 314
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.72 E-value=56 Score=25.54 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=15.8
Q ss_pred EEEEEchhHHHHHHHHH
Q 042555 119 SLVGISYGGFVGYSLAA 135 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~ 135 (322)
.+.|-|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 315
>PLN03014 carbonic anhydrase
Probab=35.58 E-value=60 Score=26.74 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 34566677888999999999999777665543
No 316
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=35.10 E-value=53 Score=18.02 Aligned_cols=28 Identities=4% Similarity=-0.020 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHHHHHHHhccccEEEEEE
Q 042555 96 DRTESFQARCVMRLMEVFCVKRMSLVGI 123 (322)
Q Consensus 96 ~~~~~~~~~~~~~~l~~l~~~~~~lvGh 123 (322)
.+..+.+-.|+...|..+.+..+.++|-
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipGs 32 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPGS 32 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEeccc
Confidence 4567788999999999998888888873
No 317
>PLN00416 carbonate dehydratase
Probab=35.07 E-value=82 Score=24.89 Aligned_cols=33 Identities=15% Similarity=0.100 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
....+.-.+..++.+.|+++|||-=|.+...+.
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 345666777888999999999998777665543
No 318
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=33.80 E-value=52 Score=26.72 Aligned_cols=17 Identities=24% Similarity=0.542 Sum_probs=15.4
Q ss_pred EEEEEchhHHHHHHHHH
Q 042555 119 SLVGISYGGFVGYSLAA 135 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~ 135 (322)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999886
No 319
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=33.31 E-value=1.5e+02 Score=19.77 Aligned_cols=74 Identities=15% Similarity=-0.016 Sum_probs=48.9
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhc-cccEEEEEEchhH
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFC-VKRMSLVGISYGG 127 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~lvGhS~Gg 127 (322)
.||.-|| .... .....+..+... ..+.++++. ...+.+++.+.+.+.++.++ .+.+.++--=+||
T Consensus 2 iii~sHG-~~A~--g~~~~~~~i~G~~~~~i~~~~~~---------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG-SLAE--GLLESAEMILGEDQDNIEAVDLY---------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET-THHH--HHHHHHHHHHTSTCSSEEEEEET---------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc-HHHH--HHHHHHHHHcCCCcccEEEEECc---------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 4788899 3333 245555554443 467777764 45688899999999998885 4667777777777
Q ss_pred HHHHHHHHh
Q 042555 128 FVGYSLAAQ 136 (322)
Q Consensus 128 ~~a~~~a~~ 136 (322)
...-..+..
T Consensus 70 sp~n~a~~~ 78 (116)
T PF03610_consen 70 SPFNEAARL 78 (116)
T ss_dssp HHHHHHHHH
T ss_pred ccchHHHHH
Confidence 655554443
No 320
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.14 E-value=1.9e+02 Score=25.36 Aligned_cols=63 Identities=17% Similarity=0.229 Sum_probs=42.4
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhc---------ccccceeeee
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF---------PKVLEKVVLC 147 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~---------p~~v~~lil~ 147 (322)
|.|+.+|-.|.-.. -..+...+..+++.-.++.|..||--+=|.=++.-+.++ |..++++++.
T Consensus 467 fDVvLiDTAGR~~~--------~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 467 FDVVLIDTAGRMHN--------NAPLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred CCEEEEeccccccC--------ChhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 99999998864332 233455666677766778888899888777666554432 4457777664
No 321
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=32.28 E-value=1.3e+02 Score=27.03 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=30.7
Q ss_pred HHHHHHHHHHh--ccccEEEEEE------chhHHHHHHHHHhcccccceeeeecc
Q 042555 103 ARCVMRLMEVF--CVKRMSLVGI------SYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 103 ~~~~~~~l~~l--~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
++++...++.+ ..++++++|| |.|+.+++..-+..-.+ .+-+.++|
T Consensus 323 aRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 323 ARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 44554444443 3589999999 78999988776655444 55666664
No 322
>PF15566 Imm18: Immunity protein 18
Probab=31.55 E-value=62 Score=18.10 Aligned_cols=30 Identities=17% Similarity=0.088 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhccccEEEEEEchhHH
Q 042555 99 ESFQARCVMRLMEVFCVKRMSLVGISYGGF 128 (322)
Q Consensus 99 ~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~ 128 (322)
+..+++++..+......+.++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceecccccccc
Confidence 445566677776666678899999999986
No 323
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=31.50 E-value=1.3e+02 Score=24.20 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhccc---cEEEEEEchhHHHHHHHHHhcccccceeeeec
Q 042555 100 SFQARCVMRLMEVFCVK---RMSLVGISYGGFVGYSLAAQFPKVLEKVVLCC 148 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~~~---~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~ 148 (322)
+....-+..+++.++.+ ++-=+|..||+.+. .+|.++..+|.|+.+..
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~~-~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLAI-YAAEEYGVTVVGVTLSE 105 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHHH-HHHHHcCCEEEEeeCCH
Confidence 33456677777877653 35559999998654 46677766777776654
No 324
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=30.82 E-value=2.2e+02 Score=24.66 Aligned_cols=64 Identities=14% Similarity=0.106 Sum_probs=42.6
Q ss_pred CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhccc--ccceeeee
Q 042555 76 RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPK--VLEKVVLC 147 (322)
Q Consensus 76 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lil~ 147 (322)
.|.++.+|-+|.-. .-+.+.+.+..+.+......+++|--++-|.-+...|..+.+ .+.++|+-
T Consensus 182 ~~DvViIDTaGr~~--------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHK--------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCc--------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 48999999987422 224455666666666666778888878777777766666533 36677664
No 325
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=30.58 E-value=72 Score=23.59 Aligned_cols=32 Identities=22% Similarity=0.145 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
....+.-.+..++.+.++++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 34566667778999999999999888776654
No 326
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=30.46 E-value=1.1e+02 Score=17.76 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 268 ESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 268 ~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
|+. .+.+-++.++...|.++++.+.+.+|-++
T Consensus 26 PDT-vItL~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 26 PDT-VITLTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred CCe-EEEEeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 564 44444657788889999999999999765
No 327
>PRK04148 hypothetical protein; Provisional
Probab=29.87 E-value=1e+02 Score=21.52 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=17.4
Q ss_pred ccEEEEEEchhHHHHHHHHHh
Q 042555 116 KRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.++..+|...|..+|..++..
T Consensus 18 ~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHC
Confidence 569999999988888888754
No 328
>PLN02748 tRNA dimethylallyltransferase
Probab=29.78 E-value=3.6e+02 Score=23.74 Aligned_cols=74 Identities=11% Similarity=0.025 Sum_probs=43.7
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeec----CCCC--CCCC-----------------CCCCCCCHHH
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPD----LVFF--GESY-----------------TTRADRTESF 101 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d----~~G~--G~s~-----------------~~~~~~~~~~ 101 (322)
+..+.+|+|-|-.++... .++..|++. ..++..| |+|. |... .+...++..+
T Consensus 19 ~~~~~~i~i~GptgsGKs---~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS---KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCCEEEEECCCCCCHH---HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 345567888886666532 344445544 4577777 2332 1111 1235688999
Q ss_pred HHHHHHHHHHHhc--cccEEEEEE
Q 042555 102 QARCVMRLMEVFC--VKRMSLVGI 123 (322)
Q Consensus 102 ~~~~~~~~l~~l~--~~~~~lvGh 123 (322)
+.++....|+.+. .+-.+|||-
T Consensus 96 F~~~A~~~I~~I~~rgk~PIlVGG 119 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGLPVIVGG 119 (468)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcC
Confidence 9999999988762 234566663
No 329
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=29.44 E-value=2.2e+02 Score=20.45 Aligned_cols=55 Identities=15% Similarity=-0.041 Sum_probs=34.8
Q ss_pred HHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHH
Q 042555 67 GEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGY 131 (322)
Q Consensus 67 ~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~ 131 (322)
..+...+. .-.+++.|-+|- ..+-.++++.+..+.+. +.+-+.++|-+.|=.-.+
T Consensus 57 ~~il~~~~-~~~~i~LDe~Gk--------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~v 111 (153)
T TIGR00246 57 DRILAAIG-KAHVVTLDIPGK--------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPTC 111 (153)
T ss_pred HHHHHhCC-CCeEEEEcCCCC--------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHHH
Confidence 34555565 356899998863 45667777777776433 323456888888754443
No 330
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=29.33 E-value=2.5e+02 Score=21.09 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=44.8
Q ss_pred HhhhcC-CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcc--cccceeee
Q 042555 70 LRHFTP-RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP--KVLEKVVL 146 (322)
Q Consensus 70 ~~~l~~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lil 146 (322)
.+.+.. ++.++.+|-+|... ...+..+.+..+++......++++=-+..+.-.+..+..+- -.+.++|+
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~--------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIl 147 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSP--------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLIL 147 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSS--------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEE
T ss_pred HHHHhhcCCCEEEEecCCcch--------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEE
Confidence 333433 38999999987532 33556788888888887677777666666665555444432 24788886
Q ss_pred e
Q 042555 147 C 147 (322)
Q Consensus 147 ~ 147 (322)
-
T Consensus 148 T 148 (196)
T PF00448_consen 148 T 148 (196)
T ss_dssp E
T ss_pred E
Confidence 5
No 331
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=29.31 E-value=1.5e+02 Score=21.02 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 99 ESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 99 ~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
.......+.-.+..++.+.++++||+-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 345566677778888999999999998888775443
No 332
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.27 E-value=86 Score=21.19 Aligned_cols=31 Identities=23% Similarity=0.141 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHhccccEEEEEEchhHHHHH
Q 042555 101 FQARCVMRLMEVFCVKRMSLVGISYGGFVGY 131 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~ 131 (322)
.....+.-.+..++.+.++++||+--|.+..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3456666777888999999999976665543
No 333
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=29.25 E-value=1.2e+02 Score=24.13 Aligned_cols=70 Identities=11% Similarity=0.028 Sum_probs=43.6
Q ss_pred CCCCeEEEEcCCCCchh-hcHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhc-cccEEEEE
Q 042555 47 ILKPNLLLLHGFGANAM-WQYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQA-RCVMRLMEVFC-VKRMSLVG 122 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~-~~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-~~~~~~l~~l~-~~~~~lvG 122 (322)
+..|+||++.|+.+++. ..-..+...|... ++|.++.-| +.++.. .-+-.+-.++. ...+.|+=
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P------------t~eE~~~p~lWRfw~~lP~~G~i~IF~ 120 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP------------SAEELDHDFLWRIHKALPERGEIGIFN 120 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcCchHHHHHHhCCCCCeEEEEc
Confidence 45689999999876553 2467788888877 999998655 222222 23445555552 35666665
Q ss_pred EchhHH
Q 042555 123 ISYGGF 128 (322)
Q Consensus 123 hS~Gg~ 128 (322)
-||=+-
T Consensus 121 RSWY~~ 126 (264)
T TIGR03709 121 RSHYED 126 (264)
T ss_pred Cccccc
Confidence 555433
No 334
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=29.20 E-value=2.7e+02 Score=21.94 Aligned_cols=52 Identities=25% Similarity=0.374 Sum_probs=33.0
Q ss_pred EEEEeCCCCCCChHHHHHHHHHhc-CCcEEEEEcCCCccccccChHHHHHHHHHHHhc
Q 042555 244 LIIWGEQDQIFPLELGHRLKRHIG-ESARLVIIENTGHAVNLEKPKELLKHLKSFLIV 300 (322)
Q Consensus 244 l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 300 (322)
++|.|..|........+++.+..+ ++.++.++|.++. .|+...+...+.+.+
T Consensus 2 ~~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~-----~~~~~~~~~~~~~~~ 54 (250)
T TIGR02069 2 VIIGGAEDKVGDREILREFVSRAGGEDAIIVIITSASE-----EPREVGERYITIFSR 54 (250)
T ss_pred eEEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCC-----ChHHHHHHHHHHHHH
Confidence 567777777666666777766663 4568889988764 344444555554443
No 335
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.08 E-value=54 Score=27.21 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=16.1
Q ss_pred EEEEEchhHHHHHHHHHh
Q 042555 119 SLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~ 136 (322)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 589999999999999864
No 336
>PLN03006 carbonate dehydratase
Probab=27.89 E-value=79 Score=25.57 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
....+.-.+.+|+.+.|+++|||-=|.+...+
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 34567777888999999999999877766433
No 337
>PRK14974 cell division protein FtsY; Provisional
Probab=27.72 E-value=3.6e+02 Score=22.46 Aligned_cols=64 Identities=17% Similarity=0.123 Sum_probs=42.5
Q ss_pred CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcc--cccceeeee
Q 042555 76 RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFP--KVLEKVVLC 147 (322)
Q Consensus 76 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lil~ 147 (322)
++.++.+|-+|... +...+.+.+..+.+......+++|.-+.-|.-+..-+..+. -.+.++|+-
T Consensus 222 ~~DvVLIDTaGr~~--------~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 222 GIDVVLIDTAGRMH--------TDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCEEEEECCCccC--------CcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 37899999886543 22445666666666666677778877777776676665543 246777765
No 338
>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]
Probab=27.38 E-value=2.7e+02 Score=22.95 Aligned_cols=21 Identities=29% Similarity=0.320 Sum_probs=15.8
Q ss_pred HhhhcCC--ceEEeecCCCCCCC
Q 042555 70 LRHFTPR--FNVYVPDLVFFGES 90 (322)
Q Consensus 70 ~~~l~~~--~~v~~~d~~G~G~s 90 (322)
...|.++ --++.+|+.|++.|
T Consensus 142 i~~lp~~qe~~~~L~D~~~fs~s 164 (324)
T KOG1470|consen 142 ILFLPPGQEQFVWLFDLTGFSMS 164 (324)
T ss_pred HHhCCCCcceEEEEEecccCccc
Confidence 3445555 57899999999888
No 339
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.38 E-value=56 Score=23.81 Aligned_cols=22 Identities=23% Similarity=0.240 Sum_probs=16.9
Q ss_pred ccEEEEEEchhHHHHHHHHHhc
Q 042555 116 KRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 116 ~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
..-.+.|-|.||.+|+.++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 3347999999999998887763
No 340
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=26.46 E-value=1.7e+02 Score=18.67 Aligned_cols=33 Identities=27% Similarity=0.240 Sum_probs=19.5
Q ss_pred CceEEEEEeCCceEEEEEecCCCCCCCCeEEEEcCCCC
Q 042555 23 GLRSTSTDLGDGTVMQCWVPKFPKILKPNLLLLHGFGA 60 (322)
Q Consensus 23 ~~~~~~i~~~~g~~l~~~~~~~~~~~~~~vv~~hG~~~ 60 (322)
++-+..+.+.++.++-|... .+..+|++||+-=
T Consensus 46 ~~~ElR~r~g~~yRiif~~~-----~~~~vvll~gf~K 78 (95)
T TIGR02683 46 GVSELRIDFGPGYRVYFTQR-----GKVIILLLCGGDK 78 (95)
T ss_pred CcEEEEecCCCCEEEEEEEE-----CCEEEEEEeCEec
Confidence 44455556544666655554 3347889998643
No 341
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=26.22 E-value=92 Score=25.30 Aligned_cols=33 Identities=6% Similarity=-0.072 Sum_probs=22.6
Q ss_pred HHHHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 104 RCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 104 ~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
+.+.++++.+.....-++|-|||+++++.+..-
T Consensus 122 ~El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 122 DELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 335555555443356789999999999877654
No 342
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=25.93 E-value=3e+02 Score=20.93 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=32.6
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCC
Q 042555 240 AQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENT 278 (322)
Q Consensus 240 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (322)
..|++++.|..+...+.+..+.+.+.+ .+.=++.++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl-~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYL-ENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHH-HcCCEEEEECC
Confidence 569999999999988899999999999 66777777765
No 343
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.78 E-value=62 Score=26.01 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=16.9
Q ss_pred EEEEEchhHHHHHHHHHhc
Q 042555 119 SLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~~ 137 (322)
.+.|-|.||.+|..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999999998754
No 344
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=25.37 E-value=2.7e+02 Score=23.00 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhccccEEEEEEchh--HHHHHHHHHhcccccceeeeeccC
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYG--GFVGYSLAAQFPKVLEKVVLCCSG 150 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~G--g~~a~~~a~~~p~~v~~lil~~~~ 150 (322)
...+..++..+...+++|+|-|-= =.+-..++..+|++|.++.+=+..
T Consensus 265 ~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 265 GQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred ccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 345566777888899999998833 235556678899999998776654
No 345
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=25.16 E-value=3.1e+02 Score=22.57 Aligned_cols=53 Identities=13% Similarity=0.053 Sum_probs=38.0
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhH-HHHHHHHHhc
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGG-FVGYSLAAQF 137 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg-~~a~~~a~~~ 137 (322)
-.|+..|.+. ..++.+.+++.+.++++..+...++++|+|.=| -++-++|.+.
T Consensus 50 d~V~~~~~~~--------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 50 NHVWKLSGKP--------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred CEEEEecCcc--------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 4677777541 237778889999999888765468888887644 4777777764
No 346
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=24.67 E-value=1.1e+02 Score=25.79 Aligned_cols=18 Identities=17% Similarity=0.289 Sum_probs=16.3
Q ss_pred EEEEEchhHHHHHHHHHh
Q 042555 119 SLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~ 136 (322)
.++|-|.|+.++..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 599999999999999876
No 347
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=24.30 E-value=1.7e+02 Score=22.75 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCCCchhh-cHHHHHhhhcCC-ceEEeecCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhc-cccEEEEEE
Q 042555 48 LKPNLLLLHGFGANAMW-QYGEFLRHFTPR-FNVYVPDLVFFGESYTTRADRTESFQA-RCVMRLMEVFC-VKRMSLVGI 123 (322)
Q Consensus 48 ~~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~-~~~~~~l~~l~-~~~~~lvGh 123 (322)
+.|+||++.|+.+++.. .-..+...|... +.|.++..| +.++.. .-+..+-..+. ...+.|+=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p------------t~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP------------SDRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC------------CHHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 45899999998765532 466788888887 899988765 222322 23455556653 356777766
Q ss_pred chhHHH
Q 042555 124 SYGGFV 129 (322)
Q Consensus 124 S~Gg~~ 129 (322)
||=+-+
T Consensus 97 SwY~~~ 102 (230)
T TIGR03707 97 SWYNRA 102 (230)
T ss_pred chhhhH
Confidence 665543
No 348
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.24 E-value=86 Score=24.83 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=24.1
Q ss_pred ccE-EEEEEchhHHHHHHHHHhcccccceeee
Q 042555 116 KRM-SLVGISYGGFVGYSLAAQFPKVLEKVVL 146 (322)
Q Consensus 116 ~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~lil 146 (322)
.++ .++|.|+|+.-+..+.++.+.+-++++.
T Consensus 39 ~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 39 NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 344 4799999999999999988876555543
No 349
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.13 E-value=3.5e+02 Score=21.57 Aligned_cols=71 Identities=18% Similarity=0.127 Sum_probs=42.5
Q ss_pred CCeEEEEcCCCCchhhcHHHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchh
Q 042555 49 KPNLLLLHGFGANAMWQYGEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYG 126 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~~~~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~G 126 (322)
-|.+++.--.+--. +..+.+.+.+++. -.++.+|+| .+..+++....+..+++.+.++.=+..
T Consensus 95 ~Pivlm~Y~Npi~~-~Gie~F~~~~~~~GvdGlivpDLP--------------~ee~~~~~~~~~~~gi~~I~lvaPtt~ 159 (265)
T COG0159 95 VPIVLMTYYNPIFN-YGIEKFLRRAKEAGVDGLLVPDLP--------------PEESDELLKAAEKHGIDPIFLVAPTTP 159 (265)
T ss_pred CCEEEEEeccHHHH-hhHHHHHHHHHHcCCCEEEeCCCC--------------hHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 34444443333222 2345566666665 788999987 344667777777888888877766555
Q ss_pred HHHHHHHH
Q 042555 127 GFVGYSLA 134 (322)
Q Consensus 127 g~~a~~~a 134 (322)
--..-..+
T Consensus 160 ~~rl~~i~ 167 (265)
T COG0159 160 DERLKKIA 167 (265)
T ss_pred HHHHHHHH
Confidence 44433333
No 350
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=24.11 E-value=2e+02 Score=22.08 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=27.5
Q ss_pred ccccEEEEEEchh----HHHHHHHHHhcccccceeeeeccCCCCC
Q 042555 114 CVKRMSLVGISYG----GFVGYSLAAQFPKVLEKVVLCCSGVCLE 154 (322)
Q Consensus 114 ~~~~~~lvGhS~G----g~~a~~~a~~~p~~v~~lil~~~~~~~~ 154 (322)
..+++.++||.|| +..+.++...| .|+.+|-+++.....
T Consensus 54 KGk~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvGt~Gal~ 96 (236)
T COG0813 54 KGKKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVGTCGALS 96 (236)
T ss_pred cCcEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEEcccccc
Confidence 4588999999999 44455555555 388888887766554
No 351
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.96 E-value=1.3e+02 Score=21.19 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhccccEEEEEEchhHHHH
Q 042555 101 FQARCVMRLMEVFCVKRMSLVGISYGGFVG 130 (322)
Q Consensus 101 ~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a 130 (322)
+....+.-.+..++.+.++++||+-=|.+.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 345666677788899999999998655543
No 352
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=23.82 E-value=2.4e+02 Score=26.10 Aligned_cols=42 Identities=5% Similarity=-0.109 Sum_probs=28.8
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEE
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGI 123 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGh 123 (322)
+..-.+..||||++. +++++.++.+.+...++..-+|.++|+
T Consensus 630 ~kte~isCPgCGRT~-----~dlq~~~~~I~~~~~hl~GvkiavMGC 671 (733)
T PLN02925 630 TKTEYVSCPSCGRTL-----FDLQEVSAEIREKTSHLPGVSIAIMGC 671 (733)
T ss_pred cCCeEEECCCCCCcc-----ccHHHHHHHHHHHhhcCCCceEEEEee
Confidence 445555667777763 457778888888777775557777774
No 353
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=23.75 E-value=3.6e+02 Score=21.17 Aligned_cols=58 Identities=16% Similarity=0.088 Sum_probs=37.2
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcCCCccccc-----cChHHHHHHHHHHHhcc
Q 042555 241 QQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIENTGHAVNL-----EKPKELLKHLKSFLIVD 301 (322)
Q Consensus 241 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl~~~ 301 (322)
.|++++||--+.. .....+.+.+.+..+++.++--||.-.. ...+.+++.+.++++..
T Consensus 26 ~plvllHG~~~~~---~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l 88 (276)
T TIGR02240 26 TPLLIFNGIGANL---ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL 88 (276)
T ss_pred CcEEEEeCCCcch---HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh
Confidence 5899999965433 3345555666456788888767776432 12456777777777654
No 354
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.70 E-value=1.4e+02 Score=24.31 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhc----cccEEEEEEc--hhHHHHHHHHHh
Q 042555 103 ARCVMRLMEVFC----VKRMSLVGIS--YGGFVGYSLAAQ 136 (322)
Q Consensus 103 ~~~~~~~l~~l~----~~~~~lvGhS--~Gg~~a~~~a~~ 136 (322)
+..+.+++++.+ .+++.++|.| +|.-++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 566777777764 4789999997 899999988765
No 355
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.56 E-value=79 Score=26.20 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=14.9
Q ss_pred EEEEEchhHHHHHHHHHh
Q 042555 119 SLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~~ 136 (322)
.++|||+|=+.|+.++..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999888887753
No 356
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=23.48 E-value=2.2e+02 Score=21.16 Aligned_cols=14 Identities=21% Similarity=-0.002 Sum_probs=10.4
Q ss_pred EEeecCCCCCCCCCC
Q 042555 79 VYVPDLVFFGESYTT 93 (322)
Q Consensus 79 v~~~d~~G~G~s~~~ 93 (322)
+|++| ||||..++-
T Consensus 2 ~I~iD-pGHGg~d~G 15 (189)
T TIGR02883 2 IIVID-PGHGGIDGG 15 (189)
T ss_pred EEEEe-CCCCCCCCC
Confidence 57777 799987644
No 357
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=23.46 E-value=78 Score=24.47 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCCchhh-cHHHHHhhhcCC-ceEEeecCC
Q 042555 49 KPNLLLLHGFGANAMW-QYGEFLRHFTPR-FNVYVPDLV 85 (322)
Q Consensus 49 ~~~vv~~hG~~~~~~~-~~~~~~~~l~~~-~~v~~~d~~ 85 (322)
.|+||++.|+.+++.. .-..+...|... ++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4689999999776632 356677777777 999999866
No 358
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.38 E-value=4.6e+02 Score=22.51 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=41.0
Q ss_pred hcCC-ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccc--cceeeee
Q 042555 73 FTPR-FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKV--LEKVVLC 147 (322)
Q Consensus 73 l~~~-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lil~ 147 (322)
+.+. |.+|.+|--|.- .....+-+.+.++.+.+.++.+++|=-+.=|..|...|..+.+. |.++|+-
T Consensus 179 fKke~fdvIIvDTSGRh--------~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg~vIlT 248 (483)
T KOG0780|consen 179 FKKENFDVIIVDTSGRH--------KQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARAFKETVDVGAVILT 248 (483)
T ss_pred HHhcCCcEEEEeCCCch--------hhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHHHHHhhccceEEEE
Confidence 3344 888888876532 23345667777777777777777666666666666666555432 4455543
No 359
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=23.32 E-value=1.3e+02 Score=24.36 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=26.3
Q ss_pred cEEEEEEchhHHHHHHHHHhcc----------------cccceeeeeccCCC
Q 042555 117 RMSLVGISYGGFVGYSLAAQFP----------------KVLEKVVLCCSGVC 152 (322)
Q Consensus 117 ~~~lvGhS~Gg~~a~~~a~~~p----------------~~v~~lil~~~~~~ 152 (322)
+++|+|+|-||.+.-.+..... .+|+.+-.++++..
T Consensus 194 ~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 194 PLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred ceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 6899999999998877765432 24677777776654
No 360
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=23.20 E-value=4.8e+02 Score=22.48 Aligned_cols=97 Identities=19% Similarity=0.073 Sum_probs=52.1
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcC-CceEEeecCCCCCCCCCC---C---CCCCHHHHHHHHHHHHHHhccccEEEEEE
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTP-RFNVYVPDLVFFGESYTT---R---ADRTESFQARCVMRLMEVFCVKRMSLVGI 123 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~---~---~~~~~~~~~~~~~~~l~~l~~~~~~lvGh 123 (322)
+|+++--..+..+..|.. .+.+.+ +.-|+-.|..++=.--.. . ....++.+.+++......-....-+|.|-
T Consensus 50 ~villSd~~G~~d~~~s~-a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~ 128 (456)
T COG3946 50 LVILLSDEAGIGDQERSR-ADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGP 128 (456)
T ss_pred eeEEEEcccChhhhhcch-hHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeec
Confidence 455554333333222433 344444 488888887765222111 1 12344555555444433323345578889
Q ss_pred chhHHHHHHHHHhccc-ccceeeeec
Q 042555 124 SYGGFVGYSLAAQFPK-VLEKVVLCC 148 (322)
Q Consensus 124 S~Gg~~a~~~a~~~p~-~v~~lil~~ 148 (322)
--||.++...+.+.|+ .+.+.+.+.
T Consensus 129 g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 129 GQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred CCCcHHHHHHHhhChhhhhcCccCCC
Confidence 9999999999988765 344444444
No 361
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=23.15 E-value=1e+02 Score=28.75 Aligned_cols=22 Identities=36% Similarity=0.385 Sum_probs=18.0
Q ss_pred ccccEEEEEEchhHHHHHHHHH
Q 042555 114 CVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 114 ~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
+..--+|.|.|.||.++..+|.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 4444579999999999999986
No 362
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=22.74 E-value=3e+02 Score=23.54 Aligned_cols=50 Identities=8% Similarity=-0.004 Sum_probs=27.5
Q ss_pred CceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEEchh
Q 042555 76 RFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGISYG 126 (322)
Q Consensus 76 ~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~G 126 (322)
.|.||.+|.|.+++|.... ..-..++.+-+...++-+...-+.++--|.+
T Consensus 290 ~fDlIilDPPsF~r~k~~~-~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~ 339 (393)
T COG1092 290 KFDLIILDPPSFARSKKQE-FSAQRDYKDLNDLALRLLAPGGTLVTSSCSR 339 (393)
T ss_pred cccEEEECCcccccCcccc-hhHHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 4999999999999986543 1122233333333344444444444443333
No 363
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=22.44 E-value=4.1e+02 Score=21.29 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=59.9
Q ss_pred CCCCeEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---ccccEEEEEE
Q 042555 47 ILKPNLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVF---CVKRMSLVGI 123 (322)
Q Consensus 47 ~~~~~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~lvGh 123 (322)
...|..||=-|.||-+ . ++.+.+.|....-+|..|-.++- -...+.+...+...++++.+ + -++.+++.
T Consensus 4 ~~~~IgvFDSGVGGLs-V-lrei~~~LP~e~~iY~~D~a~~P-----YG~ks~e~I~~~~~~i~~~l~~~~-ik~lVIAC 75 (269)
T COG0796 4 PQPPIGVFDSGVGGLS-V-LREIRRQLPDEDIIYVGDTARFP-----YGEKSEEEIRERTLEIVDFLLERG-IKALVIAC 75 (269)
T ss_pred cCCeEEEEECCCCcHH-H-HHHHHHHCCCCcEEEEecCCCCC-----CCCCCHHHHHHHHHHHHHHHHHcC-CCEEEEec
Confidence 3455667778888887 4 89999999888888888876542 22345555555555555544 4 56778888
Q ss_pred chhHHHHHHHHHhc-ccccceee
Q 042555 124 SYGGFVGYSLAAQF-PKVLEKVV 145 (322)
Q Consensus 124 S~Gg~~a~~~a~~~-p~~v~~li 145 (322)
=.-..+|+....+. +-.|-++|
T Consensus 76 NTASa~al~~LR~~~~iPVvGvi 98 (269)
T COG0796 76 NTASAVALEDLREKFDIPVVGVI 98 (269)
T ss_pred chHHHHHHHHHHHhCCCCEEEec
Confidence 77777777776653 22244444
No 364
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=22.42 E-value=83 Score=34.23 Aligned_cols=30 Identities=20% Similarity=0.209 Sum_probs=23.9
Q ss_pred HHHHHHHhccccEEEEEEchhHHHHHHHHH
Q 042555 106 VMRLMEVFCVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 106 ~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
+.++++.+|+++-.++|||+|=+.|+.+|.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 345567778899999999999988887764
No 365
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=22.32 E-value=1.8e+02 Score=21.66 Aligned_cols=61 Identities=13% Similarity=0.142 Sum_probs=36.1
Q ss_pred CCCCCeEEEEcCCCCchhhcH-HHHHhhhcCC-ceEEeecCCC--CCCCCCCCCCCCHHHHHHHHHH
Q 042555 46 KILKPNLLLLHGFGANAMWQY-GEFLRHFTPR-FNVYVPDLVF--FGESYTTRADRTESFQARCVMR 108 (322)
Q Consensus 46 ~~~~~~vv~~hG~~~~~~~~~-~~~~~~l~~~-~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~~~~ 108 (322)
.+.++.+|++-|+.++..... ..+.+.|.+. ++++..|==. ||.+.. -.++.++-.+.+..
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d--LgFs~edR~eniRR 83 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD--LGFSREDRIENIRR 83 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC--CCCChHHHHHHHHH
Confidence 456678999999988765323 3344556555 9999998321 444432 23455554444433
No 366
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=21.90 E-value=45 Score=24.45 Aligned_cols=36 Identities=3% Similarity=-0.099 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHHHhc
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQF 137 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~ 137 (322)
+-+.+.++++.....-.-.+|-|||++.|+.++.-.
T Consensus 83 Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 83 YWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred hHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcCc
Confidence 444566666665434456889999999999887543
No 367
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=21.90 E-value=93 Score=23.61 Aligned_cols=36 Identities=22% Similarity=0.171 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhccccEEEEEEchhHHHHHHHHH
Q 042555 100 SFQARCVMRLMEVFCVKRMSLVGISYGGFVGYSLAA 135 (322)
Q Consensus 100 ~~~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~ 135 (322)
......+.-.+..++.+.|+++||+-=|.+...+..
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 445667777888999999999999988877765543
No 368
>PRK07877 hypothetical protein; Provisional
Probab=21.86 E-value=1.7e+02 Score=27.32 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=29.0
Q ss_pred HHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCC
Q 042555 111 EVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGV 151 (322)
Q Consensus 111 ~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~ 151 (322)
+.+...+|.|+|.+.|+.++..+|..- -+..+++++.-.
T Consensus 103 ~~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D~ 141 (722)
T PRK07877 103 ERLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFDT 141 (722)
T ss_pred HHHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCCE
Confidence 345567899999999999998888652 137888887643
No 369
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.79 E-value=1.3e+02 Score=22.48 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
....+.-.+..++.+.++++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 455666678889999999999998777666543
No 370
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=21.72 E-value=2e+02 Score=23.14 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=28.8
Q ss_pred ceEEeecCCCCCCCCCCCCCCCHHHHHH--------HHHHHHHHhccccEEEEEEch-hHHHHHHH
Q 042555 77 FNVYVPDLVFFGESYTTRADRTESFQAR--------CVMRLMEVFCVKRMSLVGISY-GGFVGYSL 133 (322)
Q Consensus 77 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~--------~~~~~l~~l~~~~~~lvGhS~-Gg~~a~~~ 133 (322)
-+++.+|..|-=..+...-......+++ ++.++++.. ++-+++|-|- ||.+.-..
T Consensus 60 ~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v--~ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 60 KKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAV--KPTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred CeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhc--CCCEEEEeCCCCCCCCHHH
Confidence 3899999998433322211111112222 344444443 6678999995 66554433
No 371
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=21.61 E-value=2e+02 Score=22.83 Aligned_cols=75 Identities=15% Similarity=0.031 Sum_probs=42.8
Q ss_pred eEEEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEE-EEEchh
Q 042555 51 NLLLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSL-VGISYG 126 (322)
Q Consensus 51 ~vv~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~l-vGhS~G 126 (322)
+++.=.|...-.+.....+.+.|-..-.++.|+.+--..=.......+.+++.+. ...+..++.+.+.+ -||+.|
T Consensus 107 VmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a-~~~i~~~g~~~VliKGGH~~~ 182 (263)
T COG0351 107 VMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEA-AKLLHELGAKAVLIKGGHLEG 182 (263)
T ss_pred eEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHH-HHHHHHhCCCEEEEcCCCCCC
Confidence 3333344433332234555667777788999998732111111123455554444 77888888888877 577777
No 372
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=21.58 E-value=2.2e+02 Score=17.88 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=25.8
Q ss_pred HHHHHHHHhccccEEEEEEchhHHHHHHHHHh
Q 042555 105 CVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQ 136 (322)
Q Consensus 105 ~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~ 136 (322)
.+..+-+.||.+.|.+.|.+....+|..+...
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 44445567899999999999999999887654
No 373
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=21.50 E-value=3.9e+02 Score=21.45 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=33.0
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHHHhcCCcEEEEEcC-CCcccc-ccChHHHHHHHHHH
Q 042555 238 KIAQQTLIIWGEQDQIFPLELGHRLKRHIGESARLVIIEN-TGHAVN-LEKPKELLKHLKSF 297 (322)
Q Consensus 238 ~i~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~-~~~~~~~~~~i~~f 297 (322)
...+||.++.|++ ...++..+.+ |+.+.+.++. -|++.- .-.|++..+.|.+=
T Consensus 145 ~~gVPV~lVsGDd------~~~~ea~~~~-P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~a 199 (270)
T cd08769 145 EFGVPVVLVAGDS------ELEKEVKEET-PWAVFVPTKESLSRYSAKSPSMKKVKEELREA 199 (270)
T ss_pred hcCCCEEEEecCH------HHHHHHHHhC-CCceEEEEeeecCCCccccCCHHHHHHHHHHH
Confidence 4589999999966 3455566666 8888888864 343332 23455544444433
No 374
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=21.43 E-value=1.4e+02 Score=21.81 Aligned_cols=72 Identities=26% Similarity=0.247 Sum_probs=43.6
Q ss_pred EEEcCCCCchhhcHHHHHhhhcCCceEEeecCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhccccEEEEEEchh
Q 042555 53 LLLHGFGANAMWQYGEFLRHFTPRFNVYVPDLVFFGESYTT------RADRTESFQARCVMRLMEVFCVKRMSLVGISYG 126 (322)
Q Consensus 53 v~~hG~~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~l~~l~~~~~~lvGhS~G 126 (322)
|++-|.|++.. +-..++..|..+|.--.+-+|.--.|... ..+|.++.. ....++.++..-=+++|.|..
T Consensus 44 vl~cGNGgSaa-dAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAA-DAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchh-hHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 44457777764 57778888877776666666655444222 234444442 334556666555678999988
Q ss_pred HH
Q 042555 127 GF 128 (322)
Q Consensus 127 g~ 128 (322)
|.
T Consensus 120 GN 121 (176)
T COG0279 120 GN 121 (176)
T ss_pred CC
Confidence 74
No 375
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=21.35 E-value=2.7e+02 Score=19.75 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=31.7
Q ss_pred HHHHHHHHhccccEEEEEEchhHHHHHHHHHhcccccceeeeeccCCC
Q 042555 105 CVMRLMEVFCVKRMSLVGISYGGFVGYSLAAQFPKVLEKVVLCCSGVC 152 (322)
Q Consensus 105 ~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lil~~~~~~ 152 (322)
++.++++..+.+.++++|-+....+...+......-.+-.++.+....
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 567778888999999999998766554443333333555555555443
No 376
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=20.99 E-value=2.5e+02 Score=18.21 Aligned_cols=54 Identities=7% Similarity=0.142 Sum_probs=27.5
Q ss_pred HHHHhhhcCC--ceEEeecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhccccEEEEEE
Q 042555 67 GEFLRHFTPR--FNVYVPDLVFFGESYTTRADRTESFQARCVMRLMEVFCVKRMSLVGI 123 (322)
Q Consensus 67 ~~~~~~l~~~--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~l~~l~~~~~~lvGh 123 (322)
...+..++.. -..++.++||. |+.....++.++..+....++..+. ++.+++|.
T Consensus 17 GkaiN~mad~GiTGFfl~eYrGv--sPd~wkgf~~~EDpE~aik~i~D~s-~~AVlI~t 72 (110)
T COG4075 17 GKAINIMADAGITGFFLHEYRGV--SPDKWKGFSKEEDPESAIKAIRDLS-DKAVLIGT 72 (110)
T ss_pred HHHHHHHHhcCcceEEEEEecCc--ChhHhcCcccccCHHHHHHHHHHhh-hceEEEEE
Confidence 3445555554 66788999865 3333334444433333444444443 44455553
No 377
>PRK15219 carbonic anhydrase; Provisional
Probab=20.86 E-value=79 Score=24.74 Aligned_cols=31 Identities=16% Similarity=0.042 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 103 ARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 103 ~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
...+.-.+..++.+.|+++|||-=|.+...+
T Consensus 130 ~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 130 LGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 4566677788899999999999877766654
No 378
>PRK09065 glutamine amidotransferase; Provisional
Probab=20.71 E-value=1.5e+02 Score=23.10 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSLA 134 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~a 134 (322)
+...+.++++..-...+=++|.|+|..+...+.
T Consensus 73 w~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 105 (237)
T PRK09065 73 WSERTADWLRQAAAAGMPLLGICYGHQLLAHAL 105 (237)
T ss_pred hHHHHHHHHHHHHHCCCCEEEEChhHHHHHHHc
Confidence 455556666554334566999999999877654
No 379
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.47 E-value=1.1e+02 Score=20.50 Aligned_cols=32 Identities=38% Similarity=0.517 Sum_probs=23.7
Q ss_pred cEEEEE-EchhHHHHHHHHHhcccccceeeeecc
Q 042555 117 RMSLVG-ISYGGFVGYSLAAQFPKVLEKVVLCCS 149 (322)
Q Consensus 117 ~~~lvG-hS~Gg~~a~~~a~~~p~~v~~lil~~~ 149 (322)
++.|+| ..+.|.-.+.+..++|+ +.-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578899 88888888888888885 555554443
No 380
>PLN02154 carbonic anhydrase
Probab=20.13 E-value=1.5e+02 Score=23.85 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhccccEEEEEEchhHHHHHHH
Q 042555 102 QARCVMRLMEVFCVKRMSLVGISYGGFVGYSL 133 (322)
Q Consensus 102 ~~~~~~~~l~~l~~~~~~lvGhS~Gg~~a~~~ 133 (322)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 34566677888899999999999777666654
No 381
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.01 E-value=71 Score=26.01 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=15.0
Q ss_pred EEEEEchhHHHHHHHHH
Q 042555 119 SLVGISYGGFVGYSLAA 135 (322)
Q Consensus 119 ~lvGhS~Gg~~a~~~a~ 135 (322)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 58999999999998864
Done!