Your job contains 1 sequence.
>042559
MDDALSVLLGVSTSTSASASASSSSSTTSMAKRLCSSSTSQNPNITAKLNPSMDNLLETL
LNLADSPPSLSIDVSFERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKRSARKRASHHNF
LAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVS
TMIHRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFIL
TRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQT
LMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIRIL
LKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARFLTAVLT
GDFKFLRHLDISNREGLASEGDWYDRCFNSRIIPLKEVSEERPDICVLAEFPSEGSFIDI
EQMVDSEFNSEISLPSQLSSRTSDDSLLMSCSESSYNSDHGSGNEEGQDSGYVIFEESSD
EVDFLAI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042559
(547 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1009023375 - symbol:AT4G02733 "AT4G02733" spec... 481 7.9e-46 1
TAIR|locus:2140225 - symbol:AT4G02740 species:3702 "Arabi... 478 1.6e-45 1
WB|WBGene00015350 - symbol:C02F5.7 species:6239 "Caenorha... 125 1.6e-07 3
UNIPROTKB|Q0VD31 - symbol:FBXL4 "F-box/LRR-repeat protein... 94 7.6e-05 2
UNIPROTKB|A6H779 - symbol:FBXL2 "F-box/LRR-repeat protein... 124 0.00015 1
UNIPROTKB|D2ST34 - symbol:FBXL4 "F-box and leucine-rich r... 87 0.00043 2
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 118 0.00071 1
MGI|MGI:2442569 - symbol:Fbxo48 "F-box protein 48" specie... 106 0.00085 1
UNIPROTKB|E2R1T6 - symbol:FBXL4 "Uncharacterized protein"... 84 0.00089 2
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 117 0.00091 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 117 0.00091 1
>TAIR|locus:1009023375 [details] [associations]
symbol:AT4G02733 "AT4G02733" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF81383
EMBL:AC002330 EMBL:AL161494 EMBL:AC004044 KO:K10268 EMBL:DQ487575
EMBL:EF182883 IPI:IPI00656804 RefSeq:NP_001031579.1
UniGene:At.63303 ProteinModelPortal:Q2V3L6 SMR:Q2V3L6
EnsemblPlants:AT4G02733.1 GeneID:3770467 KEGG:ath:AT4G02733
TAIR:At4g02733 eggNOG:NOG327419 HOGENOM:HOG000130013 OMA:NSISWFL
PhylomeDB:Q2V3L6 ProtClustDB:CLSN2681444 Genevestigator:Q2V3L6
Uniprot:Q2V3L6
Length = 301
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 120/296 (40%), Positives = 180/296 (60%)
Query: 39 TSQNPNITAKLNPSM-------DNLLETLLNLADSPPSLSIDVSFERLLDS--APGDED- 88
+++NPN ++ L+ S+ D+++ +L+ DSP SLSI SF+R+LD + GD
Sbjct: 3 STENPN-SSPLSDSLEFNERHLDSIISSLVTFPDSP-SLSISSSFDRVLDHLLSSGDVSV 60
Query: 89 QSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAAT 148
Q L+DR ++ SLLL+S KR ++KRA+ HN ++W LP +LT+KVFSM+DT+SL A+A
Sbjct: 61 QDQLVDRTLERFSLLLQSTKRCSQKRATLHNSISWFLPSELTVKVFSMVDTKSLMQASAC 120
Query: 149 CSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIHRAGKSLQSLKLGIVPGPTAS-PWS 207
C+MFN AMDPLCY +IDL V++ V+ T+++R+GK L+SLKLG V P S
Sbjct: 121 CTMFNNCAMDPLCYFHIDLTKAFKHVDDRVLRTLLNRSGKQLRSLKLGRVDAPGCLFRSS 180
Query: 208 CQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSCLNPLSGESGAAGSLLRRLHLYNI 267
C + N+ + D G S + TRSC +PL G+LL LH+Y++
Sbjct: 181 CLPPLILYGNNARRALKLGRDPP---GLGS-LFTRSCFDPLK----LTGNLLTSLHIYSL 232
Query: 268 ERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFESSKTGR 323
M+ S LSAC +L DL+IVG++V L L ++ +C L+E LF ++ G+
Sbjct: 233 GFMNMNSFLDPLSACSNLTDLKIVGVNVLLEPILELLARNCCLIEHLFLDNCSQGK 288
>TAIR|locus:2140225 [details] [associations]
symbol:AT4G02740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001810 PROSITE:PS50181
UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 GO:GO:0016567
EMBL:AL161495 EMBL:AC004044 KO:K10268 ProtClustDB:CLSN2681444
EMBL:AK175207 EMBL:AK228382 IPI:IPI00520192 PIR:H85034
RefSeq:NP_192183.2 UniGene:At.43357 ProteinModelPortal:Q0WRC9
SMR:Q0WRC9 IntAct:Q0WRC9 STRING:Q0WRC9 PaxDb:Q0WRC9
EnsemblPlants:AT4G02740.1 GeneID:828188 KEGG:ath:AT4G02740
TAIR:At4g02740 eggNOG:NOG239306 HOGENOM:HOG000006094 OMA:DLVNNCP
PhylomeDB:Q0WRC9 Genevestigator:Q0WRC9 Uniprot:Q0WRC9
Length = 479
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 129/357 (36%), Positives = 191/357 (53%)
Query: 128 DLTIKVFSML-DTQSLC-HAAATCSMFNKFAMDP-LCYANIDLRTVVPKVNNAVVSTMIH 184
D T+++ S+L D+ C A+ N +++ P L + + AV TM +
Sbjct: 67 DRTLELASLLLDSTRRCFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFN 126
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSV--DVSSFSWNDKKTRQGKESF--IL 240
+ ++ L + T++ ++ + +V T+ N ++ S G +S +L
Sbjct: 127 KC--AMDRLCYSHIDLTTSARYADKGVVSTMINRAGKELRSLKLGRVVRTAGSDSAAPLL 184
Query: 241 TRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQT 300
+ SCL+PL+ G GS LR L LYN+ + SL ALS CP++ DL IVGL+ +
Sbjct: 185 SGSCLSPLAYNHGFLGSRLRSLRLYNLRPIKYRSLCDALSVCPNITDLRIVGLYNLTEEL 244
Query: 301 LMSVSMSCPLLERLFFESSKTGRD-DSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIRI 359
S++ C L+E LF E+ R +S + V+FV NCPNLTS+ L F L D R
Sbjct: 245 FNSLTKKCRLIEHLFLETYGYPRTLESKAGSSLVEFVTNCPNLTSLTLIRFGLTDDWARN 304
Query: 360 LLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARFLTAVL 419
L + RKLKY++ S S +I G FLR LG NLL+ LILR C L+E EV F ++L
Sbjct: 305 LAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLILRSCPKLQEKEVLEFCNSLL 364
Query: 420 TGDFKFLRHLDISNREGLASEGDWYDRCFNSRIIPLKEVSEERPDICVLAEFPSEGS 476
TG+FK +R +D+S+ GLAS D RC N PL+ + EER D+ +A+FPS S
Sbjct: 365 TGNFKSIRQIDVSSNSGLASS-DRGKRC-NKPNFPLERLKEERSDVTFVADFPSTSS 419
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 83/150 (55%), Positives = 107/150 (71%)
Query: 54 DNLLETLLNLADSPPSLSIDVSFERLLD----SAPGDED-QSHLIDRAIKVSSLLLESAK 108
D ++ + L+ DS P +SI SF+R+LD SA DE Q L+DR ++++SLLL+S +
Sbjct: 23 DLIISSFLSFPDSSP-ISISNSFDRVLDRALASASADESVQDRLVDRTLELASLLLDSTR 81
Query: 109 RSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLR 168
R RKRAS HN +W LPP+LTIKVFSMLDT+S+ AA C+MFNK AMD LCY++IDL
Sbjct: 82 RCFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHIDLT 141
Query: 169 TVVPKVNNAVVSTMIHRAGKSLQSLKLGIV 198
T + VVSTMI+RAGK L+SLKLG V
Sbjct: 142 TSARYADKGVVSTMINRAGKELRSLKLGRV 171
>WB|WBGene00015350 [details] [associations]
symbol:C02F5.7 species:6239 "Caenorhabditis elegans"
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
GO:GO:0071688 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:FO080288 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 OMA:LTENVFG PIR:G88523 PIR:S44609
RefSeq:NP_741248.1 RefSeq:NP_741249.1 ProteinModelPortal:P34284
SMR:P34284 IntAct:P34284 MINT:MINT-227871 STRING:P34284
PaxDb:P34284 PRIDE:P34284 EnsemblMetazoa:C02F5.7b.1
EnsemblMetazoa:C02F5.7b.2 GeneID:3564805 KEGG:cel:CELE_C02F5.7
UCSC:C02F5.7a.1 CTD:3564805 WormBase:C02F5.7a WormBase:C02F5.7b
InParanoid:P34284 NextBio:954051 Uniprot:P34284
Length = 466
Score = 125 (49.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP ++ +KVFS LDT++LC +A C ++ A+D + +DL T V AVV +
Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLAR 119
Query: 185 RAGKSLQSLKL 195
R G L+ L L
Sbjct: 120 RCGGFLKELSL 130
Score = 74 (31.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 38/188 (20%), Positives = 76/188 (40%)
Query: 256 GSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLF 315
G L+ L L E + +++L S CP+L L + + ++ C L L
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLN 181
Query: 316 FESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK-LPDYKIRILLKGFRKLKYVDFST 374
E+ + D ++K + CPNL+ + + + D ++I+L + L +
Sbjct: 182 LENCSSITDRAMKY-----IGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILRG 236
Query: 375 SYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARFLTAVLTGDFKFLRHLD-ISN 433
+T ++ + G ++ L L C L ++ V ++ + + + IS+
Sbjct: 237 CEGLTENVFGSVEAHMGA--IKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISD 294
Query: 434 REGLASEG 441
R L S G
Sbjct: 295 RS-LVSLG 301
Score = 71 (30.1 bits), Expect = 3.2e-07, Sum P(3) = 3.2e-07
Identities = 46/214 (21%), Positives = 87/214 (40%)
Query: 207 SCQSL-VYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC--LNPLSGESGAAGSL-LRRL 262
+C+SL +R ++ + + G + C L ++ ++ A G+ L L
Sbjct: 225 NCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQNIANGATALEYL 284
Query: 263 HLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFESSKTG 322
+ N ++ + SL +L LE+ G + + ++ C LERL E
Sbjct: 285 CMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLI 344
Query: 323 RDDSLKSPTCVDFVNNCPNLTSMALRGFKL-PDYKIRILLKGFRK-LKYVDFSTSYSITG 380
D ++ S NNC L ++L +L D I+ L R+ L ++ +T
Sbjct: 345 SDHTINS-----LANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLTD 399
Query: 381 AFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARF 414
+ L +L L+ + L DC ++ + + RF
Sbjct: 400 STLSHLRHCKA---LKRIDLYDCQNVSKEAIVRF 430
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 31 AKRLCSSSTSQNPNITAKLN 50
AKRL + +P I AK N
Sbjct: 19 AKRLAQQAHKTHPVIQAKQN 38
>UNIPROTKB|Q0VD31 [details] [associations]
symbol:FBXL4 "F-box/LRR-repeat protein 4" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF81383
InterPro:IPR006553 SMART:SM00367 EMBL:BC119862 IPI:IPI00693507
RefSeq:NP_001069527.1 UniGene:Bt.21681 ProteinModelPortal:Q0VD31
PRIDE:Q0VD31 GeneID:535452 KEGG:bta:535452 CTD:26235
eggNOG:NOG287004 HOGENOM:HOG000006948 HOVERGEN:HBG051588
InParanoid:Q0VD31 KO:K10270 OrthoDB:EOG4XSKPD NextBio:20876754
Uniprot:Q0VD31
Length = 621
Score = 94 (38.1 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 68 PSLSIDVSFERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPP 127
P LS+ S L+D DED D ++ +L + + + R+ S+ F LP
Sbjct: 232 PMLSLKTS---LIDMNDLDEDDYEEKDDC-EIDNLNKKFSSTALREGPSNGYFDK--LPY 285
Query: 128 DLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNN 176
+L + + L LC A TC + N+ DPL Y +++L+ K+N+
Sbjct: 286 ELIQLILNHLTLPDLCRLAQTCKLLNQHCCDPLQYIHLNLQPYWAKLND 334
Score = 82 (33.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 40/155 (25%), Positives = 66/155 (42%)
Query: 256 GSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLF 315
GS L RL L ++ L + CP+L DL + Q ++ C L +RL
Sbjct: 374 GSELVRLELSCSHFLNETCLEIISEMCPNLQDLNLSSCDKLPPQAFSHIAKLCGL-KRLV 432
Query: 316 FESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRG-FKLPDYKIRILLKGFR--KLKYVDF 372
+K ++ + +N C +L ++L + DY + + G + KL+ +D
Sbjct: 433 LYRTK------VEQTALLSILNFCSDLQHLSLGSCVMIEDYDVTASMIGAKCKKLRTLDL 486
Query: 373 STSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLK 407
+IT + + L SG LLE L L C L+
Sbjct: 487 WRCKNITESGIAELASGCP--LLEELDLGWCPTLQ 519
Score = 81 (33.6 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 28/125 (22%), Positives = 59/125 (47%)
Query: 253 GAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQT---LMSVSMSCP 309
GA LR L L+ + + + ++ S CP L +L++ G L+ + ++ P
Sbjct: 475 GAKCKKLRTLDLWRCKNITESGIAELASGCPLLEELDL-GWCPTLQSSTGCFARLARQLP 533
Query: 310 LLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPD-YKIRILLKGFRKLK 368
L++LF ++++ D ++ + +NC L + + G ++ +R LL+ + L
Sbjct: 534 NLQKLFLTANRSVCDTDIE-----ELASNCTRLRQLDILGTRMVSPASLRKLLESCKDLS 588
Query: 369 YVDFS 373
+D S
Sbjct: 589 LLDVS 593
>UNIPROTKB|A6H779 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0016020 GO:GO:0006511
GO:GO:0004842 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245 KO:K10268
EMBL:BC146145 IPI:IPI00854546 RefSeq:NP_001092623.1
UniGene:Bt.54599 Ensembl:ENSBTAT00000005160 GeneID:616212
KEGG:bta:616212 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
InParanoid:A6H779 OMA:LTENVFG OrthoDB:EOG4KPTB9 NextBio:20900019
Uniprot:A6H779
Length = 423
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 71/327 (21%), Positives = 125/327 (38%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL V VV +
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISK 74
Query: 185 RAGKSLQSLKL-GIVPGPTAS----PWSCQSLVY-TIRNSVDVSSFSWNDKKTRQGKESF 238
R G L+ L L G + +S +C+++ + + ++ + K
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 239 ILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNAS---LSMALSACPSLLDLEIVGLHV 295
+ SC++ + R L N+ D + + + C L L + G
Sbjct: 135 LDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQ 194
Query: 296 ELRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPD 354
+ L + C L L +S DD + V CP L ++ L G L D
Sbjct: 195 LEDEALKHIQNYCHELVSLNLQSCSRVTDDGV-----VQLCRGCPRLQALCLSGCGSLTD 249
Query: 355 YKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARF 414
+ L +L+ ++ + +T A L LE + L +C+ + + R
Sbjct: 250 ASLTALALNCPRLQILEAARCSHLTDAGFTLLARNCHD--LEKMDLEECILITD----RT 303
Query: 415 LTAVLTGDFKFLRHLDISNREGLASEG 441
LT + K L+ L +S+ E + +G
Sbjct: 304 LTQLSIHCPK-LQALSLSHCELITDDG 329
>UNIPROTKB|D2ST34 [details] [associations]
symbol:FBXL4 "F-box and leucine-rich repeat protein 4"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367
CTD:26235 KO:K10270 OrthoDB:EOG4XSKPD OMA:EVISEMC
GeneTree:ENSGT00700000104313 EMBL:CU210878 EMBL:FJ719777
RefSeq:NP_001165223.1 UniGene:Ssc.19070 Ensembl:ENSSSCT00000004804
GeneID:100156082 KEGG:ssc:100156082 Uniprot:D2ST34
Length = 621
Score = 87 (35.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/109 (28%), Positives = 51/109 (46%)
Query: 68 PSLSIDVSFERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPP 127
P LS+ S L+D DED D + +L + + + R+ S+ F LP
Sbjct: 232 PLLSLKTS---LIDMNDLDEDDYEEKD-GCGMDNLNKKFSSIALREGPSNGYFDK--LPY 285
Query: 128 DLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNN 176
+L + + L LC A TC + N+ DPL Y +++L+ K+N+
Sbjct: 286 ELIQLILNHLTLPDLCRLAQTCKLLNQHCCDPLQYIHLNLQPYWAKLND 334
Score = 82 (33.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 29/125 (23%), Positives = 57/125 (45%)
Query: 253 GAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQT---LMSVSMSCP 309
GA LR L L+ + + ++ S CP L +L++ G L+ + ++ P
Sbjct: 475 GAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDL-GWCPTLQSSTGCFAKLARQLP 533
Query: 310 LLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPD-YKIRILLKGFRKLK 368
L++LF ++++ D ++ C NC L + + G ++ +R LL+ + L
Sbjct: 534 NLQKLFLTANRSVCDTDIEELAC-----NCTRLRQLDILGTRMVSPASLRKLLESCKDLS 588
Query: 369 YVDFS 373
+D S
Sbjct: 589 LLDVS 593
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 118 (46.6 bits), Expect = 0.00071, P = 0.00071
Identities = 64/328 (19%), Positives = 128/328 (39%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKL-GIVP-GPTAS---PWSCQSL-VYTIRNSVDVSSFSWNDKKTRQGKESF 238
R G L+ L L G + G A +C+++ V ++ + + K
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 239 ILTRSC--LNPLSGESGAAGS-LLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHV 295
+ SC + +S ++ + G LL +L++ +++ + + C L L + G
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQ 207
Query: 296 ELRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK-LPD 354
+ L + CP L L ++ D+ L + C L S+ G + D
Sbjct: 208 LEDEALKYIGAHCPELVTLNLQTCLQITDEGL-----ITICRGCHKLQSLCASGCSNITD 262
Query: 355 YKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARF 414
+ L + +L+ ++ + +T L + LE + L +C+ + + + +
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTDVGFTTLARNC--HELEKMDLEECVQITDSTLIQL 320
Query: 415 LTAVLTGDFKFLRHLDISNREGLASEGD 442
L H ++ +G+ G+
Sbjct: 321 SIHCPRLQVLSLSHCELITDDGIRHLGN 348
>MGI|MGI:2442569 [details] [associations]
symbol:Fbxo48 "F-box protein 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
MGI:MGI:2442569 SUPFAM:SSF81383 EMBL:AK037835 EMBL:AK041978
EMBL:AL645532 EMBL:BC125589 EMBL:BC125591 IPI:IPI00453725
RefSeq:NP_795956.1 UniGene:Mm.120672 UniGene:Mm.446582
ProteinModelPortal:Q8CAT8 SMR:Q8CAT8 PRIDE:Q8CAT8
Ensembl:ENSMUST00000061327 Ensembl:ENSMUST00000109635 GeneID:319701
KEGG:mmu:319701 UCSC:uc007ibt.1 CTD:554251 eggNOG:NOG47040
GeneTree:ENSGT00390000012248 HOGENOM:HOG000007150
HOVERGEN:HBG094843 InParanoid:Q8CAT8 OMA:SKVKHEW OrthoDB:EOG49ZXQG
NextBio:395234 Bgee:Q8CAT8 Genevestigator:Q8CAT8 Uniprot:Q8CAT8
Length = 161
Score = 106 (42.4 bits), Expect = 0.00085, P = 0.00085
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 98 KVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFN 153
K+ L SA K S NF+ LP ++T K+FS LD QSLC A+ TC+ +N
Sbjct: 12 KIPGTELNSADAERGKEESQRNFVEL-LPLEVTYKIFSQLDIQSLCRASRTCTGWN 66
>UNIPROTKB|E2R1T6 [details] [associations]
symbol:FBXL4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367
CTD:26235 KO:K10270 OMA:EVISEMC GeneTree:ENSGT00700000104313
EMBL:AAEX03008556 RefSeq:XP_868129.2 ProteinModelPortal:E2R1T6
Ensembl:ENSCAFT00000005576 GeneID:481932 KEGG:cfa:481932
NextBio:20856642 Uniprot:E2R1T6
Length = 621
Score = 84 (34.6 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 29/109 (26%), Positives = 51/109 (46%)
Query: 68 PSLSIDVSFERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPP 127
P LS+ S L+D ++D D + SL + + + R+ ++ F LP
Sbjct: 232 PVLSLQTS---LIDMNDLEDDDYEEKD-GCGMDSLSQKFSSTALREGPNNGYFDK--LPY 285
Query: 128 DLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNN 176
+L + + L LC A TC + N+ DPL Y +++L+ K+N+
Sbjct: 286 ELIQLILNHLTLPDLCRLAQTCKLLNQHCCDPLQYIHLNLQPYWAKLND 334
Score = 82 (33.9 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 29/125 (23%), Positives = 57/125 (45%)
Query: 253 GAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQT---LMSVSMSCP 309
GA LR L L+ + + ++ S CP L +L++ G L+ + ++ P
Sbjct: 475 GAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDL-GWCPTLQSSTGCFAKLARQLP 533
Query: 310 LLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPD-YKIRILLKGFRKLK 368
L++LF ++++ D ++ C NC L + + G ++ +R LL+ + L
Sbjct: 534 NLQKLFLTANRSVCDTDIEELAC-----NCTRLRQLDILGTRMVSPASLRKLLESCKDLS 588
Query: 369 YVDFS 373
+D S
Sbjct: 589 LLDVS 593
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 64/328 (19%), Positives = 127/328 (38%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKL-GIVP-GPTAS---PWSCQSL-VYTIRNSVDVSSFSWNDKKTRQGKESF 238
R G L+ L L G + G A +C+++ V + + + K
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 239 ILTRSC--LNPLSGESGAAGS-LLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHV 295
+ SC + +S ++ + G LL +L++ +++ + + C L L + G
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQ 207
Query: 296 ELRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK-LPD 354
+ L + CP L L ++ D+ L + C L S+ G + D
Sbjct: 208 LEDEALKYIGAHCPELVTLNLQTCLQITDEGL-----ITICRGCHKLQSLCASGCSNITD 262
Query: 355 YKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARF 414
+ L + +L+ ++ + +T L + LE + L +C+ + + + +
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTDVGFTTLARNC--HELEKMDLEECVQITDSTLIQL 320
Query: 415 LTAVLTGDFKFLRHLDISNREGLASEGD 442
L H ++ +G+ G+
Sbjct: 321 SIHCPRLQVLSLSHCELITDDGIRHLGN 348
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 117 (46.2 bits), Expect = 0.00091, P = 0.00091
Identities = 64/328 (19%), Positives = 127/328 (38%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKL-GIVP-GPTAS---PWSCQSL-VYTIRNSVDVSSFSWNDKKTRQGKESF 238
R G L+ L L G + G A +C+++ V + + + K
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 239 ILTRSC--LNPLSGESGAAGS-LLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHV 295
+ SC + +S ++ + G LL +L++ +++ + + C L L + G
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQ 207
Query: 296 ELRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK-LPD 354
+ L + CP L L ++ D+ L + C L S+ G + D
Sbjct: 208 LEDEALKYIGAHCPELVTLNLQTCLQITDEGL-----ITICRGCHKLQSLCASGCSNITD 262
Query: 355 YKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARF 414
+ L + +L+ ++ + +T L + LE + L +C+ + + + +
Sbjct: 263 AILNALGQNCPRLRILEVARCSQLTDVGFTTLARNC--HELEKMDLEECVQITDSTLIQL 320
Query: 415 LTAVLTGDFKFLRHLDISNREGLASEGD 442
L H ++ +G+ G+
Sbjct: 321 SIHCPRLQVLSLSHCELITDDGIRHLGN 348
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 547 529 0.00092 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 618 (66 KB)
Total size of DFA: 282 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.63u 0.09s 45.72t Elapsed: 00:00:02
Total cpu time: 45.63u 0.09s 45.72t Elapsed: 00:00:02
Start: Fri May 10 13:41:57 2013 End: Fri May 10 13:41:59 2013