BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042559
(547 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WRC9|SKI17_ARATH F-box protein SKIP17 OS=Arabidopsis thaliana GN=SKIP17 PE=1 SV=1
Length = 479
Score = 305 bits (782), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 191/429 (44%), Positives = 252/429 (58%), Gaps = 38/429 (8%)
Query: 54 DNLLETLLNLADSPPSLSIDVSFERLLD----SAPGDED-QSHLIDRAIKVSSLLLESAK 108
D ++ + L+ DS P +SI SF+R+LD SA DE Q L+DR ++++SLLL+S +
Sbjct: 23 DLIISSFLSFPDSSP-ISISNSFDRVLDRALASASADESVQDRLVDRTLELASLLLDSTR 81
Query: 109 RSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLR 168
R RKRAS HN +W LPP+LTIKVFSMLDT+S+ AA C+MFNK AMD LCY++IDL
Sbjct: 82 RCFRKRASVHNSNSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHIDLT 141
Query: 169 TVVPKVNNAVVSTMIHRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWND 228
T + VVSTMI+RAGK L+SLKLG V S +
Sbjct: 142 TSARYADKGVVSTMINRAGKELRSLKLGRVVRTAGSDSAAP------------------- 182
Query: 229 KKTRQGKESFILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDL 288
+L+ SCL+PL+ G GS LR L LYN+ + SL ALS CP++ DL
Sbjct: 183 ----------LLSGSCLSPLAYNHGFLGSRLRSLRLYNLRPIKYRSLCDALSVCPNITDL 232
Query: 289 EIVGLHVELRQTLMSVSMSCPLLERLFFESSKTGRD-DSLKSPTCVDFVNNCPNLTSMAL 347
IVGL+ + S++ C L+E LF E+ R +S + V+FV NCPNLTS+ L
Sbjct: 233 RIVGLYNLTEELFNSLTKKCRLIEHLFLETYGYPRTLESKAGSSLVEFVTNCPNLTSLTL 292
Query: 348 RGFKLPDYKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLK 407
F L D R L + RKLKY++ S S +I G FLR LG NLL+ LILR C L+
Sbjct: 293 IRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLILRSCPKLQ 352
Query: 408 EVEVARFLTAVLTGDFKFLRHLDISNREGLASEGDWYDRCFNSRIIPLKEVSEERPDICV 467
E EV F ++LTG+FK +R +D+S+ GLAS D RC N PL+ + EER D+
Sbjct: 353 EKEVLEFCNSLLTGNFKSIRQIDVSSNSGLAS-SDRGKRC-NKPNFPLERLKEERSDVTF 410
Query: 468 LAEFPSEGS 476
+A+FPS S
Sbjct: 411 VADFPSTSS 419
>sp|Q9SY03|FB219_ARATH F-box protein At4g02760 OS=Arabidopsis thaliana GN=At4g02760 PE=2
SV=2
Length = 506
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 195/459 (42%), Positives = 270/459 (58%), Gaps = 56/459 (12%)
Query: 32 KRLC----SSSTSQNP---NITAKLNPS-MDNLLETLLNLADSPP---SLSIDVSFERLL 80
KR C +S+ +NP I N S +D + + L+L+D P LSI SF+R+L
Sbjct: 7 KRPCLVPLGTSSIENPCSLPIAPDFNQSNIDLTISSFLSLSDLPLFSLPLSIGCSFDRVL 66
Query: 81 D----SAPG---DE-DQSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIK 132
D S G DE DQ +DR ++++SLL +S KR RKRA+ N +WPL P+LTIK
Sbjct: 67 DNVIPSIAGTSRDEFDQDRFLDRTLQLASLLYKSTKRCIRKRATLQNSTSWPLLPELTIK 126
Query: 133 VFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIHRAGKSLQS 192
VFSMLDT+SL A+A C+MFNK AMD +CY++IDL T V+N VV MIHRAGK L+S
Sbjct: 127 VFSMLDTKSLMQASACCTMFNKCAMDRVCYSHIDLTTAAEDVDNGVVCVMIHRAGKELRS 186
Query: 193 LKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSCLNPLSGES 252
LKLG + +A P + +LTRSCL PL+
Sbjct: 187 LKLGSISS-SAEPTTS------------------------------LLTRSCLTPLTFNH 215
Query: 253 GAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLE 312
G G LR LHLY++ +D SLS LSAC +L DL+IVGL L Q L ++ +C L+E
Sbjct: 216 GFTGGHLRSLHLYHLRMIDCGSLSPVLSACLNLTDLKIVGLDNPLEQ-LGLLTRNCRLIE 274
Query: 313 RLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIRILLKGFRKLKYVDF 372
LF E G + + ++F NCPNL+S++L GF L D ++ L+KGFR+LK+++
Sbjct: 275 HLFIE--IYGAAGLITDSSLLEFAANCPNLSSISLLGFLLNDAILQKLIKGFRRLKHINL 332
Query: 373 STSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVARFLTAVLTGDFKFLRHLDIS 432
S+S I+G F R L + LE LILRDC LKE EV FL ++L GDFK++R +D+S
Sbjct: 333 SSSPEISGCFFRGLELCGKDSPLETLILRDCYILKESEVLLFLNSLLAGDFKYIRLIDVS 392
Query: 433 NREGLASEGDWYDRCFNSRIIPLKEVSEERPDICVLAEF 471
N +GL +G +R F R P++E+ ++R ++ +A F
Sbjct: 393 NVDGLVCDGG--NRTFEPR-FPIEELKKQRSNVTFVAIF 428
>sp|Q2V3L6|FB343_ARATH F-box protein At4g02733 OS=Arabidopsis thaliana GN=At4g02733 PE=2
SV=1
Length = 301
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 152/256 (59%), Gaps = 20/256 (7%)
Query: 76 FERLLDSAPGDED---QSHLIDRAIKVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIK 132
F+R+LD D Q L+DR ++ SLLL+S KR ++KRA+ HN ++W LP +LT+K
Sbjct: 45 FDRVLDHLLSSGDVSVQDQLVDRTLERFSLLLQSTKRCSQKRATLHNSISWFLPSELTVK 104
Query: 133 VFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIHRAGKSLQS 192
VFSM+DT+SL A+A C+MFN AMDPLCY +IDL V++ V+ T+++R+GK L+S
Sbjct: 105 VFSMVDTKSLMQASACCTMFNNCAMDPLCYFHIDLTKAFKHVDDRVLRTLLNRSGKQLRS 164
Query: 193 LKLGIVPGPTA-SPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKE----SFILTRSCLNP 247
LKLG V P SC + N+ + + G++ + TRSC +P
Sbjct: 165 LKLGRVDAPGCLFRSSCLPPLILYGNNAR--------RALKLGRDPPGLGSLFTRSCFDP 216
Query: 248 LSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMS 307
L G+LL LH+Y++ M+ S LSAC +L DL+IVG++V L L ++ +
Sbjct: 217 LK----LTGNLLTSLHIYSLGFMNMNSFLDPLSACSNLTDLKIVGVNVLLEPILELLARN 272
Query: 308 CPLLERLFFESSKTGR 323
C L+E LF ++ G+
Sbjct: 273 CCLIEHLFLDNCSQGK 288
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 36/290 (12%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R G L+ L L G + ++ RN ++V S + K T S L++ C
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNAL--RTFAQNCRN-IEVLSLNGCTKTTDATCTS--LSKFC 142
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
S LR L L + + N SL CP L L I + + ++
Sbjct: 143 ------------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQAL 190
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALR-GFKLPDYKIRILLKG 363
C L+ LF + D++LK +CP L ++ L+ ++ D + + +G
Sbjct: 191 VRGCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICRG 245
Query: 364 FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVAR 413
KL+ + S +IT A L LG ++C L+ +EVAR
Sbjct: 246 CHKLQSLCASGCSNITDAILNALG-------------QNCPRLRILEVAR 282
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 36/290 (12%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R G L+ L L G + ++ RN ++V + + K T S L++ C
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNAL--RTFAQNCRN-IEVLNLNGCTKTTDATCTS--LSKFC 142
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
S LR L L + + N SL CP L L I + + ++
Sbjct: 143 ------------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQAL 190
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALR-GFKLPDYKIRILLKG 363
C L+ LF + D++LK +CP L ++ L+ ++ D + + +G
Sbjct: 191 VRGCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICRG 245
Query: 364 FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVAR 413
KL+ + S +IT A L LG ++C L+ +EVAR
Sbjct: 246 CHKLQSLCASGCSNITDAILNALG-------------QNCPRLRILEVAR 282
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 36/290 (12%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R G L+ L L G + ++ RN ++V + + K T S L++ C
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNAL--RTFAQNCRN-IEVLNLNGCTKTTDATCTS--LSKFC 142
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
S LR L L + + N SL CP L L I + + ++
Sbjct: 143 ------------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQAL 190
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALR-GFKLPDYKIRILLKG 363
C L+ LF + D++LK +CP L ++ L+ ++ D + + +G
Sbjct: 191 VRGCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICRG 245
Query: 364 FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKEVEVAR 413
KL+ + S +IT A L LG ++C L+ +EVAR
Sbjct: 246 CHKLQSLCASGCSNITDAILNALG-------------QNCPRLRILEVAR 282
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 23/266 (8%)
Query: 124 PLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LP +L +++FS LD +LC A +N A+D + IDL + VV +
Sbjct: 27 KLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENIS 86
Query: 184 HRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRS 243
R G L+ L L G + ++ RN ++V S + K T S L++
Sbjct: 87 KRCGGFLRKLSLRGCLGVGDNAL--RTFAQNCRN-IEVLSLNGCTKTTDATCTS--LSKF 141
Query: 244 CLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMS 303
C S LR L L + + N SL CP L L I + + +
Sbjct: 142 C------------SKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQA 189
Query: 304 VSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALR-GFKLPDYKIRILLK 362
+ C L+ LF + D++LK +CP L ++ L+ ++ D + + +
Sbjct: 190 LVRGCGGLKALFLKGCTQLEDEALKY-----IGAHCPELVTLNLQTCLQITDEGLITICR 244
Query: 363 GFRKLKYVDFSTSYSITGAFLRNLGS 388
G KL+ + S +IT A L LG
Sbjct: 245 GCHKLQSLCASGCSNITDAILNALGQ 270
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 25/286 (8%)
Query: 124 PLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LP +L +++FS LD +LC A +N A+D + +DL V VV +
Sbjct: 14 KLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNFQTDVEGRVVENIS 73
Query: 184 HRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRS 243
R G L+ L L G S SL +N ++ + N + L+R
Sbjct: 74 KRCGGFLRKLSLRGCIGVGDS-----SLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRF 128
Query: 244 CLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMS 303
C S L+ L L + + N+SL C +L L + ++ + +
Sbjct: 129 C------------SKLKHLDLTSCVSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEA 176
Query: 304 VSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPDYKIRILLK 362
+ C L+ L D++LK N+C L S+ L+ ++ D + + +
Sbjct: 177 LVRGCRGLKALLLRGCTQLEDEALK-----HIQNHCHELVSLNLQSCSRITDDGVVQICR 231
Query: 363 GFRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLKE 408
G +L+ + S ++T A L LG L+VL C HL +
Sbjct: 232 GCHRLQALCLSGCSNLTDASLTALGLNCPR--LQVLEAARCSHLTD 275
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 23/265 (8%)
Query: 124 PLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LP +L +++FS LD +LC A +N A+D + IDL V VV +
Sbjct: 14 KLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENIS 73
Query: 184 HRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRS 243
R G L+ L L G S SL +N ++ + N + L+R
Sbjct: 74 KRCGGFLRKLSLRGCIGVGDS-----SLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRF 128
Query: 244 CLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMS 303
C S L+ L L + + N+SL C +L L + + + +
Sbjct: 129 C------------SKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEA 176
Query: 304 VSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPDYKIRILLK 362
+ C L+ L D++LK N C L S+ L+ ++ D + + +
Sbjct: 177 LVRGCRGLKALLLRGCTQLEDEALKH-----IQNYCHELVSLNLQSCSRITDEGVVQICR 231
Query: 363 GFRKLKYVDFSTSYSITGAFLRNLG 387
G +L+ + S ++T A L LG
Sbjct: 232 GCHRLQALCLSGCSNLTDASLTALG 256
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 23/265 (8%)
Query: 124 PLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LP +L +++FS LD +LC A +N A+D + IDL V VV +
Sbjct: 14 KLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENIS 73
Query: 184 HRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRS 243
R G L+ L L G S SL +N ++ + N + L+R
Sbjct: 74 KRCGGFLRKLSLRGCIGVGDS-----SLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRF 128
Query: 244 CLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMS 303
C S L+ L L + + N+SL C +L L + + + +
Sbjct: 129 C------------SKLKHLDLTSCVSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEA 176
Query: 304 VSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPDYKIRILLK 362
+ C L+ L D++LK N C L S+ L+ ++ D + + +
Sbjct: 177 LVRGCRGLKALLLRGCTQLEDEALKH-----IQNYCHELVSLNLQSCSRITDEGVVQICR 231
Query: 363 GFRKLKYVDFSTSYSITGAFLRNLG 387
G +L+ + S ++T A L LG
Sbjct: 232 GCHRLQALCLSGCSNLTDASLTALG 256
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP ++ +KVFS LDT++LC +A C ++ A+D + +DL T V AVV +
Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQRDVKTAVVENLAR 119
Query: 185 RAGKSLQSLKL 195
R G L+ L L
Sbjct: 120 RCGGFLKELSL 130
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 101/264 (38%), Gaps = 23/264 (8%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L +++FS LD +LC A +N A+D + IDL V VV +
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQTDVEGRVVENISK 74
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R G L+ L L G S SL +N ++ + N + L+R C
Sbjct: 75 RCGGFLRKLSLRGCIGVGDS-----SLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFC 129
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
S L+ L L + + N+SL C L L + + + ++
Sbjct: 130 ------------SKLKHLDLTSCVSITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEAL 177
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPDYKIRILLKG 363
C L L D++LK N C L S+ L+ ++ D + L +G
Sbjct: 178 VRGCRGLRALLLRGCTQLEDEALKH-----IQNYCHELVSLNLQSCSRVTDDGVVQLCRG 232
Query: 364 FRKLKYVDFSTSYSITGAFLRNLG 387
+L+ + S S+T A L L
Sbjct: 233 CPRLQALCLSGCGSLTDASLTALA 256
>sp|Q9SMU1|FDL19_ARATH Putative F-box/FBD/LRR-repeat protein At3g49040 OS=Arabidopsis
thaliana GN=At3g49040 PE=4 SV=2
Length = 415
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 259 LRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFES 318
LR+LHLY + S+ L CPSL DL IV + R+ + + +++ P LERL E
Sbjct: 163 LRKLHLYKVHFYGKDSVYNLLCGCPSLRDL-IVHRY---RECMETFTIAVPSLERLTIED 218
Query: 319 SKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK 351
S G C +V N P+L + +R FK
Sbjct: 219 SGFGYG------CC--YVINAPSLKYLNIRRFK 243
>sp|Q8CAT8|FBX48_MOUSE F-box only protein 48 OS=Mus musculus GN=Fbxo48 PE=2 SV=1
Length = 161
Score = 43.9 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 98 KVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFN 153
K+ L SA K S NF+ LP ++T K+FS LD QSLC A+ TC+ +N
Sbjct: 12 KIPGTELNSADAERGKEESQRNFVEL-LPLEVTYKIFSQLDIQSLCRASRTCTGWN 66
>sp|Q9UF56|FXL17_HUMAN F-box/LRR-repeat protein 17 OS=Homo sapiens GN=FBXL17 PE=2 SV=3
Length = 701
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 40/256 (15%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAA-TCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LPP + +K+FS L C +A+ C + +D + +DL + V ++
Sbjct: 324 LPPSILLKIFSNLSLDERCLSASLVCKYWRDLCLDFQFWKQLDLSS-----RQQVTDELL 378
Query: 184 HR-AGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFS------WNDKKTRQGKE 236
+ A +S +++ I C+S+ N V V +F + + +Q +
Sbjct: 379 EKIASRSQNIIEINIS--------DCRSMS---DNGVCVLAFKCPGLLRYTAYRCKQLSD 427
Query: 237 SFILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVE 296
+ I+ + PL L+++H+ N +++ + L S C L D+ +
Sbjct: 428 TSIIAVASHCPL----------LQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKI 477
Query: 297 LRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYK 356
+ ++ ++ C L+R++ + +K D S+K+ F +CP L + G +
Sbjct: 478 SDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKA-----FAEHCPELQYVGFMGCSVTSKG 532
Query: 357 IRILLKGFRKLKYVDF 372
+ I L R L +D
Sbjct: 533 V-IHLTKLRNLSSLDL 547
>sp|Q9QZN1|FXL17_MOUSE F-box/LRR-repeat protein 17 OS=Mus musculus GN=Fbxl17 PE=2 SV=3
Length = 701
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 105/250 (42%), Gaps = 28/250 (11%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAA-TCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMI 183
LPP + +K+FS L C +A+ C + +D + +DL + V ++
Sbjct: 324 LPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQLDLSS-----RQQVTDELL 378
Query: 184 HR-AGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTR 242
+ A +S +++ I + S L + + +++ + +Q ++ I+
Sbjct: 379 EKIASRSQNIIEINISDCRSLSDSGVCVLAFKCPGLLRYTAY-----RCKQLSDTSIIAV 433
Query: 243 SCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLM 302
+ PL L+++H+ N +++ + L S C L D+ + + ++
Sbjct: 434 ASHCPL----------LQKVHVGNQDKLTDEGLKQLGSRCRELKDIHFGQCYKISDEGMI 483
Query: 303 SVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIRILLK 362
++ SC L+R++ + +K D S+K+ F +CP L + G + + I L
Sbjct: 484 VIAKSCLKLQRIYMQENKLVTDQSVKA-----FAEHCPELQYVGFMGCSVTSKGV-IHLT 537
Query: 363 GFRKLKYVDF 372
R L +D
Sbjct: 538 KLRNLSSLDL 547
>sp|Q5FWF7|FBX48_HUMAN F-box only protein 48 OS=Homo sapiens GN=FBXO48 PE=2 SV=1
Length = 155
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 97 IKVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFN 153
++VS S K S +NF LP ++T K+FS LD +SLC A+ TC +N
Sbjct: 11 LRVSHTEANSVDAEKEKNESQNNFFE-LLPAEITFKIFSQLDIRSLCRASLTCRSWN 66
>sp|Q9SMU0|FDL18_ARATH Putative F-box/FBD/LRR-repeat protein At3g49030 OS=Arabidopsis
thaliana GN=At3g49030 PE=2 SV=1
Length = 443
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 95/246 (38%), Gaps = 28/246 (11%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNK-FAMDPLCYANIDLRTVVPKVNNA----VV 179
LP DL +++ S + T+++ + + + M P + T PK + +
Sbjct: 26 LPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDF---TFDPKYHQTFSENLY 82
Query: 180 STMIHRAGKSLQSLKLGI---VPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKE 236
++ L+SL+L + G W + V +R V VS DK+ R
Sbjct: 83 RSLTSHEASVLESLQLNFTRGIDGLNIGMWIATAYVRHVRKLVLVSFGDVRDKRARFRSA 142
Query: 237 SF-------ILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLE 289
F IL L S LR L LY + D AS+ L CPS LE
Sbjct: 143 LFNFNDTLDILEIQDYILLDLPSPVCLKSLRELRLYEVHFKDEASVCNLLCGCPS---LE 199
Query: 290 IVGLHVELRQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRG 349
++ +H E + + ++ P L+RL G +V N P+L + + G
Sbjct: 200 VLSVHRERNVDVETFTIVVPSLQRLTIYDFCIGGGKG-------GYVINAPSLKYLNIVG 252
Query: 350 FKLPDY 355
F+ D+
Sbjct: 253 FEGLDF 258
>sp|Q0VD31|FBXL4_BOVIN F-box/LRR-repeat protein 4 OS=Bos taurus GN=FBXL4 PE=2 SV=1
Length = 621
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 110/286 (38%), Gaps = 52/286 (18%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L + + L LC A TC + N+ DPL Y +++L+ K+N+ + +
Sbjct: 283 LPYELIQLILNHLTLPDLCRLAQTCKLLNQHCCDPLQYIHLNLQPYWAKLNDTSLEFLQA 342
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R +Q L L W+ R + V+ FS F+
Sbjct: 343 RC-TLVQWLNLS---------WTGN------RGFISVAGFS-----------RFL----- 370
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
GS L RL L ++ L + CP+L DL + Q +
Sbjct: 371 --------KVCGSELVRLELSCSHFLNETCLEIISEMCPNLQDLNLSSCDKLPPQAFSHI 422
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRG-FKLPDYKIRILLKG 363
+ C L+RL +K + L +N C +L ++L + DY + + G
Sbjct: 423 AKLCG-LKRLVLYRTKVEQTALL------SILNFCSDLQHLSLGSCVMIEDYDVTASMIG 475
Query: 364 --FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLK 407
+KL+ +D +IT + + L SG LLE L L C L+
Sbjct: 476 AKCKKLRTLDLWRCKNITESGIAELASGCP--LLEELDLGWCPTLQ 519
>sp|Q86XK2|FBX11_HUMAN F-box only protein 11 OS=Homo sapiens GN=FBXO11 PE=1 SV=3
Length = 927
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 120 FLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCY 162
+L LP ++ +K+FS L Q LC AA C F++ A DP+ +
Sbjct: 154 YLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILW 196
>sp|Q7TPD1|FBX11_MOUSE F-box only protein 11 OS=Mus musculus GN=Fbxo11 PE=2 SV=2
Length = 843
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 120 FLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCY 162
+L LP ++ +K+FS L Q LC AA C F++ A DP+ +
Sbjct: 70 YLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILW 112
>sp|Q7TSL3|FBX11_RAT F-box only protein 11 OS=Rattus norvegicus GN=Fbxo11 PE=2 SV=1
Length = 843
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 120 FLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCY 162
+L LP ++ +K+FS L Q LC AA C F++ A DP+ +
Sbjct: 70 YLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILW 112
>sp|P39014|MET30_YEAST F-box protein MET30 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=MET30 PE=1 SV=1
Length = 640
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDP-----LCYANIDLR 168
LP +L++K+ S LD QSLC+A C + K A D +C +ID +
Sbjct: 187 LPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDRVWYHMCEQHIDRK 235
>sp|Q9SMT9|FBD9_ARATH FBD-associated F-box protein At3g49020 OS=Arabidopsis thaliana
GN=At3g49020 PE=2 SV=1
Length = 447
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 259 LRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFES 318
LR+L+LY++ D S+ L CPSL DL + H + S +++ P L+RL
Sbjct: 170 LRKLYLYHVRFNDEESVCNLLCGCPSLEDLVV---HRHSTTDVESYTIAVPSLQRLTIYD 226
Query: 319 SKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF 350
G +V N P+L + + GF
Sbjct: 227 DYYGEGVG-------GYVINAPSLKYLNIDGF 251
>sp|B6GZA1|SCONB_PENCW Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=sconB PE=3 SV=1
Length = 673
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 119 NFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNN 176
+FLA LPP+L+ K+ LDT SLC AA + A D + + + + + K N
Sbjct: 166 DFLA-ALPPELSFKILRYLDTASLCRAAQVSPRWRALADDDVVWHRMCEQHIRRKCNK 222
>sp|B8NGT5|SCONB_ASPFN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 /
NRRL 3357 / JCM 12722 / SRRC 167) GN=sconB PE=3 SV=1
Length = 706
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 51 PSMDNLLETLLNLADSPPSLSIDVSF-ERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKR 109
PSMD L L L PPS ++ L +AP + LI + I + +
Sbjct: 139 PSMDKLQRELETL---PPSDQQGIAHVWSLFSAAPAKHRK--LILQGIMAQCCFPQLSFV 193
Query: 110 SARKRA-SHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANI 165
SA R +FL LPP+++ K+ LDT SLC AA S + A D + + +
Sbjct: 194 SATVRDLIRIDFLT-ALPPEISFKILCYLDTTSLCKAAQVSSRWRALADDDVVWHRM 249
>sp|Q2UFN8|SCONB_ASPOR Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sconB PE=3 SV=1
Length = 705
Score = 36.6 bits (83), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 51 PSMDNLLETLLNLADSPPSLSIDVSF-ERLLDSAPGDEDQSHLIDRAIKVSSLLLESAKR 109
PSMD L L L PPS ++ L +AP + LI + I + +
Sbjct: 138 PSMDKLQRELETL---PPSDQQGIAHVWSLFSAAPAKHRK--LILQGIMAQCCFPQLSFV 192
Query: 110 SARKRA-SHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANI 165
SA R +FL LPP+++ K+ LDT SLC AA S + A D + + +
Sbjct: 193 SATVRDLIRIDFLT-ALPPEISFKILCYLDTTSLCKAAQVSSRWRALADDDVVWHRM 248
>sp|Q9LJF8|FBL47_ARATH F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana
GN=At3g26922 PE=2 SV=2
Length = 306
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 259 LRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV---SMSCPLLERLF 315
LR L L N++ + S+ LS CP+L +L V R L+ V +++ P L+RL
Sbjct: 163 LRTLRLENVDYKYDDSVYNLLSGCPNLENL------VVYRGNLLEVETFTIAVPSLQRL- 215
Query: 316 FESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFK 351
T DD+ C +V N P+L + + GFK
Sbjct: 216 -----TIYDDN-DGEYCTGYVINAPSLKYLKIDGFK 245
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDP-----LCYANIDLR 168
LPP+++ K+ S LDT SLC+AA + A D +C +ID +
Sbjct: 218 LPPEISFKILSYLDTASLCNAAQVSRNWRHLADDDVVWHRMCEQHIDRK 266
>sp|B8M7Q5|SCONB_TALSN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=sconB PE=3 SV=1
Length = 667
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 16/172 (9%)
Query: 2 DDALSVLLGVSTSTSASASASSSSSTTS----MAKRLCSSSTSQNPNITAKLN---PSMD 54
D+ ++ L + + + +S TT M R C P++ + PSMD
Sbjct: 65 DENIAPFLAKHIPSQYAPLGADASKTTGPPRPMNSRYC---YRHRPDLKCRRQADEPSMD 121
Query: 55 NLLETLLNLADSPPSLSIDVSFERLLDSAPGDEDQSHLIDRAIKVSSLLLE-SAKRSARK 113
+L L +L+ S V L +AP Q L+ R I + S S+ +
Sbjct: 122 HLQWELQSLSQSDQQGIAHVW--SLFSAAPAK--QRELMLRGILAQCCFPQLSLISSSVR 177
Query: 114 RASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANI 165
+F+ LPP+++ K+ S LDT SLC AA + A D + + +
Sbjct: 178 DLIRIDFIT-ALPPEISFKILSYLDTASLCRAAQVSRAWKCLADDDVVWHRM 228
>sp|Q9JIB3|BIR1G_MOUSE Baculoviral IAP repeat-containing protein 1g OS=Mus musculus GN=Naip7
PE=4 SV=1
Length = 1402
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 41/161 (25%)
Query: 299 QTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIR 358
++LM+ SC L + F S + + FVN PN S+ +
Sbjct: 1171 ESLMTALASCKKLREIEF---------SGQCFEAMTFVNILPNFVSLKI----------- 1210
Query: 359 ILLKGFRKLKYVDFSTSYSITGAF--LRNLG-----SGTGGNLLEVLILRDCMHLKEVEV 411
+ LKG ++ D TS A LRNL +G G + + LI+R C+ L + V
Sbjct: 1211 LSLKG---QQFADKETSEKFAQALGSLRNLEELLVPTGDGIHQVAKLIVRQCLQLPCLRV 1267
Query: 412 ARF-----------LTAVLTGDFKFLRHLDISNREGLASEG 441
F + A +G F+ L +LDIS + EG
Sbjct: 1268 LAFHDILDDESVIEIGAATSGSFQKLENLDISMNHKITEEG 1308
>sp|Q9R016|BIR1E_MOUSE Baculoviral IAP repeat-containing protein 1e OS=Mus musculus GN=Naip5
PE=1 SV=2
Length = 1403
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 48/165 (29%)
Query: 299 QTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIR 358
++LM+V SC L + F +GR + FVN PN S+ + K
Sbjct: 1171 ESLMAVLASCKKLREIEF----SGR-----CFEAMTFVNILPNFVSLKILNLK------- 1214
Query: 359 ILLKGFRKLKYVDFSTSYSITGAF--LRNLG-----SGTGGNLLEVLILRDCMHL----- 406
++ D TS A LRNL +G G + + LI+R C+ L
Sbjct: 1215 -------DQQFPDKETSEKFAQALGSLRNLEELLVPTGDGIHQVAKLIVRQCLQLPCLRV 1267
Query: 407 ----------KEVEVARFLTAVLTGDFKFLRHLDISNREGLASEG 441
+E+AR A +G F+ L +LDIS + EG
Sbjct: 1268 LTFHDILDDDSVIEIAR---AATSGGFQKLENLDISMNHKITEEG 1309
>sp|D4AM37|SCONB_ARTBC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS
112371) GN=sconB PE=3 SV=1
Length = 663
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDP-----LCYANIDLR 168
LPP+++ K+ S LDT SLC AA + A D +C +ID +
Sbjct: 201 LPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRK 249
>sp|D4D8P3|SCONB_TRIVH Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Trichophyton verrucosum (strain HKI 0517) GN=sconB
PE=3 SV=1
Length = 663
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDP-----LCYANIDLR 168
LPP+++ K+ S LDT SLC AA + A D +C +ID +
Sbjct: 201 LPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRK 249
>sp|O22161|ADLO1_ARATH Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1
Length = 930
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 83/201 (41%), Gaps = 25/201 (12%)
Query: 118 HNFLAW-PLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNN 176
H F+ W LP D +++F+ L+ + A+TC + + ++DLR P +
Sbjct: 42 HGFVDWISLPYDTVLQLFTCLNYRDRASLASTCKTWRCLGASSCLWTSLDLR---PHKFD 98
Query: 177 AVVSTMIHRAGKSLQSLKLGIVPGPTASPWSCQSLVY-TIRNSVDVSSFSWNDKKTRQGK 235
A ++ + +L L+ V S SL++ RN ++VS G
Sbjct: 99 ASMAASLASRCVNLHYLRFRGVE-------SADSLIHLKARNLIEVS-----------GD 140
Query: 236 ESFILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHV 295
+T + L+ + A SL +L ER+ + ++ CP L L + G+
Sbjct: 141 YCKKITDATLSMIVARHEALESL--QLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRD 198
Query: 296 ELRQTLMSVSMSCPLLERLFF 316
+ + +++ CP L L F
Sbjct: 199 VTSEAIEALAKHCPQLNDLGF 219
>sp|O23360|FBL93_ARATH Putative F-box/LRR-repeat protein At4g15060 OS=Arabidopsis thaliana
GN=At4g15060 PE=4 SV=2
Length = 426
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 42/210 (20%)
Query: 259 LRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFES 318
L+ L L + D+ SL LS+CP L +L + +TL S++ L+RL +
Sbjct: 180 LKYLLLKRVTYKDSNSLHQLLSSCPVLKNLVVERDEYNHDETL---SITVSSLQRLTLKI 236
Query: 319 SKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDY-----------KIRILLKGFRKL 367
S+ G D L V N P +L+ FKL DY + K KL
Sbjct: 237 SRGGSFDEL--------VINTP-----SLKYFKLTDYLGECETELDDDSYSYVFKDMPKL 283
Query: 368 KYVDFSTSYSITGAFLRNLGSGTGGNLL-----EVLILRDCMHLKEVEVARF-------- 414
+ ++Y G F+R++ S +L E + R+ + K++E +
Sbjct: 284 EEAHIDSTYPDIGKFVRSITSVKRLSLCVKVNAEEALYREGICFKQLEHLKLCPCDSNWS 343
Query: 415 -LTAVLTGDFKFLRHLDIS-NREGLASEGD 442
L A L D LR L+I N++ AS D
Sbjct: 344 KLLARLLKDSPNLRELEIKLNKDHKASFDD 373
>sp|B6Q4Z5|SCONB_PENMQ Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59
/ QM 7333) GN=sconB PE=3 SV=1
Length = 660
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANI 165
LPP+++ K+ S LDT SLC AA + A D + + +
Sbjct: 181 LPPEISFKILSYLDTASLCRAAQVSRGWKCLADDDVVWHRM 221
>sp|Q09299|YQOA_CAEEL Putative RNA-binding protein EEED8.10 OS=Caenorhabditis elegans
GN=EEED8.10 PE=4 SV=3
Length = 738
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 255 AGSLLRRLHLYNIERM--DNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLE 312
AG+ LR L + I + D +L + + CP+L+DL+I G H + + L + S LE
Sbjct: 312 AGAHLRSLDVSGIVHLLDDRRALKVIATCCPNLVDLDISGTHAQA-EALEELGESLSHLE 370
Query: 313 RLFFESSKTGRDDSL 327
+L + +T D +
Sbjct: 371 QLSYRGMETTGDKAF 385
>sp|Q9JIB6|BIR1F_MOUSE Baculoviral IAP repeat-containing protein 1f OS=Mus musculus GN=Naip6
PE=1 SV=2
Length = 1403
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 66/165 (40%), Gaps = 48/165 (29%)
Query: 299 QTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGFKLPDYKIR 358
++LM+ SC L + F S + + FVN PN S+ +
Sbjct: 1171 ESLMTALASCKKLREIEF---------SGQCFEAMTFVNILPNFVSLKI----------- 1210
Query: 359 ILLKGFRKLKYVDFSTSYSITGAF--LRNLG-----SGTGGNLLEVLILRDCMHL----- 406
+ LKG ++ D TS A LRNL +G G + + LI+R C+ L
Sbjct: 1211 LSLKG---QQFADKETSEKFAQALGSLRNLEELLVPTGDGIHQVAKLIVRQCLQLPCLRV 1267
Query: 407 ----------KEVEVARFLTAVLTGDFKFLRHLDISNREGLASEG 441
+E+AR A +G F+ L +LDIS + EG
Sbjct: 1268 LAFHDILDDESVIEIAR---AATSGSFQKLENLDISMNHKITEEG 1309
>sp|Q5MJ12|FXL16_RAT F-box/LRR-repeat protein 16 OS=Rattus norvegicus GN=Fbxl16 PE=2
SV=1
Length = 479
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 333 VDFVNNCPNLTSMALRGF-KLPDYKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTG 391
V+ V++ PNLTS++L G K+ D + ++ + RKL+ +D S IT L +
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDL- 371
Query: 392 GNLLEVLILRDCMHLKEVEVARFLT 416
+ LE L+L C+ + + ++ T
Sbjct: 372 -HRLEELVLDRCVRITDTGLSYLST 395
>sp|A2RT62|FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mus musculus GN=Fbxl16 PE=2 SV=1
Length = 479
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 333 VDFVNNCPNLTSMALRGF-KLPDYKIRILLKGFRKLKYVDFSTSYSITGAFLRNLGSGTG 391
V+ V++ PNLTS++L G K+ D + ++ + RKL+ +D S IT L +
Sbjct: 313 VNVVHSLPNLTSLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDL- 371
Query: 392 GNLLEVLILRDCMHLKEVEVARFLT 416
+ LE L+L C+ + + ++ T
Sbjct: 372 -HRLEELVLDRCVRITDTGLSYLST 395
>sp|Q8BH70|FBXL4_MOUSE F-box/LRR-repeat protein 4 OS=Mus musculus GN=Fbxl4 PE=2 SV=1
Length = 621
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 111/293 (37%), Gaps = 52/293 (17%)
Query: 118 HNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNA 177
HN LP +L + + L LC A TC + ++ DPL Y +++L+ ++++
Sbjct: 276 HNGYFDKLPYELIQLILNHLSLPDLCRLAQTCRLLHQHCCDPLQYIHLNLQPYWARLDDT 335
Query: 178 VVSTMIHRAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKES 237
+ + R +Q L L W+ R + VS FS
Sbjct: 336 SLEFLQARC-VLVQWLNLS---------WTGN------RGFISVSGFS-----------R 368
Query: 238 FILTRSCLNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVEL 297
F+ GS L RL L +++ L + CP+L DL +
Sbjct: 369 FL-------------KVCGSELVRLELSCSHFLNDTCLEVISEMCPNLQDLNLSSCDKLP 415
Query: 298 RQTLMSVSMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRG-FKLPDYK 356
Q ++ C L+RL +K ++ + +N C L ++L + DY
Sbjct: 416 PQAFGHIAKLCS-LKRLVLYRTK------VEQTALLSILNFCAELQHLSLGSCVMIEDYD 468
Query: 357 IRILLKG--FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLK 407
+ + G + L+ +D +IT + L SG LLE L L C L+
Sbjct: 469 VIASMIGAKCKNLRTLDLWRCKNITENGIAELASGCV--LLEELDLGWCPTLQ 519
>sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana
GN=At1g67190 PE=2 SV=1
Length = 419
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 275 LSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFE 317
L++ LSACP + LE+V L + + +++ +S P L+ ++F+
Sbjct: 166 LNLLLSACPMIESLELVSLEIAMSDAQVTIELSSPTLKSVYFD 208
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 98 KVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAM 157
+++ L+ A R +++AS LP +++FS L T LC A C + A
Sbjct: 95 RLTHPLIRLASRPQKEQASIDR-----LPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAW 149
Query: 158 DPLCYANIDLRTVVPKVNNAV 178
DP + I L V+ A+
Sbjct: 150 DPRLWRTIRLTGETINVDRAL 170
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 250 GESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCP 309
G +G G + N ++ + L +CPSL L + + L+ ++ C
Sbjct: 144 GTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIAEGCA 203
Query: 310 LLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRGF-KLPDYKIRILLKGFRKLK 368
LE+L T D L V +CPNLT + L ++ D + + + KLK
Sbjct: 204 QLEKLELNRCSTITDKGL-----VAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLK 258
Query: 369 YV 370
V
Sbjct: 259 SV 260
>sp|Q6BIN3|AMN1_DEBHA Antagonist of mitotic exit network protein 1 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=AMN1 PE=3 SV=2
Length = 536
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 19/149 (12%)
Query: 209 QSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSCLNPLSGESGAAGSLLRRLHLYNIE 268
Q ++ I++ +D S+ W E ++ + P E + G+ ++++ + +
Sbjct: 276 QDIIELIKSHMDFSNLQW--------LEFYMCPKLLPTP---EFLSCGTKIKKIVITGSK 324
Query: 269 RMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFESSKTGR---DD 325
+D+ LSM CP+L L+I + + ++ C L + F G D
Sbjct: 325 VIDDGFLSMVAKKCPNLEVLDIRACELISDSGIYQIAKRCTKLTTVNFGRKNKGNLITDS 384
Query: 326 SLKSPTCVDFVNNCPNLTSMALRGFKLPD 354
S+ C+ + N PNL ++ L G + D
Sbjct: 385 SI----CI-LIRNNPNLKTVGLAGCHITD 408
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 98 KVSSLLLESAKRSARKRASHHNFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAM 157
+++ L+ A R +++AS LP +++FS L T LC A C + A
Sbjct: 95 RLTHPLIRLASRPQKEQASIDR-----LPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAW 149
Query: 158 DPLCYANIDLRTVVPKVNNAV 178
DP + I L V+ A+
Sbjct: 150 DPRLWRTIRLTGETINVDRAL 170
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 270 MDNASLSMALSACPSLLDLEIVGLHVELRQTLMSVSMSCPLLERLFFESSKTGRDDSLK- 328
+ +++S A+ CP L L+I H L + S ++SCP LE L + D++L+
Sbjct: 356 LKRSNMSQAMLNCPLLQLLDIASCHKLLDAAIRSAAISCPQLESLDVSNCSCVSDETLRE 415
Query: 329 -SPTCVDF----VNNCPNLTSMALRGFKLP 353
+ C + + CPN++ L LP
Sbjct: 416 IAQACANLHILNASYCPNIS---LESVHLP 442
>sp|Q9P7W4|POF10_SCHPO F-box/WD repeat-containing protein pof10 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof10 PE=1 SV=1
Length = 662
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 108 KRSARKRASHH-NFLAWPLPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCY 162
+R R +S++ N LP ++ I +FS LD +SL A TC + K D L +
Sbjct: 16 RRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71
>sp|Q9UKA2|FBXL4_HUMAN F-box/LRR-repeat protein 4 OS=Homo sapiens GN=FBXL4 PE=1 SV=2
Length = 621
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 107/286 (37%), Gaps = 52/286 (18%)
Query: 125 LPPDLTIKVFSMLDTQSLCHAAATCSMFNKFAMDPLCYANIDLRTVVPKVNNAVVSTMIH 184
LP +L + + L LC A TC + ++ DPL Y +++L+ K+++ + +
Sbjct: 283 LPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQS 342
Query: 185 RAGKSLQSLKLGIVPGPTASPWSCQSLVYTIRNSVDVSSFSWNDKKTRQGKESFILTRSC 244
R +Q L L W+ R + V+ FS F+
Sbjct: 343 RC-TLVQWLNLS---------WTGN------RGFISVAGFS-----------RFL----- 370
Query: 245 LNPLSGESGAAGSLLRRLHLYNIERMDNASLSMALSACPSLLDLEIVGLHVELRQTLMSV 304
GS L RL L ++ L + CP+L L + Q +
Sbjct: 371 --------KVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFNHI 422
Query: 305 SMSCPLLERLFFESSKTGRDDSLKSPTCVDFVNNCPNLTSMALRG-FKLPDYKIRILLKG 363
+ C L+RL +K + L +N C L ++L + DY + + G
Sbjct: 423 AKLCS-LKRLVLYRTKVEQTALL------SILNFCSELQHLSLGSCVMIEDYDVIASMIG 475
Query: 364 --FRKLKYVDFSTSYSITGAFLRNLGSGTGGNLLEVLILRDCMHLK 407
+KL+ +D +IT + L SG LLE L L C L+
Sbjct: 476 AKCKKLRTLDLWRCKNITENGIAELASGCP--LLEELDLGWCPTLQ 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,278,406
Number of Sequences: 539616
Number of extensions: 7434688
Number of successful extensions: 35538
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 30793
Number of HSP's gapped (non-prelim): 3073
length of query: 547
length of database: 191,569,459
effective HSP length: 123
effective length of query: 424
effective length of database: 125,196,691
effective search space: 53083396984
effective search space used: 53083396984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)